SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,47353,109640,_gap_,57667,57667,57667 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47353 - Retrovirus capsid dimerization domain-like
109640 - KRAB domain (Kruppel-associated box)
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers
57667 - beta-beta-alpha zinc fingers

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

24 sequences contain the _gap_,47353,109640,_gap_,57667,57667,57667 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Echinops telfairi 76: ENSETEP00000003286

Echinops telfairi 76: ENSETEP00000006702

Erinaceus europaeus 76: ENSEEUP00000007958

Sorex araneus 76_1: ENSSARP00000001301

Pteropus vampyrus 76_1: ENSPVAP00000011855

Pteropus vampyrus 76_1: ENSPVAP00000009108

Vicugna pacos 76_1: ENSVPAP00000003467

Sus scrofa 76_10.2: ENSSSCP00000029420

Ochotona princeps 76: ENSOPRP00000006766

Heterocephalus glaber v1.7-2: HGL_H00000409872-2

Callithrix jacchus 76_3.2.1: ENSCJAP00000025385

Macaca mulatta 76_1: ENSMMUP00000040806

Macaca mulatta 76_1: ENSMMUP00000012136

Papio anubis 76: ENSPANP00000000425

Nomascus leucogenys 76_1.0: ENSNLEP00000021208

Tarsius syrichta 76_1: ENSTSYP00000013137

Pongo abelii 76_2: ENSPPYP00000004043

Gorilla gorilla 76_3.1: ENSGGOP00000003768

Pan troglodytes 76_2.1.4: ENSPTRP00000005789

Homo sapiens 76_38: ENSP00000278319

Homo sapiens 76_38: ENSP00000393202

Homo sapiens 76_38: ENSP00000359800

Homo sapiens 76_38: ENSP00000409872

Homo sapiens 76_38: ENSP00000321209