SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,49854,57424,57424,49854,_gap_,57424,57424,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module
49854 - Spermadhesin, CUB domain
57424 - LDL receptor-like module
57424 - LDL receptor-like module

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

25 sequences contain the _gap_,49854,57424,57424,49854,_gap_,57424,57424,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Saccoglossus kowalevskii v3.0: Sakowv30020525m

Dasypus novemcinctus 76_2: ENSDNOP00000031042

Pteropus vampyrus 76_1: ENSPVAP00000010942

Myotis lucifugus 76_2.0: ENSMLUP00000011105

Ailuropoda melanoleuca 76_1: ENSAMEP00000008752

Mustela putorius furo 76_1.0: ENSMPUP00000007553

Bos taurus 76_3.1: ENSBTAP00000054071

Sus scrofa 76_10.2: ENSSSCP00000003083

Sus scrofa 76_10.2: ENSSSCP00000026811

Oryctolagus cuniculus 76_2: ENSOCUP00000008140

Cavia porcellus 76_3: ENSCPOP00000012349

Heterocephalus glaber v1.7-2: HGL_H00000253193

Ictidomys tridecemlineatus 76_2: ENSSTOP00000008470

Mus musculus 76_38: ENSMUSP00000114026

Mus musculus 76_38: ENSMUSP00000113406

Rattus norvegicus 76_5.0: ENSRNOP00000015384

Callithrix jacchus 76_3.2.1: ENSCJAP00000041981

Macaca mulatta 76_1: ENSMMUP00000030121

Papio anubis 76: ENSPANP00000010052

Nomascus leucogenys 76_1.0: ENSNLEP00000009338

Pongo abelii 76_2: ENSPPYP00000011003

Gorilla gorilla 76_3.1: ENSGGOP00000005950

Gorilla gorilla 76_3.1: ENSGGOP00000028374

Pan troglodytes 76_2.1.4: ENSPTRP00000018497

Homo sapiens 76_38: ENSP00000253193