SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54236,_gap_,54236,49879,_gap_,50156,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54236 - Ubiquitin-like
54236 - Ubiquitin-like
49879 - SMAD/FHA domain
50156 - PDZ domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

58 sequences contain the _gap_,54236,_gap_,54236,49879,_gap_,50156,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Acropora digitifera v1.0: adi_v1.11516

Caenorhabditis elegans 76_235: W03F11.6d

Caenorhabditis elegans 76_235: W03F11.6c

Caenorhabditis elegans 76_235: W03F11.6a

Brugia malayi WS250: Bm6167a

Ixodes scapularis : ISCW019802-PA

Strigamia maritima 22: SMAR004706-PA

Anopheles gambiae 49_3j: AGAP004039-PA

Aedes aegypti 55: AAEL004393-PA

Drosophila mojavensis 1.3: FBpp0159436

Drosophila virilis 1.2: FBpp0225437

Drosophila ananassae 1.3: FBpp0119262

Drosophila erecta 1.3: FBpp0129735

Drosophila melanogaster 76_5: FBpp0288988

Drosophila melanogaster 76_5: FBpp0288987

Drosophila melanogaster 76_5: FBpp0289752

Drosophila sechellia 1.3: FBpp0192136

Drosophila persimilis 1.3: FBpp0186306

Drosophila pseudoobscura 2.13: FBpp0284459

Drosophila willistoni 1.3: FBpp0243433

Drosophila grimshawi 1.3: FBpp0156670

Linepithema humile v1.1: LH16941-PA

Harpegnathos saltator v3.3: Hsal_01316--XP_393645.3_APIME

Nasonia vitripennis : gi|156544113|ref|XP_001605722.1|

Lottia gigantea : jgi|Lotgi1|210615|estExt_Genewise1Plus.C_sca_60354

Crassostrea gigas 22: EKC42518

Adineta vaga: GSADVT00018112001

Danio rerio 76_9: ENSDARP00000111104

Danio rerio 76_9: ENSDARP00000127130

Astyanax mexicanus 76: ENSAMXP00000018401

Oreochromis niloticus 76_1.0: ENSONIP00000019798

Takifugu rubripes 76_4: ENSTRUP00000014198

Takifugu rubripes 76_4: ENSTRUP00000014200

Takifugu rubripes 76_4: ENSTRUP00000014201

Tetraodon nigroviridis 76_8: ENSTNIP00000022337

Lepisosteus oculatus 76: ENSLOCP00000019391

Lepisosteus oculatus 76: ENSLOCP00000019393

Latimeria chalumnae 76_1: ENSLACP00000015429

Xenopus laevis : gi|292606973|gb|ADE34165|

Xenopus laevis : gi|296010945|ref|NP_001171575|

Anolis carolinensis 76_2.0: ENSACAP00000008247

Anolis carolinensis 76_2.0: ENSACAP00000022051

Taeniopygia guttata 76_3.2.4: ENSTGUP00000009929

Gallus gallus 76_4: ENSGALP00000018461

Meleagris gallopavo 76_2: ENSMGAP00000012924

Sus scrofa 76_10.2: ENSSSCP00000004342

Cavia porcellus 76_3: ENSCPOP00000007433

Mus musculus 76_38: ENSMUSP00000118318

Mus musculus 76_38: ENSMUSP00000119153

Mus musculus 76_38: ENSMUSP00000114485

Mus musculus 76_38: ENSMUSP00000122447

Mus musculus 76_38: ENSMUSP00000128891

Homo sapiens 76_38: ENSP00000341118

Homo sapiens 76_38: ENSP00000252692

Homo sapiens 76_38: ENSP00000375956

Homo sapiens 76_38: ENSP00000404595

Homo sapiens 76_38: ENSP00000383623

Homo sapiens 76_38: ENSP00000375960