SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,56091,50249,52113,_gap_,52113 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56091 - DNA ligase/mRNA capping enzyme, catalytic domain
50249 - Nucleic acid-binding proteins
52113 - BRCT domain
52113 - BRCT domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

19 sequences contain the _gap_,56091,50249,52113,_gap_,52113 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Pythium ultimum v1.7-2: PYU1_T002276

Pythium iwayamai DAOM BR242034 22: EPrPW00000014369

Bigelowiella natans CCMP2755 22: JGI_V11_49125

Schizosaccharomyces cryophilus OY26 22: EPY49906

Saccharomyces mikatae MIT: ORFP:19261

Candida lusitaniae ATCC 42720 : CLUT_01056

Wickerhamomyces anomalus: jgi|Wican1|27446|e_gw1.1.675.1

Debaromyces hansenii: gnl|GLV|DEHA2G04224g

Glomerella graminicola 22: EFQ25171

Tulasnella calospora AL13/4D v1.0: jgi|Tulca1|20824|gm1.4379_g

Cronartium quercuum f. sp. fusiforme G11 v1.0: jgi|Croqu1|656279|fgenesh1_kg.42_#_73_#_Locus10433v1rpkm6.46

Sphaeroforma arctica JP610 : SARC_04486T0

Daphnia pulex : jgi|Dappu1|323605|NCBI_GNO_5500022

Drosophila persimilis 1.3: FBpp0186527

Camponotus floridanus v3.3: Cflo_09525--XP_001122279.1_APIME

Acromyrmex echinatior v3.8: Aech_07593

Strongylocentrotus purpuratus v3.1: SPU_018243

Vicugna pacos 76_1: ENSVPAP00000002099

Homo sapiens 76_38: ENSP00000480814