SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for _gap_,57424,57424,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57424 - LDL receptor-like module
57424 - LDL receptor-like module

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

63 sequences contain the _gap_,57424,57424,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Acropora digitifera v1.0: adi_v1.19410

Acropora digitifera v1.0: adi_v1.16329

Mnemiopsis leidyi: ML004439a-PA

Mnemiopsis leidyi: ML00541a-PA

Mnemiopsis leidyi: ML106613a-PA

Mnemiopsis leidyi: ML11228a-PA

Mnemiopsis leidyi: ML14764a-PA

Echinococcus granulosus : EgrG_000094900.1

Echinococcus multilocularis : EmuJ_000094900.1

Hymenolepis microstoma : HmN_000854900.1

Meloidogyne hapla : MhA1_Contig1797.frz3.gene10

Tetranychus urticae : tetur01g08860

Tetranychus urticae : tetur08g01870

Tetranychus urticae : tetur15g03220

Tetranychus urticae : tetur26g00440

Sarcoptes scabiei: SSCA004096-PA

Daphnia pulex : jgi|Dappu1|334828|NCBI_GNO_41900003

Daphnia pulex : jgi|Dappu1|332908|NCBI_GNO_21200002

Culex pipiens quinquefasciatus : CPIJ016346|conserved

Drosophila melanogaster 76_5: FBpp0112297

Drosophila pseudoobscura 2.13: FBpp0273604

Acromyrmex echinatior v3.8: Aech_06211

Pogonomyrmex barbatus v1.2: pbar_krimp-1

Linepithema humile v1.1: LH17360-PA

Capitella sp. I : jgi|Capca1|225161|estExt_fgenesh1_pg.C_8710002

Helobdella robusta : jgi|Helro1|191433

Adineta vaga: GSADVT00058849001

Adineta vaga: GSADVT00049108001

Adineta vaga: GSADVT00002081001

Strongylocentrotus purpuratus v3.1: SPU_004355

Strongylocentrotus purpuratus v3.1: SPU_013914

Ciona intestinalis 76: ENSCINP00000035045

Lepisosteus oculatus 76: ENSLOCP00000003766

Xenopus tropicalis 76_4.2: ENSXETP00000063177

Anolis carolinensis 76_2.0: ENSACAP00000013825

Pelodiscus sinensis 76_1.0: ENSPSIP00000003066

Anas platyrhynchos 76_1.0: ENSAPLP00000001998

Gallus gallus 76_4: ENSGALP00000032390

Meleagris gallopavo 76_2: ENSMGAP00000011850

Petromyzon marinus 76_7.0: ENSPMAP00000009913

Saccoglossus kowalevskii v3.0: Sakowv30018245m

Saccoglossus kowalevskii v3.0: Sakowv30037800m

Saccoglossus kowalevskii v3.0: Sakowv30037801m

Dasypus novemcinctus 76_2: ENSDNOP00000004087

Echinops telfairi 76: ENSETEP00000010598

Loxodonta africana 76_3: ENSLAFP00000019000

Procavia capensis 76_1: ENSPCAP00000005095

Erinaceus europaeus 76: ENSEEUP00000012196

Pteropus vampyrus 76_1: ENSPVAP00000009086

Felis catus 76_6.2: ENSFCAP00000007163

Canis familiaris 76_3.1: ENSCAFP00000027305

Tursiops truncatus 76_1: ENSTTRP00000009117

Ovis aries 76_3.1: ENSOARP00000003919

Bos taurus 76_3.1: ENSBTAP00000005777

Dipodomys ordii 76_1: ENSDORP00000011583

Mus musculus 76_38: ENSMUSP00000092521

Mus musculus 76_38: ENSMUSP00000106853

Callithrix jacchus 76_3.2.1: ENSCJAP00000019719

Macaca mulatta 76_1: ENSMMUP00000021947

Nomascus leucogenys 76_1.0: ENSNLEP00000001839

Gorilla gorilla 76_3.1: ENSGGOP00000000911

Pan troglodytes 76_2.1.4: ENSPTRP00000017725

Homo sapiens 76_38: ENSP00000301458