SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57802,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57802 - Rubredoxin-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

314 sequences contain the _gap_,57802,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Prochlorococcus marinus str. MIT 9515: gi|123965563|ref|YP_001010644.1|

Synechococcus elongatus PCC 7942: gi|81299988|ref|YP_400196.1|

Synechococcus sp. CC9311: gi|113954739|ref|YP_729477.1|

Naegleria gruberi : jgi|Naegr1|79805|estExt_fgeneshNG_pg.C_240193

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.003185.t1|scaffold173.1|size339812|28

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.022944.t1|scaffold2067.1|size90749|4

Plasmodium berghei ANKA : PBANKA_082860

Plasmodium chabaudi : PCAS_082890

Plasmodium knowlesi strain H : PKH_072570

Plasmodium vivax SaI-1 7.0: gb|PVX_099830

Plasmodium falciparum 3D7 : PFI1365w

Theileria annulata: TA12915

Theileria parva : 526.m04910

Babesia bovis T2Bo : gi|154799471|gb|EDO08649.1|

Babesia bovis T2Bo : gi|156089621|ref|XP_001612217.1|

Toxoplasma gondii GT1: gb|TGGT1_022310

Toxoplasma gondii ME49: gb|TGME49_009260

Toxoplasma gondii VEG: gb|TGVEG_039200

Neospora caninum: psu|NCLIV_003650

Ichthyophthirius multifiliis strain G5 : gi|340505803|gb|EGR32106.1|

Tetrahymena thermophila SB210 1 : 40.m00201

Paramecium tetraurelia : GSPATP00006667001

Paramecium tetraurelia : GSPATP00039355001

Paramecium tetraurelia : PTETP1000006001

Paramecium tetraurelia : PTETP5900005001

Perkinsus marinus ATCC 50983 : gi|294933171|ref|XP_002780633.1|

Perkinsus marinus ATCC 50983 : gi|294881763|ref|XP_002769485.1|

Perkinsus marinus ATCC 50983 : gi|294874382|ref|XP_002766928.1|

Thalassiosira pseudonana CCMP1335: jgi|Thaps3|263116|thaps1_ua_kg.chr_7000073

Pythium arrhenomanes ATCC 12531 22: EPrPR00000020507

Ectocarpus siliculosus: Esi0170_0044

Ectocarpus siliculosus: Esi0263_0017

Leishmania infantum JPCM5 2.4: psu|LinJ09_V3.1340

Leishmania major strain Friedlin : psu|LmjF09.1280

Cyanophora paradoxa : ConsensusfromContig37194-maker-ConsensusfromContig37194-snap-gene-0.5-mRNA-1:cds:6692/904-1063:0:-

Bigelowiella natans CCMP2755 22: JGI_V11_47124

Bigelowiella natans CCMP2755 22: JGI_V11_51338

Porphyridium purpureum 02_2012: evm.model.contig_452.3

Porphyridium purpureum 02_2012: evm.model.contig_585.3

Cyanidioschyzon merolae: gnl|CMER|CMJ143C

Cyanidioschyzon merolae: gnl|CMER|CMS181C

Cyanidioschyzon merolae strain 10D 22: CMJ143CT

Cyanidioschyzon merolae strain 10D 22: CMS181CT

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|211514|estExt_fgenesh1_pm.C_1_t10281

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|184735|gm1.1856_g

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|67217|MicpuC2.est_orfs.4_6200_4271654:1

Micromonas pusilla CCMP1545 v3.0: jgi|MicpuC3|207551|fgenesh1_pm.17_#_44

Micromonas sp. RCC299 : jgi|MicpuN2|57089|EuGene.0300010517

Micromonas sp. RCC299 : jgi|MicpuN2|57283|EuGene.0300010711

Micromonas sp. RCC299 : jgi|MicpuN2|60047|EuGene.0700010332

Bathycoccus prasinos : Bathy03g05510

Ostreococcus tauri : jgi|Ostta4|30323|0100010311

Ostreococcus lucimarinus CCE9901 : jgi|Ost9901_3|31919|eugene.0500010456

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|187882|estExt_fgenesh2_pg.C_20102

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|182463|estExt_fgenesh2_kg.C_60058

Volvox carteri v199: Vocar20006832m|PACid:23138582

Volvox carteri v199: Vocar20012885m|PACid:23129687

Volvox carteri v199: Vocar20009874m|PACid:23126049

Volvox carteri v199: Vocar20009875m|PACid:23126050

Volvox carteri v199: Vocar20000500m|PACid:23131598

Volvox carteri f. nagariensis : jgi|Volca1|82726|estExt_Genewise1Plus.C_410087

Volvox carteri f. nagariensis : jgi|Volca1|108517|estExt_fgenesh4_pg.C_1290002

Chlorella vulgaris : jgi|Chlvu1|28027|e_gw1.5.429.1

Coccomyxa subellipsoidea sp. C-169 v2: jgi|Coc_C169_1|14465|e_gw1.5.525.1

Physcomitrella patens: jgi|Phypa1_1|161132|estExt_fgenesh1_pg.C_300060

Physcomitrella patens: jgi|Phypa1_1|163749|estExt_fgenesh1_pg.C_590188

Amborella trichopoda 22: ERN02041

Amborella trichopoda 22: ERN03560

Amborella trichopoda 22: ERN06124

Musa acuminata 22: GSMUA_Achr10P12180_001

Musa acuminata 22: GSMUA_Achr7P09960_001

Musa acuminata 22: GSMUA_Achr9P28590_001

Musa balbisiana: ITC1587_Bchr5_P13689

Sorghum bicolor : jgi|Sorbi1|5054440|Sb03g046910

Sorghum bicolor : jgi|Sorbi1|5040460|Sb05g019800

Sorghum bicolor : jgi|Sorbi1|5061266|Sb10g002940

Zea mays v181: GRMZM2G130379_T02|PACid:20843051

Zea mays v181: GRMZM2G047409_T01|PACid:20826100

Zea mays v181: GRMZM2G049370_T01|PACid:20871164

Zea mays v181: GRMZM2G123794_T01|PACid:20867857

Zea mays v181: GRMZM2G049432_T01|PACid:20863182

Zea mays v181: GRMZM2G123838_T01|PACid:20862972

Zea mays v181: GRMZM2G161306_T01|PACid:20866621

Zea mays v181: GRMZM2G338696_T02|PACid:20850475

Zea mays v181: GRMZM2G349274_T02|PACid:20862420

Zea mays v181: GRMZM2G338696_T05|PACid:20850471

Zea mays v181: GRMZM2G338696_T06|PACid:20850472

Zea mays subsp. mays : GRMZM2G130379_P01

Zea mays subsp. mays : GRMZM2G047409_P01

Zea mays subsp. mays : GRMZM2G049370_P01

Zea mays subsp. mays : GRMZM2G123794_P01

Zea mays subsp. mays : GRMZM2G049432_P01

Zea mays subsp. mays : GRMZM2G123838_P01

Zea mays subsp. mays : GRMZM2G161306_P01

Zea mays subsp. mays : GRMZM2G338696_P02

Zea mays subsp. mays : GRMZM2G349274_P01

Setaria italica v164: Si026962m|PACid:19706666

Setaria italica v164: Si015334m|PACid:19693295

Panicum virgatum v202: Pavirv00035066m|PACid:23755787

Panicum virgatum v202: Pavirv00058055m|PACid:23817856

Phyllostachys heterocyclavar. pubescens: PH01002609G0030

Oryza sativa v193: LOC_Os06g05080.1|PACid:21930016

Oryza sativa v193: LOC_Os08g23410.1|PACid:21886909

Oryza sativa v193: LOC_Os11g32500.1|PACid:21947619

Oryza sativa ssp. japonica 5.0: LOC_Os06g05080.1|13106.m00478|protein

Oryza sativa ssp. japonica 5.0: LOC_Os08g23410.1|13108.m02396|protein

Oryza sativa ssp. japonica 5.0: LOC_Os11g32500.1|13111.m03168|protein

Oryza brachyantha 22: OB08G19270.1

Oryza nivara 22: ONIVA06G03780.1

Oryza nivara 22: ONIVA08G11100.1

Oryza nivara 22: ONIVA11G14930.1

Oryza punctata 22: OPUNC06G02570.1

Oryza punctata 22: OPUNC08G09790.1

Oryza punctata 22: OPUNC11G12850.1

Oryza glaberrima: ORGLA08G0091800.1

Oryza glaberrima: ORGLA06G0027500.1

Oryza glumaepatula 22: OGLUM11G14970.1

Oryza glumaepatula 22: OGLUM06G02770.1

Oryza glumaepatula 22: OGLUM08G11330.1

Oryza meridionalis 22: OMERI06G02930.1

Oryza meridionalis 22: OMERI08G08710.1

Oryza barthii 22: OBART08G10480.1

Oryza barthii 22: OBART06G02800.1

Brachypodium distachyon : EG:BRADI1G51120.1

Brachypodium distachyon : EG:BRADI2G43320.1

Brachypodium distachyon : EG:BRADI3G20660.1

Brachypodium distachyon : EG:BRADI4G17260.1

Aegilops tauschii 22: EMT04672

Triticum aestivum 22: Traes_3B_B1F78C161.1

Triticum aestivum 22: Traes_4BS_8B93BC3E5.2

Triticum aestivum 22: Traes_4DS_191E32A5C.1

Triticum aestivum 22: Traes_5BS_D8647BAC7.1

Triticum aestivum 22: Traes_5DS_C12EE1942.1

Triticum urartu 22: TRIUR3_30178-P1

Triticum urartu 22: TRIUR3_33106-P1

Aquilegia coerulea v195: Aquca_003_00291.1|PACid:22050690

Aquilegia coerulea v195: Aquca_003_00291.2|PACid:22050691

Aquilegia coerulea v195: Aquca_025_00370.1|PACid:22063165

Actinidia chinensis Hongyang : Achn274541

Actinidia chinensis Hongyang : Achn213221

Solanum tuberosum : PGSC0003DMP400025072

Solanum tuberosum : PGSC0003DMP400039021

Solanum lycopersicum v.2.3: Solyc06g067940.2.1

Solanum lycopersicum v.2.3: Solyc03g118130.2.1

Solanum lycopersicum v.2.3: Solyc01g097910.2.1

Mimulus guttatus v140: mgv1a014573m|PACid:17677441

Mimulus guttatus v140: mgv1a015294m|PACid:17680509

Mimulus guttatus v140: mgv1a015084m|PACid:17697386

Populus trichocarpa v156: POPTR_0015s11940.1|PACid:18233663

Populus trichocarpa v156: POPTR_0005s05080.1|PACid:18206926

Manihot esculenta v147: cassava4.1_016687m|PACid:17965989

Manihot esculenta v147: cassava4.1_017711m|PACid:17965064

Manihot esculenta v147: cassava4.1_017764m|PACid:17962956

Manihot esculenta v147: cassava4.1_034450m|PACid:17989375

Linum usitatissimum v200: Lus10015945|PACid:23143761

Linum usitatissimum v200: Lus10016735|PACid:23149062

Linum usitatissimum v200: Lus10019005|PACid:23149958

Linum usitatissimum v200: Lus10022430|PACid:23171706

Prunus persica v139: ppa011413m|PACid:17653780

Prunus persica v139: ppa019590m|PACid:17665732

Malus domestica v196: MDP0000171277|PACid:22677070

Malus domestica v196: MDP0000174827|PACid:22651041

Malus domestica v196: MDP0000174368|PACid:22650303

Malus domestica v196: MDP0000523602|PACid:22682285

Malus domestica v196: MDP0000290148|PACid:22662863

Malus domestica v196: MDP0000135570|PACid:22631998

Fragaria vesca : gene16485

Fragaria vesca : gene33412

Cucumis sativus v122: Cucsa.133480.1|PACid:16962729

Glycine max v109: Glyma08g00990.1|PACid:16269514

Glycine max v109: Glyma03g40510.1|PACid:16254026

Glycine max v109: Glyma04g37940.1|PACid:16257106

Glycine max v109: Glyma05g33390.1|PACid:16260531

Phaseolus vulgaris v186: Phvulv091020684m|PACid:23530709

Phaseolus vulgaris v186: Phvulv091002483m|PACid:23531971

Phaseolus vulgaris v186: Phvulv091013738m|PACid:23553517

Medicago truncatula : Medtr3g098520.1

Medicago truncatula : Medtr7g114590.1

Carica papaya : evm.TU.supercontig_2215.2

Arabidopsis thaliana 10: AT3G15640.2

Arabidopsis thaliana 10: AT5G51010.1

Arabidopsis thaliana 10: AT3G15640.1

Arabidopsis thaliana 10: AT1G54500.1

Arabidopsis lyrata : jgi|Araly1|474725|fgenesh2_kg.1__4679__AT1G54500.1

Arabidopsis lyrata : jgi|Araly1|479016|fgenesh2_kg.3__1717__AT3G15640.1

Arabidopsis lyrata : jgi|Araly1|331490|fgenesh1_pm.C_scaffold_8000833

Capsella rubella v183: Carubv10014763m|PACid:20899254

Capsella rubella v183: Carubv10014765m|PACid:20899255

Capsella rubella v183: Carubv10022416m|PACid:20907009

Capsella rubella v183: Carubv10027289m|PACid:20912124

Brassica rapa Chiifu-401 1.2: Bra022748

Brassica rapa Chiifu-401 1.2: Bra027222

Brassica rapa Chiifu-401 1.2: Bra027225

Brassica rapa Chiifu-401 1.2: Bra033478

Thellungiella halophila v173: Thhalv10021634m|PACid:20181852

Thellungiella halophila v173: Thhalv10021638m|PACid:20181853

Thellungiella halophila v173: Thhalv10021630m|PACid:20183854

Thellungiella halophila v173: Thhalv10023702m|PACid:20200840

Thellungiella halophila v173: Thhalv10014834m|PACid:20204566

Citrus sinensis v154: orange1.1g040420m|PACid:18119134

Citrus clementina v165: clementine0.9_022246m|PACid:19254591

Citrus clementina v165: clementine0.9_023824m|PACid:19280041

Gossypium raimondii v221: Gorai.007G285800.1|PACid:26784286

Gossypium raimondii v221: Gorai.008G211100.1|PACid:26818947

Theobroma cacao B97-61/B2 v1: Tc03_g015990

Theobroma cacao B97-61/B2 v1: Tc05_g028040

Eucalyptus grandis v201: Eucgr.F02551.1|PACid:23583386

Eucalyptus grandis v201: Eucgr.K02190.1|PACid:23603724

Picea abies: MA_158671g0010

Pinus taeda: PITA_000066650-RA

Selaginella moellendorffii : jgi|Selmo1|146861|estExt_Genewise1.C_130797

Spizellomyces punctatus DAOM BR117 : SPPG_07905T0

Schizosaccharomyces japonicus yFS275 : SJAG_00976T0

Penicillium marneffei ATCC 18224 : Pmar_ATCC_18224:PMAA_055640.t1

Aspergillus clavatus NRRL 1 : ACLA_091830

Aspergillus flavus NRRL3357 : AFL2T_06652

Aspergillus niger 22: CADANGAP00005891

Aspergillus oryzae RIB40 : AO090026000651

Aspergillus wentii v1.0: jgi|Aspwe1|127915|estExt_Genewise1.C_2_t40239

Aspergillus tubingensis v1.0: jgi|Asptu1|192456|gm1.6647_g

Aspergillus terreus NIH2624 : ATET_09593

Neosartorya fischeri NRRL 181 : NFIA_035360||cytochrome

Aspergillus carbonarius ITEM 5010 : jgi|Aspca1|10135|e_gw1.00009.451.1

Aspergillus glaucus: jgi|Aspgl1|165135|estExt_Genewise1Plus.C_4_t10049

Aspergillus versicolor v1.0: jgi|Aspve1|134428|e_gw1.6.409.1

Aspergillus sydowii v1.0: jgi|Aspsy1|133791|estExt_Genemark1.C_80003

Aspergillus nidulans FGSC A4 : ANID_04525T0

Aspergillus brasiliensis v1.0: jgi|Aspbr1|123195|e_gw1.5.555.1

Aspergillus fumigatus Af293: Afu2g03010

Penicillium chrysogenum v1.0: jgi|Pench1|6594|gm1.6582_g

Penicillium chrysogenum Wisconsin 54-1255 : Pchr_Wisconsin_54-1255:Pc18g04080.t1

Aspergillus zonatus v1.0: jgi|Aspzo1|127371|fgenesh1_kg.1_#_1078_#_Locus344v1rpkm486.62

Uncinocarpus reesii 1704 : URET_01785

Trichophyton rubrum CBS 118892 : TERG_06224T0

Trichophyton tonsurans CBS 112818 : TESG_07514T0

Microsporum canis CBS 113480 : MCYG_05888T0

Histoplasma capsulatum class NAmI strain WU24 : HCAG_04564T0

Ajellomyces dermatitidis SLH14081 : BDBG_04645T0

Coccidioides immitis RS : CIMG_04576T0

Coccidioides posadasii RMSCC 3488 : CPAT_06423

Paracoccidioides brasiliensis Pb18 : PADG_04397T0

Aureobasidium pullulans var. subglaciale EXF-2481 v1.0: jgi|Aurpu_var_sub1|110589|estExt_Genewise1.C_190177

Mycosphaerella fijiensis CIRAD86 : jgi|Mycfi1|89362|estExt_fgenesh1_pg.C_490029

Septoria musiva v1.0: jgi|Sepmu1|148292|estExt_fgenesh1_kg.C_3_t10490

Dothistroma septosporum: jgi|Dotse1|70770|estExt_fgenesh1_kg.C_3_t20265

Zasmidium cellare ATCC 36951 v1.0: jgi|Zasce1|65539|fgenesh1_pm.12_#_160

Microsporum gypseum : MGYG_06083

Stagonospora nodorum : SNOT_09790

Pyrenophora tritici-repentis : PTRT_10686

Pyrenophora teres f. teres 22: EFQ89601

Cochliobolus lunatus m118 v2.0: jgi|Coclu2|28395|fgenesh1_kg.9_#_171_#_gnl|Clun|Contig_1847

Alternaria brassicicola : AB00156.1

Cochliobolus heterostrophus : jgi|CocheC5_1|59653|e_gw1.2.574.1

Cochliobolus carbonum 26-R-13 v1.0: jgi|Cocca1|94242|e_gw1.60.117.1

Cochliobolus victoriae FI3 v1.0: jgi|Cocvi1|83592|e_gw1.0.834.1

Cochliobolus miyabeanus ATCC 44560 v1.0: jgi|Cocmi1|81033|e_gw1.3.394.1

Setosphaeria turcica v1.0: jgi|Settu1|31049|fgenesh1_pg.2_#_229

Leptosphaeria maculans 22: CBX91382

Didymella exigua CBS 183.55 v1.0: jgi|Didex1|58197|e_gw1.8.217.1

Blumeria graminis 22: CCU75156

Sclerotinia sclerotiorum : SS1T_03202

Botrytis cinerea B05.10 : BC1T_06743

Amorphotheca resinae v1.0: jgi|Amore1|265741|CE116897_14148

Trichoderma harzianum CBS 226.95 v1.0: jgi|Triha1|514298|fgenesh1_kg.38_#_18_#_Locus411v1rpkm368.85

Trichoderma longibrachiatum ATCC 18648 v1.0: jgi|Trilo1|91507|CE22409_48427

Trichoderma virens Gv29-8 : jgi|Trive1|77631|estExt_Genewise1Plus.C_200364

Trichoderma reesei 1.2: jgi|Trire2|58493|e_gw1.5.888.1

Trichoderma citrinoviride v1.0: jgi|Trici1|5534|gm1.5534_g

Trichoderma atroviride : jgi|Triat1|141439|estExt_Genewise1.C_71007

Trichoderma asperellum CBS 433.97 v1.0: jgi|Trias1|71551|fgenesh1_pm.11_#_134

Fusarium verticillioides 7600 : FVEG_08989T0

Fusarium oxysporum f. sp. lycopersici 4286 : FOXG_10335T0

Nectria haematococca mpVI : jgi|Necha2|70219|estExt_Genewise1Plus.C_sca_20_chr6_4_00618

Fusarium graminearum : FGSG_12181T0

Glomerella graminicola 22: EFQ36110

Acremonium alcalophilumv 1.0: jgi|Acral1_c3a|1065514|fgenesh2_kg.8_#_41_#_Contig3736

Verticillium dahliae VdLs.17 : VDAG_09667T0

Verticillium albo-atrum VaMs.102 : VDBG_07802T0

Cryphonectria parasitica : jgi|Crypa1|80629|estExt_Genewise1.C_40016

Neurospora crassa OR74A : NCU05689T0

Neurospora discreta FGSC 8579 : jgi|Neudi1|169501|estExt_fgenesh3_kg.C_170017

Neurospora tetrasperma : jgi|Neute1|190946|estExt_fgenesh2_kg.C_320016

Chaetomium globosum CBS 148.51 : CHGT_05362

Thielavia terrestris NRRL 8126 : jgi|Thite1|127182|estExt_fgenesh2_kg.C_30343

Sporotrichum thermophile ATCC 42464 : jgi|Spoth1|111728|estExt_fgenesh1_kg.C_40414

Podospora anserina : Pa_7_570|chrm7_SC3|Putative

Magnaporthe grisea 70-15 : MGG_01135T0

Magnaporthe poae ATCC 64411 22: MAPG_09773T0

Apiospora montagnei NRRL 25634 v1.0: jgi|Apimo1|49904|fgenesh1_kg.21_#_103_#_Locus370v1rpkm395.71

Daldinia eschscholzii EC12 v1.0: jgi|DalEC12_1|321614|fgenesh1_kg.33_#_61_#_Locus426v1rpkm342.51

Fomitiporia mediterranea v1.0: jgi|Fomme1|76642|e_gw1.2.2475.1

Stereum hirsutum FP-91666 SS1 v1.0: jgi|Stehi1|127958|fgenesh1_pm.2_#_245

Schizophyllum commune : jgi|Schco1|68145|estExt_Genewise1Plus.C_50914

Melampsora laricis-populina : jgi|Mellp1|74577|estExt_fgenesh1_pm.C_120052

Puccinia graminis f. sp. tritici CRL 75-36-700-3 : PGTT_14276

Cronartium quercuum f. sp. fusiforme G11 v1.0: jgi|Croqu1|660734|fgenesh1_kg.102_#_30_#_Locus1075v1rpkm101.79

Conidiobolus coronatus NRRL28638 v1.0: jgi|Conco1|14267|gm1.12507_g

Sphaeroforma arctica JP610 : SARC_14879T0

Schistosoma mansoni : Smp_021730.3

Schistosoma mansoni : Smp_021730.1

Schistosoma mansoni : Smp_021730.2

Taenia solium : TsM_000219400;OldName=hunter_13967

Echinococcus granulosus : EgrG_000644600.1

Echinococcus multilocularis : EmuJ_000644600.1

Hymenolepis microstoma : HmN_000003200.1

Anopheles darlingi 22: ADAR000365-PA

Lottia gigantea : jgi|Lotgi1|227974|estExt_fgenesh2_pg.C_sca_10323

Crassostrea gigas 22: EKC24554

Crassostrea gigas 22: EKC27726

Oikopleura dioica: GSOIDT00000508001

Physcomitrella patens subsp. patens 22: PP1S9_355V6.1

Physcomitrella patens subsp. patens 22: PP1S30_125V6.1

Physcomitrella patens subsp. patens 22: PP1S59_328V6.1

Physcomitrella patens subsp. patens 22: PP1S59_328V6.2