SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,57997,57997,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

57997 - Tropomyosin
57997 - Tropomyosin

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

163 sequences contain the _gap_,57997,57997,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Burkholderia pseudomallei 1106a: gi|126456852|ref|YP_001074164.1|

Borrelia crocidurae str. Achema: gi|386859786|ref|YP_006272492.1|

Borrelia recurrentis A1: gi|203287993|ref|YP_002223008.1|

Arthrobacter phenanthrenivorans Sphe3: gi|325965071|ref|YP_004242977.1|

Trichomonas vaginalis : 97483.m00097

Trichomonas vaginalis : 80470.m00065

Symbiodinium minutum clade B1 v1.2: symbB.v1.2.007117.t1|scaffold430.1|size206084|12

Theileria parva : 525.m05816

Tetrahymena thermophila SB210 1 : 40.m00239

Paramecium tetraurelia : GSPATP00012538001

Paramecium tetraurelia : GSPATP00026739001

Leishmania infantum JPCM5 2.4: psu|LinJ27_V3.1720

Leishmania major strain Friedlin : psu|LmjF27.1820

Leishmania mexicana 2.4: psu|LmxM27.1820

Thecamonas trahens ATCC 50062 : AMSG_05892T1

Thecamonas trahens ATCC 50062 : AMSG_05892T0

Thecamonas trahens ATCC 50062 : AMSG_10495T0

Thecamonas trahens ATCC 50062 : AMSG_11668T0

Ostreococcus sp. RCC809 : jgi|OstRCC809_1|35473|fgenesh1_pg.C_scaffold_2000201

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|344092|estExt_fgenesh1_pg.C_chromosome_60078

Chlamydomonas reinhardtii 4.0: jgi|Chlre4|327366|pg.chromosome_6_#_746

Volvox carteri v199: Vocar20012914m|PACid:23129705

Volvox carteri f. nagariensis : jgi|Volca1|118298|fgenesh5_synt.34__21

Chlorella variabilis sp. NC64A : jgi|ChlNC64A_1|136937|IGS.gm_18_00043

Musa acuminata 22: GSMUA_Achr5P00320_001

Musa acuminata 22: GSMUA_Achr8P33460_001

Musa balbisiana: ITC1587_Bchr8_P24956

Zea mays v181: GRMZM2G114182_T01|PACid:20873924

Oryza punctata 22: OPUNC01G08400.1

Oryza punctata 22: OPUNC01G08400.2

Aegilops tauschii 22: EMT33826

Triticum aestivum 22: Traes_2BS_AA880E636.2

Aquilegia coerulea v195: Aquca_030_00359.1|PACid:22035699

Aquilegia coerulea v195: Aquca_030_00359.2|PACid:22035700

Aquilegia coerulea v195: Aquca_030_00359.3|PACid:22035701

Actinidia chinensis Hongyang : Achn132881

Solanum tuberosum : PGSC0003DMP400038984

Populus trichocarpa v156: POPTR_0002s05050.1|PACid:18245866

Manihot esculenta v147: cassava4.1_000279m|PACid:17974467

Manihot esculenta v147: cassava4.1_000217m|PACid:17971013

Manihot esculenta v147: cassava4.1_000104m|PACid:17981547

Prunus persica v139: ppa002236m|PACid:17654147

Prunus persica v139: ppa000287m|PACid:17662989

Malus domestica v196: MDP0000143020|PACid:22655471

Fragaria vesca : gene16417

Glycine max v109: Glyma12g02520.1|PACid:16286128

Glycine max v109: Glyma12g02520.2|PACid:16286129

Phaseolus vulgaris v186: Phvulv091012922m|PACid:23533246

Phaseolus vulgaris v186: Phvulv091012923m|PACid:23533247

Phaseolus vulgaris v186: Phvulv091029239m|PACid:23548397

Medicago truncatula : Medtr1g071540.1

Medicago truncatula : Medtr4g076030.1

Medicago truncatula : Medtr4g076030.2

Medicago truncatula : Medtr2g091015.1

Medicago truncatula : Medtr2g010420.2

Medicago truncatula : Medtr2g010420.3

Medicago truncatula : Medtr2g091280.1

Medicago truncatula : Medtr2g093010.1

Medicago truncatula : Medtr2g093010.2

Carica papaya : evm.TU.supercontig_1647.1

Arabidopsis thaliana 10: AT1G03080.1

Capsella rubella v183: Carubv10004182m|PACid:20894103

Capsella rubella v183: Carubv10022513m|PACid:20903620

Capsella rubella v183: Carubv10022514m|PACid:20903619

Capsella rubella v183: Carubv10000062m|PACid:20907681

Brassica rapa Chiifu-401 1.2: Bra005575

Brassica rapa Chiifu-401 1.2: Bra025461

Brassica rapa Chiifu-401 1.2: Bra032558

Thellungiella halophila v173: Thhalv10016148m|PACid:20179843

Thellungiella halophila v173: Thhalv10016149m|PACid:20179844

Thellungiella halophila v173: Thhalv10006534m|PACid:20186567

Thellungiella halophila v173: Thhalv10028372m|PACid:20197905

Citrus sinensis v154: orange1.1g000693m|PACid:18106935

Citrus sinensis v154: orange1.1g001522m|PACid:18117066

Citrus sinensis v154: orange1.1g001601m|PACid:18117067

Citrus clementina v165: clementine0.9_001088m|PACid:19253601

Citrus clementina v165: clementine0.9_000468m|PACid:19267148

Citrus clementina v165: clementine0.9_000470m|PACid:19267149

Gossypium raimondii v221: Gorai.007G139300.1|PACid:26783276

Gossypium raimondii v221: Gorai.007G139300.2|PACid:26783275

Gossypium raimondii v221: Gorai.007G139300.4|PACid:26783277

Gossypium raimondii v221: Gorai.007G139300.3|PACid:26783278

Gossypium raimondii v221: Gorai.007G139300.5|PACid:26783279

Gossypium raimondii v221: Gorai.007G174000.1|PACid:26783981

Gossypium raimondii v221: Gorai.001G093100.5|PACid:26823248

Theobroma cacao B97-61/B2 v1: Tc01_g028240

Eucalyptus grandis v201: Eucgr.A00904.1|PACid:23562616

Picea abies: MA_10429332g0010

Entamoeba invadens 1.2: jCVI|EIN_252620

Allomyces macrogynus ATCC 38327 : AMAG_03369T0

Catenaria anguillulae PL171 v1.0: jgi|Catan1|42092|fgenesh1_kg.107_#_10_#_Locus8666v1rpkm11.06

Schizosaccharomyces pombe: SPAC1F3.06c

Tuber melanosporum Vittad : GSTUMT00008567001

Tuber melanosporum Mel28 22: CAZ84369

Stagonospora nodorum : SNOT_14271

Leptosphaeria maculans 22: CBX97680

Nectria haematococca mpVI : jgi|Necha2|65315|estExt_Genewise1Plus.C_sca_8_chr1_1_00764

Fusarium graminearum : FGSG_05208T0

Fomitopsis pinicola FP-58527 SS1 v3.0: jgi|Fompi3|1053547|gm1.9227_g

Fomitopsis pinicolav1.0: jgi|Fompi1|101772|estExt_Genemark1.C_820014

Postia placenta : jgi|Pospl1|95047|fgenesh3_pg.126__28

Heterobasidion annosum : jgi|Hetan1|153628|estExt_fgenesh2_pm.C_10199

Schizophyllum commune : jgi|Schco1|85464|estExt_fgenesh1_kg.C_60197

Schizophyllum commune : jgi|Schco1|114118|augustus-scaffold_14.g52

Microbotryum violaceum 22: MVLG_04097T0

Sporobolomyces roseus IAM 13481 : jgi|Sporo1|33334|estExt_fgenesh1_pg.C_70163

Rhodotorula graminis WP1 v1.0: jgi|Rhoba1_1|51222|estExt_Genemark1.C_2_t10093

Rhizomucor miehei CAU432 : RhzM07550

Proterospongia sp. ATCC 50818 : PTSG_00099T0

Acropora digitifera v1.0: adi_v1.05536

Acropora digitifera v1.0: adi_v1.05537

Mnemiopsis leidyi: ML030916a-PA

Hymenolepis microstoma : HmN_000175600.1

Hymenolepis microstoma : HmN_000670200.1

Caenorhabditis briggsae 2: CBG24242

Strigamia maritima 22: SMAR006402-PA

Pediculus humanus corporis : vb|PHUM353010-PA|EEB15173.1|Centromeric

Anopheles gambiae 49_3j: AGAP010985-PA

Culex pipiens quinquefasciatus : CPIJ001714|rootletin|protein_coding|supercont3.19|1463366|1471246

Culex pipiens quinquefasciatus : CPIJ017714|bruchpilot|protein_coding|supercont3.990|7617|18012

Drosophila persimilis 1.3: FBpp0176650

Drosophila pseudoobscura 2.13: FBpp0284843

Drosophila grimshawi 1.3: FBpp0152763

Lucilia cuprina: KNC27670

Atta cephalotes v1.1: AC07551-PA

Acromyrmex echinatior v3.8: Aech_05029

Solenopsis invicta v.2.2.3: SI2.2.0_10610

Pogonomyrmex barbatus v1.2: PB18510-RA

Linepithema humile v1.1: LH10797-PA

Harpegnathos saltator v3.3: Hsal_12016--XP_624402.1_APIME

Lottia gigantea : jgi|Lotgi1|133011|e_gw1.82.17.1

Crassostrea gigas 22: EKC35947

Adineta vaga: GSADVT00000719001

Ciona savignyi 76_2.0: ENSCSAVP00000013838

Ciona savignyi 76_2.0: ENSCSAVP00000013839

Oikopleura dioica: GSOIDT00014980001

Astyanax mexicanus 76: ENSAMXP00000008859

Poecilia formosa 76: ENSPFOP00000018221

Takifugu rubripes 76_4: ENSTRUP00000026159

Takifugu rubripes 76_4: ENSTRUP00000026160

Lepisosteus oculatus 76: ENSLOCP00000001722

Lepisosteus oculatus 76: ENSLOCP00000006630

Lepisosteus oculatus 76: ENSLOCP00000020639

Lepisosteus oculatus 76: ENSLOCP00000020643

Latimeria chalumnae 76_1: ENSLACP00000012209

Latimeria chalumnae 76_1: ENSLACP00000017475

Latimeria chalumnae 76_1: ENSLACP00000017476

Xenopus tropicalis 76_4.2: ENSXETP00000029410

Saccoglossus kowalevskii v3.0: Sakowv30043455m

Saccoglossus kowalevskii v3.0: Sakowv30043456m

Saccoglossus kowalevskii v3.0: Sakowv30046110m

Ornithorhynchus anatinus 76_5: ENSOANP00000024590

Ornithorhynchus anatinus 76_5: ENSOANP00000005004

Dasypus novemcinctus 76_2: ENSDNOP00000007072

Myotis lucifugus 76_2.0: ENSMLUP00000013697

Myotis lucifugus 76_2.0: ENSMLUP00000001992

Equus caballus 76_2: ENSECAP00000012395

Felis catus 76_6.2: ENSFCAP00000013163

Oryctolagus cuniculus 76_2: ENSOCUP00000000165

Rattus norvegicus 76_5.0: ENSRNOP00000052694

Otolemur garnettii 76_3: ENSOGAP00000013126

Callithrix jacchus 76_3.2.1: ENSCJAP00000015030

Macaca mulatta 76_1: ENSMMUP00000012986