SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 54171,101936 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54171 - DNA-binding domain
101936 - DNA-binding pseudobarrel domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

62 sequences contain the 54171,101936 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Physcomitrella patens: jgi|Phypa1_1|127150|e_gw1.63.77.1

Physcomitrella patens: jgi|Phypa1_1|45121|gw1.135.126.1

Musa acuminata 22: GSMUA_Achr10P19690_001

Musa acuminata 22: GSMUA_Achr3P29380_001

Musa balbisiana: ITC1587_Bchr10_P30636

Musa balbisiana: ITC1587_Bchr1_P01871

Musa balbisiana: ITC1587_Bchr3_P08106

Musa balbisiana: ITC1587_Bchr4_P08973

Musa balbisiana: ITC1587_Bchr9_P27446

Sorghum bicolor : jgi|Sorbi1|5045910|Sb09g004140

Setaria italica v164: Si012228m|PACid:19693799

Panicum virgatum v202: Pavirv00002612m|PACid:23755865

Panicum virgatum v202: Pavirv00010215m|PACid:23773004

Panicum virgatum v202: Pavirv00038100m|PACid:23773156

Oryza brachyantha 22: OB01G12600.1

Oryza punctata 22: OPUNC01G02240.1

Triticum aestivum 22: Traes_3B_D9C941D4C.1

Triticum urartu 22: TRIUR3_27886-P1

Aquilegia coerulea v195: Aquca_142_00013.1|PACid:22063995

Actinidia chinensis Hongyang : Achn261561

Mimulus guttatus v140: mgv1a023706m|PACid:17683014

Vitis vinifera : GSVIVT01023582001

Populus trichocarpa v156: POPTR_0006s20040.1|PACid:18213787

Manihot esculenta v147: cassava4.1_030966m|PACid:17978826

Manihot esculenta v147: cassava4.1_024894m|PACid:17976320

Linum usitatissimum v200: Lus10036282|PACid:23169312

Prunus persica v139: ppa018223m|PACid:17647527

Prunus persica v139: ppa026651m|PACid:17653097

Prunus persica v139: ppa026046m|PACid:17668883

Malus domestica v196: MDP0000223137|PACid:22662915

Malus domestica v196: MDP0000153589|PACid:22644982

Malus domestica v196: MDP0000187657|PACid:22625109

Malus domestica v196: MDP0000152089|PACid:22663193

Malus domestica v196: MDP0000945267|PACid:22621253

Fragaria vesca : gene24427

Cucumis sativus v122: Cucsa.142990.1|PACid:16963717

Cucumis sativus v122: Cucsa.147340.1|PACid:16964025

Cucumis sativus v122: Cucsa.283870.1|PACid:16974619

Glycine max v109: Glyma20g39140.1|PACid:16318372

Phaseolus vulgaris v186: Phvulv091009020m|PACid:23541021

Medicago truncatula : Medtr1g116920.1

Carica papaya : evm.TU.supercontig_46.145

Capsella rubella v183: Carubv10011592m|PACid:20890196

Brassica rapa Chiifu-401 1.2: Bra018868

Brassica rapa Chiifu-401 1.2: Bra018869

Brassica rapa Chiifu-401 1.2: Bra030476

Thellungiella halophila v173: Thhalv10012152m|PACid:20184762

Thellungiella halophila v173: Thhalv10012161m|PACid:20185016

Thellungiella halophila v173: Thhalv10010019m|PACid:20188671

Citrus sinensis v154: orange1.1g021945m|PACid:18094186

Citrus sinensis v154: orange1.1g046898m|PACid:18100630

Citrus clementina v165: clementine0.9_033196m|PACid:19265703

Citrus clementina v165: clementine0.9_016767m|PACid:19268866

Gossypium raimondii v221: Gorai.008G232100.1|PACid:26817979

Gossypium raimondii v221: Gorai.008G232300.1|PACid:26818843

Theobroma cacao B97-61/B2 v1: Tc04_g015240

Eucalyptus grandis v201: Eucgr.C00358.1|PACid:23569863

Eucalyptus grandis v201: Eucgr.C00358.2|PACid:23569864

Selaginella moellendorffii : jgi|Selmo1|66538|gw1.8.1327.1

Selaginella moellendorffii : jgi|Selmo1|71153|gw1.0.2475.1

Selaginella moellendorffii : jgi|Selmo1|110104|e_gw1.39.430.1

Selaginella moellendorffii : jgi|Selmo1|133669|e_gw1.120.114.1