SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for 47836,_gap_,47943,_gap_,57756 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47836 - Retroviral matrix proteins
47943 - Retrovirus capsid protein, N-terminal core domain
57756 - Retrovirus zinc finger-like domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

42 sequences contain the 47836,_gap_,47943,_gap_,57756 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Trypanosoma congolense 2.4: psu|TcIL3000.0.60500

Anolis carolinensis 76_2.0: ENSACAP00000003821

Anolis carolinensis 76_2.0: ENSACAP00000013294

Anolis carolinensis 76_2.0: ENSACAP00000013855

Felis catus 76_6.2: ENSFCAP00000025281

Felis catus 76_6.2: ENSFCAP00000020161

Felis catus 76_6.2: ENSFCAP00000025368

Felis catus 76_6.2: ENSFCAP00000017867

Felis catus 76_6.2: ENSFCAP00000017311

Felis catus 76_6.2: ENSFCAP00000022287

Felis catus 76_6.2: ENSFCAP00000018391

Felis catus 76_6.2: ENSFCAP00000020535

Felis catus 76_6.2: ENSFCAP00000020595

Felis catus 76_6.2: ENSFCAP00000019817

Felis catus 76_6.2: ENSFCAP00000021500

Felis catus 76_6.2: ENSFCAP00000025519

Felis catus 76_6.2: ENSFCAP00000020720

Felis catus 76_6.2: ENSFCAP00000022355

Felis catus 76_6.2: ENSFCAP00000019472

Felis catus 76_6.2: ENSFCAP00000024944

Felis catus 76_6.2: ENSFCAP00000021690

Felis catus 76_6.2: ENSFCAP00000022745

Felis catus 76_6.2: ENSFCAP00000017184

Felis catus 76_6.2: ENSFCAP00000021118

Felis catus 76_6.2: ENSFCAP00000024419

Felis catus 76_6.2: ENSFCAP00000016450

Felis catus 76_6.2: ENSFCAP00000024028

Felis catus 76_6.2: ENSFCAP00000018189

Ovis aries 76_3.1: ENSOARP00000003371

Ovis aries 76_3.1: ENSOARP00000019458

Sus scrofa 76_10.2: ENSSSCP00000019160

Sus scrofa 76_10.2: ENSSSCP00000024113

Sus scrofa 76_10.2: ENSSSCP00000024778

Sus scrofa 76_10.2: ENSSSCP00000019422

Sus scrofa 76_10.2: ENSSSCP00000022871

Sus scrofa 76_10.2: ENSSSCP00000021008

Sus scrofa 76_10.2: ENSSSCP00000026419

Sus scrofa 76_10.2: ENSSSCP00000024629

Sus scrofa 76_10.2: ENSSSCP00000021237

Sus scrofa 76_10.2: ENSSSCP00000020797

Sus scrofa 76_10.2: ENSSSCP00000025458

Sus scrofa 76_10.2: ENSSSCP00000026948