SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47836,_gap_,47943,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47836 - Retroviral matrix proteins
47943 - Retrovirus capsid protein, N-terminal core domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

40 sequences contain the 47836,_gap_,47943,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Trypanosoma congolense 2.4: psu|TcIL3000.0.30370

Dasypus novemcinctus 76_2: ENSDNOP00000020900

Felis catus 76_6.2: ENSFCAP00000017305

Felis catus 76_6.2: ENSFCAP00000020491

Felis catus 76_6.2: ENSFCAP00000023742

Felis catus 76_6.2: ENSFCAP00000024150

Felis catus 76_6.2: ENSFCAP00000017338

Felis catus 76_6.2: ENSFCAP00000022191

Felis catus 76_6.2: ENSFCAP00000021153

Felis catus 76_6.2: ENSFCAP00000021585

Felis catus 76_6.2: ENSFCAP00000021842

Felis catus 76_6.2: ENSFCAP00000018437

Felis catus 76_6.2: ENSFCAP00000021393

Felis catus 76_6.2: ENSFCAP00000019839

Felis catus 76_6.2: ENSFCAP00000020632

Felis catus 76_6.2: ENSFCAP00000020388

Felis catus 76_6.2: ENSFCAP00000024311

Ovis aries 76_3.1: ENSOARP00000000028

Ovis aries 76_3.1: ENSOARP00000000029

Ovis aries 76_3.1: ENSOARP00000000030

Ovis aries 76_3.1: ENSOARP00000002820

Ovis aries 76_3.1: ENSOARP00000004493

Ovis aries 76_3.1: ENSOARP00000010173

Ovis aries 76_3.1: ENSOARP00000010347

Ovis aries 76_3.1: ENSOARP00000010349

Ovis aries 76_3.1: ENSOARP00000010350

Ovis aries 76_3.1: ENSOARP00000010527

Ovis aries 76_3.1: ENSOARP00000010528

Ovis aries 76_3.1: ENSOARP00000012501

Ovis aries 76_3.1: ENSOARP00000012943

Ovis aries 76_3.1: ENSOARP00000014237

Ovis aries 76_3.1: ENSOARP00000015587

Ovis aries 76_3.1: ENSOARP00000017751

Ovis aries 76_3.1: ENSOARP00000018238

Ovis aries 76_3.1: ENSOARP00000020378

Ovis aries 76_3.1: ENSOARP00000021373

Sus scrofa 76_10.2: ENSSSCP00000022829

Sus scrofa 76_10.2: ENSSSCP00000023630

Sus scrofa 76_10.2: ENSSSCP00000023285

Sus scrofa 76_10.2: ENSSSCP00000025775