SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47836,_gap_,47943 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47836 - Retroviral matrix proteins
47943 - Retrovirus capsid protein, N-terminal core domain

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

17 sequences contain the 47836,_gap_,47943 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Sarcophilus harrisii 76_7.0: ENSSHAP00000000284

Felis catus 76_6.2: ENSFCAP00000022054

Felis catus 76_6.2: ENSFCAP00000018510

Felis catus 76_6.2: ENSFCAP00000020074

Felis catus 76_6.2: ENSFCAP00000019163

Felis catus 76_6.2: ENSFCAP00000017948

Felis catus 76_6.2: ENSFCAP00000024474

Felis catus 76_6.2: ENSFCAP00000016779

Felis catus 76_6.2: ENSFCAP00000018300

Felis catus 76_6.2: ENSFCAP00000025213

Felis catus 76_6.2: ENSFCAP00000022679

Felis catus 76_6.2: ENSFCAP00000019892

Felis catus 76_6.2: ENSFCAP00000022995

Ovis aries 76_3.1: ENSOARP00000015654

Ovis aries 76_3.1: ENSOARP00000015737

Ovis aries 76_3.1: ENSOARP00000015913

Ovis aries 76_3.1: ENSOARP00000016103