SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47943,47353,50630 superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47943 - Retrovirus capsid protein, N-terminal core domain
47353 - Retrovirus capsid dimerization domain-like
50630 - Acid proteases

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

10 sequences contain the 47943,47353,50630 domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Sarcophilus harrisii 76_7.0: ENSSHAP00000000212

Sarcophilus harrisii 76_7.0: ENSSHAP00000000246

Sarcophilus harrisii 76_7.0: ENSSHAP00000000362

Sarcophilus harrisii 76_7.0: ENSSHAP00000000466

Sarcophilus harrisii 76_7.0: ENSSHAP00000000541

Sarcophilus harrisii 76_7.0: ENSSHAP00000001434

Sarcophilus harrisii 76_7.0: ENSSHAP00000006455

Sarcophilus harrisii 76_7.0: ENSSHAP00000007202

Sarcophilus harrisii 76_7.0: ENSSHAP00000008709

Sarcophilus harrisii 76_7.0: ENSSHAP00000019687