SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 56968,48431,56968,_gap_ superfamilies in all genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
48431 - Lipovitellin-phosvitin complex, superhelical domain
56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

259 sequences contain the 56968,48431,56968,_gap_ domain architecture in all genomes.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Trichoplax adhaerens : jgi|Triad1|57880|fgeneshTA2_pg.C_scaffold_7000098

Nematostella vectensis 1.0: jgi|Nemve1|205229|fgenesh1_pg.scaffold_57000081

Taenia solium : TsM_000130500;OldName=hunter_10599

Echinococcus granulosus : EgrG_000684200.1

Echinococcus multilocularis : EmuJ_000684200.1

Hymenolepis microstoma : HmN_000813900.1

Caenorhabditis briggsae 2: CBG01578

Caenorhabditis briggsae 2: CBG14203

Caenorhabditis briggsae 2: CBG14234

Caenorhabditis briggsae 2: CBG16767

Caenorhabditis briggsae 2: CBG14608

Caenorhabditis elegans 76_235: K09F5.2

Caenorhabditis elegans 76_235: C42D8.2a

Caenorhabditis elegans 76_235: F59D8.1

Caenorhabditis elegans 76_235: F59D8.2

Caenorhabditis elegans 76_235: C04F6.1

Caenorhabditis elegans 76_235: K07H8.6c

Caenorhabditis elegans 76_235: K07H8.6a

Caenorhabditis elegans 76_235: C42D8.2b

Caenorhabditis remanei : CRE00388

Caenorhabditis remanei : CRE00395

Caenorhabditis remanei : CRE00763

Caenorhabditis remanei : CRE00896

Caenorhabditis remanei : CRE10004

Caenorhabditis brenneri : CBN01558

Caenorhabditis brenneri : CBN04919

Caenorhabditis brenneri : CBN21878

Caenorhabditis brenneri : CBN25808

Caenorhabditis japonica : CJA04254

Caenorhabditis japonica : CJA07318

Caenorhabditis japonica : CJA07434

Caenorhabditis japonica : CJA12874

Caenorhabditis japonica : CJA14034

Caenorhabditis japonica : CJA18455

Onchocerca volvulus 22: OVOC9748

Meloidogyne incognita : gnl|MincDB|prot:Minc06216

Meloidogyne incognita : gnl|MincDB|prot:Minc13093

Pristionchus pacificus : PPA03812

Pristionchus pacificus : PPA03816

Pristionchus pacificus : PPA09198

Pristionchus pacificus : PPA09778

Pristionchus pacificus : PPA10502

Pristionchus pacificus : PPA15838

Pristionchus pacificus : PPA21884

Ixodes scapularis : ISCW021709-PA

Ixodes scapularis : ISCW021710-PA

Ixodes scapularis : ISCW012423-PA

Ixodes scapularis : ISCW014675-PA

Ixodes scapularis : ISCW013727-PA

Tetranychus urticae : tetur20g01230

Tetranychus urticae : tetur39g00720

Tetranychus urticae : tetur39g00810

Tetranychus urticae : tetur43g00010

Tetranychus urticae : tetur43g00020

Sarcoptes scabiei: SSCA006100-PA

Sarcoptes scabiei: SSCA008962-PA

Strigamia maritima 22: SMAR000208-PA

Strigamia maritima 22: SMAR010527-PA

Daphnia pulex : jgi|Dappu1|311786|NCBI_GNO_0400561

Daphnia pulex : jgi|Dappu1|323929|NCBI_GNO_5800018

Daphnia pulex : jgi|Dappu1|304661|PASA_GEN_0300127

Daphnia pulex : jgi|Dappu1|307854|PASA_GEN_0700153

Daphnia pulex : jgi|Dappu1|314523|NCBI_GNO_1100231

Daphnia pulex : jgi|Dappu1|226075|estExt_fgenesh1_pg.C_470029

Daphnia pulex : jgi|Dappu1|308675|PASA_GEN_8300048

Daphnia pulex : jgi|Dappu1|308693|PASA_GEN_8300068

Daphnia pulex : jgi|Dappu1|332233|NCBI_GNO_18300040

Daphnia pulex : jgi|Dappu1|332702|NCBI_GNO_20200013

Acyrthosiphon pisum : gi|193695300|ref|XP_001942615.1|

Pediculus humanus corporis : vb|PHUM524870-PA|EEB18660.1|predicted

Pediculus humanus corporis : vb|PHUM524850-PA|EEB18658.1|Vitellogenin-1

Pediculus humanus corporis : vb|PHUM009400-PA|EEB09990.1|conserved

Tribolium castaneum 3.0: TC030467

Tribolium castaneum 3.0: TC013602

Tribolium castaneum 3.0: TC004643

Tribolium castaneum 3.0: TC010839

Tribolium castaneum 3.0: TC030604-GA

Anopheles gambiae 49_3j: AGAP008807-PA

Anopheles gambiae 49_3j: AGAP001826-PA

Anopheles gambiae 49_3j: AGAP002032-PA

Anopheles gambiae 49_3j: AGAP008369-PA

Anopheles darlingi 22: ADAR004058-PA

Anopheles darlingi 22: ADAR007215-PA

Culex pipiens quinquefasciatus : CPIJ002028|conserved

Culex pipiens quinquefasciatus : CPIJ001746|conserved

Culex pipiens quinquefasciatus : CPIJ007204|apolipophorins|protein_coding|supercont3.163|778891|794986

Culex pipiens quinquefasciatus : CPIJ009271|conserved

Aedes aegypti 55: AAEL009955-PA

Aedes aegypti 55: AAEL008598-PA

Aedes aegypti 55: AAEL006028-PA

Aedes aegypti 55: AAEL004969-PA

Drosophila mojavensis 1.3: FBpp0173862

Drosophila mojavensis 1.3: FBpp0160323

Drosophila virilis 1.2: FBpp0237884

Drosophila virilis 1.2: FBpp0232734

Drosophila virilis 1.2: FBpp0234670

Drosophila ananassae 1.3: FBpp0119666

Drosophila ananassae 1.3: FBpp0125976

Drosophila ananassae 1.3: FBpp0126019

Drosophila erecta 1.3: FBpp0138868

Drosophila erecta 1.3: FBpp0134951

Drosophila melanogaster 76_5: FBpp0088252

Drosophila melanogaster 76_5: FBpp0082643

Drosophila melanogaster 76_5: FBpp0292877

Drosophila sechellia 1.3: FBpp0207226

Drosophila sechellia 1.3: FBpp0194501

Drosophila simulans 1.3: FBpp0218724

Drosophila yakuba 1.3: FBpp0271365

Drosophila yakuba 1.3: FBpp0259575

Drosophila suzukii: DS10_00001601

Drosophila suzukii: DS10_00007068

Drosophila persimilis 1.3: FBpp0185837

Drosophila persimilis 1.3: FBpp0182488

Drosophila pseudoobscura 2.13: FBpp0281620

Drosophila pseudoobscura 2.13: FBpp0285464

Drosophila willistoni 1.3: FBpp0243797

Drosophila willistoni 1.3: FBpp0241004

Drosophila grimshawi 1.3: FBpp0144584

Drosophila grimshawi 1.3: FBpp0148111

Drosophila grimshawi 1.3: FBpp0157876

Camponotus floridanus v3.3: Cflo_11156--XP_395423.3_APIME

Camponotus floridanus v3.3: Cflo_10669--NP_001011578.1_APIME

Camponotus floridanus v3.3: Cflo_12406--XP_394269.3_APIME

Atta cephalotes v1.1: AC02521-PA

Atta cephalotes v1.1: AC01387-PA

Atta cephalotes v1.1: AC02996-PA

Acromyrmex echinatior v3.8: Aech_00826

Acromyrmex echinatior v3.8: Aech_07847

Acromyrmex echinatior v3.8: Aech_10714

Acromyrmex echinatior v3.8: Aech_06937

Acromyrmex echinatior v3.8: Aech_06939

Solenopsis invicta v.2.2.3: SI2.2.0_12018

Solenopsis invicta v.2.2.3: SI2.2.0_14292

Solenopsis invicta v.2.2.3: SI2.2.0_16166

Solenopsis invicta v.2.2.3: SI2.2.0_02565

Solenopsis invicta v.2.2.3: SI2.2.0_02806

Pogonomyrmex barbatus v1.2: PB23013-RA

Pogonomyrmex barbatus v1.2: PB13179-RA

Linepithema humile v1.1: LH11956-PA

Linepithema humile v1.1: LH16561-PA

Linepithema humile v1.1: LH25675-PA

Harpegnathos saltator v3.3: Hsal_13133--XP_392490.3_APIME

Harpegnathos saltator v3.3: Hsal_05584--XP_394269.3_APIME

Harpegnathos saltator v3.3: Hsal_08225--XP_395423.3_APIME

Harpegnathos saltator v3.3: Hsal_06124--XP_001121939.1_APIME

Apis mellifera 38.2d: ENSAPMP00000029755

Apis mellifera 38.2d: ENSAPMP00000025079

Apis mellifera 38.2d: ENSAPMP00000028657

Apis mellifera 38.2d: ENSAPMP00000014368

Apis mellifera 38.2d: ENSAPMP00000024878

Nasonia vitripennis : gi|156550358|ref|XP_001607396.1|

Nasonia vitripennis : gi|156550697|ref|XP_001607388.1|

Nasonia vitripennis : gi|156548676|ref|XP_001602367.1|

Bombyx mori : Bmb010905

Heliconius melpomene : HMEL002964-PA

Heliconius melpomene : HMEL004592-PA

Danaus plexippus OGS1.0: DPGLEAN13949-PA

Capitella sp. I : jgi|Capca1|208459|fgenesh1_pg.C_scaffold_162000012

Capitella sp. I : jgi|Capca1|210315|fgenesh1_pg.C_scaffold_1000061

Capitella sp. I : jgi|Capca1|209306|fgenesh1_pg.C_scaffold_384000007

Capitella sp. I : jgi|Capca1|222921|estExt_fgenesh1_pg.C_30006

Capitella sp. I : jgi|Capca1|198189|fgenesh1_pg.C_scaffold_3000127

Capitella sp. I : jgi|Capca1|198200|fgenesh1_pg.C_scaffold_3000138

Lottia gigantea : jgi|Lotgi1|230838|estExt_fgenesh2_pg.C_sca_150334

Crassostrea gigas 22: EKC20363

Crassostrea gigas 22: EKC22191

Crassostrea gigas 22: EKC30345

Crassostrea gigas 22: EKC32051

Octopus bimaculoides 280: Ocbimv22019658m.p

Octopus bimaculoides 280: Ocbimv22023313m.p

Octopus bimaculoides 280: Ocbimv22024234m.p

Strongylocentrotus purpuratus v3.1: SPU_016052

Strongylocentrotus purpuratus v3.1: SPU_028684

Danio rerio 76_9: ENSDARP00000062792

Danio rerio 76_9: ENSDARP00000098989

Danio rerio 76_9: ENSDARP00000120745

Astyanax mexicanus 76: ENSAMXP00000012629

Astyanax mexicanus 76: ENSAMXP00000012634

Astyanax mexicanus 76: ENSAMXP00000013629

Oreochromis niloticus 76_1.0: ENSONIP00000007721

Oreochromis niloticus 76_1.0: ENSONIP00000014732

Poecilia formosa 76: ENSPFOP00000012074

Poecilia formosa 76: ENSPFOP00000019315

Poecilia formosa 76: ENSPFOP00000019396

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000008271

Xiphophorus maculatus 76_4.4.2: ENSXMAP00000017716

Oryzias latipes 76_1: ENSORLP00000015852

Gasterosteus aculeatus 76_1: ENSGACP00000012719

Takifugu rubripes 76_4: ENSTRUP00000001218

Takifugu rubripes 76_4: ENSTRUP00000046519

Takifugu rubripes 76_4: ENSTRUP00000046520

Takifugu rubripes 76_4: ENSTRUP00000046521

Takifugu rubripes 76_4: ENSTRUP00000046523

Takifugu rubripes 76_4: ENSTRUP00000046525

Tetraodon nigroviridis 76_8: ENSTNIP00000015280

Gadus morhua 76_1: ENSGMOP00000007276

Gadus morhua 76_1: ENSGMOP00000018768

Gadus morhua 76_1: ENSGMOP00000018738

Gadus morhua 76_1: ENSGMOP00000018793

Gadus morhua 76_1: ENSGMOP00000018816

Lepisosteus oculatus 76: ENSLOCP00000021270

Lepisosteus oculatus 76: ENSLOCP00000021271

Latimeria chalumnae 76_1: ENSLACP00000015607

Latimeria chalumnae 76_1: ENSLACP00000022987

Xenopus tropicalis 76_4.2: ENSXETP00000019543

Xenopus laevis : gi|189441688|gb|AAI67484|

Anolis carolinensis 76_2.0: ENSACAP00000010611

Anolis carolinensis 76_2.0: ENSACAP00000022426

Pelodiscus sinensis 76_1.0: ENSPSIP00000007565

Ficedula albicollis 76_1.0: ENSFALP00000001777

Taeniopygia guttata 76_3.2.4: ENSTGUP00000013563

Anas platyrhynchos 76_1.0: ENSAPLP00000011529

Gallus gallus 76_4: ENSGALP00000026550

Meleagris gallopavo 76_2: ENSMGAP00000017831

Saccoglossus kowalevskii v3.0: Sakowv30016627m

Saccoglossus kowalevskii v3.0: Sakowv30032689m

Saccoglossus kowalevskii v3.0: Sakowv30022915m

Saccoglossus kowalevskii v3.0: Sakowv30016629m

Saccoglossus kowalevskii v3.0: Sakowv30016630m

Saccoglossus kowalevskii v3.0: Sakowv30016628m

Saccoglossus kowalevskii v3.0: Sakowv30016632m

Saccoglossus kowalevskii v3.0: Sakowv30016631m

Saccoglossus kowalevskii v3.0: Sakowv30016633m

Saccoglossus kowalevskii v3.0: Sakowv30016634m

Saccoglossus kowalevskii v3.0: Sakowv30016635m

Saccoglossus kowalevskii v3.0: Sakowv30016636m

Ornithorhynchus anatinus 76_5: ENSOANP00000005367

Choloepus hoffmanni 76_1: ENSCHOP00000011457

Dasypus novemcinctus 76_2: ENSDNOP00000034729

Loxodonta africana 76_3: ENSLAFP00000007741

Loxodonta africana 76_3: ENSLAFP00000022023

Erinaceus europaeus 76: ENSEEUP00000005049

Sorex araneus 76_1: ENSSARP00000000027

Pteropus vampyrus 76_1: ENSPVAP00000014219

Myotis lucifugus 76_2.0: ENSMLUP00000007193

Equus caballus 76_2: ENSECAP00000007072

Equus caballus 76_2: ENSECAP00000007160

Equus caballus 76_2: ENSECAP00000007202

Felis catus 76_6.2: ENSFCAP00000023369

Mustela putorius furo 76_1.0: ENSMPUP00000013646

Vicugna pacos 76_1: ENSVPAP00000010562

Ovis aries 76_3.1: ENSOARP00000018682

Sus scrofa 76_10.2: ENSSSCP00000009166

Oryctolagus cuniculus 76_2: ENSOCUP00000004631

Cavia porcellus 76_3: ENSCPOP00000004440

Dipodomys ordii 76_1: ENSDORP00000000860

Mus musculus 76_38: ENSMUSP00000035761

Mus musculus 76_38: ENSMUSP00000036044

Rattus norvegicus 76_5.0: ENSRNOP00000007371

Microcebus murinus 76_1: ENSMICP00000010321

Otolemur garnettii 76_3: ENSOGAP00000013514

Callithrix jacchus 76_3.2.1: ENSCJAP00000014061

Callithrix jacchus 76_3.2.1: ENSCJAP00000014066

Macaca mulatta 76_1: ENSMMUP00000010112

Gorilla gorilla 76_3.1: ENSGGOP00000005084

Gorilla gorilla 76_3.1: ENSGGOP00000020316

Pan troglodytes 76_2.1.4: ENSPTRP00000052150

Homo sapiens 76_38: ENSP00000470478

Homo sapiens 76_38: ENSP00000477990