SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,54631,56176 superfamilies in all Archaeal genomes

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

54631 - CBS-domain pair
56176 - FAD-binding/transporter-associated domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

69 sequences contain the _gap_,54631,56176 domain architecture in Archaea.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


Thermoplasmatales archaeon BRNA1: gi|474934626|ref|YP_007688208.1|

Methanobrevibacter smithii ATCC 35061: gi|148643086|ref|YP_001273599.1|

Haloquadratum walsbyi DSM 16790: gi|110667911|ref|YP_657722.1|

Haloquadratum walsbyi DSM 16790: gi|110669554|ref|YP_659365.1|

Methanoculleus marisnigri JR1: gi|126179261|ref|YP_001047226.1|

Methanoculleus marisnigri JR1: gi|126179920|ref|YP_001047885.1|

Halorhabdus utahensis DSM 12940: gi|257052004|ref|YP_003129837.1|

Halorhabdus utahensis DSM 12940: gi|257052623|ref|YP_003130456.1|

Methanoregula boonei 6A8: gi|154151431|ref|YP_001405049.1|

Halorubrum lacusprofundi ATCC 49239: gi|222478843|ref|YP_002565080.1|

Halorubrum lacusprofundi ATCC 49239: gi|222480300|ref|YP_002566537.1|

Halorubrum lacusprofundi ATCC 49239: gi|222481127|ref|YP_002567364.1|

Halomicrobium mukohataei DSM 12286: gi|257386825|ref|YP_003176598.1|

Halomicrobium mukohataei DSM 12286: gi|257386949|ref|YP_003176722.1|

Methanocorpusculum labreanum Z: gi|124486098|ref|YP_001030714.1|

Methanocella paludicola SANAE: gi|282163990|ref|YP_003356375.1|

Nitrosopumilus maritimus SCM1: gi|161528340|ref|YP_001582166.1|

Nitrosopumilus maritimus SCM1: gi|161528515|ref|YP_001582341.1|

Halobacterium salinarum R1: gi|169236868|ref|YP_001690068.1|

Halobacterium salinarum R1: gi|169237474|ref|YP_001690678.1|

Haloterrigena turkmenica DSM 5511: gi|284163344|ref|YP_003401623.1|

Haloterrigena turkmenica DSM 5511: gi|284164692|ref|YP_003402971.1|

Haloterrigena turkmenica DSM 5511: gi|284164868|ref|YP_003403147.1|

Haloterrigena turkmenica DSM 5511: gi|284172843|ref|YP_003406225.1|

Methanobrevibacter ruminantium M1: gi|288561208|ref|YP_003424694.1|

Haloarcula hispanica ATCC 33960: gi|344213262|ref|YP_004797582.1|

Haloarcula hispanica ATCC 33960: gi|344212667|ref|YP_004796987.1|

Haloferax mediterranei ATCC 33500: gi|389845744|ref|YP_006347983.1|

Haloferax mediterranei ATCC 33500: gi|389847300|ref|YP_006349539.1|

halophilic archaeon DL31: gi|345004845|ref|YP_004807698.1|

halophilic archaeon DL31: gi|345006361|ref|YP_004809214.1|

Halopiger xanaduensis SH-6: gi|336254546|ref|YP_004597653.1|

Halopiger xanaduensis SH-6: gi|336252602|ref|YP_004595709.1|

Salinarchaeum sp. Harcht-Bsk1: gi|510881519|ref|YP_008054187.1|

Salinarchaeum sp. Harcht-Bsk1: gi|510883009|ref|YP_008055677.1|

Methanoculleus bourgensis MS2: gi|397779455|ref|YP_006543928.1|

Methanoculleus bourgensis MS2: gi|397781378|ref|YP_006545851.1|

Methanosaeta harundinacea 6Ac: gi|386000846|ref|YP_005919145.1|

Methanosaeta harundinacea 6Ac: gi|386002703|ref|YP_005921002.1|

Methanobrevibacter sp. AbM4: gi|509155611|ref|YP_008075851.1|

Haloferax volcanii DS2: gi|292654430|ref|YP_003534327.1|

Haloferax volcanii DS2: gi|292653614|ref|YP_003533510.1|

Natrialba magadii ATCC 43099: gi|289581385|ref|YP_003479851.1|

Halalkalicoccus jeotgali B3: gi|300709453|ref|YP_003735267.1|

Halalkalicoccus jeotgali B3: gi|300710373|ref|YP_003736187.1|

Natrinema sp. J7-2: gi|397772284|ref|YP_006539830.1|

Natrinema sp. J7-2: gi|397772589|ref|YP_006540135.1|

Natrinema sp. J7-2: gi|397774101|ref|YP_006541647.1|

Methanocella arvoryzae MRE50: gi|147920421|ref|YP_685804.1|

Methanosphaerula palustris E1-9c: gi|219850708|ref|YP_002465140.1|

Methanosphaerula palustris E1-9c: gi|219851195|ref|YP_002465627.1|

Methanosarcina barkeri str. Fusaro: gi|73669958|ref|YP_305973.1|

Methanosaeta concilii GP6: gi|330506761|ref|YP_004383189.1|

Methanosaeta concilii GP6: gi|330506818|ref|YP_004383246.1|

Halobacterium sp. NRC-1: gi|15791115|ref|NP_280939.1|

Halobacterium sp. NRC-1: gi|16120214|ref|NP_395802.1|

Haloarcula marismortui ATCC 43049: gi|55378630|ref|YP_136480.1|

Haloarcula marismortui ATCC 43049: gi|55379245|ref|YP_137095.1|

Methanoplanus petrolearius DSM 11571: gi|307353980|ref|YP_003895031.1|

Methanoplanus petrolearius DSM 11571: gi|307353058|ref|YP_003894109.1|

Cenarchaeum symbiosum A: gi|118576164|ref|YP_875907.1|

Halogeometricum borinquense DSM 11551: gi|313127654|ref|YP_004037924.1|

Methanospirillum hungatei JF-1: gi|88601654|ref|YP_501832.1|

Methanospirillum hungatei JF-1: gi|88604239|ref|YP_504417.1|

Methanosarcina mazei Go1: gi|21229377|ref|NP_635299.1|

Nanoarchaeum equitans Kin4-M: gi|41614985|ref|NP_963483.1|

Natronomonas pharaonis DSM 2160: gi|76801358|ref|YP_326366.1|

Candidatus Nitrosopumilus sp. AR2: gi|407464782|ref|YP_006775664.1|

Complete genome sequence of Methanobacterium sp. Mb1: gi|566003269|ref|YP_008916109.1|