SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47576,_gap_,46966,_gap_,46966,46966,46966,_gap_,46966,_gap_,75399,75399,_gap_,46966,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,_gap_,46966,46966,46966,46966,46966,_gap_,47473,143575,_gap_ superfamilies in Cavia porcellus 69_3

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
75399 - Plakin repeat
75399 - Plakin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
47473 - EF-hand
143575 - GAS2 domain-like

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

1 sequences contain the 47576,_gap_,46966,_gap_,46966,46966,46966,_gap_,46966,_gap_,75399,75399,_gap_,46966,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,_gap_,46966,_gap_,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,_gap_,46966,46966,46966,46966,46966,_gap_,47473,143575,_gap_ domain architecture in Cavia porcellus 69_3.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


ENSCPOP00000004580