SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for 47576,_gap_,46966,_gap_,46966,_gap_,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,_gap_,46966,_gap_,46966,46966,46966,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,46966,46966,_gap_,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,46966,_gap_ superfamilies in Lottia gigantea

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

47576 - Calponin-homology domain, CH-domain
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat
46966 - Spectrin repeat

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

1 sequences contain the 47576,_gap_,46966,_gap_,46966,_gap_,46966,46966,_gap_,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,_gap_,46966,_gap_,46966,46966,46966,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,46966,46966,_gap_,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,_gap_,46966,46966,46966,46966,46966,46966,46966,46966,_gap_ domain architecture in Lottia gigantea .

Remove higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


jgi|Lotgi1|167389|fgenesh2_pg.C_sca_66000033