SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for _gap_,101936,_gap_,54277 superfamilies

The selected domain combination is the occurrence of the following superfamily domains in N- to C-Terminal order:

101936 - DNA-binding pseudobarrel domain
54277 - CAD & PB1 domains

Phylogenetic distribution

Other domain architectures with a similar genomic distribution.
See the phylogenetic distribution for this domain architecture.


Domain combination graphics and links

60 sequences contain the _gap_,101936,_gap_,54277 domain architecture in STRING v9.0.5.

Add higher domain architectures which include the chosen architecture.

Click on a domain architecture to see the domain assignment details.
The key to the domain colours is at the bottom of the page.


STRING v9.0.5: 39947.LOC_Os01g13520.1

STRING v9.0.5: 39947.LOC_Os01g70270.1

STRING v9.0.5: 3702.AT1G19850.1-P

STRING v9.0.5: 3702.AT5G37020.1-P

STRING v9.0.5: 3702.AT4G23980.1-P

STRING v9.0.5: 3702.AT2G46530.3-P

STRING v9.0.5: 39947.LOC_Os04g56850.1

STRING v9.0.5: 3702.AT1G34310.1-P

STRING v9.0.5: 3702.AT1G35540.1-P

STRING v9.0.5: 39946.BGIOSIBCE020981

STRING v9.0.5: 39947.LOC_Os06g09660.1

STRING v9.0.5: 3702.AT3G61830.1-P

STRING v9.0.5: 3702.AT1G35240.1-P

STRING v9.0.5: 3702.AT1G34410.1-P

STRING v9.0.5: 39947.LOC_Os08g40900.1

STRING v9.0.5: 3702.AT1G34390.1-P

STRING v9.0.5: 39946.BGIOSIBCE016961

STRING v9.0.5: 3218.JGI50215

STRING v9.0.5: 3218.JGI127229

STRING v9.0.5: 39946.BGIOSIBCE001023

STRING v9.0.5: 3694.gw1.I.8521.1

STRING v9.0.5: 3694.gw1.III.1140.1

STRING v9.0.5: 3694.fgenesh4_pg.C_LG_IX001438

STRING v9.0.5: 3694.fgenesh4_pg.C_LG_XVIII000045

STRING v9.0.5: 3694.estExt_fgenesh4_pg.C_1640064

STRING v9.0.5: 4558.Sb06g031900.1

STRING v9.0.5: 4558.Sb06g032500.1

STRING v9.0.5: 4558.Sb07g027080.1

STRING v9.0.5: 4558.Sb10g006440.1

STRING v9.0.5: 59689.fgenesh2_kg.1__2164__AT1G19850.1

STRING v9.0.5: 59689.Al_scaffold_0001_3500

STRING v9.0.5: 59689.fgenesh1_pg.C_scaffold_1003068

STRING v9.0.5: 59689.fgenesh2_kg.1__3608__AT1G35540.1

STRING v9.0.5: 59689.Al_scaffold_0001_3749

STRING v9.0.5: 59689.fgenesh1_pm.C_scaffold_3002720

STRING v9.0.5: 59689.scaffold_403621.1

STRING v9.0.5: 59689.fgenesh1_pg.C_scaffold_5002633

STRING v9.0.5: 59689.Al_scaffold_0007_1752

STRING v9.0.5: 59689.fgenesh2_kg.7__3131__AT5G37020.1

STRING v9.0.5: 39946.BGIOSIBCE017026

STRING v9.0.5: 15368.BRADI2G08120.1

STRING v9.0.5: 15368.BRADI4G07470.2

STRING v9.0.5: 15368.BRADI5G10950.1

STRING v9.0.5: 39947.LOC_Os04g57610.1

STRING v9.0.5: 3702.AT1G35520.1-P

STRING v9.0.5: 3702.AT1G34170.3-P

STRING v9.0.5: 3694.gw1.44.432.1

STRING v9.0.5: 3694.gw1.II.1258.1

STRING v9.0.5: 3694.gw1.IV.3880.1

STRING v9.0.5: 3694.gw1.XIV.1750.1

STRING v9.0.5: 4558.Sb06g017490.1

STRING v9.0.5: 15368.BRADI3G40440.1

STRING v9.0.5: 15368.BRADI5G25160.1

STRING v9.0.5: 15368.BRADI5G25770.1

STRING v9.0.5: 29760.GSVIVG00006721001

STRING v9.0.5: 29760.GSVIVG00008630001

STRING v9.0.5: 29760.GSVIVG00014459001

STRING v9.0.5: 29760.GSVIVG00017021001

STRING v9.0.5: 29760.GSVIVG00018838001

STRING v9.0.5: 29760.GSVIVG00023601001