SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for Smp-1-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Smp-1-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Hymenolepis_microstoma_ 1 1
Leishmania_mexicana_2.4 29 23
Leishmania_major_strain_Friedlin_ 31 25
Leishmania_infantum_JPCM5_2.4 33 27
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 32 26
Trypanosoma_vivax_ 17 14
Trypanosoma_cruzi_strain_CL_Brener 25 22
Trypanosoma_congolense_2.4 21 18
Trypanosoma_brucei_gambiense_v4.1 18 14
Trypanosoma_brucei_TREU927_v4.1 20 17

Strains
Genome     Number   Proteins
Trypanosoma_brucei_Lister_427_v4.1 20 17

Others
Genome     Number   Proteins
Protein_Data_Bank_(all_PDB_sequenc) 2 2
Uniprot_2018_03_genome 637 520
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
TargetDB__(Targets) 51 33
STRING_v9.0.5_(STRING) 52 43
Protozoadb_2010_08_(Protozoadb) 172 139
PDB_chains_(SCOP_1.75)_(PDB) 2 2
NCBI_2017_08_genome 350 285

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