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Domain combinations for PAZ domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PAZ domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   33 33
Pan_troglodytes_76_2.1.4   (Chimpanzee)   9 9
Gorilla_gorilla_76_3.1   (Western gorilla)   12 12
Pongo_abelii_76_2   (Sumatran orangutan)   10 10
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   10 10
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   16 16
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   22 22
Otolemur_garnettii_76_3   (Small-eared galago)   10 10
Microcebus_murinus_76_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_76_5.0   (Norway rat)   10 10
Mus_musculus_76_38   (House mouse)   10 10
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   8 7
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   9 9
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   10 10
Cavia_porcellus_76_3   (Domestic guinea pig)   9 9
Oryctolagus_cuniculus_76_2   (Rabbit)   9 9
Ochotona_princeps_76   (American pika)   10 9
Tupaia_belangeri_76   (Northern tree shrew)   14 8
Sus_scrofa_76_10.2   (Pig)   11 11
Bos_taurus_76_3.1   (Cattle)   9 9
Ovis_aries_76_3.1   (Sheep)   12 12
Vicugna_pacos_76_1   (Alpaca)   5 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   8 8
Mustela_putorius_furo_76_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_76_1   (Giant panda)   10 10
Canis_familiaris_76_3.1   (Dog)   10 10
Felis_catus_76_6.2   (Domestic cat)   10 10
Equus_caballus_76_2   (Horse)   10 10
Myotis_lucifugus_76_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_76_1   (Large flying fox)   10 9
Sorex_araneus_76_1   (European shrew)   9 8
Erinaceus_europaeus_76   (Western European hedgehog)   8 7
Procavia_capensis_76_1   (Cape rock hyrax)   7 5
Loxodonta_africana_76_3   (African savanna elephant)   11 11
Echinops_telfairi_76   (Small Madagascar hedgehog)   10 8
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   8 8
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   9 8
Macropus_eugenii_76_1.0   (Tammar wallaby)   8 8
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   10 10
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_76_5   (Platypus)   12 11
Saccoglossus_kowalevskii_v3.0 12 12
Petromyzon_marinus_76_7.0   (Sea lamprey)   8 8
Meleagris_gallopavo_76_2   (Turkey)   8 8
Gallus_gallus_76_4   (Chicken)   6 6
Anas_platyrhynchos_76_1.0   (Mallard)   7 7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   5 5
Ficedula_albicollis_76_1.0   (Collared flycatcher)   6 6
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   11 11
Anolis_carolinensis_76_2.0   (Green anole)   10 10
Xenopus_laevis_   (African clawed frog)   9 9
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_76_1   (Coelacanth)   8 8
Lepisosteus_oculatus_76   (Spotted gar)   8 8
Gadus_morhua_76_1   (Atlantic cod)   10 9
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   13 13
Takifugu_rubripes_76_4   (Torafugu)   32 32
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   12 12
Oryzias_latipes_76_1   (Japanese medaka)   10 10
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   8 8
Poecilia_formosa_76   (Amazon molly)   9 9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   13 13
Astyanax_mexicanus_76   (Mexican tetra)   8 8
Danio_rerio_76_9   (Zebrafish)   15 15
Oikopleura_dioica 11 11
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   11 11
Ciona_intestinalis_76   (Vase tunicate)   5 5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   6 5
Adineta_vaga 38 38
Octopus_bimaculoides_280 6 6
Crassostrea_gigas_22   (Pacific oyster)   7 6
Lottia_gigantea_   (Owl limpet)   4 4
Helobdella_robusta_ 5 5
Capitella_sp._I_ 6 6
Danaus_plexippus_OGS1.0   (Monarch butterfly)   8 8
Heliconius_melpomene_   (Postman butterfly)   5 5
Bombyx_mori_   (Domestic silkworm)   5 5
Nasonia_vitripennis_   (Jewel wasp)   11 9
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   16 16
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   9 9
Linepithema_humile_v1.1   (Argentine ant)   7 7
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6 6
Solenopsis_invicta_v.2.2.3   (Red fire ant)   8 8
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   6 6
Atta_cephalotes_v1.1 6 6
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8 8
Lucilia_cuprina   (Australian sheep blowfly)   7 7
Drosophila_grimshawi_1.3 6 6
Drosophila_willistoni_1.3 7 7
Drosophila_pseudoobscura_2.13 12 12
Drosophila_persimilis_1.3 14 14
Drosophila_suzukii 8 8
Drosophila_yakuba_1.3 6 6
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 6 6
Drosophila_melanogaster_76_5   (Fruit fly)   15 15
Drosophila_erecta_1.3 5 5
Drosophila_ananassae_1.3 6 6
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 6 5
Megaselia_scalaris_22 3 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   12 12
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   14 14
Anopheles_darlingi_22   (American malaria mosquito)   5 5
Anopheles_gambiae_49_3j   (African malaria mosquito)   6 6
Tribolium_castaneum_3.0   (Red flour beetle)   7 7
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6 6
Acyrthosiphon_pisum_   (Pea aphid)   16 16
Rhodnius_prolixus_22 8 8
Daphnia_pulex_   (Common water flea)   12 12
Strigamia_maritima_22 8 7
Sarcoptes_scabiei 4 4
Tetranychus_urticae_   (Two-spotted spider mite)   17 17
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   9 9
Pristionchus_pacificus_ 18 18
Meloidogyne_incognita_   (Southern root-knot nematode)   110 110
Meloidogyne_hapla_ 25 25
Onchocerca_volvulus_22 8 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   10 10
Caenorhabditis_japonica_ 18 16
Caenorhabditis_brenneri_ 58 58
Caenorhabditis_remanei_ 71 71
Caenorhabditis_elegans_76_235   (Roundworm)   39 39
Caenorhabditis_briggsae_2 27 27
Trichinella_spiralis_22 45 45
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 4 4
Echinococcus_granulosus_ 4 4
Taenia_solium_   (Pork tapeworm)   2 2
Schistosoma_mansoni_ 4 4
Mnemiopsis_leidyi   (Sea walnut)   6 6
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 8 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   7 7
Hydra_vulgaris 4 4
Amphimedon_queenslandica 6 5
Trichoplax_adhaerens_ 3 3
Sphaeroforma_arctica_JP610_ 3 3
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 7 7
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 3 3
Rhizomucor_miehei_CAU432_ 3 3
Sporisorium_reilianum_22 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 3 3
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 3
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 2 2
Microbotryum_violaceum_22 2 2
Sphaerobolus_stellatus_v1.0 10 7
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 7 7
Hydnomerulius_pinastri_v2.0 5 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 5 5
Pisolithus_microcarpus_441_v1.0 5 5
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 31 31
Coprinopsis_cinerea_okayama7_130_v3 8 8
Pleurotus_ostreatus_   (Oyster mushroom)   5 5
Amanita_thiersii_Skay4041_v1.0 5 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6 6
Galerina_marginata_v1.0 11 10
Hebeloma_cylindrosporum_h7_v2.0 7 7
Laccaria_bicolor_S238N-H82_ 6 6
Agaricus_bisporus_var._bisporus_ 6 6
Schizophyllum_commune_ 11 10
Stereum_hirsutum_FP-91666_SS1__v1.0 8 8
Heterobasidion_annosum_ 8 7
Gloeophyllum_trabeumv1.0 4 4
Punctularia_strigosozonata_v1.0 5 5
Sebacina_vermifera_MAFF_305830_v1.0 3 3
Fomitiporia_mediterranea_v1.0 7 7
Tulasnella_calospora_AL13/4D_v1.0 11 11
Postia_placenta_ 9 9
Wolfiporia_cocos_MD-104_SS10__v1.0 8 8
Fomitopsis_pinicolav1.0 7 7
Fomitopsis_pinicola_FP-58527_SS1_v3.0 7 7
Phanerochaete_chrysosporium_RP-78_2.1 6 6
Dichomitus_squalens 9 9
Trametes_versicolor_v1.0 4 4
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 5 4
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 3 3
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 3 2
Chaetomium_globosum_CBS_148.51_ 3 3
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   4 4
Verticillium_albo-atrum_VaMs.102_ 3 2
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 6 5
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 4 3
Trichoderma_atroviride_ 3 3
Trichoderma_citrinoviride_v1.0 4 3
Trichoderma_reesei_1.2 4 3
Trichoderma_virens_Gv29-8_ 4 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 4 3
Trichoderma_harzianum_CBS_226.95_v1.0 4 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 2
Botrytis_cinerea_B05.10_ 3 3
Sclerotinia_sclerotiorum_ 3 2
Blumeria_graminis_22 3 3
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 4 4
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 4 4
Stagonospora_nodorum_ 8 8
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 3 3
Mycosphaerella_fijiensis_CIRAD86_ 4 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 4 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 3 3
Trichophyton_verrucosum_HKI_0517_ 3 3
Arthroderma_benhamiae_CBS_112371_ 4 3
Trichophyton_tonsurans_CBS_112818_ 3 3
Trichophyton_rubrum_CBS_118892_ 3 3
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 3 3
Penicillium_chrysogenum_v1.0 3 3
Aspergillus_acidus_v1.0 3 3
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 3 3
Aspergillus_versicolor_v1.0 4 4
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 3 3
Neosartorya_fischeri_NRRL_181_ 3 3
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 3 3
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 4 3
Aspergillus_niger_ATCC_1015_ 4 3
Aspergillus_flavus_NRRL3357_ 3 3
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 3 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Pichia_membranifaciensv1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Debaromyces_hansenii 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 6 5
Allomyces_macrogynus_ATCC_38327_ 8 8
Spizellomyces_punctatus_DAOM_BR117_ 7 7
Dictyostelium_discoideum 6 6
Dictyostelium_purpureum_ 2 2
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 3 3
Entamoeba_histolytica_1 3 3
Selaginella_moellendorffii_ 18 18
Pinus_taeda   (Loblolly pine)   19 18
Picea_abies   (Norway spruce)   12 10
Eucalyptus_grandis_v201   (Rose gum)   25 25
Theobroma_cacao_B97-61/B2_v1   (Cacao)   17 16
Gossypium_raimondii_v221 70 70
Citrus_clementina_v165 23 23
Citrus_sinensis_v154   (Sweet orange)   37 36
Thellungiella_halophila_v173 15 15
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   18 17
Capsella_rubella_v183 15 15
Arabidopsis_lyrata_   (Lyrate rockcress)   13 13
Arabidopsis_thaliana_10   (Thale cress)   22 22
Carica_papaya_   (Papaya)   11 11
Medicago_truncatula_   (Barrel medic)   30 30
Phaseolus_vulgaris_v186   (French bean)   30 30
Glycine_max_v109   (Soybean)   33 33
Cucumis_sativus_v122   (Cucumber)   25 25
Fragaria_vesca_   (Wild strawberry)   22 22
Malus_domestica_v196   (Apple)   35 33
Prunus_persica_v139   (Peach)   19 19
Linum_usitatissimum_v200   (Flax)   25 24
Manihot_esculenta_v147   (Cassava)   16 16
Populus_trichocarpa_v156   (Black cottonwood)   18 18
Vitis_vinifera_   (Wine grape)   18 18
Mimulus_guttatus_v140   (Spotted monkey flower)   17 17
Solanum_lycopersicum_v.2.3   (Tomato)   21 21
Solanum_tuberosum_   (Potato)   18 18
Actinidia_chinensis_Hongyang_ 24 22
Aquilegia_coerulea_v195 93 93
Triticum_urartu_22 23 23
Triticum_aestivum_22   (Bread wheat)   81 81
Aegilops_tauschii_22 26 26
Brachypodium_distachyon_   (Stiff brome)   28 28
Oryza_barthii_22   (African wild rice)   40 40
Oryza_meridionalis_22 66 63
Oryza_glumaepatula_22 57 54
Oryza_glaberrima   (African rice)   19 19
Oryza_punctata_22 52 48
Oryza_nivara_22 57 54
Oryza_brachyantha_22   (Malo sina)   21 21
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   38 37
Oryza_sativa_v193   (Rice)   36 35
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   20 20
Panicum_virgatum_v202   (Switchgrass)   40 40
Setaria_italica_v164   (Foxtail millet)   23 23
Zea_mays_subsp._mays_   (Maize)   33 32
Zea_mays_v181   (Maize)   35 34
Sorghum_bicolor_   (Sorghum)   25 24
Musa_balbisiana   (Balbis banana)   19 18
Musa_acuminata_22   (Wild Malaysian banana)   17 17
Amborella_trichopoda_22 15 15
Physcomitrella_patens 11 11
Coccomyxa_subellipsoidea_sp._C-169_v2 2 2
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 1 1
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 2 2
Chlamydomonas_reinhardtii_4.0 2 2
Micromonas_sp._RCC299_ 1 1
Porphyridium_purpureum_02_2012 3 3
Bigelowiella_natans_CCMP2755_22 1 1
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 3 3
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 2 2
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 3 3
Trypanosoma_brucei_gambiense_v4.1 2 2
Trypanosoma_brucei_TREU927_v4.1 2 2
Ectocarpus_siliculosus 1 1
Aureococcus_anophagefferens_ 2 2
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 4 4
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 3 3
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   6 6
Phytophthora_sojae_1.1 8 7
Phytophthora_infestans_T30-4_ 5 5
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 1 1
Fragilariopsis_cylindrus 2 2
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 2 2
Paramecium_tetraurelia_ 15 15
Tetrahymena_thermophila_SB210_1_ 10 10
Ichthyophthirius_multifiliis_strain_G5_ 3 3
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Theileria_parva__ 1 1
Theileria_annulata 1 1
Symbiodinium_minutum_clade_B1_v1.2 3 3
Naegleria_gruberi_ 5 5
Trichomonas_vaginalis_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 2 2
Emiliania_huxleyi_CCMP1516_ 3 3
Aquifex_aeolicus_VF5 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1
Pyrococcus_furiosus_COM1 1 1
Methanocaldococcus_fervens_AG86 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   16 16
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   13 13
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   7 7
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   10 10
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   37 37
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 3 3
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 2 2
Batrachochytrium_dendrobatidis_JAM81_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   15 15
Hordeum_vulgare_22   (Domesticated barley)   69 69
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   23 23
Trypanosoma_brucei_Lister_427_v4.1 2 2
Neospora_caninum_Nc-Liverpool_6.2 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Pyrococcus_furiosus_DSM_3638 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   9 9
Pan_troglodytes_69_2.1.4   (Chimpanzee)   9 9
Gorilla_gorilla_69_3.1   (Western gorilla)   7 7
Pongo_abelii_69_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   8 8
Macaca_mulatta_69_1   (Rhesus monkey)   10 10
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   9 9
Otolemur_garnettii_69_3   (Small-eared galago)   10 10
Microcebus_murinus_69_1   (Gray mouse lemur)   8 8
Rattus_norvegicus_69_3.4   (Norway rat)   8 8
Mus_musculus_69_38   (House mouse)   8 8
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   8 7
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   9 9
Cavia_porcellus_69_3   (Domestic guinea pig)   9 9
Oryctolagus_cuniculus_69_2   (Rabbit)   9 9
Ochotona_princeps_69   (American pika)   10 9
Tupaia_belangeri_69   (Northern tree shrew)   14 8
Sus_scrofa_69_10.2   (Pig)   11 11
Bos_taurus_69_3.1   (Cattle)   9 9
Vicugna_pacos_69_1   (Alpaca)   5 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   8 8
Mustela_putorius_furo_69_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   9 9
Canis_familiaris_69_3.1   (Dog)   9 9
Felis_catus_69   (Domestic cat)   10 9
Equus_caballus_69_2   (Horse)   9 9
Myotis_lucifugus_69_2.0   (Little brown bat)   8 8
Pteropus_vampyrus_69_1   (Large flying fox)   10 9
Sorex_araneus_69_1   (European shrew)   9 8
Erinaceus_europaeus_69   (Western European hedgehog)   8 7
Procavia_capensis_69_1   (Cape rock hyrax)   7 5
Loxodonta_africana_69_3   (African savanna elephant)   9 9
Echinops_telfairi_69   (Small Madagascar hedgehog)   10 8
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   8 8
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   9 8
Macropus_eugenii_69_1.0   (Tammar wallaby)   8 8
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   9 9
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_69_5   (Platypus)   10 9
Petromyzon_marinus_69_7.0   (Sea lamprey)   6 6
Meleagris_gallopavo_69_2   (Turkey)   7 7
Gallus_gallus_69_2   (Chicken)   7 7
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   5 5
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   9 9
Anolis_carolinensis_69_2.0   (Green anole)   9 9
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_69_1   (Coelacanth)   7 7
Gadus_morhua_69_1   (Atlantic cod)   10 9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   11 11
Takifugu_rubripes_69_4   (Torafugu)   8 8
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   9 9
Oryzias_latipes_69_1   (Japanese medaka)   8 8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   8 8
Oreochromis_niloticus_69_1.0   (Nile tilapia)   9 9
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   5 5
Drosophila_melanogaster_69_5   (Fruit fly)   6 6
Caenorhabditis_elegans_69_215   (Roundworm)   29 29
Arabidopsis_thaliana_10   (Thale cress)   13 13

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   31 31
Homo_sapiens__(NCBI_version)   (Human)   15 15
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   8 8
Loa_loa_v3.3_(Request)   (Eye worm)   9 9
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   10 10
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   6 6
Moniliophthora_perniciosa_FA553__(Genome_survey) 6 6
Lotus_japonicus__(Early_assembly) 14 14
Malus_x_domestica_(Duplicate)   (Apple)   35 33
Ricinus_communis__(Early_assembly)   (Castor bean)   14 14
Nicotiana_benthamiana_0.4.4_(Early_draft) 26 25
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   20 20
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   21 21
Phoenix_dactylifera__(Early_draft)   (Date palm)   19 18
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 240 236
STRING_v9.0.5_(STRING) 879 864
NCBI_2017_08_genome 9107 9061
Uniprot_2018_03_genome 11741 11513
PDB_chains_(SCOP_1.75)_(PDB) 7 7
TargetDB__(Targets) 37 37
Protein_Data_Bank_(all_PDB_sequenc) 90 90
Protozoadb_2010_08_(Protozoadb) 29 29

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