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Domain combinations for DEK C-terminal domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a DEK C-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   13 13
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_76_3.1   (Western gorilla)   3 3
Pongo_abelii_76_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2 2
Papio_anubis_76   (Olive baboon)   5 5
Macaca_mulatta_76_1   (Rhesus monkey)   5 5
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   10 10
Otolemur_garnettii_76_3   (Small-eared galago)   3 3
Microcebus_murinus_76_1   (Gray mouse lemur)   3 3
Rattus_norvegicus_76_5.0   (Norway rat)   4 4
Mus_musculus_76_38   (House mouse)   6 6
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   2 2
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   4 4
Cavia_porcellus_76_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_76_2   (Rabbit)   3 3
Ochotona_princeps_76   (American pika)   3 3
Tupaia_belangeri_76   (Northern tree shrew)   2 2
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   3 3
Ovis_aries_76_3.1   (Sheep)   4 4
Vicugna_pacos_76_1   (Alpaca)   3 3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_76_1   (Giant panda)   3 3
Canis_familiaris_76_3.1   (Dog)   3 3
Felis_catus_76_6.2   (Domestic cat)   4 4
Equus_caballus_76_2   (Horse)   3 3
Myotis_lucifugus_76_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_76_1   (Large flying fox)   3 3
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   2 2
Procavia_capensis_76_1   (Cape rock hyrax)   3 3
Loxodonta_africana_76_3   (African savanna elephant)   5 5
Echinops_telfairi_76   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   5 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   4 4
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   4 4
Ornithorhynchus_anatinus_76_5   (Platypus)   4 4
Saccoglossus_kowalevskii_v3.0 6 6
Petromyzon_marinus_76_7.0   (Sea lamprey)   3 3
Meleagris_gallopavo_76_2   (Turkey)   4 4
Gallus_gallus_76_4   (Chicken)   2 2
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   2 2
Ficedula_albicollis_76_1.0   (Collared flycatcher)   4 4
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   3 3
Anolis_carolinensis_76_2.0   (Green anole)   3 3
Xenopus_laevis_   (African clawed frog)   8 8
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   4 4
Latimeria_chalumnae_76_1   (Coelacanth)   5 5
Lepisosteus_oculatus_76   (Spotted gar)   3 3
Gadus_morhua_76_1   (Atlantic cod)   1 1
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   4 4
Takifugu_rubripes_76_4   (Torafugu)   5 5
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   3 3
Poecilia_formosa_76   (Amazon molly)   5 5
Oreochromis_niloticus_76_1.0   (Nile tilapia)   5 5
Astyanax_mexicanus_76   (Mexican tetra)   3 3
Danio_rerio_76_9   (Zebrafish)   6 6
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1 1
Adineta_vaga 7 7
Octopus_bimaculoides_280 2 2
Crassostrea_gigas_22   (Pacific oyster)   3 3
Lottia_gigantea_   (Owl limpet)   2 2
Helobdella_robusta_ 1 1
Capitella_sp._I_ 2 2
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4 3
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   2 2
Nasonia_vitripennis_   (Jewel wasp)   2 2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3 3
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   2 2
Linepithema_humile_v1.1   (Argentine ant)   2 2
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   2 2
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2 2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   2 2
Atta_cephalotes_v1.1 2 2
Camponotus_floridanus_v3.3   (Florida carpenter ant)   2 2
Lucilia_cuprina   (Australian sheep blowfly)   3 3
Drosophila_grimshawi_1.3 3 3
Drosophila_willistoni_1.3 3 3
Drosophila_pseudoobscura_2.13 3 3
Drosophila_persimilis_1.3 3 3
Drosophila_suzukii 2 2
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 3 3
Drosophila_sechellia_1.3 3 3
Drosophila_melanogaster_76_5   (Fruit fly)   9 9
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 3 3
Drosophila_virilis_1.2 3 3
Drosophila_mojavensis_1.3 3 3
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   2 2
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4 4
Anopheles_darlingi_22   (American malaria mosquito)   3 3
Anopheles_gambiae_49_3j   (African malaria mosquito)   3 3
Tribolium_castaneum_3.0   (Red flour beetle)   3 3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   3 3
Strigamia_maritima_22 2 2
Sarcoptes_scabiei 1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   2 2
Pristionchus_pacificus_ 2 2
Meloidogyne_incognita_   (Southern root-knot nematode)   2 2
Onchocerca_volvulus_22 3 3
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3 3
Trichinella_spiralis_22 3 3
Hymenolepis_microstoma_ 2 2
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 2 2
Taenia_solium_   (Pork tapeworm)   2 2
Schistosoma_mansoni_ 3 3
Mnemiopsis_leidyi   (Sea walnut)   4 4
Nematostella_vectensis_1.0   (Starlet sea anemone)   3 3
Hydra_vulgaris 1 1
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 2 2
Monosiga_brevicollis_ 2 2
Sphaeroforma_arctica_JP610_ 1 1
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Conidiobolus_coronatus_NRRL28638_v1.0 9 9
Mortierella_verticillata_NRRL_6337_ 3 3
Phycomyces_blakesleeanus_ 5 5
Rhizopus_oryzae_RA_99-880_ 5 5
Mucor_circinelloides_ 4 4
Rhizomucor_miehei_CAU432_ 4 4
Malassezia_globosa_CBS_7966_ 6 6
Sporisorium_reilianum_22 4 4
Ustilago_maydis_ 2 2
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 3 3
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 4 4
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 3 3
Hydnomerulius_pinastri_v2.0 3 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 4 4
Pisolithus_tinctorius_Marx_270_v1.0 3 3
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 2
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 3 3
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 2 2
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 2 2
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 2 2
Postia_placenta_ 3 3
Wolfiporia_cocos_MD-104_SS10__v1.0 2 2
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 2 2
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 3 3
Podospora_anserina_ 3 3
Sporotrichum_thermophile_ATCC_42464_ 3 3
Thielavia_terrestris_NRRL_8126_ 3 3
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 3 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 3 3
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 3
Fusarium_verticillioides_7600_ 3 3
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 3 3
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 3 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 3
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 2 2
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 3 3
Trichophyton_equinum_CBS_127.97_ 3 3
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 3 3
Aspergillus_acidus_v1.0 3 3
Aspergillus_fumigatus_Af293 3 3
Aspergillus_brasiliensis_v1.0 3 3
Aspergillus_nidulans_FGSC_A4_ 3 3
Aspergillus_sydowii_v1.0 3 3
Aspergillus_versicolor_v1.0 3 3
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 3 3
Neosartorya_fischeri_NRRL_181_ 3 3
Aspergillus_terreus_NIH2624_ 3 3
Aspergillus_tubingensis_v1.0 3 3
Aspergillus_wentii_v1.0 3 3
Aspergillus_oryzae_RIB40_ 3 3
Aspergillus_niger_22 2 2
Aspergillus_flavus_NRRL3357_ 3 3
Aspergillus_clavatus_NRRL_1_ 3 3
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Yarrowia_lipolytica_CLIB122 1 1
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Candida_glabrata_CBS138 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 2 2
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 6 6
Allomyces_macrogynus_ATCC_38327_ 14 14
Spizellomyces_punctatus_DAOM_BR117_ 8 8
Selaginella_moellendorffii_ 5 5
Pinus_taeda   (Loblolly pine)   2 2
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   6 6
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6 6
Gossypium_raimondii_v221 26 26
Citrus_clementina_v165 10 10
Citrus_sinensis_v154   (Sweet orange)   14 14
Thellungiella_halophila_v173 7 7
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   13 13
Capsella_rubella_v183 9 9
Arabidopsis_lyrata_   (Lyrate rockcress)   8 8
Arabidopsis_thaliana_10   (Thale cress)   11 11
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   9 9
Phaseolus_vulgaris_v186   (French bean)   10 10
Glycine_max_v109   (Soybean)   18 18
Cucumis_sativus_v122   (Cucumber)   6 6
Fragaria_vesca_   (Wild strawberry)   5 5
Malus_domestica_v196   (Apple)   7 7
Prunus_persica_v139   (Peach)   4 4
Linum_usitatissimum_v200   (Flax)   7 7
Manihot_esculenta_v147   (Cassava)   11 11
Populus_trichocarpa_v156   (Black cottonwood)   12 12
Vitis_vinifera_   (Wine grape)   4 4
Mimulus_guttatus_v140   (Spotted monkey flower)   6 6
Solanum_lycopersicum_v.2.3   (Tomato)   7 7
Solanum_tuberosum_   (Potato)   13 13
Actinidia_chinensis_Hongyang_ 11 11
Aquilegia_coerulea_v195 11 11
Triticum_urartu_22 3 3
Triticum_aestivum_22   (Bread wheat)   8 8
Aegilops_tauschii_22 2 2
Brachypodium_distachyon_   (Stiff brome)   7 7
Oryza_barthii_22   (African wild rice)   4 4
Oryza_meridionalis_22 4 4
Oryza_glumaepatula_22 5 5
Oryza_glaberrima   (African rice)   4 4
Oryza_punctata_22 7 7
Oryza_nivara_22 5 5
Oryza_brachyantha_22   (Malo sina)   5 5
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5 5
Oryza_sativa_v193   (Rice)   5 5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   6 6
Panicum_virgatum_v202   (Switchgrass)   7 7
Setaria_italica_v164   (Foxtail millet)   6 6
Zea_mays_subsp._mays_   (Maize)   9 9
Zea_mays_v181   (Maize)   11 11
Sorghum_bicolor_   (Sorghum)   6 6
Musa_balbisiana   (Balbis banana)   8 8
Musa_acuminata_22   (Wild Malaysian banana)   7 7
Amborella_trichopoda_22 4 4
Physcomitrella_patens 3 3
Coccomyxa_subellipsoidea_sp._C-169_v2 3 3
Asterochloris_sp._Cgr/DA1pho_v1.0 2 2
Chlorella_variabilis_sp._NC64A_ 3 3
Chlorella_vulgaris_ 4 4
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 2 2
Chlamydomonas_reinhardtii_4.0 3 3
Ostreococcus_sp._RCC809_ 1 1
Ostreococcus_lucimarinus_CCE9901_ 1 1
Ostreococcus_tauri_ 1 1
Bathycoccus_prasinos_ 3 3
Micromonas_sp._RCC299_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 5 4
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Bigelowiella_natans_CCMP2755_22 4 4
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Ectocarpus_siliculosus 3 3
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 3 3
Pythium_arrhenomanes_ATCC_12531_22 2 2
Pythium_ultimum_v1.7-2 3 3
Pythium_aphanidermatum_DAOM_BR444_22 3 3
Pythium_irregulare_DAOM_BR486_22 3 3
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   4 4
Phytophthora_sojae_1.1 4 4
Phytophthora_infestans_T30-4_ 4 4
Phytophthora_capsici_ 3 3
Hyaloperonospora_arabidopsidis_22 3 3
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 2 2
Thalassiosira_pseudonana_CCMP1335 3 3
Perkinsus_marinus_ATCC_50983_ 2 2
Cryptosporidium_hominis 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Theileria_parva__ 1 1
Theileria_annulata 1 1
Symbiodinium_minutum_clade_B1_v1.2 5 5
Naegleria_gruberi_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   5 5
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   8 8
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3 3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 3 3
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 3 3
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5 5
Hordeum_vulgare_22   (Domesticated barley)   5 5
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5 5

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   3 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_69_3.1   (Western gorilla)   3 3
Pongo_abelii_69_2   (Sumatran orangutan)   2 2
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2 2
Macaca_mulatta_69_1   (Rhesus monkey)   4 4
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_69_3   (Small-eared galago)   3 3
Microcebus_murinus_69_1   (Gray mouse lemur)   3 3
Rattus_norvegicus_69_3.4   (Norway rat)   3 3
Mus_musculus_69_38   (House mouse)   3 3
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   2 2
Cavia_porcellus_69_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_69_2   (Rabbit)   3 3
Ochotona_princeps_69   (American pika)   3 3
Tupaia_belangeri_69   (Northern tree shrew)   2 2
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   3 3
Vicugna_pacos_69_1   (Alpaca)   3 3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   3 3
Ailuropoda_melanoleuca_69_1   (Giant panda)   3 3
Canis_familiaris_69_3.1   (Dog)   3 3
Felis_catus_69   (Domestic cat)   2 2
Equus_caballus_69_2   (Horse)   3 3
Myotis_lucifugus_69_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_69_1   (Large flying fox)   3 3
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   2 2
Procavia_capensis_69_1   (Cape rock hyrax)   3 3
Loxodonta_africana_69_3   (African savanna elephant)   3 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   3 3
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_69_5   (Platypus)   2 2
Petromyzon_marinus_69_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_69_2   (Turkey)   3 3
Gallus_gallus_69_2   (Chicken)   2 2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   2 2
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_69_1   (Coelacanth)   4 4
Gadus_morhua_69_1   (Atlantic cod)   1 1
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   4 4
Takifugu_rubripes_69_4   (Torafugu)   3 3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   3 3
Oryzias_latipes_69_1   (Japanese medaka)   1 1
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   3 3
Oreochromis_niloticus_69_1.0   (Nile tilapia)   4 4
Danio_rerio_69_9   (Zebrafish)   3 3
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Drosophila_melanogaster_69_5   (Fruit fly)   3 3
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   8 8

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   11 11
Homo_sapiens__(NCBI_version)   (Human)   6 6
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   3 3
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   3 3
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   3 3
Picea_sitchensis__(Incomplete)   (Sitka spruce)   2 2
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   7 7
Ricinus_communis__(Early_assembly)   (Castor bean)   6 6
Nicotiana_benthamiana_0.4.4_(Early_draft) 17 17
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   7 7
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7 7
Phoenix_dactylifera__(Early_draft)   (Date palm)   4 4
TargetDB__(Targets) 6 6
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Protozoadb_2010_08_(Protozoadb) 9 9
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 3 3
STRING_v9.0.5_(STRING) 266 266
NCBI_2017_08_genome 3458 3457
Protein_Data_Bank_(all_PDB_sequenc) 1 1
Uniprot_2018_03_genome 4395 4392

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