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Domain combinations for Nickel-containing superoxide dismutase, NiSOD superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Nickel-containing superoxide dismutase, NiSOD domain in that genome.

Complete genomes
Genome     Number   Proteins
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Bigelowiella_natans_CCMP2755_22 3 3
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Symbiodinium_minutum_clade_B1_v1.2 1 1
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 2 2
Leptolyngbya_sp._PCC_7376 1 1
Acaryochloris_marina_MBIC11017 1 1
Synechococcus_sp._CC9311 2 2
Prochlorococcus_marinus_str._MIT_9515 1 1
Trichodesmium_erythraeum_IMS101 1 1
cyanobacterium_UCYN-A 1 1
Halothece_sp._PCC_7418 1 1
Rivularia_sp._PCC_7116 1 1
Ilumatobacter_coccineus 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Thermobispora_bispora_DSM_43833 1 1
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 1 1
Modestobacter_marinus 1 1
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 1 1
Catenulispora_acidiphila_DSM_44928 1 1
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_sp._EAN1pec 1 1
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 1 1
Kitasatospora_setae_KM-6054 1 1
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_sp._PAMC26508 1 1
Streptomyces_flavogriseus_ATCC_33331 1 1
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_bingchenggensis_BCW-1 1 1
Streptomyces_violaceusniger_Tu_4113 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Actinosynnema_mirum_DSM_43827 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Nocardioides_sp._JS614 1 1
Salinispora_arenicola_CNS-205 1 1
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 1 1
Actinoplanes_sp._SE50/110 1 1
Actinoplanes_missouriensis_431 2 2
Mycobacterium_vanbaalenii_PYR-1 1 1
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_gilvum_PYR-GCK 1 1
Mycobacterium_chubuense_NBB4 1 1
Kytococcus_sedentarius_DSM_20547 1 1
Anaerolinea_thermophila_UNI-1 1 1
Coraliomargarita_akajimensis_DSM_45221 1 1
Ilyobacter_polytropus_DSM_2926 1 1
Desulfotalea_psychrophila_LSv54 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfovibrio_piezophilus 1 1
Hirschia_baltica_ATCC_49814 1 1
Shewanella_piezotolerans_WP3 1 1
Shewanella_woodyi_ATCC_51908 1 1
Shewanella_violacea_DSS12 1 1
Colwellia_psychrerythraea_34H 1 1
Marinomonas_posidonica_IVIA-Po-181 1 1
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 1 1

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Strains
Genome     Number   Proteins
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._CC9902 1 1
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._WH_8102 1 1
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._MIT_9301 1 1
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 1 1
Prochlorococcus_marinus_subsp._pastoris_str._CCMP1986 1 1
Prochlorococcus_marinus_str._MIT_9215 1 1
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 1 1
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._MIT_9303 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Cyanobacterium_aponinum_PCC_10605 1 1
Stanieria_cyanosphaera_PCC_7437 1 1
Frankia_sp._EuI1c 1 1
Streptomyces_albus_J1074 1 1
Streptomyces_rapamycinicus_NRRL_5491 1 1
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_fulvissimus_DSM_40593 1 1
Streptomyces_venezuelae_ATCC_10712 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Saccharothrix_espanaensis_DSM_44229 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Mycobacterium_gilvum_Spyr1 1 1
Psychroflexus_torquis_ATCC_700755 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Methylophaga_sp._JAM7 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
Uniprot_2018_03_genome 1762 1762
NCBI_2017_08_genome 1856 1856
PDB_chains_(SCOP_1.75)_(PDB) 3 3
STRING_v9.0.5_(STRING) 46 46
Protein_Data_Bank_(all_PDB_sequenc) 84 84
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 252 252

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