SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for RalF, C-terminal domain superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a RalF, C-terminal domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Ficedula_albicollis_76_1.0   (Collared flycatcher)   1 1
Rickettsia_bellii_OSU_85-389 1 1
Rickettsia_typhi_str._Wilmington 1 1
Rickettsia_prowazekii_str._BuV67-CWPP 1 1
Rickettsia_felis_URRWXCal2 1 1
Rickettsia_australis_str._Cutlack 1 1
Rickettsia_akari_str._Hartford 1 1
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 1 1

Strains
Genome     Number   Proteins
Rickettsia_bellii_RML369-C 1 1
Rickettsia_typhi_str._B9991CWPP 1 1
Rickettsia_typhi_str._TH1527 1 1
Rickettsia_prowazekii_str._Breinl 1 1
Rickettsia_prowazekii_str._NMRC_Madrid_E 1 1
Rickettsia_prowazekii_str._RpGvF24 1 1
Rickettsia_prowazekii_str._GvV257 1 1
Rickettsia_prowazekii_str._Dachau 1 1
Rickettsia_prowazekii_str._Katsinyian 1 1
Rickettsia_prowazekii_str._Chernikova 1 1
Rickettsia_prowazekii_Rp22 1 1
Rickettsia_prowazekii_str._Madrid_E 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1

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Others
Genome     Number   Proteins
Protein_Data_Bank_(all_PDB_sequenc) 5 5
STRING_v9.0.5_(STRING) 10 10
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 12 12
Uniprot_2018_03_genome 40 40
NCBI_2017_08_genome 550 550
PDB_chains_(SCOP_1.75)_(PDB) 1 1

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