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Domain combinations for Mediator hinge subcomplex-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Mediator hinge subcomplex-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   8 8
Pan_troglodytes_76_2.1.4   (Chimpanzee)   4 4
Gorilla_gorilla_76_3.1   (Western gorilla)   3 3
Pongo_abelii_76_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   3 3
Papio_anubis_76   (Olive baboon)   3 3
Macaca_mulatta_76_1   (Rhesus monkey)   3 3
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   4 4
Otolemur_garnettii_76_3   (Small-eared galago)   3 3
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   3 3
Mus_musculus_76_38   (House mouse)   9 9
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   3 3
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   5 5
Cavia_porcellus_76_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_76_2   (Rabbit)   2 2
Ochotona_princeps_76   (American pika)   1 1
Tupaia_belangeri_76   (Northern tree shrew)   3 3
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   4 4
Ovis_aries_76_3.1   (Sheep)   3 3
Vicugna_pacos_76_1   (Alpaca)   2 2
Tursiops_truncatus_76_1   (Bottlenose dolphin)   3 3
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_76_1   (Giant panda)   4 4
Canis_familiaris_76_3.1   (Dog)   4 4
Felis_catus_76_6.2   (Domestic cat)   3 3
Equus_caballus_76_2   (Horse)   3 3
Myotis_lucifugus_76_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_76_1   (Large flying fox)   3 3
Sorex_araneus_76_1   (European shrew)   2 2
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   4 4
Echinops_telfairi_76   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   4 4
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   4 4
Macropus_eugenii_76_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_76_5   (Platypus)   2 2
Saccoglossus_kowalevskii_v3.0 2 2
Petromyzon_marinus_76_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_76_2   (Turkey)   2 2
Gallus_gallus_76_4   (Chicken)   3 3
Anas_platyrhynchos_76_1.0   (Mallard)   3 3
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   3 3
Ficedula_albicollis_76_1.0   (Collared flycatcher)   3 3
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   4 4
Xenopus_laevis_   (African clawed frog)   10 10
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_76_1   (Coelacanth)   3 3
Lepisosteus_oculatus_76   (Spotted gar)   4 4
Gadus_morhua_76_1   (Atlantic cod)   3 3
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_76_4   (Torafugu)   3 3
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   3 3
Oryzias_latipes_76_1   (Japanese medaka)   3 3
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   3 3
Poecilia_formosa_76   (Amazon molly)   3 3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2 2
Astyanax_mexicanus_76   (Mexican tetra)   3 3
Danio_rerio_76_9   (Zebrafish)   4 4
Oikopleura_dioica 2 2
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_76   (Vase tunicate)   3 3
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   2 2
Adineta_vaga 3 3
Octopus_bimaculoides_280 5 5
Crassostrea_gigas_22   (Pacific oyster)   2 2
Lottia_gigantea_   (Owl limpet)   2 2
Helobdella_robusta_ 2 2
Capitella_sp._I_ 3 3
Danaus_plexippus_OGS1.0   (Monarch butterfly)   2 2
Heliconius_melpomene_   (Postman butterfly)   2 2
Bombyx_mori_   (Domestic silkworm)   1 1
Nasonia_vitripennis_   (Jewel wasp)   3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   5 5
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   3 3
Linepithema_humile_v1.1   (Argentine ant)   3 3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   3 3
Solenopsis_invicta_v.2.2.3   (Red fire ant)   2 2
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   3 3
Atta_cephalotes_v1.1 3 3
Camponotus_floridanus_v3.3   (Florida carpenter ant)   3 3
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 2 2
Drosophila_willistoni_1.3 2 2
Drosophila_pseudoobscura_2.13 3 3
Drosophila_persimilis_1.3 3 3
Drosophila_suzukii 5 5
Drosophila_yakuba_1.3 3 3
Drosophila_simulans_1.3 3 3
Drosophila_sechellia_1.3 3 3
Drosophila_melanogaster_76_5   (Fruit fly)   4 4
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 2 2
Drosophila_virilis_1.2 2 2
Drosophila_mojavensis_1.3 3 3
Megaselia_scalaris_22 1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   3 3
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   2 2
Anopheles_gambiae_49_3j   (African malaria mosquito)   3 3
Tribolium_castaneum_3.0   (Red flour beetle)   3 3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   1 1
Rhodnius_prolixus_22 3 3
Daphnia_pulex_   (Common water flea)   2 2
Strigamia_maritima_22 3 3
Sarcoptes_scabiei 3 2
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 3 3
Meloidogyne_incognita_   (Southern root-knot nematode)   4 4
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 2 2
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   2 2
Caenorhabditis_japonica_ 2 2
Caenorhabditis_brenneri_ 3 3
Caenorhabditis_remanei_ 2 2
Caenorhabditis_elegans_76_235   (Roundworm)   3 3
Caenorhabditis_briggsae_2 2 2
Trichinella_spiralis_22 2 2
Hymenolepis_microstoma_ 2 2
Echinococcus_multilocularis_ 2 2
Echinococcus_granulosus_ 2 2
Taenia_solium_   (Pork tapeworm)   2 2
Schistosoma_mansoni_ 2 2
Mnemiopsis_leidyi   (Sea walnut)   2 2
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 2 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   2 2
Hydra_vulgaris 2 2
Amphimedon_queenslandica 4 4
Trichoplax_adhaerens_ 2 2
Proterospongia_sp._ATCC_50818_ 2 2
Monosiga_brevicollis_ 2 2
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 2 2
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 2 2
Phycomyces_blakesleeanus_ 2 2
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 2 2
Rhizomucor_miehei_CAU432_ 2 2
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 2 2
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 4 4
Rhodotorula_graminis_WP1_v1.0 2 2
Microbotryum_violaceum_22 2 2
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 2 2
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 2 2
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 2
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 2 2
Laccaria_bicolor_S238N-H82_ 5 5
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 2 2
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 2 2
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 2 2
Fomitiporia_mediterranea_v1.0 2 2
Tulasnella_calospora_AL13/4D_v1.0 2 2
Postia_placenta_ 2 2
Wolfiporia_cocos_MD-104_SS10__v1.0 2 2
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 2 2
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 3 3
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 2 2
Neurospora_tetrasperma_ 2 2
Neurospora_discreta_FGSC_8579_ 2 2
Neurospora_crassa_OR74A_ 2 2
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 3 3
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 3 3
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 2 2
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 3 3
Trichoderma_reesei_1.2 3 3
Trichoderma_virens_Gv29-8_ 3 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 3
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 1 1
Blumeria_graminis_22 3 3
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 3 2
Coccidioides_immitis_RS_ 3 2
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 1 1
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 3 3
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 3 3
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 2 2
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 3 3
Tuber_melanosporum_Mel28_22 4 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 3 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2 2
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 2
Yarrowia_lipolytica_CLIB122 2 2
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 2 2
Candida_glabrata_CBS138 2 2
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 2 2
Ashbya_gossypii_ATCC_10895_ 2 2
Zygosaccharomyces_rouxii_ 2 2
Saccharomyces_mikatae_MIT 2 2
Saccharomyces_paradoxus_MIT 2 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   2 2
Saccharomyces_bayanus_MIT 2 2
Kluyveromyces_lactis 2 2
Schizosaccharomyces_cryophilus_OY26_22 2 2
Schizosaccharomyces_octosporus_yFS286_ 2 2
Schizosaccharomyces_japonicus_yFS275_ 2 2
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Catenaria_anguillulae_PL171_v1.0 2 2
Allomyces_macrogynus_ATCC_38327_ 4 4
Spizellomyces_punctatus_DAOM_BR117_ 2 2
Dictyostelium_discoideum 2 2
Dictyostelium_purpureum_ 2 2
Entamoeba_dispar_1.2 2 2
Entamoeba_invadens_1.2 2 2
Entamoeba_histolytica_1 2 2
Selaginella_moellendorffii_ 6 6
Pinus_taeda   (Loblolly pine)   2 2
Eucalyptus_grandis_v201   (Rose gum)   3 3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   5 5
Gossypium_raimondii_v221 7 7
Citrus_clementina_v165 3 3
Citrus_sinensis_v154   (Sweet orange)   5 5
Thellungiella_halophila_v173 3 3
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   6 6
Capsella_rubella_v183 4 4
Arabidopsis_lyrata_   (Lyrate rockcress)   4 4
Arabidopsis_thaliana_10   (Thale cress)   5 5
Carica_papaya_   (Papaya)   2 2
Medicago_truncatula_   (Barrel medic)   5 5
Phaseolus_vulgaris_v186   (French bean)   2 2
Glycine_max_v109   (Soybean)   5 5
Cucumis_sativus_v122   (Cucumber)   4 4
Fragaria_vesca_   (Wild strawberry)   3 3
Malus_domestica_v196   (Apple)   6 6
Prunus_persica_v139   (Peach)   13 13
Linum_usitatissimum_v200   (Flax)   4 4
Manihot_esculenta_v147   (Cassava)   7 7
Populus_trichocarpa_v156   (Black cottonwood)   3 3
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   3 3
Solanum_lycopersicum_v.2.3   (Tomato)   2 2
Solanum_tuberosum_   (Potato)   4 4
Actinidia_chinensis_Hongyang_ 3 3
Aquilegia_coerulea_v195 5 5
Triticum_urartu_22 2 2
Triticum_aestivum_22   (Bread wheat)   7 7
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   3 3
Oryza_barthii_22   (African wild rice)   3 3
Oryza_meridionalis_22 4 4
Oryza_glumaepatula_22 3 3
Oryza_glaberrima   (African rice)   2 2
Oryza_punctata_22 6 6
Oryza_nivara_22 3 3
Oryza_brachyantha_22   (Malo sina)   2 2
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   4 4
Oryza_sativa_v193   (Rice)   4 4
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1 1
Panicum_virgatum_v202   (Switchgrass)   6 6
Setaria_italica_v164   (Foxtail millet)   6 6
Zea_mays_subsp._mays_   (Maize)   7 7
Zea_mays_v181   (Maize)   7 7
Sorghum_bicolor_   (Sorghum)   2 2
Musa_balbisiana   (Balbis banana)   1 1
Musa_acuminata_22   (Wild Malaysian banana)   2 2
Amborella_trichopoda_22 3 3
Physcomitrella_patens 2 2
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 2 2
Chlorella_vulgaris_ 1 1
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 2 2
Chlamydomonas_reinhardtii_4.0 2 2
Ostreococcus_sp._RCC809_ 2 2
Ostreococcus_lucimarinus_CCE9901_ 2 2
Ostreococcus_tauri_ 2 2
Bathycoccus_prasinos_ 2 2
Micromonas_sp._RCC299_ 2 2
Micromonas_pusilla_CCMP1545_v3.0 2 2
Porphyridium_purpureum_02_2012 2 2
Thecamonas_trahens_ATCC_50062_ 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Cyanophora_paradoxa_ 3 3
Ectocarpus_siliculosus 2 2
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 2 2
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 2 2
Phytophthora_capsici_ 1 1
Hyaloperonospora_arabidopsidis_22 2 2
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 3 3
Thalassiosira_pseudonana_CCMP1335 1 1
Perkinsus_marinus_ATCC_50983_ 1 1
Paramecium_tetraurelia_ 1 1
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 2 2
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 2 2
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 2 2
Toxoplasma_gondii_GT1 1 1
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 2 2
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 1 1
Plasmodium_berghei_ANKA_ 1 1
Naegleria_gruberi_ 3 2
Trichomonas_vaginalis_ 1 1
Guillardia_theta_CCMP2712_v1.0_ 2 2
Emiliania_huxleyi_CCMP1516_ 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   8 8
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   4 4
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   3 3
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   2 2
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   3 3
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 3 2
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 3 3
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 2 2
Saccharomyces_cerevisiae_FL100 2 2
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 2 2
Saccharomyces_cerevisiae_T7 2 2
Saccharomyces_cerevisiae_FostersB 2 2
Saccharomyces_cerevisiae_FostersO 2 2
Saccharomyces_cerevisiae_VL3 2 2
Saccharomyces_cerevisiae_Vin13 2 2
Saccharomyces_cerevisiae_LalvinQA23 2 2
Saccharomyces_cerevisiae_AWRI796 2 2
Saccharomyces_cerevisiae_Sigma1278b 2 2
Saccharomyces_cerevisiae_W303 2 2
Saccharomyces_cerevisiae_JAY291 2 2
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 2 2
Saccharomyces_cerevisiae_CLIB215 2 2
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 2 2
Saccharomyces_cerevisiae_YJM789 2 2
Saccharomyces_cerevisiae_RM11-1a 2 2
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2 2
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JEL423_ 2 2
Batrachochytrium_dendrobatidis_JAM81_ 2 2
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3 3
Hordeum_vulgare_22   (Domesticated barley)   4 3
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 2
Neospora_caninum_Nc-Liverpool_6.2 2 2
Plasmodium_falciparum_HB3_ 2 2
Plasmodium_falciparum_Dd2_ 1 1
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   3 3
Pan_troglodytes_69_2.1.4   (Chimpanzee)   3 3
Gorilla_gorilla_69_3.1   (Western gorilla)   3 3
Pongo_abelii_69_2   (Sumatran orangutan)   3 3
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   3 3
Macaca_mulatta_69_1   (Rhesus monkey)   3 3
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2 2
Otolemur_garnettii_69_3   (Small-eared galago)   3 3
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   3 3
Mus_musculus_69_38   (House mouse)   3 3
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   3 3
Cavia_porcellus_69_3   (Domestic guinea pig)   3 3
Oryctolagus_cuniculus_69_2   (Rabbit)   3 3
Ochotona_princeps_69   (American pika)   1 1
Tupaia_belangeri_69   (Northern tree shrew)   3 3
Sus_scrofa_69_10.2   (Pig)   3 3
Bos_taurus_69_3.1   (Cattle)   3 3
Vicugna_pacos_69_1   (Alpaca)   2 2
Tursiops_truncatus_69_1   (Bottlenose dolphin)   3 3
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_69_1   (Giant panda)   4 4
Canis_familiaris_69_3.1   (Dog)   4 4
Felis_catus_69   (Domestic cat)   3 3
Equus_caballus_69_2   (Horse)   3 3
Myotis_lucifugus_69_2.0   (Little brown bat)   4 4
Pteropus_vampyrus_69_1   (Large flying fox)   3 3
Sorex_araneus_69_1   (European shrew)   2 2
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   3 3
Echinops_telfairi_69   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   2 2
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   4 4
Macropus_eugenii_69_1.0   (Tammar wallaby)   2 2
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_69_5   (Platypus)   2 2
Petromyzon_marinus_69_7.0   (Sea lamprey)   2 2
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   3 3
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   3 3
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   3 3
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   3 3
Latimeria_chalumnae_69_1   (Coelacanth)   3 3
Gadus_morhua_69_1   (Atlantic cod)   3 3
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   3 3
Takifugu_rubripes_69_4   (Torafugu)   3 3
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   3 3
Oryzias_latipes_69_1   (Japanese medaka)   3 3
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   3 3
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   2 2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   2 2
Ciona_intestinalis_69   (Vase tunicate)   3 3
Drosophila_melanogaster_69_5   (Fruit fly)   3 3
Caenorhabditis_elegans_69_215   (Roundworm)   2 2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2 2
Arabidopsis_thaliana_10   (Thale cress)   3 3

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   8 8
Homo_sapiens__(NCBI_version)   (Human)   4 4
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   3 3
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   2 2
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Lotus_japonicus__(Early_assembly) 5 5
Malus_x_domestica_(Duplicate)   (Apple)   6 6
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 6 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2 2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2 2
Phoenix_dactylifera__(Early_draft)   (Date palm)   3 3
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 19 19
Protozoadb_2010_08_(Protozoadb) 37 37
STRING_v9.0.5_(STRING) 264 262
PDB_chains_(SCOP_1.75)_(PDB) 3 3
NCBI_2017_08_genome 2478 2471
Uniprot_2018_03_genome 3340 3321
TargetDB__(Targets) 12 12
Protein_Data_Bank_(all_PDB_sequenc) 16 16

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