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Domain combinations for Acetamidase/Formamidase-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Acetamidase/Formamidase-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Adineta_vaga 2 2
Capitella_sp._I_ 1 1
Caenorhabditis_japonica_ 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 2 2
Hydnomerulius_pinastri_v2.0 2 2
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   3 3
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   1 1
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 1 1
Agaricus_bisporus_var._bisporus_ 2 2
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 2 2
Punctularia_strigosozonata_v1.0 2 2
Fomitiporia_mediterranea_v1.0 1 1
Postia_placenta_ 5 5
Wolfiporia_cocos_MD-104_SS10__v1.0 3 3
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 3 3
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 2 2
Trametes_versicolor_v1.0 2 2
Daldinia_eschscholzii_EC12_v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 3 2
Magnaporthe_grisea_70-15_ 1 1
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 2 2
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 3 3
Trichoderma_reesei_1.2 3 3
Trichoderma_virens_Gv29-8_ 3 3
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 1 1
Stagonospora_nodorum_ 1 1
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 1 1
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 2 2
Trichophyton_verrucosum_HKI_0517_ 2 2
Arthroderma_benhamiae_CBS_112371_ 2 2
Trichophyton_tonsurans_CBS_112818_ 2 2
Trichophyton_rubrum_CBS_118892_ 2 2
Uncinocarpus_reesii_1704_ 2 2
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 2 2
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_niger_ATCC_1015_ 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 1 1
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Selaginella_moellendorffii_ 3 3
Pinus_taeda   (Loblolly pine)   6 6
Picea_abies   (Norway spruce)   3 3
Eucalyptus_grandis_v201   (Rose gum)   3 3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 3 3
Citrus_clementina_v165 6 6
Citrus_sinensis_v154   (Sweet orange)   2 2
Thellungiella_halophila_v173 2 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2 2
Capsella_rubella_v183 2 2
Arabidopsis_lyrata_   (Lyrate rockcress)   1 1
Arabidopsis_thaliana_10   (Thale cress)   4 4
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   3 3
Glycine_max_v109   (Soybean)   2 2
Cucumis_sativus_v122   (Cucumber)   2 2
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   3 3
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   3 3
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   3 3
Vitis_vinifera_   (Wine grape)   3 3
Mimulus_guttatus_v140   (Spotted monkey flower)   2 2
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   2 2
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 4 4
Triticum_urartu_22 4 4
Triticum_aestivum_22   (Bread wheat)   9 9
Aegilops_tauschii_22 3 3
Brachypodium_distachyon_   (Stiff brome)   1 1
Oryza_barthii_22   (African wild rice)   2 2
Oryza_meridionalis_22 2 2
Oryza_glumaepatula_22 2 2
Oryza_glaberrima   (African rice)   1 1
Oryza_punctata_22 3 3
Oryza_nivara_22 2 2
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   1 1
Oryza_sativa_v193   (Rice)   1 1
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   1 1
Panicum_virgatum_v202   (Switchgrass)   6 6
Setaria_italica_v164   (Foxtail millet)   1 1
Zea_mays_subsp._mays_   (Maize)   4 4
Zea_mays_v181   (Maize)   4 4
Sorghum_bicolor_   (Sorghum)   2 2
Musa_balbisiana   (Balbis banana)   1 1
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Amborella_trichopoda_22 2 2
Physcomitrella_patens 1 1
Coccomyxa_subellipsoidea_sp._C-169_v2 2 2
Asterochloris_sp._Cgr/DA1pho_v1.0 3 3
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 1 1
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 1 1
Aureococcus_anophagefferens_ 1 1
Phaeodactylum_tricornutumCCAP_1055/1 3 3
Fragilariopsis_cylindrus 3 3
Guillardia_theta_CCMP2712_v1.0_ 2 2
Emiliania_huxleyi_CCMP1516_ 13 13
Acaryochloris_marina_MBIC11017 1 1
Synechococcus_elongatus_PCC_7942 2 1
Microcoleus_sp._PCC_7113 1 1
Gloeocapsa_sp._PCC_7428 3 3
Halothece_sp._PCC_7418 1 1
Rivularia_sp._PCC_7116 1 1
Anabaena_variabilis_ATCC_29413 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Conexibacter_woesei_DSM_14684 1 1
Eggerthella_lenta_DSM_2243 2 2
Slackia_heliotrinireducens_DSM_20476 1 1
Rubrobacter_xylanophilus_DSM_9941 2 2
Ilumatobacter_coccineus 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Nakamurella_multipartita_DSM_44233 1 1
Modestobacter_marinus 7 7
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 3 3
Kineococcus_radiotolerans_SRS30216 2 2
Catenulispora_acidiphila_DSM_44928 1 1
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_sp._EAN1pec 2 2
Frankia_alni_ACN14a 2 2
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 2 2
Kitasatospora_setae_KM-6054 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Saccharomonospora_viridis_DSM_43017 2 2
Pseudonocardia_dioxanivorans_CB1190 6 6
Saccharopolyspora_erythraea_NRRL_2338 1 1
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 1 1
Microlunatus_phosphovorus_NM-1 1 1
Salinispora_arenicola_CNS-205 1 1
Micromonospora_sp._L5 3 3
Micromonospora_aurantiaca_ATCC_27029 3 3
Actinoplanes_sp._N902-109 1 1
Actinoplanes_sp._SE50/110 1 1
Actinoplanes_missouriensis_431 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 2 2
Rhodococcus_jostii_RHA1 1 1
Rhodococcus_equi_103S 1 1
Rhodococcus_opacus_B4 1 1
Rhodococcus_erythropolis_PR4 2 2
Mycobacterium_massiliense_str._GO_06 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_sp._JLS 3 3
Mycobacterium_vanbaalenii_PYR-1 3 3
Mycobacterium_gilvum_PYR-GCK 2 2
Mycobacterium_chubuense_NBB4 2 2
Mycobacterium_smegmatis_str._MC2_155 5 5
Corynebacterium_efficiens_YS-314 2 2
Sanguibacter_keddieii_DSM_10542 2 2
Microbacterium_testaceum_StLB037 2 2
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 1 1
Cellulomonas_flavigena_DSM_20109 1 1
Kocuria_rhizophila_DC2201 1 1
Bifidobacterium_dentium_Bd1 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 2 2
Thermomicrobium_roseum_DSM_5159 2 2
Sphaerobacter_thermophilus_DSM_20745 4 4
Roseiflexus_sp._RS-1 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Chloroflexus_sp._MS-G 1 1
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_deserti_VCD115 2 2
Meiothermus_silvanus_DSM_9946 1 1
Meiothermus_ruber_DSM_1279 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Symbiobacterium_thermophilum_IAM_14863 1 1
Thermaerobacter_marianensis_DSM_12885 2 2
Sulfobacillus_acidophilus_DSM_10332 3 3
Thermincola_potens_JR 1 1
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Clostridium_saccharolyticum_WM1 1 1
Alkaliphilus_metalliredigens_QYMF 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Thermodesulfobium_narugense_DSM_14796 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Tepidanaerobacter_acetatoxydans_Re1 1 1
Thermoanaerobacter_tengcongensis_MB4 2 2
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Halanaerobium_hydrogeniformans 2 2
Halanaerobium_praevalens_DSM_2228 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Tetragenococcus_halophilus_NBRC_12172 2 2
Kyrpidia_tusciae_DSM_2912 2 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 2 2
Brevibacillus_brevis_NBRC_100599 2 2
Paenibacillus_sp._JDR-2 1 1
Bacillus_selenitireducens_MLS10 2 2
Listeria_welshimeri_serovar_6b_str._SLCC5334 1 1
Listeria_innocua_Clip11262 1 1
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 1 1
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Lysinibacillus_sphaericus_C3-41 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 2 2
Geobacillus_kaustophilus_HTA426 2 2
Geobacillus_sp._WCH70 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_anthracis_str._A0248 1 1
Bacillus_coagulans_2-6 1 1
Macrococcus_caseolyticus_JCSC5402 1 1
Staphylococcus_pseudintermedius_HKU10-03 1 1
Staphylococcus_carnosus_subsp._carnosus_TM300 1 1
Gemmatimonas_aurantiaca_T-27 1 1
Fibrella_aestuarina 1 1
Spirosoma_linguale_DSM_74 1 1
Phycisphaera_mikurensis_NBRC_102666 1 1
Pirellula_staleyi_DSM_6068 1 1
Anaerobaculum_mobile_DSM_13181 2 2
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Fervidobacterium_pennivorans_DSM_9078 2 2
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Candidatus_Solibacter_usitatus_Ellin6076 4 4
Granulicella_tundricola_MP5ACTX9 2 2
Granulicella_mallensis_MP5ACTX8 1 1
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 1 1
Acidithiobacillus_ferrivorans_SS3 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Desulfobacterium_autotrophicum_HRM2 1 1
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Corallococcus_coralloides_DSM_2259 1 1
Methylibium_petroleiphilum_PM1 3 3
Rubrivivax_gelatinosus_IL144 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 2 2
Burkholderia_xenovorans_LB400 3 3
Cupriavidus_taiwanensis_LMG_19424 2 2
Cupriavidus_necator_N-1 4 4
Ralstonia_eutropha_H16 3 3
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 2 1
Burkholderia_sp._RPE64 1 1
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 2 2
Delftia_sp._Cs1-4 4 4
Delftia_acidovorans_SPH-1 4 4
Polaromonas_sp._JS666 1 1
Variovorax_paradoxus_S110 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Herminiimonas_arsenicoxydans 3 3
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 4 4
Herbaspirillum_seropedicae_SmR1 1 1
Bordetella_avium_197N 1 1
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 1 1
Bordetella_bronchiseptica_RB50 1 1
Achromobacter_xylosoxidans_A8 1 1
Achromobacter_xylosoxidans 1 1
Methylotenera_versatilis_301 1 1
Methylovorus_sp._MP688 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Methylobacillus_flagellatus_KT 2 2
Asticcacaulis_excentricus_CB_48 2 2
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 2 2
Novosphingobium_sp._PP1Y 2 2
Sphingobium_sp._SYK-6 1 1
Sphingomonas_wittichii_RW1 2 2
Hirschia_baltica_ATCC_49814 2 2
Dinoroseobacter_shibae_DFL_12 1 1
Ruegeria_pomeroyi_DSS-3 1 1
Roseobacter_litoralis_Och_149 2 2
Roseobacter_denitrificans_OCh_114 2 2
Rhodobacter_sphaeroides_ATCC_17029 3 3
Paracoccus_denitrificans_PD1222 2 2
Tistrella_mobilis_KA081020-065 1 1
Granulibacter_bethesdensis_CGDNIH1 1 1
Acidiphilium_multivorum_AIU301 2 2
Acidiphilium_cryptum_JF-5 1 1
Polymorphum_gilvum_SL003B-26A1 2 2
Candidatus_Puniceispirillum_marinum_IMCC1322 2 2
Starkeya_novella_DSM_506 8 8
Azorhizobium_caulinodans_ORS_571 2 2
Methylobacterium_chloromethanicum_CM4 2 2
Methylobacterium_extorquens_AM1 2 2
Methylobacterium_sp._4-46 4 3
Methylobacterium_populi_BJ001 2 2
Methylobacterium_nodulans_ORS_2060 1 1
Methylobacterium_radiotolerans_JCM_2831 4 4
Parvibaculum_lavamentivorans_DS-1 2 2
Sinorhizobium_medicae_WSM419 1 1
Sinorhizobium_meliloti_AK83 1 1
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_radiobacter_K84 1 1
Agrobacterium_vitis_S4 1 1
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Hyphomicrobium_sp._MC1 2 2
Oligotropha_carboxidovorans_OM4 1 1
Rhodopseudomonas_palustris_BisA53 1 1
Bradyrhizobium_japonicum_USDA_110 5 5
Bradyrhizobium_sp._ORS_278 7 7
Saccharophagus_degradans_2-40 1 1
Teredinibacter_turnerae_T7901 1 1
Cellvibrio_japonicus_Ueda107 1 1
Shewanella_baltica_OS185 1 1
Marinobacter_adhaerens_HP15 1 1
Marinobacter_sp._BSs20148 2 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Marinobacter_aquaeolei_VT8 1 1
Alcanivorax_borkumensis_SK2 1 1
Marinomonas_posidonica_IVIA-Po-181 1 1
Chromohalobacter_salexigens_DSM_3043 1 1
Methylomicrobium_alcaliphilum 1 1
Halothiobacillus_neapolitanus_c2 2 2
Spiribacter_sp._UAH-SP71 1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 1 1
Serratia_sp._ATCC_39006 1 1
Dickeya_dadantii_Ech703 1 1
Klebsiella_oxytoca_E718 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Pseudomonas_sp._TKP 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 1 1
Pseudomonas_fluorescens_SBW25 1 1
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_calcoaceticus_PHEA-2 1 1
Candidatus_Korarchaeum_cryptofilum_OPF8 1 1
Aeropyrum_pernix_K1 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Metallosphaera_cuprina_Ar-4 1 1
Metallosphaera_sedula_DSM_5348 1 1
Sulfolobus_tokodaii_str._7 1 1
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1
Vulcanisaeta_moutnovskia_768-28 1 1
Vulcanisaeta_distributa_DSM_14429 1 1
Pyrobaculum_sp._1860 1 1
halophilic_archaeon_DL31 3 3
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 2 2
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Picrophilus_torridus_DSM_9790 1 1
Salinarchaeum_sp._Harcht-Bsk1 1 1
Halopiger_xanaduensis_SH-6 3 3
Haloterrigena_turkmenica_DSM_5511 2 2
Natrialba_magadii_ATCC_43099 2 2
Halorubrum_lacusprofundi_ATCC_49239 3 3
Haloquadratum_walsbyi_DSM_16790 2 2
Haloferax_mediterranei_ATCC_33500 1 1
Natronomonas_pharaonis_DSM_2160 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 4 4
Halalkalicoccus_jeotgali_B3 2 2

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Strains
Genome     Number   Proteins
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Hordeum_vulgare_22   (Domesticated barley)   2 2
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 2
Chroococcidiopsis_thermalis_PCC_7203 2 2
Chamaesiphon_minutus_PCC_6605 1 1
Cyanobium_gracile_PCC_6307 1 1
Dactylococcopsis_salina_PCC_8305 2 2
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._CC9605 1 1
Synechococcus_elongatus_PCC_6301 2 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Arthrospira_platensis_NIES-39 2 2
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 2 2
Frankia_sp._EuI1c 3 3
Frankia_sp._CcI3 1 1
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 1 1
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_sp._KMS 3 3
Mycobacterium_sp._MCS 3 3
Mycobacterium_gilvum_Spyr1 2 2
Mycobacterium_smegmatis_str._MC2_155 5 5
Mycobacterium_kansasii_ATCC_12478 1 1
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Deinococcus_peraridilitoris_DSM_19664 2 2
Sulfobacillus_acidophilus_TPY 6 6
Clostridium_acidurici_9a 2 2
Desulfitobacterium_hafniense_DCB-2 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermoanaerobacter_sp._X513 1 1
Carnobacterium_maltaromaticum_LMA28 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2 2
Paenibacillus_sp._Y412MC10 2 2
Listeria_monocytogenes_EGD_sequence 1 1
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 1 1
Listeria_monocytogenes_07PF0776 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_J1-220 1 1
Listeria_monocytogenes_J1816 1 1
Listeria_monocytogenes_SLCC2376 1 1
Listeria_monocytogenes_SLCC5850 1 1
Listeria_monocytogenes_ATCC_19117 1 1
Listeria_monocytogenes_L312 1 1
Listeria_monocytogenes_SLCC2479 1 1
Listeria_monocytogenes_SLCC7179 1 1
Listeria_monocytogenes_SLCC2540 1 1
Listeria_monocytogenes_SLCC2378 1 1
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 1 1
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 1 1
Listeria_monocytogenes_serotype_7_str._SLCC2482 1 1
Listeria_monocytogenes_08-5578 1 1
Listeria_monocytogenes_08-5923 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Listeria_monocytogenes_10403S 1 1
Listeria_monocytogenes_J0161 1 1
Listeria_monocytogenes_Finland_1998 1 1
Listeria_monocytogenes_FSL_R2-561 1 1
Listeria_monocytogenes_serotype_4b_str._F2365 1 1
Listeria_monocytogenes_EGD-e 1 1
Geobacillus_sp._C56-T3 2 2
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 2 2
Geobacillus_sp._Y412MC61 2 2
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_Q1 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Bacillus_coagulans_36D1 2 2
Staphylococcus_pseudintermedius_ED99 1 1
Staphylococcus_pasteuri_SP1 1 1
Staphylococcus_warneri_SG1 1 1
Singulisphaera_acidiphila_DSM_18658 2 2
Treponema_pedis_str._T_A4 1 1
Thermotoga_maritima_MSB8 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Anaeromyxobacter_sp._K 1 1
Anaeromyxobacter_dehalogenans_2CP-C 1 1
Myxococcus_stipitatus_DSM_14675 1 1
Pandoraea_pnomenusa_3kgm 2 2
Burkholderia_sp._YI23 3 3
Burkholderia_sp._CCGE1003 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 1 1
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 1 1
Bordetella_bronchiseptica_MO149 1 1
Bordetella_bronchiseptica_253 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Caulobacter_crescentus_CB15 1 1
Octadecabacter_antarcticus_307 1 1
Rhodobacter_sphaeroides_KD131 3 3
Rhodobacter_sphaeroides_ATCC_17025 2 2
Rhodobacter_sphaeroides_2.4.1 3 3
Paracoccus_aminophilus_JCM_7686 2 2
Methylobacterium_extorquens_DM4 2 2
Methylobacterium_extorquens_PA1 2 2
Sinorhizobium_fredii_USDA_257 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 3 3
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 3 3
Mesorhizobium_australicum_WSM2073 1 1
Oligotropha_carboxidovorans_OM5 1 1
Oligotropha_carboxidovorans_OM5 1 1
Rhodopseudomonas_palustris_DX-1 2 2
Rhodopseudomonas_palustris_TIE-1 2 2
Rhodopseudomonas_palustris_HaA2 1 1
Rhodopseudomonas_palustris_BisB5 2 2
Rhodopseudomonas_palustris_BisB18 1 1
Rhodopseudomonas_palustris_CGA009 2 2
Bradyrhizobium_sp._S23321 7 7
Bradyrhizobium_sp._BTAi1 6 6
Bradyrhizobium_oligotrophicum_S58 6 6
Bradyrhizobium_japonicum_USDA_6 5 5
Vibrio_nigripulchritudo_VibrioScope 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Alcanivorax_dieselolei_B5 1 1
Thalassolituus_oleivorans_MIL-1 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Klebsiella_pneumoniae_JM45 1 1
Enterobacter_aerogenes_EA1509E 1 1
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_4166 1 1
Pseudomonas_fluorescens_F113 1 1
Pseudomonas_fluorescens_Pf0-1 2 2
Acinetobacter_sp.__SH024 1 1
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_BJAB0868 1 1
Acinetobacter_baumannii_BJAB07104 1 1
Acinetobacter_baumannii_TCDC-AB0715 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii_1656-2 1 1
Acinetobacter_baumannii_MDR-ZJ06 1 1
Acinetobacter_baumannii_ACICU 1 1
Acinetobacter_radioresistens__SH164 1 1
Acinetobacter_johnsonii__SH046 1 1
Acinetobacter_lwoffii__SH145 1 1
Methylophaga_sp._JAM7 1 1
Caldisphaera_lagunensis_DSM_15908 1 1
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Sulfolobus_islandicus_LAL14/1 1 1
Sulfolobus_islandicus_REY15A 1 1
Sulfolobus_islandicus_HVE10/4 2 2
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 1 1
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 1 1
Sulfolobus_acidocaldarius_SUSAZ 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Thermococcus_litoralis_DSM_5473 3 3
Pyrococcus_sp._NA2 2 2
Pyrococcus_furiosus_DSM_3638 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 2 2
Natrinema_pellirubrum_DSM_15624 1 1
Natronococcus_occultus_SP4 5 5
Natronobacterium_gregoryi_SP2 3 3
Haloquadratum_walsbyi_C23 2 2
Haloarcula_hispanica_N601 1 1

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Longest transcript per gene
Genome     Number   Proteins
Arabidopsis_thaliana_10   (Thale cress)   2 2

Others
Genome     Number   Proteins
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 2 2
Malus_x_domestica_(Duplicate)   (Apple)   3 3
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 3 3
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
NCBI_plasmid_sequences_(Plasmids) 30 30
NCBI_viral_sequences_(Viral) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 1 1
STRING_v9.0.5_(STRING) 381 377
Uniprot_2018_03_genome 8724 8689
Protein_Data_Bank_(all_PDB_sequenc) 28 28
NCBI_2017_08_genome 18060 18020
TargetDB__(Targets) 32 32
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 80 80

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