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Domain combinations for AF2212/PG0164-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a AF2212/PG0164-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Capsaspora_owczarzaki_ATCC_30864_ 1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Acaryochloris_marina_MBIC11017 1 1
Synechocystis_sp._PCC_6803 1 1
Synechococcus_sp._PCC_6312 1 1
Gloeocapsa_sp._PCC_7428 1 1
Halothece_sp._PCC_7418 1 1
Microcystis_aeruginosa_NIES-843 3 3
Gloeobacter_violaceus_PCC_7421 1 1
Calothrix_sp._PCC_7507 2 2
'Nostoc_azollae'_0708 1 1
Nostoc_punctiforme_PCC_73102 1 1
Anabaena_sp._90 1 1
Ilumatobacter_coccineus 1 1
Nakamurella_multipartita_DSM_44233 1 1
Modestobacter_marinus 2 2
Geodermatophilus_obscurus_DSM_43160 2 2
Stackebrandtia_nassauensis_DSM_44728 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Streptosporangium_roseum_DSM_43021 1 1
Streptomyces_coelicolor_A3(2) 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_scabiei_87.22 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 5 5
Nocardioides_sp._JS614 1 1
Microlunatus_phosphovorus_NM-1 4 4
Salinispora_arenicola_CNS-205 2 2
Salinispora_tropica_CNB-440 1 1
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 2 2
Actinoplanes_missouriensis_431 2 2
Tsukamurella_paurometabola_DSM_20162 3 3
Gordonia_polyisoprenivorans_VH2 1 1
Rhodococcus_jostii_RHA1 2 2
Rhodococcus_opacus_B4 2 2
Rhodococcus_erythropolis_PR4 2 2
Nocardia_cyriacigeorgica_GUH-2 3 3
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 2 2
Mycobacterium_abscessus_ATCC_19977 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Beutenbergia_cavernae_DSM_12333 4 4
Leifsonia_xyli_subsp._xyli_str._CTCB07 1 1
Microbacterium_testaceum_StLB037 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2 2
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 1 1
Xylanimonas_cellulosilytica_DSM_15894 1 1
Cellulomonas_flavigena_DSM_20109 3 3
Cellulomonas_fimi_ATCC_484 3 3
[Cellvibrio]_gilvus_ATCC_13127 2 2
Arthrobacter_phenanthrenivorans_Sphe3 2 2
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 1 1
Arthrobacter_sp._Rue61a 1 1
Renibacterium_salmoninarum_ATCC_33209 1 1
Herpetosiphon_aurantiacus_DSM_785 1 1
Roseiflexus_castenholzii_DSM_13941 1 1
Deinococcus_gobiensis_I-0 1 1
Deinococcus_maricopensis_DSM_21211 1 1
Meiothermus_silvanus_DSM_9946 1 1
Meiothermus_ruber_DSM_1279 1 1
Desulfitobacterium_hafniense_Y51 2 2
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Eubacterium_limosum_KIST612 2 2
Clostridium_phytofermentans_ISDg 2 2
Alkaliphilus_oremlandii_OhILAs 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_cellulovorans_743B 2 2
Carnobacterium_sp._17-4 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecium_Aus0004 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_uberis_0140J 1 1
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_suis_P1/7 1 1
Paenibacillus_sp._JDR-2 1 1
Haliscomenobacter_hydrossis_DSM_1100 3 3
Niastella_koreensis_GR20-10 2 2
Chitinophaga_pinensis_DSM_2588 2 2
Belliella_baltica_DSM_15883 1 1
Marivirga_tractuosa_DSM_4126 1 1
Fibrella_aestuarina 1 1
Dyadobacter_fermentans_DSM_18053 2 2
Cytophaga_hutchinsonii_ATCC_33406 2 2
Spirosoma_linguale_DSM_74 5 5
Runella_slithyformis_DSM_19594 1 1
Paludibacter_propionicigenes_WB4 1 1
Porphyromonas_gingivalis_ATCC_33277 1 1
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 2 2
Solitalea_canadensis_DSM_3403 2 2
Pedobacter_heparinus_DSM_2366 2 2
Sphingobacterium_sp._21 4 4
Fluviicola_taffensis_DSM_16823 1 1
Maribacter_sp._HTCC2170 1 1
Polaribacter_sp._MED152 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Flavobacterium_indicum_GPTSA100-9 1 1
Planctomyces_limnophilus_DSM_3776 1 1
Rhodopirellula_baltica_SH_1 1 1
Turneriella_parva_DSM_21527 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Sphaerochaeta_globus_str._Buddy 1 1
Sphaerochaeta_coccoides_DSM_17374 1 1
Treponema_primitia_ZAS-2 3 3
Mesotoga_prima_MesG1.Ag.4.2 1 1
Thermovibrio_ammonificans_HB-1 1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Terriglobus_saanensis_SP1PR4 1 1
Terriglobus_roseus_DSM_18391 1 1
Sebaldella_termitidis_ATCC_33386 1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 1 1
Geobacter_lovleyi_SZ 1 1
Corallococcus_coralloides_DSM_2259 1 1
Cupriavidus_metallidurans_CH34 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Pusillimonas_sp._T7-7 1 1
Methylotenera_versatilis_301 1 1
Caulobacter_crescentus_NA1000 1 1
Phenylobacterium_zucineum_HLK1 1 1
Erythrobacter_litoralis_HTCC2594 1 1
Sphingopyxis_alaskensis_RB2256 2 2
Novosphingobium_sp._PP1Y 1 1
Novosphingobium_aromaticivorans_DSM_12444 1 1
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingomonas_wittichii_RW1 1 1
Sinorhizobium_fredii_NGR234 1 1
Mesorhizobium_loti_MAFF303099 1 1
Pelagibacterium_halotolerans_B2 1 1
Saccharophagus_degradans_2-40 1 1
Rhodanobacter_denitrificans 1 1
Pseudoxanthomonas_suwonensis_11-1 1 1
Xanthomonas_campestris_pv._campestris_str._B100 1 1
Pseudomonas_entomophila_L48 1 1
Pseudomonas_mendocina_ymp 1 1
Pyrolobus_fumarii_1A 6 6
Hyperthermus_butylicus_DSM_5456 2 2
Ignisphaera_aggregans_DSM_17230 6 6
Aeropyrum_pernix_K1 7 7
Methanocella_arvoryzae_MRE50 1 1
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 3 3
Methanosaeta_concilii_GP6 6 6
Methanospirillum_hungatei_JF-1 5 5
Ferroglobus_placidus_DSM_10642 5 5
Archaeoglobus_profundus_DSM_5631 1 1
Archaeoglobus_veneficus_SNP6 2 2
Archaeoglobus_fulgidus_DSM_4304 12 12
Thermococcus_sp._4557 5 5
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 6 6
Thermococcus_gammatolerans_EJ3 5 5
Thermococcus_sibiricus_MM_739 3 3
Thermococcus_barophilus_MP 4 4
Pyrococcus_yayanosii_CH1 2 2
Pyrococcus_abyssi_GE5 3 3
Pyrococcus_furiosus_COM1 4 4
Methanocaldococcus_vulcanius_M7 2 2
Methanocaldococcus_jannaschii_DSM_2661 2 2
Aciduliprofundum_boonei_T469 1 1

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Strains
Genome     Number   Proteins
Chroococcidiopsis_thermalis_PCC_7203 1 1
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 1 1
Synechocystis_sp._PCC_6803_substr._PCC-N 1 1
Synechocystis_sp._PCC_6803_substr._GT-I 1 1
Synechocystis_sp._PCC_6803 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 1 1
Arthrospira_platensis_NIES-39 2 2
Cyanothece_sp._PCC_7822 1 1
Cyanothece_sp._PCC_7425 3 3
Cyanothece_sp._PCC_7424 2 2
Cyanothece_sp._ATCC_51142 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Cylindrospermum_stagnale_PCC_7417 1 1
Frankia_sp._EuI1c 1 1
Streptomyces_davawensis_JCM_4913 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 1 1
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 2 2
Actinoplanes_friuliensis_DSM_7358 3 3
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 3 3
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Clavibacter_michiganensis_subsp._sepedonicus 2 2
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 2 2
Deinococcus_peraridilitoris_DSM_19664 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 3 3
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Enterococcus_faecium_Aus0085 1 1
Enterococcus_faecium_NRRL_B-2354 1 1
Enterococcus_faecium_DO 1 1
Lactobacillus_plantarum_16 1 1
Lactobacillus_plantarum_ZJ316 1 1
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactococcus_lactis_subsp._lactis_KLDS_4.0325 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._lactis_CV56 1 1
Lactococcus_lactis_subsp._lactis_KF147 1 1
Lactococcus_lactis_subsp._lactis_Il1403 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_UC509.9 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Emticicia_oligotrophica_DSM_17448 2 2
Porphyromonas_gingivalis_TDC60 1 1
Porphyromonas_gingivalis_W83 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Riemerella_anatipestifer_RA-CH-2 1 1
Riemerella_anatipestifer_RA-CH-1 1 1
Riemerella_anatipestifer_RA-GD 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Singulisphaera_acidiphila_DSM_18658 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Caulobacter_crescentus_CB15 1 1
Sinorhizobium_fredii_USDA_257 1 1
Sinorhizobium_fredii_HH103 1 1
Alcanivorax_dieselolei_B5 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 1 1
Xanthomonas_axonopodis_pv._citrumelo_F1 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 1 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_NBRC_14164 1 1
Aeropyrum_camini_SY1_=_JCM_12091 6 6
Archaeoglobus_sulfaticallidus_PM70-1 2 2
Thermococcus_sp._AM4 10 10
Thermococcus_sp._CL1 3 3
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 2 2
Pyrococcus_furiosus_DSM_3638 3 3

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Others
Genome     Number   Proteins
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
NCBI_plasmid_sequences_(Plasmids) 3 3
PDB_chains_(SCOP_1.75)_(PDB) 2 2
Protein_Data_Bank_(all_PDB_sequenc) 3 3
TargetDB__(Targets) 25 25
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 9 9
STRING_v9.0.5_(STRING) 158 158
Uniprot_2018_03_genome 4697 4696
NCBI_2017_08_genome 10111 10111

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