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Domain combinations for NE0471 N-terminal domain-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a NE0471 N-terminal domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Synechocystis_sp._PCC_6803 2 2
Synechococcus_sp._PCC_6312 2 2
Synechococcus_elongatus_PCC_7942 1 1
Trichodesmium_erythraeum_IMS101 1 1
Microcystis_aeruginosa_NIES-843 4 4
Nostoc_sp._PCC_7107 1 1
Eggerthella_lenta_DSM_2243 3 2
Slackia_heliotrinireducens_DSM_20476 1 1
Microlunatus_phosphovorus_NM-1 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_bifidum_S17 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Roseiflexus_sp._RS-1 2 2
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Truepera_radiovictrix_DSM_17093 1 1
Deinococcus_proteolyticus_MRP 1 1
Selenomonas_sputigena_ATCC_35185 3 3
Sulfobacillus_acidophilus_DSM_10332 1 1
Desulfosporosinus_orientis_DSM_765 4 4
Syntrophobotulus_glycolicus_DSM_8271 2 2
Desulfitobacterium_hafniense_Y51 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 2 2
Acetobacterium_woodii_DSM_1030 1 1
Clostridium_saccharolyticum_WM1 1 1
Eubacterium_rectale_M104/1 2 2
Eubacterium_rectale_ATCC_33656 2 2
Coprococcus_sp._ART55/1 1 1
Roseburia_hominis_A2-183 1 1
Butyrivibrio_fibrisolvens 2 2
Syntrophothermus_lipocalidus_DSM_12680 1 1
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 2 2
Alkaliphilus_metalliredigens_QYMF 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 4 4
Clostridium_novyi_NT 1 1
Clostridium_ljungdahlii_DSM_13528 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Moorella_thermoacetica_ATCC_39073 2 2
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Pelodictyon_phaeoclathratiforme_BU-1 9 9
Chlorobium_chlorochromatii_CaD3 7 7
Chlorobium_phaeobacteroides_DSM_266 7 7
Chlorobium_limicola_DSM_245 3 3
Chlorobaculum_parvum_NCIB_8327 1 1
Chlorobium_tepidum_TLS 1 1
Chloroherpeton_thalassium_ATCC_35110 2 2
Haliscomenobacter_hydrossis_DSM_1100 4 4
Cyclobacterium_marinum_DSM_745 2 2
Marivirga_tractuosa_DSM_4126 1 1
Dyadobacter_fermentans_DSM_18053 2 2
Spirosoma_linguale_DSM_74 3 3
Parabacteroides_distasonis_ATCC_8503 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2
Turneriella_parva_DSM_21527 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 1 1
Treponema_primitia_ZAS-2 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Candidatus_Methylomirabilis_oxyfera 2 2
Acidithiobacillus_ferrivorans_SS3 2 2
Acidithiobacillus_caldus_SM-1 2 2
Acidithiobacillus_ferrooxidans_ATCC_53993 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Desulfobacterium_autotrophicum_HRM2 2 2
Desulfococcus_oleovorans_Hxd3 1 1
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Geobacter_sp._M21 2 2
Geobacter_uraniireducens_Rf4 5 5
Geobacter_lovleyi_SZ 1 1
Geobacter_bemidjiensis_Bem 3 3
Geobacter_metallireducens_GS-15 1 1
Corallococcus_coralloides_DSM_2259 1 1
Aromatoleum_aromaticum_EbN1 1 1
Pseudogulbenkiania_sp._NH8B 1 1
Laribacter_hongkongensis_HLHK9 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 3 3
Verminephrobacter_eiseniae_EF01-2 1 1
Herbaspirillum_seropedicae_SmR1 1 1
Nitrosomonas_europaea_ATCC_19718 1 1
Gallionella_capsiferriformans_ES-2 4 4
Magnetococcus_marinus_MC-1 1 1
Caulobacter_sp._K31 1 1
Magnetospirillum_magneticum_AMB-1 1 1
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 3 3
Azospirillum_sp._B510 2 2
Acidiphilium_cryptum_JF-5 1 1
Rickettsia_felis_URRWXCal2 1 1
Methylobacterium_sp._4-46 1 1
Methylobacterium_populi_BJ001 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1
Rhodopseudomonas_palustris_BisA53 1 1
Aeromonas_veronii_B565 1 1
Aeromonas_salmonicida_subsp._salmonicida_A449 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Aliivibrio_salmonicida_LFI1238 1 1
Vibrio_cholerae_O395 1 1
Shewanella_woodyi_ATCC_51908 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 1 1
Marinobacter_aquaeolei_VT8 1 1
Alteromonas_macleodii_str._'Deep_ecotype' 1 1
Marinomonas_sp._MWYL1 1 1
Methylomicrobium_alcaliphilum 4 4
Halothiobacillus_neapolitanus_c2 1 1
Allochromatium_vinosum_DSM_180 2 2
Thiocystis_violascens_DSM_198 7 7
Nitrosococcus_halophilus_Nc4 4 4
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Edwardsiella_ictaluri_93-146 1 1
Edwardsiella_tarda_EIB202 1 1
Dickeya_zeae_Ech1591 1 1
Azotobacter_vinelandii_DJ 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Thioalkalimicrobium_cyclicum_ALM1 1 1

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Strains
Genome     Number   Proteins
Synechocystis_sp._PCC_6803_substr._PCC-P 2 2
Synechocystis_sp._PCC_6803_substr._PCC-N 2 2
Synechocystis_sp._PCC_6803_substr._GT-I 2 2
Synechocystis_sp._PCC_6803 2 2
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_elongatus_PCC_6301 1 1
Crinalium_epipsammum_PCC_9333 1 1
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 1 1
Cyanothece_sp._PCC_7822 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Thermus_oshimai_JL-2 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Ruminococcus_champanellensis_18P13 1 1
Sulfobacillus_acidophilus_TPY 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 2 2
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 4 4
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_tetani_genome_12124569 1 1
Echinicola_vietnamensis_DSM_17526 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2
Acidithiobacillus_ferrooxidans_ATCC_23270 1 1
Desulfobacula_toluolica_Tol2 1 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 2 2
Geobacter_sp._M18 2 2
Myxococcus_stipitatus_DSM_14675 1 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 5 5
Alicycliphilus_denitrificans_BC 1 1
Sulfuricella_denitrificans_skB26 1 1
Rhodospirillum_rubrum_ATCC_11170 1 1
Rhizobium_tropici_CIAT_899 1 1
Rhodopseudomonas_palustris_BisB5 1 1
Rhodopseudomonas_palustris_BisB18 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 2 2
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Thioflavicoccus_mobilis_8321 2 2
Legionella_pneumophila_subsp._pneumophila 1 1
Dickeya_dadantii_Ech586 1 1
Dickeya_dadantii_3937 1 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 1 1
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_fluorescens_F113 1 1
Pseudomonas_fluorescens_Pf0-1 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 9 9
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
STRING_v9.0.5_(STRING) 130 129
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Uniprot_2018_03_genome 2945 2937
NCBI_2017_08_genome 4157 4147
Protein_Data_Bank_(all_PDB_sequenc) 2 2
TargetDB__(Targets) 4 4

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