SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Oxysterol-binding protein-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Oxysterol-binding protein-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   62 62
Pan_troglodytes_76_2.1.4   (Chimpanzee)   11 11
Gorilla_gorilla_76_3.1   (Western gorilla)   16 16
Pongo_abelii_76_2   (Sumatran orangutan)   12 12
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   13 13
Papio_anubis_76   (Olive baboon)   15 15
Macaca_mulatta_76_1   (Rhesus monkey)   30 30
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   38 38
Otolemur_garnettii_76_3   (Small-eared galago)   13 13
Microcebus_murinus_76_1   (Gray mouse lemur)   14 11
Rattus_norvegicus_76_5.0   (Norway rat)   12 12
Mus_musculus_76_38   (House mouse)   40 40
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   17 12
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   12 11
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   15 15
Cavia_porcellus_76_3   (Domestic guinea pig)   12 12
Oryctolagus_cuniculus_76_2   (Rabbit)   13 13
Ochotona_princeps_76   (American pika)   13 11
Tupaia_belangeri_76   (Northern tree shrew)   13 10
Sus_scrofa_76_10.2   (Pig)   13 13
Bos_taurus_76_3.1   (Cattle)   15 15
Ovis_aries_76_3.1   (Sheep)   14 13
Vicugna_pacos_76_1   (Alpaca)   10 7
Tursiops_truncatus_76_1   (Bottlenose dolphin)   13 12
Mustela_putorius_furo_76_1.0   (Domestic ferret)   13 13
Ailuropoda_melanoleuca_76_1   (Giant panda)   14 14
Canis_familiaris_76_3.1   (Dog)   16 16
Felis_catus_76_6.2   (Domestic cat)   13 13
Equus_caballus_76_2   (Horse)   15 15
Myotis_lucifugus_76_2.0   (Little brown bat)   11 11
Pteropus_vampyrus_76_1   (Large flying fox)   12 12
Sorex_araneus_76_1   (European shrew)   12 9
Erinaceus_europaeus_76   (Western European hedgehog)   17 11
Procavia_capensis_76_1   (Cape rock hyrax)   17 12
Loxodonta_africana_76_3   (African savanna elephant)   17 17
Echinops_telfairi_76   (Small Madagascar hedgehog)   14 12
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   15 15
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   14 10
Macropus_eugenii_76_1.0   (Tammar wallaby)   20 12
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   15 14
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   14 14
Ornithorhynchus_anatinus_76_5   (Platypus)   12 12
Saccoglossus_kowalevskii_v3.0 11 11
Petromyzon_marinus_76_7.0   (Sea lamprey)   9 9
Meleagris_gallopavo_76_2   (Turkey)   12 12
Gallus_gallus_76_4   (Chicken)   12 12
Anas_platyrhynchos_76_1.0   (Mallard)   12 12
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   13 13
Ficedula_albicollis_76_1.0   (Collared flycatcher)   11 11
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   16 16
Anolis_carolinensis_76_2.0   (Green anole)   12 12
Xenopus_laevis_   (African clawed frog)   13 13
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   15 15
Latimeria_chalumnae_76_1   (Coelacanth)   21 21
Lepisosteus_oculatus_76   (Spotted gar)   15 15
Gadus_morhua_76_1   (Atlantic cod)   23 21
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   31 31
Takifugu_rubripes_76_4   (Torafugu)   89 86
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   27 27
Oryzias_latipes_76_1   (Japanese medaka)   24 24
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   18 18
Poecilia_formosa_76   (Amazon molly)   18 18
Oreochromis_niloticus_76_1.0   (Nile tilapia)   27 27
Astyanax_mexicanus_76   (Mexican tetra)   21 20
Danio_rerio_76_9   (Zebrafish)   30 30
Oikopleura_dioica 3 3
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   16 16
Ciona_intestinalis_76   (Vase tunicate)   7 7
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   12 10
Adineta_vaga 25 24
Octopus_bimaculoides_280 13 12
Crassostrea_gigas_22   (Pacific oyster)   5 4
Lottia_gigantea_   (Owl limpet)   6 6
Helobdella_robusta_ 7 7
Capitella_sp._I_ 7 7
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6 6
Heliconius_melpomene_   (Postman butterfly)   4 4
Bombyx_mori_   (Domestic silkworm)   8 8
Nasonia_vitripennis_   (Jewel wasp)   4 4
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   8 8
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   4 4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   4 4
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4 4
Atta_cephalotes_v1.1 4 4
Camponotus_floridanus_v3.3   (Florida carpenter ant)   4 4
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 5 5
Drosophila_willistoni_1.3 4 4
Drosophila_pseudoobscura_2.13 4 4
Drosophila_persimilis_1.3 4 4
Drosophila_suzukii 4 4
Drosophila_yakuba_1.3 5 5
Drosophila_simulans_1.3 3 3
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_76_5   (Fruit fly)   14 14
Drosophila_erecta_1.3 4 4
Drosophila_ananassae_1.3 4 4
Drosophila_virilis_1.2 4 4
Drosophila_mojavensis_1.3 5 5
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   4 4
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   4 4
Anopheles_darlingi_22   (American malaria mosquito)   4 4
Anopheles_gambiae_49_3j   (African malaria mosquito)   4 4
Tribolium_castaneum_3.0   (Red flour beetle)   5 5
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   6 5
Acyrthosiphon_pisum_   (Pea aphid)   3 3
Rhodnius_prolixus_22 6 6
Daphnia_pulex_   (Common water flea)   12 12
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 5 5
Tetranychus_urticae_   (Two-spotted spider mite)   5 5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   8 7
Pristionchus_pacificus_ 5 5
Meloidogyne_incognita_   (Southern root-knot nematode)   3 3
Meloidogyne_hapla_ 2 2
Onchocerca_volvulus_22 5 5
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9 9
Caenorhabditis_japonica_ 3 3
Caenorhabditis_brenneri_ 6 6
Caenorhabditis_remanei_ 4 4
Caenorhabditis_elegans_76_235   (Roundworm)   13 13
Caenorhabditis_briggsae_2 4 4
Trichinella_spiralis_22 8 7
Hymenolepis_microstoma_ 5 5
Echinococcus_multilocularis_ 5 5
Echinococcus_granulosus_ 5 5
Taenia_solium_   (Pork tapeworm)   6 6
Schistosoma_mansoni_ 7 7
Mnemiopsis_leidyi   (Sea walnut)   5 5
Thelohanellus_kitauei 5 5
Acropora_digitifera_v1.0 8 8
Nematostella_vectensis_1.0   (Starlet sea anemone)   7 7
Hydra_vulgaris 7 7
Amphimedon_queenslandica 6 6
Trichoplax_adhaerens_ 6 6
Proterospongia_sp._ATCC_50818_ 4 4
Monosiga_brevicollis_ 4 4
Sphaeroforma_arctica_JP610_ 5 5
Capsaspora_owczarzaki_ATCC_30864_ 10 9
Conidiobolus_coronatus_NRRL28638_v1.0 4 4
Mortierella_verticillata_NRRL_6337_ 6 6
Phycomyces_blakesleeanus_ 9 9
Rhizopus_oryzae_RA_99-880_ 8 8
Mucor_circinelloides_ 12 12
Rhizomucor_miehei_CAU432_ 6 6
Malassezia_globosa_CBS_7966_ 8 8
Sporisorium_reilianum_22 5 5
Ustilago_maydis_ 5 5
Mixia_osmundae_IAM_14324_v1.0 5 5
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 5
Melampsora_laricis-populina_ 6 6
Rhodotorula_graminis_WP1_v1.0 5 5
Sporobolomyces_roseus_IAM_13481_ 5 5
Microbotryum_violaceum_22 5 5
Wallemia_sebi_v1.0 4 4
Sphaerobolus_stellatus_v1.0 7 7
Piloderma_croceum_F_1598_v1.0 6 5
Serpula_lacrymans_var._lacrymans_S7.9_ 5 5
Coniophora_puteana 5 5
Hydnomerulius_pinastri_v2.0 5 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 5 5
Pisolithus_microcarpus_441_v1.0 5 5
Pisolithus_tinctorius_Marx_270_v1.0 5 5
Scleroderma_citrinum_Foug_A_v1.0 5 5
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   5 5
Amanita_thiersii_Skay4041_v1.0 4 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   5 5
Galerina_marginata_v1.0 5 5
Hebeloma_cylindrosporum_h7_v2.0 5 5
Laccaria_bicolor_S238N-H82_ 7 7
Agaricus_bisporus_var._bisporus_ 5 5
Schizophyllum_commune_ 5 5
Stereum_hirsutum_FP-91666_SS1__v1.0 5 5
Heterobasidion_annosum_ 5 5
Gloeophyllum_trabeumv1.0 5 5
Punctularia_strigosozonata_v1.0 4 4
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 5 5
Tulasnella_calospora_AL13/4D_v1.0 6 6
Postia_placenta_ 8 8
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 5 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5 5
Phanerochaete_chrysosporium_RP-78_2.1 5 5
Dichomitus_squalens 4 4
Trametes_versicolor_v1.0 5 5
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 7 7
Apiospora_montagnei_NRRL_25634_v1.0 8 8
Magnaporthe_poae_ATCC_64411_22 5 5
Magnaporthe_grisea_70-15_ 6 6
Podospora_anserina_ 6 6
Sporotrichum_thermophile_ATCC_42464_ 6 6
Thielavia_terrestris_NRRL_8126_ 6 6
Chaetomium_globosum_CBS_148.51_ 7 7
Neurospora_tetrasperma_ 6 6
Neurospora_discreta_FGSC_8579_ 6 6
Neurospora_crassa_OR74A_ 6 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   7 7
Verticillium_albo-atrum_VaMs.102_ 7 6
Verticillium_dahliae_VdLs.17_ 6 6
Acremonium_alcalophilumv_1.0 5 5
Glomerella_graminicola_22 6 6
Fusarium_graminearum_ 7 7
Nectria_haematococca_mpVI_ 7 7
Fusarium_oxysporum_f._sp._lycopersici_4286_ 7 7
Fusarium_verticillioides_7600_ 7 7
Trichoderma_asperellum_CBS_433.97_v1.0 5 5
Trichoderma_atroviride_ 5 5
Trichoderma_citrinoviride_v1.0 5 5
Trichoderma_reesei_1.2 5 5
Trichoderma_virens_Gv29-8_ 5 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5 5
Trichoderma_harzianum_CBS_226.95_v1.0 5 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   6 6
Botrytis_cinerea_B05.10_ 6 6
Sclerotinia_sclerotiorum_ 6 6
Blumeria_graminis_22 5 5
Didymella_exigua_CBS_183.55_v1.0 6 6
Leptosphaeria_maculans_22 5 5
Setosphaeria_turcica_v1.0 6 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 6 6
Cochliobolus_victoriae_FI3_v1.0 6 6
Cochliobolus_carbonum_26-R-13_v1.0 6 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 6
Alternaria_brassicicola_ 6 6
Cochliobolus_lunatus_m118_v2.0 6 6
Pyrenophora_teres_f._teres_22 6 6
Pyrenophora_tritici-repentis_ 6 6
Stagonospora_nodorum_ 6 6
Mycosphaerella_graminicola_IPO323_ 6 6
Zasmidium_cellare_ATCC_36951_v1.0 6 6
Dothistroma_septosporum 7 6
Septoria_musiva_v1.0 6 6
Mycosphaerella_fijiensis_CIRAD86_ 6 6
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 5 5
Paracoccidioides_brasiliensis_Pb18_ 5 5
Coccidioides_posadasii_RMSCC_3488_ 5 5
Coccidioides_immitis_RS_ 5 5
Ajellomyces_dermatitidis_SLH14081_ 5 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5 5
Microsporum_canis_CBS_113480_ 4 4
Trichophyton_equinum_CBS_127.97_ 5 5
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 5 5
Aspergillus_zonatus_v1.0 5 5
Penicillium_chrysogenum_Wisconsin_54-1255_ 4 4
Penicillium_chrysogenum_v1.0 4 4
Aspergillus_acidus_v1.0 5 5
Aspergillus_fumigatus_Af293 5 5
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 5 5
Aspergillus_sydowii_v1.0 5 5
Aspergillus_versicolor_v1.0 5 5
Aspergillus_glaucus 5 5
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 5 5
Aspergillus_terreus_NIH2624_ 5 5
Aspergillus_tubingensis_v1.0 5 5
Aspergillus_wentii_v1.0 5 5
Aspergillus_oryzae_RIB40_ 5 5
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 5 5
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 8 8
Tuber_melanosporum_Mel28_22 5 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   5 5
Hansenula_polymorpha_v2.0 4 4
Dekkera_bruxellensis_CBS_2499_v2.0 4 4
Pichia_membranifaciensv1.0 4 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4 4
Candida_dubliniensis_CD36_ 4 4
Candida_tropicalis_MYA-3404_ 5 5
Candida_parapsilosis_ 4 4
Candida_albicans_SC5314 4 4
Lodderomyces_elongisporus_NRRL_YB-4239_ 4 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 4 4
Candida_guilliermondii_ATCC_6260_ 4 4
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 4 4
Debaromyces_hansenii 4 4
Wickerhamomyces_anomalus 5 5
Pichia_pastoris_GS115_ 3 3
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 5 4
Yarrowia_lipolytica_CLIB122 4 4
Candida_lusitaniae_ATCC_42720_ 4 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 3 3
Vanderwaltozyma_polyspora_DSM_70294_ 6 6
Candida_glabrata_CBS138 6 6
Kluyveromyces_thermotolerans_CBS_6340 4 4
Lachancea_kluyveri_ 4 4
Kluyveromyces_waltii 4 4
Ashbya_gossypii_ATCC_10895_ 4 4
Zygosaccharomyces_rouxii_ 4 4
Saccharomyces_mikatae_MIT 8 8
Saccharomyces_paradoxus_MIT 8 8
Saccharomyces_cerevisiae_76   (Baker's yeast)   7 7
Saccharomyces_bayanus_MIT 7 7
Kluyveromyces_lactis 4 4
Schizosaccharomyces_cryophilus_OY26_22 6 6
Schizosaccharomyces_octosporus_yFS286_ 7 6
Schizosaccharomyces_japonicus_yFS275_ 6 6
Schizosaccharomyces_pombe   (Fission yeast)   6 6
Catenaria_anguillulae_PL171_v1.0 6 6
Allomyces_macrogynus_ATCC_38327_ 12 12
Spizellomyces_punctatus_DAOM_BR117_ 4 4
Dictyostelium_discoideum 12 12
Dictyostelium_purpureum_ 12 12
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 6 6
Entamoeba_histolytica_1 4 4
Selaginella_moellendorffii_ 8 8
Pinus_taeda   (Loblolly pine)   8 7
Picea_abies   (Norway spruce)   7 7
Eucalyptus_grandis_v201   (Rose gum)   12 12
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7 6
Gossypium_raimondii_v221 54 54
Citrus_clementina_v165 11 11
Citrus_sinensis_v154   (Sweet orange)   20 20
Thellungiella_halophila_v173 12 12
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   16 15
Capsella_rubella_v183 11 11
Arabidopsis_lyrata_   (Lyrate rockcress)   13 13
Arabidopsis_thaliana_10   (Thale cress)   21 21
Carica_papaya_   (Papaya)   8 8
Medicago_truncatula_   (Barrel medic)   25 25
Phaseolus_vulgaris_v186   (French bean)   14 14
Glycine_max_v109   (Soybean)   30 30
Cucumis_sativus_v122   (Cucumber)   15 15
Fragaria_vesca_   (Wild strawberry)   6 6
Malus_domestica_v196   (Apple)   14 13
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   12 12
Manihot_esculenta_v147   (Cassava)   10 10
Populus_trichocarpa_v156   (Black cottonwood)   17 17
Vitis_vinifera_   (Wine grape)   8 8
Mimulus_guttatus_v140   (Spotted monkey flower)   9 9
Solanum_lycopersicum_v.2.3   (Tomato)   7 7
Solanum_tuberosum_   (Potato)   15 15
Actinidia_chinensis_Hongyang_ 11 11
Aquilegia_coerulea_v195 10 10
Triticum_urartu_22 9 7
Triticum_aestivum_22   (Bread wheat)   28 28
Aegilops_tauschii_22 9 6
Brachypodium_distachyon_   (Stiff brome)   9 9
Oryza_barthii_22   (African wild rice)   12 10
Oryza_meridionalis_22 13 13
Oryza_glumaepatula_22 12 11
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 15 15
Oryza_nivara_22 10 9
Oryza_brachyantha_22   (Malo sina)   7 7
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   8 8
Oryza_sativa_v193   (Rice)   8 8
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   14 13
Panicum_virgatum_v202   (Switchgrass)   15 15
Setaria_italica_v164   (Foxtail millet)   9 9
Zea_mays_subsp._mays_   (Maize)   31 31
Zea_mays_v181   (Maize)   40 40
Sorghum_bicolor_   (Sorghum)   7 7
Musa_balbisiana   (Balbis banana)   16 13
Musa_acuminata_22   (Wild Malaysian banana)   13 13
Amborella_trichopoda_22 7 7
Physcomitrella_patens 11 11
Coccomyxa_subellipsoidea_sp._C-169_v2 12 12
Asterochloris_sp._Cgr/DA1pho_v1.0 3 3
Chlorella_variabilis_sp._NC64A_ 3 3
Chlorella_vulgaris_ 13 12
Volvox_carteri_f._nagariensis_ 3 3
Volvox_carteri_v199 5 4
Chlamydomonas_reinhardtii_4.0 4 4
Ostreococcus_sp._RCC809_ 4 4
Ostreococcus_lucimarinus_CCE9901_ 4 4
Ostreococcus_tauri_ 4 4
Bathycoccus_prasinos_ 2 2
Micromonas_sp._RCC299_ 4 4
Micromonas_pusilla_CCMP1545_v3.0 3 3
Cyanidioschyzon_merolae_strain_10D_22 4 3
Cyanidioschyzon_merolae 4 3
Porphyridium_purpureum_02_2012 6 6
Thecamonas_trahens_ATCC_50062_ 2 2
Bigelowiella_natans_CCMP2755_22 1 1
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 10 10
Trypanosoma_cruzi_strain_CL_Brener 1 1
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 4 4
Pythium_ultimum_v1.7-2 2 2
Pythium_aphanidermatum_DAOM_BR444_22 3 3
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   2 2
Phytophthora_sojae_1.1 2 2
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 2 2
Hyaloperonospora_arabidopsidis_22 1 1
Paramecium_tetraurelia_ 45 45
Tetrahymena_thermophila_SB210_1_ 12 12
Ichthyophthirius_multifiliis_strain_G5_ 13 13
Cryptosporidium_hominis 2 2
Cryptosporidium_muris 2 2
Cryptosporidium_parvum_Iowa_II 2 2
Neospora_caninum 4 3
Toxoplasma_gondii_VEG 3 2
Toxoplasma_gondii_ME49 4 3
Toxoplasma_gondii_GT1 3 2
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 3 2
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 2 1
Plasmodium_chabaudi_ 2 1
Plasmodium_berghei_ANKA_ 2 1
Naegleria_gruberi_ 4 4
Trichomonas_vaginalis_ 5 5
Guillardia_theta_CCMP2712_v1.0_ 6 6

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   18 18
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   13 13
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   5 5
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   8 7
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   10 10
Cryptococcus_neoformans_var._grubii_H99_ 4 4
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 3 3
Paracoccidioides_brasiliensis_Pb01_ 5 5
Paracoccidioides_brasiliensis_Pb03_ 5 5
Coccidioides_posadasii_str._Silveira_ 5 5
Coccidioides_immitis_RMSCC_3703_ 6 5
Coccidioides_immitis_RMSCC_2394_ 5 5
Coccidioides_immitis_H538.4_ 5 5
Ajellomyces_dermatitidis_ER-3_ 5 5
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 4 4
Histoplasma_capsulatum_G186AR 4 4
Aspergillus_fumigatus_A1163_ 5 5
Candida_albicans_WO-1_ 4 4
Saccharomyces_cerevisiae_UC5 6 6
Saccharomyces_cerevisiae_PW5 5 5
Saccharomyces_cerevisiae_FL100 5 5
Saccharomyces_cerevisiae_CLIB324 4 4
Saccharomyces_cerevisiae_CBS7960 6 6
Saccharomyces_cerevisiae_YJM269 5 5
Saccharomyces_cerevisiae_T7 6 6
Saccharomyces_cerevisiae_FostersB 5 5
Saccharomyces_cerevisiae_FostersO 5 5
Saccharomyces_cerevisiae_VL3 4 4
Saccharomyces_cerevisiae_Vin13 6 6
Saccharomyces_cerevisiae_LalvinQA23 6 6
Saccharomyces_cerevisiae_AWRI796 5 5
Saccharomyces_cerevisiae_Sigma1278b 6 6
Saccharomyces_cerevisiae_W303 7 7
Saccharomyces_cerevisiae_JAY291 6 6
Saccharomyces_cerevisiae_AWRI1631 3 3
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_M22 2 2
Saccharomyces_cerevisiae_T73 3 3
Saccharomyces_cerevisiae_CLIB215 4 4
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 7 7
Saccharomyces_cerevisiae_YJM789 7 7
Saccharomyces_cerevisiae_RM11-1a 6 6
Saccharomyces_cerevisiae_RM11-1a_ 7 7
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   7 7
Schizosaccharomyces_pombe_972h-_ 6 6
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   7 6
Hordeum_vulgare_22   (Domesticated barley)   26 25
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   8 7
Neospora_caninum_Nc-Liverpool_6.2 4 3
Plasmodium_falciparum_HB3_ 3 2
Plasmodium_falciparum_Dd2_ 3 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   12 12
Pan_troglodytes_69_2.1.4   (Chimpanzee)   11 11
Gorilla_gorilla_69_3.1   (Western gorilla)   12 12
Pongo_abelii_69_2   (Sumatran orangutan)   12 12
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   12 12
Macaca_mulatta_69_1   (Rhesus monkey)   12 12
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   13 13
Otolemur_garnettii_69_3   (Small-eared galago)   12 12
Microcebus_murinus_69_1   (Gray mouse lemur)   14 11
Rattus_norvegicus_69_3.4   (Norway rat)   12 12
Mus_musculus_69_38   (House mouse)   12 12
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   17 12
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   11 10
Cavia_porcellus_69_3   (Domestic guinea pig)   12 12
Oryctolagus_cuniculus_69_2   (Rabbit)   12 12
Ochotona_princeps_69   (American pika)   13 11
Tupaia_belangeri_69   (Northern tree shrew)   13 10
Sus_scrofa_69_10.2   (Pig)   11 11
Bos_taurus_69_3.1   (Cattle)   12 12
Vicugna_pacos_69_1   (Alpaca)   10 7
Tursiops_truncatus_69_1   (Bottlenose dolphin)   13 12
Mustela_putorius_furo_69_1.0   (Domestic ferret)   12 12
Ailuropoda_melanoleuca_69_1   (Giant panda)   13 13
Canis_familiaris_69_3.1   (Dog)   12 12
Felis_catus_69   (Domestic cat)   14 12
Equus_caballus_69_2   (Horse)   13 13
Myotis_lucifugus_69_2.0   (Little brown bat)   11 11
Pteropus_vampyrus_69_1   (Large flying fox)   12 12
Sorex_araneus_69_1   (European shrew)   12 9
Erinaceus_europaeus_69   (Western European hedgehog)   17 11
Procavia_capensis_69_1   (Cape rock hyrax)   17 12
Loxodonta_africana_69_3   (African savanna elephant)   12 12
Echinops_telfairi_69   (Small Madagascar hedgehog)   14 12
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   15 12
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   14 10
Macropus_eugenii_69_1.0   (Tammar wallaby)   20 12
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   13 12
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   14 14
Ornithorhynchus_anatinus_69_5   (Platypus)   10 10
Petromyzon_marinus_69_7.0   (Sea lamprey)   9 9
Meleagris_gallopavo_69_2   (Turkey)   12 12
Gallus_gallus_69_2   (Chicken)   11 11
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   13 13
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   12 12
Anolis_carolinensis_69_2.0   (Green anole)   12 12
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   11 11
Latimeria_chalumnae_69_1   (Coelacanth)   12 12
Gadus_morhua_69_1   (Atlantic cod)   21 19
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   20 20
Takifugu_rubripes_69_4   (Torafugu)   21 19
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   18 18
Oryzias_latipes_69_1   (Japanese medaka)   18 18
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   18 18
Oreochromis_niloticus_69_1.0   (Nile tilapia)   18 18
Danio_rerio_69_9   (Zebrafish)   18 18
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   5 5
Ciona_intestinalis_69   (Vase tunicate)   7 7
Drosophila_melanogaster_69_5   (Fruit fly)   4 4
Caenorhabditis_elegans_69_215   (Roundworm)   4 4
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   7 7
Arabidopsis_thaliana_10   (Thale cress)   12 12

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   69 69
Homo_sapiens__(NCBI_version)   (Human)   32 32
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   12 12
Loa_loa_v3.3_(Request)   (Eye worm)   7 7
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   8 8
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7 7
Moniliophthora_perniciosa_FA553__(Genome_survey) 9 9
Picea_sitchensis__(Incomplete)   (Sitka spruce)   1 1
Lotus_japonicus__(Early_assembly) 10 10
Malus_x_domestica_(Duplicate)   (Apple)   14 13
Ricinus_communis__(Early_assembly)   (Castor bean)   5 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 15 15
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   6 6
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   7 7
Phoenix_dactylifera__(Early_draft)   (Date palm)   10 10
Protozoadb_2010_08_(Protozoadb) 69 61
STRING_v9.0.5_(STRING) 804 788
TargetDB__(Targets) 30 29
Uniprot_2018_03_genome 11802 11574
NCBI_2017_08_genome 14071 13848
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 42 42
PDB_chains_(SCOP_1.75)_(PDB) 2 2
Protein_Data_Bank_(all_PDB_sequenc) 26 26

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]