SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for PG0775 C-terminal domain-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a PG0775 C-terminal domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 1 1
Paludibacter_propionicigenes_WB4 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1 1
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 1 1
Porphyromonas_asaccharolytica_DSM_20707 1 1
Porphyromonas_gingivalis_ATCC_33277 1 1
Alistipes_finegoldii_DSM_17242 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_helcogenes_P_36-108 1 1
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Bacteroides_fragilis_YCH46 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Treponema_primitia_ZAS-2 1 1
Thiocystis_violascens_DSM_198 1 1

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Strains
Genome     Number   Proteins
Prevotella_sp._oral_taxon_299_str._F0039 1 1
Prevotella_dentalis_DSM_3688 1 1
Porphyromonas_gingivalis_TDC60 1 1
Porphyromonas_gingivalis_W83 1 1
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Thioflavicoccus_mobilis_8321 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 6 6
STRING_v9.0.5_(STRING) 13 13
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Uniprot_2018_03_genome 722 722
NCBI_2017_08_genome 862 862
TargetDB__(Targets) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 2 2

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