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Domain combinations for NEAT domain-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a NEAT domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Aspergillus_zonatus_v1.0 7 4
Ruminococcus_sp. 1 1
Syntrophobotulus_glycolicus_DSM_8271 11 5
[Ruminococcus]_obeum 1 1
[Ruminococcus]_torques 1 1
Eubacterium_rectale_M104/1 1 1
Roseburia_intestinalis 1 1
Clostridium_novyi_NT 8 4
Clostridium_tetani_E88 8 2
Clostridium_perfringens_ATCC_13124 5 2
Leuconostoc_kimchii_IMSNU_11154 3 2
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_fermentum_IFO_3956 4 2
Lactobacillus_buchneri_NRRL_B-30929 3 2
Lactobacillus_buchneri 3 2
Lactobacillus_brevis_ATCC_367 4 3
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1
Streptococcus_pyogenes_str._Manfredo 1 1
Paenibacillus_sp._JDR-2 6 4
Paenibacillus_terrae_HPL-003 11 4
Paenibacillus_polymyxa_M1 13 4
Listeria_welshimeri_serovar_6b_str._SLCC5334 4 2
Listeria_innocua_Clip11262 4 2
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 4 2
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 4 2
Listeria_ivanovii_subsp._ivanovii_PAM_55 4 2
Solibacillus_silvestris_StLB046 3 2
Lysinibacillus_sphaericus_C3-41 5 3
Bacillus_halodurans_C-125 6 2
Bacillus_weihenstephanensis_KBAB4 11 6
Bacillus_thuringiensis_str._Al_Hakam 9 5
Bacillus_cereus_03BB102 8 4
Bacillus_anthracis_str._A0248 8 4
Bacillus_clausii_KSM-K16 5 2
Staphylococcus_lugdunensis_HKU09-01 12 8
Staphylococcus_aureus_subsp._aureus_JH1 7 4
Staphylococcus_aureus 7 4

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Strains
Genome     Number   Proteins
Roseburia_intestinalis_XB6B4 1 1
Clostridium_tetani_genome_12124569 8 2
Clostridium_perfringens_SM101 5 2
Clostridium_perfringens_str._13 5 2
Clostridium_botulinum_BKT015925 13 5
Clostridium_botulinum_E3_str._Alaska_E43 6 1
Carnobacterium_maltaromaticum_LMA28 5 2
Lactobacillus_fermentum_F-6 4 2
Lactobacillus_fermentum_CECT_5716 3 1
Lactobacillus_brevis_KB290 4 3
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 2 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 2 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1 1
Streptococcus_iniae_SF1 2 1
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 2 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 2 1
Streptococcus_pyogenes_MGAS10394 2 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Paenibacillus_polymyxa_CR1 3 3
Paenibacillus_polymyxa_SC2 13 4
Paenibacillus_polymyxa_E681 10 4
Listeria_monocytogenes_EGD_sequence 4 2
Listeria_monocytogenes_N53-1 4 2
Listeria_monocytogenes_La111 4 2
Listeria_monocytogenes_serotype_4b_str._LL195 4 2
Listeria_monocytogenes_07PF0776 4 2
Listeria_monocytogenes_M7 4 2
Listeria_monocytogenes_J1-220 4 2
Listeria_monocytogenes_J1816 4 2
Listeria_monocytogenes_SLCC2376 4 2
Listeria_monocytogenes_SLCC5850 4 2
Listeria_monocytogenes_ATCC_19117 4 2
Listeria_monocytogenes_L312 4 2
Listeria_monocytogenes_SLCC2479 4 2
Listeria_monocytogenes_SLCC7179 4 2
Listeria_monocytogenes_SLCC2540 4 2
Listeria_monocytogenes_SLCC2378 4 2
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 4 2
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 4 2
Listeria_monocytogenes_serotype_7_str._SLCC2482 4 2
Listeria_monocytogenes_08-5578 4 2
Listeria_monocytogenes_08-5923 4 2
Listeria_monocytogenes_L99 4 2
Listeria_monocytogenes_HCC23 4 2
Listeria_monocytogenes_10403S 4 2
Listeria_monocytogenes_J0161 4 2
Listeria_monocytogenes_Finland_1998 4 2
Listeria_monocytogenes_FSL_R2-561 4 2
Listeria_monocytogenes_serotype_4b_str._F2365 4 2
Listeria_monocytogenes_EGD-e 4 2
Bacillus_toyonensis_BCT-7112 9 5
Bacillus_thuringiensis_HD-771 9 5
Bacillus_thuringiensis_HD-789 9 5
Bacillus_thuringiensis_MC28 9 5
Bacillus_thuringiensis_serovar_chinensis_CT-43 9 5
Bacillus_thuringiensis_YBT-1518 9 5
Bacillus_thuringiensis_Bt407 9 6
Bacillus_thuringiensis_serovar_konkukian_str._97-27 9 5
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 8 5
Bacillus_thuringiensis_BMB171 9 5
Bacillus_thuringiensis_serovar_finitimus_YBT-020 10 5
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 9 5
Bacillus_cereus_FRI-35 9 5
Bacillus_cereus_biovar_anthracis_str._CI 11 7
Bacillus_cereus_AH820 9 5
Bacillus_cereus_AH187 9 5
Bacillus_cereus_B4264 9 5
Bacillus_cereus_G9842 9 5
Bacillus_cereus_Q1 9 5
Bacillus_cereus_F837/76 9 5
Bacillus_cereus_NC7401 9 5
Bacillus_cereus_E33L 9 5
Bacillus_cereus_ATCC_14579 8 4
Bacillus_cereus_ATCC_10987 9 5
Bacillus_anthracis_str._H9401 12 8
Bacillus_anthracis_str._CDC_684 12 8
Bacillus_anthracis_str._'Ames_Ancestor' 10 6
Bacillus_anthracis_str._Sterne 9 5
Bacillus_anthracis_str._Ames 9 5
Staphylococcus_aureus_subsp._aureus_MSHR1132 7 4
Staphylococcus_lugdunensis_N920143 6 4
Staphylococcus_aureus_CA-347 7 4
Staphylococcus_aureus_Bmb9393 7 4
Staphylococcus_aureus_M1 7 4
Staphylococcus_aureus_08BA02176 7 4
Staphylococcus_aureus_ST228/18412 7 4
Staphylococcus_aureus_ST228/18341 7 4
Staphylococcus_aureus_ST228/16125 7 4
Staphylococcus_aureus_ST228/16035 7 4
Staphylococcus_aureus_ST228/15532 7 4
Staphylococcus_aureus_ST228/10497 7 4
Staphylococcus_aureus_ST228/10388 7 4
Staphylococcus_aureus_04-02981 7 4
Staphylococcus_aureus_RF122 7 5
Staphylococcus_aureus_subsp._aureus_Z172 7 4
Staphylococcus_aureus_subsp._aureus_6850 7 4
Staphylococcus_aureus_subsp._aureus_SA957 7 4
Staphylococcus_aureus_subsp._aureus_CN1 7 4
Staphylococcus_aureus_subsp._aureus_SA40 7 4
Staphylococcus_aureus_subsp._aureus_11819-97 7 4
Staphylococcus_aureus_subsp._aureus_M013 7 4
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 5 3
Staphylococcus_aureus_subsp._aureus_VC40 7 4
Staphylococcus_aureus_subsp._aureus_T0131 7 4
Staphylococcus_aureus_subsp._aureus_LGA251 7 4
Staphylococcus_aureus_subsp._aureus_ECT-R_2 7 4
Staphylococcus_aureus_subsp._aureus_JKD6159 7 4
Staphylococcus_aureus_subsp._aureus_ED133 7 4
Staphylococcus_aureus_subsp._aureus_ED98 7 4
Staphylococcus_aureus_subsp._aureus_TW20 7 4
Staphylococcus_aureus_subsp._aureus_55/2053 7 4
Staphylococcus_aureus_subsp._aureus_TCH60 7 4
Staphylococcus_aureus_subsp._aureus_str._JKD6008 7 4
Staphylococcus_aureus_subsp._aureus_71193 7 4
Staphylococcus_aureus_subsp._aureus_S0385 7 4
Staphylococcus_aureus_subsp._aureus_str._Newman 7 4
Staphylococcus_aureus_subsp._aureus_Mu3 7 4
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 5 3
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 7 4
Staphylococcus_aureus_subsp._aureus_JH9 7 4
Staphylococcus_aureus_subsp._aureus_MSSA476 7 4
Staphylococcus_aureus_subsp._aureus_MRSA252 4 3
Staphylococcus_aureus_subsp._aureus_MW2 7 4
Staphylococcus_aureus_subsp._aureus_N315 7 4
Staphylococcus_aureus_subsp._aureus_Mu50 7 4
Staphylococcus_aureus_subsp._aureus_COL 7 4
Staphylococcus_aureus_subsp._aureus_NCTC_8325 7 4

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 9 8
NCBI_2017_08_genome 74238 42390
PDB_chains_(SCOP_1.75)_(PDB) 4 4
TargetDB__(Targets) 38 27
Protein_Data_Bank_(all_PDB_sequenc) 92 85
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 155 155
STRING_v9.0.5_(STRING) 369 205
Uniprot_2018_03_genome 6870 3853

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