SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain combinations for EspE N-terminal domain-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a EspE N-terminal domain-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Phytophthora_capsici_ 3 2
Leptolyngbya_sp._PCC_7376 9 7
Pseudanabaena_sp._PCC_7367 4 3
Acaryochloris_marina_MBIC11017 18 16
Synechocystis_sp._PCC_6803 6 4
Thermosynechococcus_sp._NK55 4 3
Thermosynechococcus_elongatus_BP-1 4 3
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 3 3
Synechococcus_sp._CC9311 1 1
Synechococcus_elongatus_PCC_7942 4 3
Microcoleus_sp._PCC_7113 4 3
Geitlerinema_sp._PCC_7407 3 3
Cyanothece_sp._PCC_8802 5 4
Gloeocapsa_sp._PCC_7428 5 4
Halothece_sp._PCC_7418 1 1
Microcystis_aeruginosa_NIES-843 1 1
Gloeobacter_violaceus_PCC_7421 4 4
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 2 2
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 2 2
Nostoc_punctiforme_PCC_73102 2 2
Nostoc_sp._PCC_7120 2 2
Nostoc_sp._PCC_7524 2 2
Anabaena_sp._90 1 1
Eggerthella_sp._YY7918 1 1
Eggerthella_lenta_DSM_2243 2 2
Rubrobacter_xylanophilus_DSM_9941 1 1
Ilumatobacter_coccineus 1 1
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Acidothermus_cellulolyticus_11B 5 5
Modestobacter_marinus 1 1
Kineococcus_radiotolerans_SRS30216 1 1
Amycolatopsis_mediterranei_U32 1 1
Nocardioides_sp._JS614 2 2
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 3 3
Actinoplanes_missouriensis_431 2 2
Sanguibacter_keddieii_DSM_10542 1 1
Jonesia_denitrificans_DSM_20603 1 1
Cellulomonas_flavigena_DSM_20109 1 1
Cellulomonas_fimi_ATCC_484 1 1
[Cellvibrio]_gilvus_ATCC_13127 1 1
Arthrobacter_chlorophenolicus_A6 2 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Dehalococcoides_ethenogenes_195 1 1
Dehalococcoides_sp._BAV1 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1 1
Anaerolinea_thermophila_UNI-1 1 1
Thermomicrobium_roseum_DSM_5159 2 2
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 2 2
Roseiflexus_sp._RS-1 5 4
Roseiflexus_castenholzii_DSM_13941 4 4
Chloroflexus_sp._MS-G 2 2
Chloroflexus_sp._Y-400-fl 1 1
Chloroflexus_aggregans_DSM_9485 2 1
Chloroflexus_aurantiacus_J-10-fl 1 1
Truepera_radiovictrix_DSM_17093 4 2
Deinococcus_gobiensis_I-0 5 2
Deinococcus_deserti_VCD115 3 1
Deinococcus_maricopensis_DSM_21211 3 1
Deinococcus_geothermalis_DSM_11300 7 3
Deinococcus_proteolyticus_MRP 6 4
Deinococcus_radiodurans_R1 3 1
Oceanithermus_profundus_DSM_14977 6 4
Marinithermus_hydrothermalis_DSM_14884 5 3
Meiothermus_silvanus_DSM_9946 5 3
Meiothermus_ruber_DSM_1279 5 3
Thermus_sp._CCB_US3_UF1 6 4
Thermus_scotoductus_SA-01 4 2
Thermus_thermophilus_HB27 5 3
Natranaerobius_thermophilus_JW/NM-WN-LF 2 2
Clostridium_clariflavum_DSM_19732 2 1
Eubacterium_siraeum 2 2
Clostridium_cellulolyticum_H10 2 2
Clostridium_thermocellum_ATCC_27405 3 2
Ethanoligenens_harbinense_YUAN-3 1 1
Ruminococcus_albus_7 2 2
Thermaerobacter_marianensis_DSM_12885 1 1
Sulfobacillus_acidophilus_DSM_10332 3 2
butyrate-producing_bacterium_SS3/4 1 1
Candidatus_Desulforudis_audaxviator_MP104C 3 3
Thermincola_potens_JR 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 2 2
Desulfosporosinus_orientis_DSM_765 3 2
Dehalobacter_sp._DCA 2 2
Dehalobacter_sp._CF 2 2
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 2 2
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_reducens_MI-1 2 2
Desulfotomaculum_acetoxidans_DSM_771 3 3
Desulfotomaculum_kuznetsovii_DSM_6115 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 5 4
Acetobacterium_woodii_DSM_1030 3 3
Eubacterium_eligens_ATCC_27750 2 2
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 2 2
Clostridium_sticklandii_DSM_519 1 1
Filifactor_alocis_ATCC_35896 1 1
Clostridium_lentocellum_DSM_5427 1 1
[Ruminococcus]_obeum 1 1
Eubacterium_rectale_M104/1 2 2
Eubacterium_rectale_ATCC_33656 2 2
Coprococcus_sp._ART55/1 1 1
Roseburia_hominis_A2-183 1 1
Roseburia_intestinalis 1 1
Butyrivibrio_proteoclasticus_B316 2 1
Butyrivibrio_fibrisolvens 2 1
Syntrophothermus_lipocalidus_DSM_12680 2 2
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Heliobacterium_modesticaldum_Ice1 3 2
Alkaliphilus_oremlandii_OhILAs 1 1
Alkaliphilus_metalliredigens_QYMF 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_novyi_NT 2 2
Clostridium_ljungdahlii_DSM_13528 1 1
Clostridium_kluyveri_DSM_555 2 2
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 2 2
Thermosediminibacter_oceani_DSM_16646 2 2
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Thermodesulfobium_narugense_DSM_14796 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Tepidanaerobacter_acetatoxydans_Re1 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Carboxydothermus_hydrogenoformans_Z-2901 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Ammonifex_degensii_KC4 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 1 1
Thermoanaerobacter_sp._X514 1 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 1 1
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 1 1
Acetohalobium_arabaticum_DSM_5501 1 1
Halothermothrix_orenii_H_168 3 3
Halanaerobium_hydrogeniformans 3 3
Halanaerobium_praevalens_DSM_2228 2 2
Streptococcus_sanguinis_SK36 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 1 1
Kyrpidia_tusciae_DSM_2912 2 2
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 2 1
Paenibacillus_mucilaginosus_3016 3 2
Paenibacillus_polymyxa_M1 2 1
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Anoxybacillus_flavithermus_WK1 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Geobacillus_sp._WCH70 1 1
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_pseudofirmus_OF4 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_coagulans_2-6 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Gemmatimonas_aurantiaca_T-27 2 2
Melioribacter_roseus_P3M 1 1
Ignavibacterium_album_JCM_16511 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 2 2
Solitalea_canadensis_DSM_3403 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Waddlia_chondrophila_WSU_86-1044 1 1
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 1 1
Simkania_negevensis_Z 1 1
Chlamydophila_pecorum_E58 1 1
Chlamydia_muridarum_Nigg 1 1
Chlamydophila_pneumoniae_TW-183 1 1
Chlamydophila_caviae_GPIC 1 1
Chlamydophila_felis_Fe/C-56 1 1
Chlamydophila_abortus_S26/3 1 1
Chlamydia_psittaci_01DC11 1 1
Chlamydia_trachomatis_B/Jali20/OT 1 1
Phycisphaera_mikurensis_NBRC_102666 6 6
Isosphaera_pallida_ATCC_43644 2 2
Planctomyces_brasiliensis_DSM_5305 5 5
Planctomyces_limnophilus_DSM_3776 6 6
Rhodopirellula_baltica_SH_1 6 6
Pirellula_staleyi_DSM_6068 5 5
Coraliomargarita_akajimensis_DSM_45221 5 5
Opitutus_terrae_PB90-1 6 6
Akkermansia_muciniphila_ATCC_BAA-835 2 2
Fretibacterium_fastidiosum 5 4
Thermovirga_lienii_DSM_17291 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 1 1
Turneriella_parva_DSM_21527 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Spirochaeta_smaragdinae_DSM_11293 2 2
Spirochaeta_caldaria_DSM_7334 2 2
Treponema_brennaborense_DSM_12168 1 1
Spirochaeta_africana_DSM_8902 2 2
Spirochaeta_thermophila_DSM_6192 2 2
Thermodesulfatator_indicus_DSM_15286 3 3
Thermodesulfobacterium_sp._OPB45 2 2
Desulfurispirillum_indicum_S5 3 3
Calditerrivibrio_nitroreducens_DSM_19672 5 5
Denitrovibrio_acetiphilus_DSM_12809 3 3
Deferribacter_desulfuricans_SSM1 7 7
Flexistipes_sinusarabici_DSM_4947 5 5
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 2 2
Thermotoga_thermarum_DSM_5069 2 2
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 2 2
Thermotoga_maritima_MSB8 1 1
Thermovibrio_ammonificans_HB-1 2 2
Desulfurobacterium_thermolithotrophum_DSM_11699 3 3
Sulfurihydrogenibium_sp._YO3AOP1 2 2
Sulfurihydrogenibium_azorense_Az-Fu1 1 1
Persephonella_marina_EX-H1 4 4
Hydrogenobaculum_sp._SN 2 2
Hydrogenobaculum_sp._HO 2 2
Hydrogenobaculum_sp._Y04AAS1 1 1
Thermocrinis_albus_DSM_14484 2 2
Aquifex_aeolicus_VF5 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Elusimicrobium_minutum_Pei191 1 1
Dictyoglomus_turgidum_DSM_6724 3 2
Dictyoglomus_thermophilum_H-6-12 3 2
Caldisericum_exile_AZM16c01 2 2
Candidatus_Chloracidobacterium_thermophilum_B 6 6
Candidatus_Solibacter_usitatus_Ellin6076 2 2
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 1 1
Candidatus_Koribacter_versatilis_Ellin345 2 2
Terriglobus_saanensis_SP1PR4 1 1
Terriglobus_roseus_DSM_18391 1 1
Acidobacterium_capsulatum_ATCC_51196 2 2
Thermodesulfovibrio_yellowstonii_DSM_11347 3 3
Candidatus_Nitrospira_defluvii 5 5
Leptospirillum_ferrooxidans_C2-3 1 1
Ilyobacter_polytropus_DSM_2926 2 2
Candidatus_Methylomirabilis_oxyfera 3 3
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 2 2
Candidatus_Saccharimonas_aalborgensis 2 2
Acidithiobacillus_ferrivorans_SS3 1 1
Acidithiobacillus_caldus_SM-1 4 4
Acidithiobacillus_ferrooxidans_ATCC_53993 1 1
Bacteriovorax_marinus_SJ 2 2
Bdellovibrio_bacteriovorus_HD100 3 3
Nautilia_profundicola_AmH 2 2
Nitratifractor_salsuginis_DSM_16511 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1
Sulfurospirillum_barnesii_SES-3 1 1
Campylobacter_hominis_ATCC_BAA-381 1 1
Campylobacter_lari_RM2100 1 1
Campylobacter_curvus_525.92 2 1
Campylobacter_concisus_13826 2 1
Campylobacter_sp._03-427 1 1
Campylobacter_fetus_subsp._fetus_82-40 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 2 2
Sulfuricurvum_kujiense_DSM_16994 2 2
Sulfurimonas_autotrophica_DSM_16294 4 4
Sulfurimonas_denitrificans_DSM_1251 1 1
Wolinella_succinogenes_DSM_1740 2 1
Nitratiruptor_sp._SB155-2 2 2
Sulfurovum_sp._NBC37-1 1 1
Desulfarculus_baarsii_DSM_2075 2 2
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophus_aciditrophicus_SB 6 6
Desulfomonile_tiedjei_DSM_6799 3 3
Syntrophobacter_fumaroxidans_MPOB 3 3
Desulfurivibrio_alkaliphilus_AHT2 10 8
Desulfotalea_psychrophila_LSv54 2 2
Desulfobulbus_propionicus_DSM_2032 7 7
Desulfatibacillum_alkenivorans_AK-01 12 12
Desulfobacterium_autotrophicum_HRM2 8 8
Desulfococcus_oleovorans_Hxd3 6 6
Desulfohalobium_retbaense_DSM_5692 5 5
Desulfomicrobium_baculatum_DSM_4028 7 6
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 4 4
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 2 2
Desulfovibrio_salexigens_DSM_2638 2 2
Desulfovibrio_africanus_str._Walvis_Bay 4 4
Hippea_maritima_DSM_10411 2 2
Geobacter_daltonii_FRC-32 15 15
Geobacter_sp._M21 15 15
Geobacter_uraniireducens_Rf4 12 12
Geobacter_lovleyi_SZ 17 14
Geobacter_bemidjiensis_Bem 15 15
Geobacter_sulfurreducens_KN400 13 11
Geobacter_metallireducens_GS-15 13 11
Pelobacter_propionicus_DSM_2379 18 14
Pelobacter_carbinolicus_DSM_2380 11 9
Babela_massiliensis 2 2
Haliangium_ochraceum_DSM_14365 11 11
Sorangium_cellulosum_'So_ce_56' 9 9
Anaeromyxobacter_sp._Fw109-5 12 12
Anaeromyxobacter_dehalogenans_2CP-1 16 16
Stigmatella_aurantiaca_DW4/3-1 26 25
Corallococcus_coralloides_DSM_2259 26 25
Myxococcus_xanthus_DK_1622 22 21
Myxococcus_fulvus_HW-1 25 23
Dechloromonas_aromatica_RCB 6 6
Thauera_sp._MZ1T 4 4
Azoarcus_sp._KH32C 5 5
Azoarcus_sp._BH72 6 6
Aromatoleum_aromaticum_EbN1 6 6
Dechlorosoma_suillum_PS 6 6
Pseudogulbenkiania_sp._NH8B 2 2
Laribacter_hongkongensis_HLHK9 3 2
Chromobacterium_violaceum_ATCC_12472 2 2
Neisseria_meningitidis_alpha14 1 1
Neisseria_meningitidis_FAM18 1 1
Neisseria_lactamica_020-06 1 1
Neisseria_gonorrhoeae_NCCP11945 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 6 6
Methylibium_petroleiphilum_PM1 9 8
Thiomonas_arsenitoxydans 4 4
Thiomonas_intermedia_K12 3 3
Rubrivivax_gelatinosus_IL144 6 6
Leptothrix_cholodnii_SP-6 10 9
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_eutropha_JMP134 2 2
Cupriavidus_taiwanensis_LMG_19424 2 2
Cupriavidus_metallidurans_CH34 2 2
Cupriavidus_necator_N-1 2 2
Ralstonia_eutropha_H16 2 2
Ralstonia_pickettii_12D 3 3
Ralstonia_solanacearum_CFBP2957 5 5
Burkholderia_sp._RPE64 2 2
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 2 2
Burkholderia_cenocepacia_HI2424 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 4 4
Burkholderia_gladioli_BSR3 2 2
Burkholderia_glumae_BGR1 1 1
Verminephrobacter_eiseniae_EF01-2 5 5
Alicycliphilus_denitrificans_K601 4 4
Ramlibacter_tataouinensis_TTB310 5 5
Delftia_sp._Cs1-4 5 5
Delftia_acidovorans_SPH-1 5 5
Polaromonas_sp._JS666 4 4
Polaromonas_naphthalenivorans_CJ2 4 4
Variovorax_paradoxus_S110 4 4
Rhodoferax_ferrireducens_T118 7 7
Acidovorax_ebreus_TPSY 4 4
Acidovorax_sp._KKS102 5 5
Acidovorax_sp._JS42 3 3
Acidovorax_citrulli_AAC00-1 4 4
Acidovorax_avenae_subsp._avenae_ATCC_19860 6 6
Comamonas_testosteroni_CNB-2 4 4
Herminiimonas_arsenicoxydans 4 4
Collimonas_fungivorans_Ter331 4 4
Janthinobacterium_sp._Marseille 4 4
Herbaspirillum_seropedicae_SmR1 1 1
Pusillimonas_sp._T7-7 1 1
Bordetella_petrii_DSM_12804 1 1
Bordetella_avium_197N 2 2
Bordetella_bronchiseptica_RB50 1 1
Achromobacter_xylosoxidans_A8 2 2
Achromobacter_xylosoxidans 3 3
Thiobacillus_denitrificans_ATCC_25259 6 6
Nitrosospira_multiformis_ATCC_25196 4 4
Nitrosomonas_sp._Is79A3 3 3
Nitrosomonas_eutropha_C91 2 2
Nitrosomonas_europaea_ATCC_19718 3 3
Sideroxydans_lithotrophicus_ES-1 7 7
Gallionella_capsiferriformans_ES-2 6 5
Methylotenera_versatilis_301 9 9
Methylotenera_mobilis_JLW8 6 6
Methylovorus_sp._MP688 9 8
Methylovorus_glucosetrophus_SIP3-4 9 8
Methylobacillus_flagellatus_KT 6 6
Magnetococcus_marinus_MC-1 1 1
Parvularcula_bermudensis_HTCC2503 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 1 1
Caulobacter_crescentus_NA1000 1 1
Phenylobacterium_zucineum_HLK1 1 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_aromaticivorans_DSM_12444 1 1
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 2 2
Sphingobium_chlorophenolicum_L-1 2 2
Sphingomonas_sp._MM-1 1 1
Sphingomonas_wittichii_RW1 1 1
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 2 2
Hirschia_baltica_ATCC_49814 1 1
Hyphomonas_neptunium_ATCC_15444 2 2
Dinoroseobacter_shibae_DFL_12 1 1
Phaeobacter_gallaeciensis_2.10 1 1
Jannaschia_sp._CCS1 1 1
Ruegeria_pomeroyi_DSS-3 1 1
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 1 1
Rhodobacter_sphaeroides_ATCC_17029 1 1
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 1 1
Rhodospirillum_photometricum_DSM_122 1 1
Tistrella_mobilis_KA081020-065 1 1
Rhodospirillum_rubrum_F11 2 2
Azospirillum_sp._B510 1 1
Granulibacter_bethesdensis_CGDNIH1 1 1
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Acidiphilium_multivorum_AIU301 2 2
Acidiphilium_cryptum_JF-5 2 2
Micavibrio_aeruginosavorus_ARL-13 2 2
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
alpha_proteobacterium_HIMB5 1 1
Candidatus_Pelagibacter_sp._IMCC9063 1 1
Starkeya_novella_DSM_506 1 1
Xanthobacter_autotrophicus_Py2 4 3
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_extorquens_AM1 4 4
Methylobacterium_sp._4-46 2 2
Methylobacterium_nodulans_ORS_2060 1 1
Parvibaculum_lavamentivorans_DS-1 1 1
Sinorhizobium_fredii_NGR234 1 1
Agrobacterium_radiobacter_K84 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Mesorhizobium_loti_MAFF303099 1 1
Methylocella_silvestris_BL2 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Oligotropha_carboxidovorans_OM4 1 1
Rhodopseudomonas_palustris_BisA53 1 1
Nitrobacter_winogradskyi_Nb-255 1 1
Nitrobacter_hamburgensis_X14 2 2
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 2 2
Methylocystis_sp._SC2 1 1
Saccharophagus_degradans_2-40 5 5
Teredinibacter_turnerae_T7901 5 5
Cellvibrio_japonicus_Ueda107 8 8
Aggregatibacter_aphrophilus_NJ8700 1 1
Aggregatibacter_actinomycetemcomitans_D7S-1 1 1
Gallibacterium_anatis_UMN179 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Haemophilus_parasuis_SH0165 1 1
Haemophilus_ducreyi_35000HP 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Haemophilus_influenzae_PittEE 1 1
Actinobacillus_succinogenes_130Z 1 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Oceanimonas_sp._GK1 3 3
Tolumonas_auensis_DSM_9187 2 2
Aeromonas_veronii_B565 3 3
Aeromonas_salmonicida_subsp._salmonicida_A449 3 3
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 3 3
Aliivibrio_salmonicida_LFI1238 2 2
Vibrio_fischeri_MJ11 3 3
Vibrio_sp._Ex25 3 3
Vibrio_harveyi_ATCC_BAA-1116 3 3
Vibrio_parahaemolyticus_RIMD_2210633 3 3
Vibrio_splendidus_LGP32 3 3
Vibrio_anguillarum_775 3 3
Vibrio_furnissii_NCTC_11218 3 3
Vibrio_vulnificus_MO6-24/O 3 3
Vibrio_cholerae_O395 3 3
Photobacterium_profundum_SS9 3 3
Psychromonas_ingrahamii_37 2 2
Psychromonas_sp._CNPT3 2 2
Idiomarina_loihiensis_L2TR 2 2
Ferrimonas_balearica_DSM_9799 3 3
Shewanella_piezotolerans_WP3 3 3
Shewanella_loihica_PV-4 3 3
Shewanella_halifaxensis_HAW-EB4 3 3
Shewanella_sediminis_HAW-EB3 4 4
Shewanella_denitrificans_OS217 3 3
Shewanella_pealeana_ATCC_700345 3 3
Shewanella_oneidensis_MR-1 3 3
Shewanella_baltica_OS185 4 4
Shewanella_woodyi_ATCC_51908 3 3
Shewanella_sp._MR-4 3 3
Shewanella_amazonensis_SB2B 3 3
Shewanella_violacea_DSS12 3 3
Shewanella_frigidimarina_NCIMB_400 3 3
Shewanella_putrefaciens_CN-32 3 3
Colwellia_psychrerythraea_34H 3 3
Pseudoalteromonas_sp._SM9913 2 2
Pseudoalteromonas_atlantica_T6c 4 4
Pseudoalteromonas_haloplanktis_TAC125 3 3
Glaciecola_sp._4H-3-7+YE-5 3 3
Glaciecola_nitratireducens_FR1064 4 4
Marinobacter_adhaerens_HP15 6 6
Marinobacter_sp._BSs20148 2 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 6 6
Marinobacter_aquaeolei_VT8 8 8
Alteromonas_sp._SN2 3 3
Alteromonas_macleodii_str._'Deep_ecotype' 3 3
Kangiella_koreensis_DSM_16069 4 4
Hahella_chejuensis_KCTC_2396 9 9
Alcanivorax_borkumensis_SK2 3 3
Marinomonas_mediterranea_MMB-1 3 2
Chromohalobacter_salexigens_DSM_3043 1 1
Halomonas_elongata_DSM_2581 3 3
Methylomicrobium_alcaliphilum 5 5
Methylomonas_methanica_MC09 8 7
Methylococcus_capsulatus_str._Bath 3 3
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 3 3
Frateuria_aurantia_DSM_6220 3 3
Pseudoxanthomonas_spadix_BD-a59 3 3
Pseudoxanthomonas_suwonensis_11-1 4 3
Stenotrophomonas_maltophilia_K279a 6 5
Xylella_fastidiosa_M23 2 2
Xanthomonas_axonopodis_pv._citri_str._306 5 5
Xanthomonas_albilineans_GPE_PC73 3 3
Xanthomonas_oryzae_pv._oryzae_PXO99A 3 3
Xanthomonas_campestris_pv._campestris_str._B100 5 5
Halothiobacillus_neapolitanus_c2 2 2
Spiribacter_sp._UAH-SP71 2 2
Alkalilimnicola_ehrlichii_MLHE-1 3 3
Thioalkalivibrio_sulfidophilus_HL-EbGr7 3 3
Thioalkalivibrio_sp._K90mix 3 3
Halorhodospira_halophila_SL1 2 2
Allochromatium_vinosum_DSM_180 4 3
Thiocystis_violascens_DSM_198 4 4
Nitrosococcus_watsonii_C-113 3 3
Nitrosococcus_halophilus_Nc4 2 2
Nitrosococcus_oceani_ATCC_19707 2 2
Coxiella_burnetii_Dugway_5J108-111 1 1
Legionella_longbeachae_NSW150 2 2
Legionella_pneumophila_str._Corby 2 2
gamma_proteobacterium_HdN1 4 4
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 3 3
Serratia_sp._ATCC_39006 1 1
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 1 1
Dickeya_zeae_Ech1591 2 2
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 1 1
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 1 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_dysenteriae_Sd197 2 2
Salmonella_bongori_NCTC_12419 1 1
Klebsiella_oxytoca_E718 2 2
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Escherichia_fergusonii_ATCC_35469 2 2
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1
Azotobacter_vinelandii_DJ 3 3
Pseudomonas_sp._TKP 4 4
Pseudomonas_sp._UW4 2 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 5 4
Pseudomonas_entomophila_L48 4 4
Pseudomonas_syringae_pv._tomato_str._DC3000 5 4
Pseudomonas_stutzeri_A1501 3 3
Pseudomonas_fulva_12-X 3 3
Pseudomonas_putida_F1 3 3
Pseudomonas_protegens_Pf-5 2 2
Pseudomonas_fluorescens_SBW25 4 4
Pseudomonas_mendocina_ymp 6 6
Pseudomonas_aeruginosa_UCBPP-PA14 6 6
Pseudomonas_sp._VLB120 4 4
Psychrobacter_sp._G 3 3
Psychrobacter_arcticus_273-4 2 2
Psychrobacter_cryohalolentis_K5 3 3
Moraxella_catarrhalis_RH4 1 1
Acinetobacter_oleivorans_DR1 3 3
Acinetobacter_calcoaceticus_PHEA-2 3 3
Acinetobacter_baumannii_ATCC_17978 1 1
Acinetobacter_sp._ADP1 3 3
Methylophaga_sp._JAM1 3 3
Cycloclasticus_sp._P1 1 1
Thiomicrospira_crunogena_XCL-2 2 2
Thioalkalimicrobium_cyclicum_ALM1 2 2
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1
Methanospirillum_hungatei_JF-1 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   1 1
Chroococcidiopsis_thermalis_PCC_7203 4 3
Chamaesiphon_minutus_PCC_6605 1 1
Synechocystis_sp._PCC_6803_substr._PCC-P 6 4
Synechocystis_sp._PCC_6803_substr._PCC-N 5 3
Synechocystis_sp._PCC_6803_substr._GT-I 6 4
Synechocystis_sp._PCC_6803 6 4
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._JA-2-3B'a(2-13) 8 6
Synechococcus_sp._JA-3-3Ab 7 6
Synechococcus_sp._PCC_7002 3 3
Synechococcus_elongatus_PCC_6301 3 3
Crinalium_epipsammum_PCC_9333 3 3
Oscillatoria_nigro-viridis_PCC_7112 1 1
Oscillatoria_acuminata_PCC_6304 4 3
Arthrospira_platensis_NIES-39 5 4
Cyanothece_sp._PCC_7822 4 4
Cyanothece_sp._PCC_7425 6 6
Cyanothece_sp._PCC_7424 4 4
Cyanothece_sp._ATCC_51142 4 4
Cyanothece_sp._PCC_8801 5 4
Cyanobacterium_aponinum_PCC_10605 2 2
Cyanobacterium_stanieri_PCC_7202 2 2
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 4 4
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 6 5
Stanieria_cyanosphaera_PCC_7437 3 3
Calothrix_parietina_Calothrix_sp._PCC_6303 4 4
Cylindrospermum_stagnale_PCC_7417 2 2
Anabaena_cylindrica_PCC_7122 2 2
Gordonibacter_pamelaeae_7-10-1-b 1 1
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Actinoplanes_friuliensis_DSM_7358 3 3
Bifidobacterium_thermophilum_RBL67 1 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Chthonomonas_calidirosea_T49 3 3
Deinococcus_peraridilitoris_DSM_19664 5 2
Thermus_oshimai_JL-2 4 2
Thermus_thermophilus_JL-18 5 3
Thermus_thermophilus_SG0.5JP17-16 4 2
Thermus_thermophilus_HB8 5 3
Eubacterium_siraeum_V10Sc8a 2 2
Clostridium_thermocellum_DSM_1313 3 2
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 2 1
Ruminococcus_champanellensis_18P13 1 1
Sulfobacillus_acidophilus_TPY 3 2
Clostridium_acidurici_9a 2 2
Desulfosporosinus_meridiei_DSM_13257 2 2
Desulfitobacterium_dichloroeliminans_LMG_P-21439 2 2
Desulfitobacterium_hafniense_DCB-2 2 2
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_difficile_BI1 2 2
Clostridium_difficile_R20291 2 2
Clostridium_difficile_CD196 2 2
Coprococcus_catus_GD/7 1 1
Roseburia_intestinalis_XB6B4 1 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_autoethanogenum_DSM_10061 2 2
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 2 2
Clostridium_tetani_genome_12124569 1 1
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 1 1
Clostridium_pasteurianum_BC1 2 2
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_BKT015925 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermacetogenium_phaeum_DSM_12270 1 1
Thermoanaerobacter_sp._X513 1 1
Halobacteroides_halobius_DSM_5150 1 1
Enterococcus_casseliflavus_EC20 1 1
Exiguobacterium_antarcticum_B7 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 2 2
Thermobacillus_composti_KWC4 1 1
Paenibacillus_mucilaginosus_KNP414 3 2
Paenibacillus_mucilaginosus_K02 3 2
Paenibacillus_polymyxa_CR1 2 1
Paenibacillus_polymyxa_SC2 2 1
Paenibacillus_polymyxa_E681 2 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Amphibacillus_xylanus_NBRC_15112 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_coagulans_36D1 1 1
Salinibacter_ruber_DSM_13855 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 1 1
Chlamydia_pecorum_P787 1 1
Chlamydia_pecorum_W73 1 1
Chlamydia_pecorum_PV3056/3 1 1
Chlamydophila_pneumoniae_LPCoLN 1 1
Chlamydophila_pneumoniae_J138 1 1
Chlamydophila_pneumoniae_CWL029 1 1
Chlamydophila_pneumoniae_AR39 1 1
Chlamydia_psittaci_01DC12 1 1
Chlamydia_psittaci_WC 1 1
Chlamydia_psittaci_M56 1 1
Chlamydia_psittaci_WS/RT/E30 1 1
Chlamydia_psittaci_VS225 1 1
Chlamydia_psittaci_MN 1 1
Chlamydia_psittaci_GR9 1 1
Chlamydia_psittaci_84/55 1 1
Chlamydia_psittaci_08DC60 1 1
Chlamydia_psittaci_02DC15 1 1
Chlamydia_psittaci_C19/98 1 1
Chlamydia_psittaci_NJ1 1 1
Chlamydia_psittaci_CP3 1 1
Chlamydophila_psittaci_RD1 1 1
Chlamydia_psittaci_Mat116 1 1
Chlamydophila_psittaci_6BC 1 1
Chlamydophila_psittaci_6BC 1 1
Chlamydia_trachomatis_C/TW-3 1 1
Chlamydia_trachomatis_L2/434/Bu(f) 1 1
Chlamydia_trachomatis_L2/434/Bu(i) 1 1
Chlamydia_trachomatis_IU888 1 1
Chlamydia_trachomatis_IU824 1 1
Chlamydia_trachomatis_L2b/Canada2 1 1
Chlamydia_trachomatis_L2b/Canada1 1 1
Chlamydia_trachomatis_L3/404/LN 1 1
Chlamydia_trachomatis_L2b/Ams5 1 1
Chlamydia_trachomatis_L2b/Ams4 1 1
Chlamydia_trachomatis_L2b/Ams3 1 1
Chlamydia_trachomatis_L2b/Ams2 1 1
Chlamydia_trachomatis_L2b/Ams1 1 1
Chlamydia_trachomatis_L2b/795 1 1
Chlamydia_trachomatis_L2b/CV204 1 1
Chlamydia_trachomatis_L2b/LST 1 1
Chlamydia_trachomatis_L2b/UCH-2 1 1
Chlamydia_trachomatis_L2b/8200/07 1 1
Chlamydia_trachomatis_L2/25667R 1 1
Chlamydia_trachomatis_L1/224 1 1
Chlamydia_trachomatis_L1/115 1 1
Chlamydia_trachomatis_L1/440/LN 1 1
Chlamydia_trachomatis_K/SotonK1 1 1
Chlamydia_trachomatis_Ia/SotonIa3 1 1
Chlamydia_trachomatis_Ia/SotonIa1 1 1
Chlamydia_trachomatis_G/SotonG1 1 1
Chlamydia_trachomatis_F/SotonF3 1 1
Chlamydia_trachomatis_F/SW5 1 1
Chlamydia_trachomatis_F/SW4 1 1
Chlamydia_trachomatis_E/SotonE8 1 1
Chlamydia_trachomatis_E/SotonE4 1 1
Chlamydia_trachomatis_E/SW3 1 1
Chlamydia_trachomatis_D/SotonD6 1 1
Chlamydia_trachomatis_D/SotonD5 1 1
Chlamydia_trachomatis_D/SotonD1 1 1
Chlamydia_trachomatis_A/5291 1 1
Chlamydia_trachomatis_A/363 1 1
Chlamydia_trachomatis_RC-J/971 1 1
Chlamydia_trachomatis_RC-L2/55 1 1
Chlamydia_trachomatis_J/6276tet1 1 1
Chlamydia_trachomatis_RC-J/966 1 1
Chlamydia_trachomatis_RC-J(s)/122 1 1
Chlamydia_trachomatis_RC-F(s)/342 1 1
Chlamydia_trachomatis_RC-L2(s)/3 1 1
Chlamydia_trachomatis_RC-J/953 1 1
Chlamydia_trachomatis_RC-J943 1 1
Chlamydia_trachomatis_RC-Fs852 1 1
Chlamydia_trachomatis_RC-L2s46 1 1
Chlamydia_trachomatis_RC-F69 1 1
Chlamydia_trachomatis_L2c 1 1
Chlamydia_trachomatis_D-LC 1 1
Chlamydia_trachomatis_D-EC 1 1
Chlamydia_trachomatis_G/9301 1 1
Chlamydia_trachomatis_G/11074 1 1
Chlamydia_trachomatis_G/11222 1 1
Chlamydia_trachomatis_G/9768 1 1
Chlamydia_trachomatis_E/150 1 1
Chlamydia_trachomatis_E/11023 1 1
Chlamydia_trachomatis_B/TZ1A828/OT 1 1
Chlamydia_trachomatis_Sweden2 1 1
Chlamydia_trachomatis_E/Bour 1 1
Chlamydia_trachomatis_A2497 1 1
Chlamydia_trachomatis_A2497 1 1
Chlamydia_trachomatis_L2b/UCH-1/proctitis 1 1
Chlamydia_trachomatis_434/Bu 1 1
Chlamydia_trachomatis_A/HAR-13 1 1
Chlamydia_trachomatis_D/UW-3/CX 1 1
Singulisphaera_acidiphila_DSM_18658 3 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Spirochaeta_thermophila_DSM_6578 2 2
Thermotoga_maritima_MSB8 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Acidithiobacillus_ferrooxidans_ATCC_23270 1 1
Bdellovibrio_exovorus_JSS 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 3 3
Campylobacter_coli_76339 1 1
Campylobacter_coli_15-537360 1 1
Campylobacter_coli_CVM_N29710 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 9 9
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 10 6
Desulfovibrio_vulgaris_RCH1 2 2
Desulfovibrio_vulgaris_str._'Miyazaki_F' 2 2
Desulfovibrio_vulgaris_str._Hildenborough 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 10 9
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 23 20
Geobacter_sulfurreducens_PCA 13 11
Sorangium_cellulosum_So0157-2 9 9
Anaeromyxobacter_sp._K 15 15
Anaeromyxobacter_dehalogenans_2CP-C 15 15
Myxococcus_stipitatus_DSM_14675 25 24
Neisseria_meningitidis_WUE_2594 1 1
Neisseria_meningitidis_G2136 1 1
Neisseria_meningitidis_M04-240196 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_M01-240355 1 1
Neisseria_meningitidis_8013 1 1
Neisseria_meningitidis_053442 1 1
Neisseria_meningitidis_Z2491 1 1
Neisseria_meningitidis_H44/76 1 1
Neisseria_meningitidis_alpha710 1 1
Neisseria_meningitidis_MC58 1 1
Neisseria_gonorrhoeae_TCDC-NG08107 1 1
Neisseria_gonorrhoeae_FA_1090 1 1
Burkholderia_phenoliruptrix_BR3459a 2 2
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_pickettii_12J 3 3
Ralstonia_solanacearum_FQY_4 4 4
Ralstonia_solanacearum_Po82 4 4
Ralstonia_solanacearum_PSI07 4 4
Ralstonia_solanacearum_CMR15 3 3
Ralstonia_solanacearum_GMI1000 5 5
Burkholderia_sp._YI23 3 3
Burkholderia_sp._CCGE1003 2 2
Burkholderia_sp._CCGE1001 2 2
Burkholderia_sp._KJ006 3 3
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 2 2
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 1 1
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 3 3
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 8 7
Alicycliphilus_denitrificans_BC 4 4
Variovorax_paradoxus_B4 4 4
Variovorax_paradoxus_EPS 4 4
Bordetella_parapertussis_Bpp5 1 1
Bordetella_bronchiseptica_MO149 1 1
Bordetella_bronchiseptica_253 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 3 3
Nitrosomonas_sp._AL212 3 3
Sulfuricella_denitrificans_skB26 8 8
Caulobacter_crescentus_CB15 1 1
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Octadecabacter_antarcticus_307 1 1
Rhodobacter_sphaeroides_KD131 1 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Rhodobacter_sphaeroides_2.4.1 1 1
Paracoccus_aminophilus_JCM_7686 1 1
Rhodospirillum_rubrum_ATCC_11170 2 2
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Micavibrio_aeruginosavorus_EPB 2 2
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Sinorhizobium_fredii_HH103 1 1
Oligotropha_carboxidovorans_OM5 1 1
Oligotropha_carboxidovorans_OM5 1 1
Rhodopseudomonas_palustris_TIE-1 1 1
Rhodopseudomonas_palustris_HaA2 2 2
Rhodopseudomonas_palustris_BisB5 1 1
Rhodopseudomonas_palustris_BisB18 2 2
Rhodopseudomonas_palustris_CGA009 1 1
Bradyrhizobium_sp._BTAi1 2 2
Bradyrhizobium_oligotrophicum_S58 4 4
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 8 7
Mannheimia_succiniciproducens_MBEL55E 1 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 1 1
Aggregatibacter_actinomycetemcomitans_D11S-1 1 1
Mannheimia_haemolytica_USMARC_2286 1 1
Mannheimia_haemolytica_M42548 1 1
Mannheimia_haemolytica_D174 1 1
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-183 1 1
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Pasteurella_multocida_36950 1 1
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Haemophilus_influenzae_KR494 1 1
Haemophilus_influenzae_F3047 1 1
Haemophilus_influenzae_F3031 1 1
Haemophilus_influenzae_10810 1 1
Haemophilus_influenzae_PittGG 1 1
Haemophilus_influenzae_86-028NP 1 1
Haemophilus_influenzae_R2866 1 1
Haemophilus_influenzae_R2846 1 1
Haemophilus_influenzae_Rd_KW20 1 1
Actinobacillus_suis_H91-0380 1 1
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 3 3
Vibrio_fischeri_ES114 3 3
Vibrio_sp._EJY3 3 3
Vibrio_parahaemolyticus_BB22OP 3 3
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 3 3
Vibrio_anguillarum_Listonella_anguillarum_M3 2 2
Vibrio_nigripulchritudo_VibrioScope 3 3
Vibrio_vulnificus_CMCP6 3 3
Vibrio_vulnificus_YJ016 3 3
Vibrio_cholerae_LMA3984-4 2 2
Vibrio_cholerae_M66-2 3 3
Vibrio_cholerae_O395 3 3
Vibrio_cholerae_IEC224 3 3
Vibrio_cholerae_O1_str._2010EL-1786 3 3
Vibrio_cholerae_MJ-1236 3 3
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 3 3
Idiomarina_loihiensis_GSL_199 2 2
Shewanella_sp._W3-18-1 3 3
Shewanella_sp._ANA-3 3 3
Shewanella_baltica_BA175 3 3
Shewanella_baltica_OS678 4 4
Shewanella_baltica_OS117 3 3
Shewanella_baltica_OS223 3 3
Shewanella_baltica_OS195 4 4
Shewanella_baltica_OS155 3 3
Shewanella_sp._MR-7 3 3
Shewanella_putrefaciens_200 3 3
Glaciecola_psychrophila_170 3 3
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U8' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U7' 3 3
Alteromonas_macleodii_str._'Ionian_Sea_U4' 3 3
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 3 3
Alteromonas_macleodii_str._'English_Channel_615' 3 3
Alteromonas_macleodii_AltDE1 3 3
Alteromonas_macleodii_str._'English_Channel_673' 3 3
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 3 3
Alteromonas_macleodii_str._'Black_Sea_11' 2 2
Alteromonas_macleodii_ATCC_27126 3 3
Alcanivorax_dieselolei_B5 3 3
Thalassolituus_oleivorans_MIL-1 5 5
Stenotrophomonas_maltophilia_D457 6 5
Stenotrophomonas_maltophilia_JV3 6 5
Stenotrophomonas_maltophilia_R551-3 6 5
Xylella_fastidiosa_subsp._fastidiosa_GB514 2 2
Xylella_fastidiosa_M12 2 2
Xylella_fastidiosa_Temecula1 2 2
Xylella_fastidiosa_9a5c 2 2
Xanthomonas_citri_subsp._citri_Aw12879 5 5
Xanthomonas_campestris_pv._vesicatoria_str._85-10 5 5
Xanthomonas_axonopodis_pv._citrumelo_F1 5 5
Xanthomonas_axonopodis_Xac29-1 5 5
Xanthomonas_oryzae_pv._oryzicola_BLS256 4 4
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 3 3
Xanthomonas_oryzae_pv._oryzae_KACC_10331 3 3
Xanthomonas_campestris_pv._raphani_756C 5 5
Xanthomonas_campestris_pv._campestris_str._8004 5 5
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 5 5
Spiribacter_salinus_M19-40 1 1
Thioalkalivibrio_nitratireducens_DSM_14787 3 3
Thioflavicoccus_mobilis_8321 3 3
Coxiella_burnetii_CbuK_Q154 1 1
Coxiella_burnetii_CbuG_Q212 1 1
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 1 1
Legionella_pneumophila_str._Paris 2 2
Legionella_pneumophila_str._Lens 2 2
Legionella_pneumophila_subsp._pneumophila_LPE509 2 2
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 2 2
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila 2 2
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 2
Legionella_pneumophila_2300/99_Alcoy 2 2
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 2 2
Yersinia_enterocolitica_subsp._palearctica_Y11 2 2
Serratia_plymuthica_S13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Dickeya_dadantii_Ech586 1 1
Dickeya_dadantii_3937 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Raoultella_ornithinolytica_B6 1 1
Shigella_sonnei_53G 2 1
Shigella_flexneri_2002017 1 1
Shigella_flexneri_2a_str._301 1 1
Shigella_dysenteriae_1617 2 2
Shigella_boydii_Sb227 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Klebsiella_oxytoca_KCTC_1686 2 2
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 2 2
Escherichia_coli_JJ1886 2 2
Escherichia_coli_LY180 2 2
Escherichia_coli_APEC_O78 2 2
Escherichia_coli_O7:K1_str._CE10 2 2
Escherichia_coli_O104:H4_str._2009EL-2050 2 2
Escherichia_coli_O104:H4_str._2009EL-2071 2 2
Escherichia_coli_O104:H4_str._2011C-3493 2 2
Escherichia_coli_NA114 2 2
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 2 2
Escherichia_coli_str._'clone_D_i14' 2 2
Escherichia_coli_UM146 2 2
Escherichia_coli_042 2 2
Escherichia_coli_Xuzhou21 2 2
Escherichia_coli_IHE3034 2 2
Escherichia_coli_UMNK88 2 2
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 2 2
Escherichia_coli_KO11FL 2 2
Escherichia_coli_KO11FL 2 2
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 2 2
Escherichia_coli_55989 2 2
Escherichia_coli_S88 2 2
Escherichia_coli_IAI1 2 2
Escherichia_coli_W 2 2
Escherichia_coli_W 2 2
Escherichia_coli_DH1 1 1
Escherichia_coli_DH1 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 2 2
Escherichia_coli_SE11 2 2
Escherichia_coli_APEC_O1 2 2
Escherichia_coli_O103:H2_str._12009 2 2
Escherichia_coli_UTI89 2 2
Escherichia_coli_536 2 2
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 2 2
Escherichia_coli_O55:H7_str._RM12579 3 3
Escherichia_coli_O55:H7_str._CB9615 3 3
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 2 2
Escherichia_coli_O127:H6_str._E2348/69 2 2
Escherichia_coli_O157:H7_str._TW14359 2 2
Escherichia_coli_O157:H7_str._EC4115 2 2
Escherichia_coli_O157:H7_str._Sakai 2 2
Escherichia_coli_O157:H7_str._EDL933 2 2
Escherichia_coli_str._K-12_substr._MDS42 1 1
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 1 1
Escherichia_coli_str._K-12_substr._W3110 1 1
Escherichia_coli_str._K-12_substr._DH10B 2 2
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 2 2
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Azotobacter_vinelandii_CA6 3 3
Azotobacter_vinelandii_CA 3 3
Pseudomonas_denitrificans_ATCC_13867 4 4
Pseudomonas_syringae_pv._phaseolicola_1448A 6 5
Pseudomonas_syringae_pv._syringae_B728a 5 4
Pseudomonas_stutzeri_CCUG_29243 4 4
Pseudomonas_stutzeri_DSM_10701 4 4
Pseudomonas_stutzeri_DSM_4166 4 4
Pseudomonas_stutzeri_RCH2 5 5
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 3 3
Pseudomonas_monteilii_SB3101 3 3
Pseudomonas_monteilii_SB3078 3 3
Pseudomonas_putida_H8234 5 5
Pseudomonas_putida_HB3267 4 4
Pseudomonas_putida_NBRC_14164 4 4
Pseudomonas_putida_DOT-T1E 3 3
Pseudomonas_putida_S16 4 4
Pseudomonas_putida_BIRD-1 4 4
Pseudomonas_putida_W619 5 5
Pseudomonas_putida_ND6 4 4
Pseudomonas_putida_KT2440 4 4
Pseudomonas_putida_GB-1 4 4
Pseudomonas_protegens_CHA0 2 2
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 6 5
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 3 3
Pseudomonas_fluorescens_Pf0-1 4 4
Pseudomonas_resinovorans_NBRC_106553 5 5
Pseudomonas_mendocina_NK-01 4 4
Pseudomonas_aeruginosa_SCV20265 6 6
Pseudomonas_aeruginosa_MTB-1 6 6
Pseudomonas_aeruginosa_LES431 6 6
Pseudomonas_aeruginosa_RP73 6 6
Pseudomonas_aeruginosa_B136-33 6 6
Pseudomonas_aeruginosa_PA1R 6 6
Pseudomonas_aeruginosa_PA1 6 6
Pseudomonas_aeruginosa_DK2 6 6
Pseudomonas_aeruginosa_NCGM2.S1 6 6
Pseudomonas_aeruginosa_M18 6 6
Pseudomonas_aeruginosa_LESB58 6 6
Pseudomonas_aeruginosa_PA7 6 6
Pseudomonas_aeruginosa_PAO1 6 6
Acinetobacter_genomosp._13TU__RUH2624 3 3
Acinetobacter_sp.__SH024 3 3
Acinetobacter_calcoaceticus_ruh2202 3 3
Acinetobacter_baumannii_ZW85-1 3 3
Acinetobacter_baumannii_TYTH-1 3 3
Acinetobacter_baumannii_BJAB0868 3 3
Acinetobacter_baumannii_BJAB0715 3 3
Acinetobacter_baumannii_BJAB07104 3 3
Acinetobacter_baumannii_TCDC-AB0715 3 3
Acinetobacter_baumannii_D1279779 3 3
Acinetobacter_baumannii_MDR-TJ 3 3
Acinetobacter_baumannii_1656-2 3 3
Acinetobacter_baumannii__ATCC_19606 3 3
Acinetobacter_baumannii_AB307-0294 3 3
Acinetobacter_baumannii_AYE 3 3
Acinetobacter_baumannii_SDF 2 2
Acinetobacter_baumannii_MDR-ZJ06 3 3
Acinetobacter_baumannii_AB0057 3 3
Acinetobacter_baumannii_ACICU 3 3
Acinetobacter_radioresistens__SH164 3 3
Acinetobacter_junii__SH205 3 3
Acinetobacter_johnsonii__SH046 3 3
Acinetobacter_lwoffii__SH145 3 3
Methylophaga_sp._JAM7 2 2
Cycloclasticus_zancles_7-ME 2 2
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Ricinus_communis__(Early_assembly)   (Castor bean)   3 3
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 2 2
NCBI_plasmid_sequences_(Plasmids) 66 65
NCBI_viral_sequences_(Viral) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 93 57
PDB_chains_(SCOP_1.75)_(PDB) 3 3
STRING_v9.0.5_(STRING) 1348 1291
Uniprot_2018_03_genome 30732 29773
NCBI_2017_08_genome 83529 81793
TargetDB__(Targets) 30 27
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 23 23

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]