SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for BLRF2-like superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a BLRF2-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Sclerotinia_sclerotiorum_ 1 1
Aspergillus_zonatus_v1.0 1 1
Anabaena_variabilis_ATCC_29413 1 1
Streptococcus_infantarius_subsp._infantarius_CJ18 1 1
Bacillus_clausii_KSM-K16 1 1
Candidatus_Solibacter_usitatus_Ellin6076 1 1
Sulfurovum_sp._NBC37-1 1 1
Pseudomonas_sp._VLB120 1 1

Strains
Genome     Number   Proteins
Streptococcus_lutetiensis_033 1 1
Streptococcus_pneumoniae_70585 1 1
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 1 1

Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 1 1
Protein_Data_Bank_(all_PDB_sequenc) 6 6
STRING_v9.0.5_(STRING) 7 7
TargetDB__(Targets) 8 8
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 12 12
NCBI_viral_sequences_(Viral) 20 20
UniProt__viral_sequences_(Viral) 35 35
PDB_chains_(SCOP_1.75)_(PDB) 1 1
Uniprot_2018_03_genome 231 231
NCBI_2017_08_genome 757 757

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