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Domain combinations for SMI1/KNR4-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a SMI1/KNR4-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   17 17
Pan_troglodytes_76_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_76_3.1   (Western gorilla)   3 3
Pongo_abelii_76_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   2 2
Papio_anubis_76   (Olive baboon)   3 3
Macaca_mulatta_76_1   (Rhesus monkey)   4 4
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   6 6
Otolemur_garnettii_76_3   (Small-eared galago)   2 2
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   2 2
Mus_musculus_76_38   (House mouse)   6 6
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   2 2
Cavia_porcellus_76_3   (Domestic guinea pig)   2 2
Tupaia_belangeri_76   (Northern tree shrew)   1 1
Sus_scrofa_76_10.2   (Pig)   2 2
Bos_taurus_76_3.1   (Cattle)   2 2
Ovis_aries_76_3.1   (Sheep)   2 2
Vicugna_pacos_76_1   (Alpaca)   1 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_76_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   2 2
Felis_catus_76_6.2   (Domestic cat)   2 2
Equus_caballus_76_2   (Horse)   2 2
Myotis_lucifugus_76_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_76_1   (Large flying fox)   2 2
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   3 3
Echinops_telfairi_76   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   3 3
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_76_5   (Platypus)   1 1
Saccoglossus_kowalevskii_v3.0 2 2
Meleagris_gallopavo_76_2   (Turkey)   1 1
Gallus_gallus_76_4   (Chicken)   2 2
Anas_platyrhynchos_76_1.0   (Mallard)   1 1
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   2 2
Xenopus_laevis_   (African clawed frog)   6 6
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_76_1   (Coelacanth)   2 2
Lepisosteus_oculatus_76   (Spotted gar)   2 2
Gadus_morhua_76_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_76_4   (Torafugu)   1 1
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   2 2
Oryzias_latipes_76_1   (Japanese medaka)   4 3
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1 1
Poecilia_formosa_76   (Amazon molly)   1 1
Oreochromis_niloticus_76_1.0   (Nile tilapia)   1 1
Astyanax_mexicanus_76   (Mexican tetra)   2 2
Danio_rerio_76_9   (Zebrafish)   3 3
Oikopleura_dioica 1 1
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_76   (Vase tunicate)   1 1
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1 1
Adineta_vaga 3 3
Octopus_bimaculoides_280 3 3
Crassostrea_gigas_22   (Pacific oyster)   1 1
Lottia_gigantea_   (Owl limpet)   2 2
Helobdella_robusta_ 1 1
Capitella_sp._I_ 3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   3 3
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   1 1
Camponotus_floridanus_v3.3   (Florida carpenter ant)   1 1
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   1 1
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   1 1
Anopheles_darlingi_22   (American malaria mosquito)   1 1
Anopheles_gambiae_49_3j   (African malaria mosquito)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   1 1
Rhodnius_prolixus_22 1 1
Strigamia_maritima_22 1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1
Taenia_solium_   (Pork tapeworm)   1 1
Schistosoma_mansoni_ 1 1
Mnemiopsis_leidyi   (Sea walnut)   1 1
Acropora_digitifera_v1.0 2 2
Nematostella_vectensis_1.0   (Starlet sea anemone)   2 2
Amphimedon_queenslandica 2 2
Trichoplax_adhaerens_ 1 1
Proterospongia_sp._ATCC_50818_ 1 1
Mucor_circinelloides_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 1 1
Piloderma_croceum_F_1598_v1.0 2 2
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 1 1
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   1 1
Amanita_thiersii_Skay4041_v1.0 1 1
Galerina_marginata_v1.0 1 1
Hebeloma_cylindrosporum_h7_v2.0 1 1
Laccaria_bicolor_S238N-H82_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 1 1
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 2 2
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 1 1
Postia_placenta_ 1 1
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 5 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5 5
Phanerochaete_chrysosporium_RP-78_2.1 1 1
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 1 1
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 1 1
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 1 1
Sporotrichum_thermophile_ATCC_42464_ 1 1
Thielavia_terrestris_NRRL_8126_ 1 1
Chaetomium_globosum_CBS_148.51_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_dahliae_VdLs.17_ 1 1
Acremonium_alcalophilumv_1.0 1 1
Glomerella_graminicola_22 1 1
Fusarium_graminearum_ 3 3
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 3
Fusarium_verticillioides_7600_ 3 3
Trichoderma_asperellum_CBS_433.97_v1.0 1 1
Trichoderma_atroviride_ 1 1
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 2 2
Amorphotheca_resinae_v1.0   (Creosote fungus)   1 1
Botrytis_cinerea_B05.10_ 1 1
Sclerotinia_sclerotiorum_ 1 1
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Setosphaeria_turcica_v1.0 1 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 1 1
Cochliobolus_victoriae_FI3_v1.0 1 1
Cochliobolus_carbonum_26-R-13_v1.0 1 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   1 1
Alternaria_brassicicola_ 1 1
Cochliobolus_lunatus_m118_v2.0 1 1
Pyrenophora_teres_f._teres_22 1 1
Pyrenophora_tritici-repentis_ 2 2
Stagonospora_nodorum_ 2 2
Mycosphaerella_graminicola_IPO323_ 1 1
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 1 1
Mycosphaerella_fijiensis_CIRAD86_ 1 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 3 3
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 1 1
Aspergillus_fumigatus_Af293 1 1
Aspergillus_brasiliensis_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 1 1
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Neosartorya_fischeri_NRRL_181_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 1 1
Aspergillus_niger_22 1 1
Aspergillus_flavus_NRRL3357_ 1 1
Aspergillus_clavatus_NRRL_1_ 1 1
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Hansenula_polymorpha_v2.0 1 1
Dekkera_bruxellensis_CBS_2499_v2.0 1 1
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 3 2
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 3 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 1 1
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 3 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 4 4
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 1 1
Kluyveromyces_thermotolerans_CBS_6340 1 1
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 1 1
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   1 1
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Selaginella_moellendorffii_ 6 6
Eucalyptus_grandis_v201   (Rose gum)   3 3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 4 4
Citrus_clementina_v165 2 2
Citrus_sinensis_v154   (Sweet orange)   4 4
Thellungiella_halophila_v173 1 1
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   1 1
Capsella_rubella_v183 1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   2 2
Phaseolus_vulgaris_v186   (French bean)   1 1
Glycine_max_v109   (Soybean)   3 3
Cucumis_sativus_v122   (Cucumber)   1 1
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   2 2
Prunus_persica_v139   (Peach)   1 1
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   2 2
Vitis_vinifera_   (Wine grape)   2 2
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 1 1
Aquilegia_coerulea_v195 3 3
Triticum_urartu_22 1 1
Triticum_aestivum_22   (Bread wheat)   3 3
Aegilops_tauschii_22 1 1
Brachypodium_distachyon_   (Stiff brome)   2 2
Oryza_barthii_22   (African wild rice)   2 2
Oryza_meridionalis_22 3 3
Oryza_glumaepatula_22 1 1
Oryza_glaberrima   (African rice)   1 1
Oryza_punctata_22 1 1
Oryza_nivara_22 2 2
Oryza_brachyantha_22   (Malo sina)   1 1
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5 5
Oryza_sativa_v193   (Rice)   5 5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   3 3
Panicum_virgatum_v202   (Switchgrass)   2 2
Setaria_italica_v164   (Foxtail millet)   2 2
Zea_mays_subsp._mays_   (Maize)   4 4
Zea_mays_v181   (Maize)   3 3
Sorghum_bicolor_   (Sorghum)   1 1
Musa_balbisiana   (Balbis banana)   1 1
Amborella_trichopoda_22 1 1
Physcomitrella_patens 3 3
Thecamonas_trahens_ATCC_50062_ 2 2
Bigelowiella_natans_CCMP2755_22 3 3
Cyanophora_paradoxa_ 2 2
Ectocarpus_siliculosus 2 2
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 2 2
Pythium_irregulare_DAOM_BR486_22 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 1 1
Tetrahymena_thermophila_SB210_1_ 1 1
Symbiodinium_minutum_clade_B1_v1.2 3 3
Naegleria_gruberi_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 1 1
Leptolyngbya_sp._PCC_7376 2 2
Pseudanabaena_sp._PCC_7367 2 2
Acaryochloris_marina_MBIC11017 3 3
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 1 1
Microcoleus_sp._PCC_7113 1 1
Geitlerinema_sp._PCC_7407 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeocapsa_sp._PCC_7428 1 1
Rivularia_sp._PCC_7116 7 7
Anabaena_variabilis_ATCC_29413 3 3
Nostoc_sp._PCC_7107 3 3
Nostoc_punctiforme_PCC_73102 4 4
Nostoc_sp._PCC_7120 1 1
Nostoc_sp._PCC_7524 1 1
Anabaena_sp._90 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Acidothermus_cellulolyticus_11B 1 1
Catenulispora_acidiphila_DSM_44928 1 1
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_alni_ACN14a 1 1
Thermobifida_fusca_YX 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 5 5
Thermomonospora_curvata_DSM_43183 2 2
Streptosporangium_roseum_DSM_43021 5 5
Kitasatospora_setae_KM-6054 5 5
Streptomyces_coelicolor_A3(2) 5 5
Streptomyces_sp._PAMC26508 7 7
Streptomyces_flavogriseus_ATCC_33331 6 6
Streptomyces_sp._SirexAA-E 6 6
Streptomyces_griseus_subsp._griseus_NBRC_13350 1 1
Streptomyces_bingchenggensis_BCW-1 9 9
Streptomyces_violaceusniger_Tu_4113 2 2
Streptomyces_avermitilis_MA-4680 8 7
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 5 5
Streptomyces_scabiei_87.22 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 6 6
Actinosynnema_mirum_DSM_43827 2 2
Saccharomonospora_viridis_DSM_43017 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 1 1
Propionibacterium_propionicum_F0230a 1 1
Salinispora_arenicola_CNS-205 2 2
Salinispora_tropica_CNB-440 2 2
Verrucosispora_maris_AB-18-032 5 5
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._SE50/110 6 6
Actinoplanes_missouriensis_431 4 4
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 1 1
Rhodococcus_equi_103S 1 1
Rhodococcus_erythropolis_PR4 3 3
Nocardia_cyriacigeorgica_GUH-2 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_ulcerans_Agy99 1 1
Mycobacterium_marinum_M 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Corynebacterium_resistens_DSM_45100 1 1
Corynebacterium_glutamicum_R 1 1
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Cellulomonas_flavigena_DSM_20109 2 2
Cellulomonas_fimi_ATCC_484 1 1
Arthrobacter_phenanthrenivorans_Sphe3 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 1 1
Arthrobacter_sp._FB24 2 2
Mobiluncus_curtisii_ATCC_43063 1 1
Herpetosiphon_aurantiacus_DSM_785 2 2
Roseiflexus_sp._RS-1 2 2
Deinococcus_gobiensis_I-0 5 5
Deinococcus_deserti_VCD115 2 2
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 1 1
Veillonella_parvula_DSM_2008 3 3
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 6 6
Clostridiales_genomosp._BVAB3_str._UPII9-5 3 3
Clostridium_clariflavum_DSM_19732 8 8
Clostridium_cellulolyticum_H10 3 3
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 1 1
Ruminococcus_albus_7 12 12
butyrate-producing_bacterium_SS3/4 2 2
butyrate-producing_bacterium_SM4/1 2 2
Eubacterium_eligens_ATCC_27750 2 2
Filifactor_alocis_ATCC_35896 3 3
Clostridium_lentocellum_DSM_5427 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 3 3
Clostridium_cellulovorans_743B 1 1
Mahella_australiensis_50-1_BON 1 1
Lactobacillus_casei_ATCC_334 2 2
Lactobacillus_crispatus_ST1 1 1
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_salivarius_CECT_5713 1 1
Lactobacillus_sakei_subsp._sakei_23K 1 1
Streptococcus_sp._I-P16 4 4
Streptococcus_sp._I-G2 2 2
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_oralis_Uo5 3 3
Exiguobacterium_sp._MH3 4 4
Exiguobacterium_sp._AT1b 2 2
Exiguobacterium_sibiricum_255-15 8 8
Brevibacillus_brevis_NBRC_100599 12 12
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 6 6
Paenibacillus_mucilaginosus_3016 4 4
Paenibacillus_polymyxa_M1 10 10
Listeria_welshimeri_serovar_6b_str._SLCC5334 3 3
Listeria_innocua_Clip11262 4 4
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 2 2
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 3 3
Listeria_ivanovii_subsp._ivanovii_PAM_55 3 3
Solibacillus_silvestris_StLB046 2 2
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Lysinibacillus_sphaericus_C3-41 7 7
Geobacillus_thermodenitrificans_NG80-2 1 1
Bacillus_sp._JS 4 4
Bacillus_sp._1NLA3E 1 1
Bacillus_amyloliquefaciens_FZB42 5 5
Bacillus_atrophaeus_1942 4 4
Bacillus_subtilis_subsp._subtilis_str._168 7 7
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 8 8
Bacillus_thuringiensis_str._Al_Hakam 8 8
Bacillus_cereus_03BB102 9 9
Bacillus_anthracis_str._A0248 5 5
Bacillus_pseudofirmus_OF4 8 8
Bacillus_clausii_KSM-K16 5 5
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_pumilus_SAFR-032 4 4
Bacillus_megaterium_DSM_319 5 5
Haliscomenobacter_hydrossis_DSM_1100 3 3
Saprospira_grandis_str._Lewin 3 3
Niastella_koreensis_GR20-10 3 3
Chitinophaga_pinensis_DSM_2588 13 13
Candidatus_Cardinium_hertigii 3 3
Cytophaga_hutchinsonii_ATCC_33406 1 1
Tannerella_forsythia_ATCC_43037 1 1
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Bacteroides_salanitronis_DSM_18170 2 2
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Solitalea_canadensis_DSM_3403 4 4
Fluviicola_taffensis_DSM_16823 4 3
Owenweeksia_hongkongensis_DSM_17368 1 1
Krokinobacter_sp._4H-3-7-5 1 1
Lacinutrix_sp._5H-3-7-4 2 2
Zobellia_galactanivorans 1 1
Cellulophaga_lytica_DSM_7489 3 3
Capnocytophaga_canimorsus_Cc5 4 4
Capnocytophaga_ochracea_DSM_7271 1 1
Weeksella_virosa_DSM_16922 3 3
Flavobacterium_branchiophilum_FL-15 7 7
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 10 10
Waddlia_chondrophila_WSU_86-1044 1 1
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Parachlamydia_acanthamoebae_UV-7 1 1
Simkania_negevensis_Z 1 1
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_brasiliensis_DSM_5305 4 4
Planctomyces_limnophilus_DSM_3776 5 5
Pirellula_staleyi_DSM_6068 2 2
Methylacidiphilum_infernorum_V4 9 5
Leptospira_interrogans_serovar_Lai_str._IPAV 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 1 1
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Treponema_azotonutricium_ZAS-9 1 1
Treponema_primitia_ZAS-2 1 1
Treponema_denticola_ATCC_35405 2 2
Granulicella_mallensis_MP5ACTX8 1 1
Candidatus_Koribacter_versatilis_Ellin345 1 1
Sebaldella_termitidis_ATCC_33386 5 5
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Campylobacter_concisus_13826 1 1
Helicobacter_bizzozeronii_CIII-1 1 1
Helicobacter_felis_ATCC_49179 1 1
Helicobacter_acinonychis_str._Sheeba 1 1
Helicobacter_pylori_B38 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_lovleyi_SZ 1 1
Sorangium_cellulosum_'So_ce_56' 4 4
Stigmatella_aurantiaca_DW4/3-1 6 6
Corallococcus_coralloides_DSM_2259 6 6
Myxococcus_xanthus_DK_1622 8 8
Myxococcus_fulvus_HW-1 7 7
Azoarcus_sp._BH72 1 1
Dechlorosoma_suillum_PS 1 1
Laribacter_hongkongensis_HLHK9 1 1
Neisseria_meningitidis_alpha14 2 2
Neisseria_meningitidis_FAM18 2 2
Neisseria_lactamica_020-06 6 6
Neisseria_gonorrhoeae_NCCP11945 1 1
Cupriavidus_necator_N-1 1 1
Ralstonia_solanacearum_CFBP2957 2 2
Burkholderia_sp._CCGE1002 1 1
Burkholderia_cenocepacia_HI2424 2 2
Burkholderia_gladioli_BSR3 2 2
Burkholderia_glumae_BGR1 2 2
Delftia_acidovorans_SPH-1 1 1
Polaromonas_sp._JS666 1 1
Variovorax_paradoxus_S110 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_citrulli_AAC00-1 2 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Comamonas_testosteroni_CNB-2 2 2
Taylorella_equigenitalis_MCE9 1 1
Maricaulis_maris_MCS10 1 1
Hyphomonas_neptunium_ATCC_15444 1 1
Jannaschia_sp._CCS1 1 1
Tistrella_mobilis_KA081020-065 1 1
Azorhizobium_caulinodans_ORS_571 2 2
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_populi_BJ001 1 1
Methylobacterium_radiotolerans_JCM_2831 1 1
Ochrobactrum_anthropi_ATCC_49188 2 2
Sinorhizobium_meliloti_AK83 1 1
Rhizobium_etli_CIAT_652 2 2
Agrobacterium_radiobacter_K84 2 2
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Bradyrhizobium_japonicum_USDA_110 1 1
Bartonella_tribocorum_CIP_105476 9 9
Bartonella_grahamii_as4aup 18 18
Saccharophagus_degradans_2-40 3 3
Teredinibacter_turnerae_T7901 1 1
Cellvibrio_japonicus_Ueda107 1 1
Pasteurella_multocida_subsp._multocida_str._3480 2 2
Aeromonas_salmonicida_subsp._salmonicida_A449 2 2
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Photobacterium_profundum_SS9 1 1
Psychromonas_ingrahamii_37 1 1
Shewanella_piezotolerans_WP3 2 2
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 4 4
Shewanella_sp._MR-4 2 2
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 2 2
Shewanella_putrefaciens_CN-32 9 9
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 2 2
Hahella_chejuensis_KCTC_2396 8 8
Alcanivorax_borkumensis_SK2 2 2
Marinomonas_sp._MWYL1 1 1
Marinomonas_mediterranea_MMB-1 1 1
Methylomonas_methanica_MC09 2 2
Stenotrophomonas_maltophilia_K279a 4 4
Xanthomonas_campestris_pv._campestris_str._B100 2 1
Photorhabdus_asymbiotica 4 4
Photorhabdus_luminescens_subsp._laumondii_TTO1 5 5
Xenorhabdus_bovienii_SS-2004 1 1
Xenorhabdus_nematophila_ATCC_19061 2 2
Providencia_stuartii_MRSN_2154 2 2
Proteus_mirabilis_HI4320 2 2
Yersinia_pseudotuberculosis_IP_31758 4 4
Yersinia_pestis_Pestoides_F 3 3
Dickeya_zeae_Ech1591 2 2
Pectobacterium_wasabiae_WPP163 12 12
Pectobacterium_sp._SCC3193 12 12
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_pyrifoliae_Ep1/96 3 3
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Escherichia_fergusonii_ATCC_35469 3 3
Enterobacter_sp._R4-368 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 4 4
Azotobacter_vinelandii_DJ 1 1
Pseudomonas_sp._TKP 5 5
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 3 3
Pseudomonas_entomophila_L48 2 2
Pseudomonas_syringae_pv._tomato_str._DC3000 2 2
Pseudomonas_stutzeri_A1501 1 1
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 7 7
Pseudomonas_fluorescens_SBW25 1 1
Pseudomonas_mendocina_ymp 1 1
Pseudomonas_aeruginosa_UCBPP-PA14 2 2
Pseudomonas_sp._VLB120 3 3
Acinetobacter_oleivorans_DR1 2 2
Acinetobacter_calcoaceticus_PHEA-2 1 1
Natrinema_sp._J7-2 3 3

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   2 2
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   1 1
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 3 3
Histoplasma_capsulatum_H143 3 3
Histoplasma_capsulatum_H88 3 3
Histoplasma_capsulatum_G186AR 3 3
Aspergillus_fumigatus_A1163_ 1 1
Candida_albicans_WO-1_ 3 2
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 1 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_VL3 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_LalvinQA23 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 1 1
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_YJM789_ 1 1
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 1 1
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   1 1
Schizosaccharomyces_pombe_972h-_ 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Hordeum_vulgare_22   (Domesticated barley)   1 1
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   2 2
Chroococcidiopsis_thermalis_PCC_7203 1 1
Chamaesiphon_minutus_PCC_6605 1 1
Oscillatoria_nigro-viridis_PCC_7112 2 2
Oscillatoria_acuminata_PCC_6304 3 3
Cyanothece_sp._PCC_7822 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._PCC_7424 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanobacterium_aponinum_PCC_10605 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 3 3
Cylindrospermum_stagnale_PCC_7417 1 1
Anabaena_cylindrica_PCC_7122 1 1
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_albus_J1074 6 6
Streptomyces_rapamycinicus_NRRL_5491 6 5
Streptomyces_davawensis_JCM_4913 10 10
Streptomyces_fulvissimus_DSM_40593 5 5
Streptomyces_venezuelae_ATCC_10712 7 7
Streptomyces_collinus_Tu_365 7 7
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 6 6
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 6 6
Saccharothrix_espanaensis_DSM_44229 5 5
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 6 6
Actinoplanes_friuliensis_DSM_7358 4 4
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 2 2
Mycobacterium_liflandii_128FXT 1 1
Mycobacterium_smegmatis_str._MC2_155 1 1
Corynebacterium_glutamicum_MB001 2 2
Corynebacterium_glutamicum_SCgG2 1 1
Corynebacterium_glutamicum_SCgG1 1 1
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Bifidobacterium_thermophilum_RBL67 1 1
Actinomyces_viscosus_C505 3 3
Chthonomonas_calidirosea_T49 1 1
Deinococcus_peraridilitoris_DSM_19664 4 4
Ruminococcus_champanellensis_18P13 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 3 3
Clostridium_botulinum_BKT015925 1 1
Clostridium_botulinum_E3_str._Alaska_E43 2 2
Carnobacterium_maltaromaticum_LMA28 1 1
Enterococcus_mundtii_QU_25 1 1
Lactobacillus_paracasei_subsp._paracasei_8700:2 1 1
Lactobacillus_casei_LOCK919 1 1
Lactobacillus_casei_str._Zhang 2 2
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_salivarius_UCC118 1 1
Streptococcus_oligofermentans_AS_1.3089 7 7
Streptococcus_parasanguinis_FW213 1 1
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_A7 1 1
Streptococcus_suis_JS14 1 1
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Exiguobacterium_antarcticum_B7 3 3
Paenibacillus_sp._Y412MC10 9 9
Paenibacillus_mucilaginosus_KNP414 3 3
Paenibacillus_mucilaginosus_K02 3 3
Paenibacillus_polymyxa_CR1 7 7
Paenibacillus_polymyxa_SC2 10 10
Paenibacillus_polymyxa_E681 9 9
Listeria_monocytogenes_EGD_sequence 4 4
Listeria_monocytogenes_N53-1 1 1
Listeria_monocytogenes_La111 1 1
Listeria_monocytogenes_serotype_4b_str._LL195 4 4
Listeria_monocytogenes_07PF0776 4 4
Listeria_monocytogenes_M7 7 7
Listeria_monocytogenes_J1-220 2 2
Listeria_monocytogenes_J1816 3 3
Listeria_monocytogenes_SLCC2376 5 5
Listeria_monocytogenes_SLCC5850 4 4
Listeria_monocytogenes_ATCC_19117 3 3
Listeria_monocytogenes_L312 3 3
Listeria_monocytogenes_SLCC2479 3 3
Listeria_monocytogenes_SLCC7179 4 4
Listeria_monocytogenes_SLCC2540 4 4
Listeria_monocytogenes_SLCC2378 4 4
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 4 4
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 3 3
Listeria_monocytogenes_serotype_7_str._SLCC2482 4 4
Listeria_monocytogenes_08-5578 3 3
Listeria_monocytogenes_08-5923 3 3
Listeria_monocytogenes_L99 7 7
Listeria_monocytogenes_HCC23 7 7
Listeria_monocytogenes_10403S 4 4
Listeria_monocytogenes_J0161 3 3
Listeria_monocytogenes_Finland_1998 4 4
Listeria_monocytogenes_FSL_R2-561 3 3
Listeria_monocytogenes_serotype_4b_str._F2365 4 4
Listeria_monocytogenes_EGD-e 3 3
Geobacillus_sp._Y4.1MC1 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 9 9
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 6 6
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 5 5
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 6 6
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 5 5
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 7 7
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 5 5
Bacillus_amyloliquefaciens_LFB112 5 5
Bacillus_amyloliquefaciens_CC178 5 5
Bacillus_amyloliquefaciens_Y2 6 6
Bacillus_amyloliquefaciens_IT-45 4 4
Bacillus_amyloliquefaciens_XH7 6 6
Bacillus_amyloliquefaciens_LL3 4 4
Bacillus_amyloliquefaciens_TA208 6 6
Bacillus_amyloliquefaciens_DSM_7 5 5
Bacillus_licheniformis_9945A 6 6
Bacillus_subtilis_PY79 4 4
Bacillus_subtilis_XF-1 5 5
Bacillus_subtilis_QB928 7 7
Bacillus_subtilis_BSn5 2 2
Bacillus_subtilis_subsp._subtilis_str._BAB-1 5 5
Bacillus_subtilis_subsp._subtilis_str._BSP1 4 4
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 9 9
Bacillus_subtilis_subsp._subtilis_6051-HGW 7 7
Bacillus_subtilis_subsp._spizizenii_TU-B-10 7 7
Bacillus_subtilis_subsp._spizizenii_str._W23 3 3
Bacillus_subtilis_subsp._natto_BEST195 8 8
Bacillus_licheniformis_DSM_13_=_ATCC_14580 2 2
Bacillus_infantis_NRRL_B-14911 3 3
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 5 5
Bacillus_toyonensis_BCT-7112 6 6
Bacillus_thuringiensis_HD-771 11 11
Bacillus_thuringiensis_HD-789 10 10
Bacillus_thuringiensis_MC28 6 6
Bacillus_thuringiensis_serovar_chinensis_CT-43 4 4
Bacillus_thuringiensis_YBT-1518 4 4
Bacillus_thuringiensis_Bt407 3 3
Bacillus_thuringiensis_serovar_konkukian_str._97-27 15 15
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 7 7
Bacillus_thuringiensis_BMB171 5 5
Bacillus_thuringiensis_serovar_finitimus_YBT-020 6 6
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 4 4
Bacillus_cereus_FRI-35 3 3
Bacillus_cereus_biovar_anthracis_str._CI 4 4
Bacillus_cereus_AH820 5 5
Bacillus_cereus_AH187 4 4
Bacillus_cereus_B4264 4 4
Bacillus_cereus_G9842 9 9
Bacillus_cereus_Q1 3 3
Bacillus_cereus_F837/76 8 8
Bacillus_cereus_NC7401 4 4
Bacillus_cereus_E33L 6 6
Bacillus_cereus_ATCC_14579 8 8
Bacillus_cereus_ATCC_10987 2 2
Bacillus_anthracis_str._H9401 6 6
Bacillus_anthracis_str._CDC_684 6 6
Bacillus_anthracis_str._'Ames_Ancestor' 6 6
Bacillus_anthracis_str._Sterne 5 5
Bacillus_anthracis_str._Ames 5 5
Bacillus_anthracis_str._A2012 1 1
Bacillus_megaterium_WSH-002 7 7
Bacillus_megaterium_QM_B1551 7 7
Bacillus_coagulans_36D1 4 4
Staphylococcus_pasteuri_SP1 1 1
Emticicia_oligotrophica_DSM_17448 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_NCTC_9343 7 5
Nonlabens_dokdonensis_DSW-6 1 1
Singulisphaera_acidiphila_DSM_18658 5 5
Leptospira_interrogans_serovar_Lai_str._56601 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 1 1
Treponema_pedis_str._T_A4 5 5
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 2 2
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_SouthAfrica20 1 1
Helicobacter_pylori_UM066 1 1
Helicobacter_pylori_UM037 1 1
Helicobacter_pylori_OK310 1 1
Helicobacter_pylori_OK113 1 1
Helicobacter_pylori_Rif2 1 1
Helicobacter_pylori_Rif1 1 1
Helicobacter_pylori_HUP-B14 1 1
Helicobacter_pylori_PeCan18 1 1
Helicobacter_pylori_Shi169 2 2
Helicobacter_pylori_Shi112 1 1
Helicobacter_pylori_Shi417 1 1
Helicobacter_pylori_XZ274 1 1
Helicobacter_pylori_Aklavik86 1 1
Helicobacter_pylori_Aklavik117 1 1
Helicobacter_pylori_Puno135 1 1
Helicobacter_pylori_Puno120 1 1
Helicobacter_pylori_ELS37 1 1
Helicobacter_pylori_Gambia94/24 1 1
Helicobacter_pylori_SouthAfrica7 1 1
Helicobacter_pylori_India7 1 1
Helicobacter_pylori_Lithuania75 1 1
Helicobacter_pylori_2017 1 1
Helicobacter_pylori_2018 1 1
Helicobacter_pylori_908 1 1
Helicobacter_pylori_F57 1 1
Helicobacter_pylori_F30 1 1
Helicobacter_pylori_F16 1 1
Helicobacter_pylori_Sat464 2 2
Helicobacter_pylori_Cuz20 2 2
Helicobacter_pylori_SJM180 1 1
Helicobacter_pylori_B8 1 1
Helicobacter_pylori_v225d 2 2
Helicobacter_pylori_P12 1 1
Helicobacter_pylori_G27 1 1
Helicobacter_pylori_Shi470 2 2
Helicobacter_pylori_HPAG1 1 1
Helicobacter_pylori_F32 1 1
Helicobacter_pylori_J99 1 1
Helicobacter_pylori_26695 1 1
Helicobacter_pylori_26695 1 1
Geobacter_sp._M18 1 1
Sorangium_cellulosum_So0157-2 4 4
Myxococcus_stipitatus_DSM_14675 8 8
Neisseria_meningitidis_WUE_2594 3 3
Neisseria_meningitidis_G2136 2 2
Neisseria_meningitidis_M04-240196 4 4
Neisseria_meningitidis_M01-240149 3 3
Neisseria_meningitidis_NZ-05/33 3 3
Neisseria_meningitidis_M01-240355 4 4
Neisseria_meningitidis_8013 4 4
Neisseria_meningitidis_053442 3 3
Neisseria_meningitidis_Z2491 3 3
Neisseria_meningitidis_H44/76 3 3
Neisseria_meningitidis_alpha710 2 2
Neisseria_meningitidis_MC58 3 3
Neisseria_gonorrhoeae_TCDC-NG08107 1 1
Neisseria_gonorrhoeae_FA_1090 1 1
Ralstonia_solanacearum_CMR15 1 1
Burkholderia_lata 1 1
Burkholderia_ambifaria_MC40-6 2 2
Burkholderia_cenocepacia_MC0-3 3 3
Burkholderia_cenocepacia_AU_1054 1 1
Burkholderia_cenocepacia_J2315 1 1
Variovorax_paradoxus_B4 3 3
Variovorax_paradoxus_EPS 1 1
Taylorella_equigenitalis_14/56 1 1
Taylorella_equigenitalis_ATCC_35865 1 1
Bordetella_bronchiseptica_MO149 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 1 1
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 1 1
Mannheimia_succiniciproducens_MBEL55E 1 1
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 1 1
Pasteurella_multocida_36950 3 3
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 2 2
Vibrio_nigripulchritudo_VibrioScope 1 1
Shewanella_sp._W3-18-1 6 6
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 2 2
Shewanella_baltica_OS117 2 2
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 2 2
Shewanella_baltica_OS155 2 2
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 6 6
Glaciecola_psychrophila_170 1 1
Alcanivorax_dieselolei_B5 2 2
Thalassolituus_oleivorans_MIL-1 1 1
Stenotrophomonas_maltophilia_D457 2 2
Stenotrophomonas_maltophilia_JV3 3 3
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2 1
Xanthomonas_axonopodis_pv._citrumelo_F1 2 1
Xanthomonas_campestris_pv._raphani_756C 2 1
Xanthomonas_campestris_pv._campestris_str._8004 2 1
Yersinia_pseudotuberculosis_PB1/+ 3 3
Yersinia_pseudotuberculosis_YPIII 3 3
Yersinia_pseudotuberculosis_IP_32953 3 3
Yersinia_pestis_biovar_Microtus_str._91001 4 4
Yersinia_pestis_A1122 4 4
Yersinia_pestis_Z176003 4 4
Yersinia_pestis_D182038 4 4
Yersinia_pestis_D106004 4 4
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 4 4
Yersinia_pestis_Nepal516 4 4
Yersinia_pestis_Antiqua 4 4
Yersinia_pestis_Angola 3 3
Yersinia_pestis_CO92 4 4
Yersinia_pestis_KIM10+ 4 4
Serratia_marcescens_FGI94 3 3
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 3 3
Dickeya_dadantii_3937 1 1
Cronobacter_sakazakii_CMCC_45402 3 3
Cronobacter_sakazakii_SP291 6 6
Cronobacter_sakazakii_ATCC_BAA-894 3 3
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Escherichia_coli_E24377A 1 1
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_LY180 1 1
Escherichia_coli_O7:K1_str._CE10 1 1
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_P12b 1 1
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 1 1
Escherichia_coli_IHE3034 1 1
Escherichia_coli_O83:H1_str._NRG_857C 1 1
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_ED1a 1 1
Escherichia_coli_IAI39 1 1
Escherichia_coli_UMN026 3 3
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SE11 1 1
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 1 1
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 1 1
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 3 3
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_10701 2 2
Pseudomonas_stutzeri_DSM_4166 1 1
Pseudomonas_stutzeri_RCH2 1 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1 1
Pseudomonas_monteilii_SB3101 4 4
Pseudomonas_monteilii_SB3078 4 4
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 2 2
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 4 4
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 2 2
Pseudomonas_putida_GB-1 1 1
Pseudomonas_protegens_CHA0 7 7
Pseudomonas_poae_RE*1-1-14 3 3
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_resinovorans_NBRC_106553 1 1
Pseudomonas_mendocina_NK-01 1 1
Pseudomonas_aeruginosa_SCV20265 2 2
Pseudomonas_aeruginosa_MTB-1 2 2
Pseudomonas_aeruginosa_LES431 2 2
Pseudomonas_aeruginosa_RP73 2 2
Pseudomonas_aeruginosa_B136-33 2 2
Pseudomonas_aeruginosa_PA1R 2 2
Pseudomonas_aeruginosa_PA1 2 2
Pseudomonas_aeruginosa_DK2 2 2
Pseudomonas_aeruginosa_NCGM2.S1 2 2
Pseudomonas_aeruginosa_M18 2 2
Pseudomonas_aeruginosa_LESB58 2 2
Pseudomonas_aeruginosa_PA7 3 3
Pseudomonas_aeruginosa_PAO1 2 2
Acinetobacter_sp.__SH024 2 2
Acinetobacter_baumannii_BJAB0715 1 1
Acinetobacter_baumannii_D1279779 1 1
Acinetobacter_baumannii__ATCC_19606 3 3
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AYE 2 2
Acinetobacter_baumannii_AB0057 1 1
Acinetobacter_junii__SH205 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   2 2
Pan_troglodytes_69_2.1.4   (Chimpanzee)   2 2
Gorilla_gorilla_69_3.1   (Western gorilla)   2 2
Pongo_abelii_69_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   2 2
Macaca_mulatta_69_1   (Rhesus monkey)   2 2
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   2 2
Otolemur_garnettii_69_3   (Small-eared galago)   2 2
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   2 2
Mus_musculus_69_38   (House mouse)   2 2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Cavia_porcellus_69_3   (Domestic guinea pig)   2 2
Tupaia_belangeri_69   (Northern tree shrew)   1 1
Sus_scrofa_69_10.2   (Pig)   2 2
Bos_taurus_69_3.1   (Cattle)   2 2
Vicugna_pacos_69_1   (Alpaca)   1 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   2 2
Mustela_putorius_furo_69_1.0   (Domestic ferret)   2 2
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   2 2
Felis_catus_69   (Domestic cat)   2 2
Equus_caballus_69_2   (Horse)   2 2
Myotis_lucifugus_69_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_69_1   (Large flying fox)   2 2
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   2 2
Echinops_telfairi_69   (Small Madagascar hedgehog)   2 2
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   3 3
Ornithorhynchus_anatinus_69_5   (Platypus)   1 1
Meleagris_gallopavo_69_2   (Turkey)   1 1
Gallus_gallus_69_2   (Chicken)   2 2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   2 2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   1 1
Latimeria_chalumnae_69_1   (Coelacanth)   1 1
Gadus_morhua_69_1   (Atlantic cod)   2 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_69_4   (Torafugu)   1 1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   2 2
Oryzias_latipes_69_1   (Japanese medaka)   3 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   1 1
Danio_rerio_69_9   (Zebrafish)   2 2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   15 15
Homo_sapiens__(NCBI_version)   (Human)   3 3
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2 2
Lotus_japonicus__(Early_assembly) 1 1
Malus_x_domestica_(Duplicate)   (Apple)   2 2
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 2 2
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
NCBI_plasmid_sequences_(Plasmids) 85 85
NCBI_viral_sequences_(Viral) 3 3
TargetDB__(Targets) 80 78
STRING_v9.0.5_(STRING) 807 795
PDB_chains_(SCOP_1.75)_(PDB) 3 3
Uniprot_2018_03_genome 21688 21551
Protein_Data_Bank_(all_PDB_sequenc) 8 8
NCBI_2017_08_genome 66942 66559
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 18 18
UniProt__viral_sequences_(Viral) 3 3

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