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Domain combinations for Prefoldin superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Prefoldin domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   89 89
Pan_troglodytes_76_2.1.4   (Chimpanzee)   21 21
Gorilla_gorilla_76_3.1   (Western gorilla)   33 33
Pongo_abelii_76_2   (Sumatran orangutan)   26 26
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   21 21
Papio_anubis_76   (Olive baboon)   22 22
Macaca_mulatta_76_1   (Rhesus monkey)   37 37
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   35 35
Otolemur_garnettii_76_3   (Small-eared galago)   27 27
Microcebus_murinus_76_1   (Gray mouse lemur)   21 21
Rattus_norvegicus_76_5.0   (Norway rat)   21 21
Mus_musculus_76_38   (House mouse)   41 41
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   15 15
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   21 21
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   32 32
Cavia_porcellus_76_3   (Domestic guinea pig)   18 18
Oryctolagus_cuniculus_76_2   (Rabbit)   26 26
Ochotona_princeps_76   (American pika)   20 20
Tupaia_belangeri_76   (Northern tree shrew)   15 15
Sus_scrofa_76_10.2   (Pig)   25 25
Bos_taurus_76_3.1   (Cattle)   22 22
Ovis_aries_76_3.1   (Sheep)   26 26
Vicugna_pacos_76_1   (Alpaca)   6 6
Tursiops_truncatus_76_1   (Bottlenose dolphin)   17 17
Mustela_putorius_furo_76_1.0   (Domestic ferret)   25 25
Ailuropoda_melanoleuca_76_1   (Giant panda)   26 26
Canis_familiaris_76_3.1   (Dog)   34 34
Felis_catus_76_6.2   (Domestic cat)   24 24
Equus_caballus_76_2   (Horse)   28 28
Myotis_lucifugus_76_2.0   (Little brown bat)   27 27
Pteropus_vampyrus_76_1   (Large flying fox)   19 19
Sorex_araneus_76_1   (European shrew)   12 12
Erinaceus_europaeus_76   (Western European hedgehog)   17 17
Procavia_capensis_76_1   (Cape rock hyrax)   15 15
Loxodonta_africana_76_3   (African savanna elephant)   28 28
Echinops_telfairi_76   (Small Madagascar hedgehog)   13 13
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   30 29
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 8
Macropus_eugenii_76_1.0   (Tammar wallaby)   20 20
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   30 30
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   19 19
Ornithorhynchus_anatinus_76_5   (Platypus)   20 20
Saccoglossus_kowalevskii_v3.0 14 14
Petromyzon_marinus_76_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_76_2   (Turkey)   23 23
Gallus_gallus_76_4   (Chicken)   17 17
Anas_platyrhynchos_76_1.0   (Mallard)   19 19
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   12 12
Ficedula_albicollis_76_1.0   (Collared flycatcher)   17 17
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   17 17
Anolis_carolinensis_76_2.0   (Green anole)   16 16
Xenopus_laevis_   (African clawed frog)   27 27
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   18 18
Latimeria_chalumnae_76_1   (Coelacanth)   12 12
Lepisosteus_oculatus_76   (Spotted gar)   17 17
Gadus_morhua_76_1   (Atlantic cod)   12 12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   12 12
Takifugu_rubripes_76_4   (Torafugu)   46 45
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   16 16
Oryzias_latipes_76_1   (Japanese medaka)   18 18
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   12 12
Poecilia_formosa_76   (Amazon molly)   14 14
Oreochromis_niloticus_76_1.0   (Nile tilapia)   22 22
Astyanax_mexicanus_76   (Mexican tetra)   15 15
Danio_rerio_76_9   (Zebrafish)   20 20
Oikopleura_dioica 12 12
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_76   (Vase tunicate)   9 9
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   9 9
Adineta_vaga 13 13
Octopus_bimaculoides_280 11 11
Crassostrea_gigas_22   (Pacific oyster)   6 6
Lottia_gigantea_   (Owl limpet)   9 9
Helobdella_robusta_ 8 8
Capitella_sp._I_ 9 9
Danaus_plexippus_OGS1.0   (Monarch butterfly)   9 9
Heliconius_melpomene_   (Postman butterfly)   8 8
Bombyx_mori_   (Domestic silkworm)   5 5
Nasonia_vitripennis_   (Jewel wasp)   8 8
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   14 14
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   9 9
Linepithema_humile_v1.1   (Argentine ant)   8 8
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   8 8
Solenopsis_invicta_v.2.2.3   (Red fire ant)   7 7
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   8 8
Atta_cephalotes_v1.1 9 9
Camponotus_floridanus_v3.3   (Florida carpenter ant)   9 9
Lucilia_cuprina   (Australian sheep blowfly)   9 9
Drosophila_grimshawi_1.3 9 9
Drosophila_willistoni_1.3 10 10
Drosophila_pseudoobscura_2.13 9 9
Drosophila_persimilis_1.3 9 9
Drosophila_suzukii 11 11
Drosophila_yakuba_1.3 9 9
Drosophila_simulans_1.3 9 9
Drosophila_sechellia_1.3 11 11
Drosophila_melanogaster_76_5   (Fruit fly)   14 14
Drosophila_erecta_1.3 10 10
Drosophila_ananassae_1.3 10 10
Drosophila_virilis_1.2 9 9
Drosophila_mojavensis_1.3 9 9
Megaselia_scalaris_22 6 6
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   11 11
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   9 9
Anopheles_darlingi_22   (American malaria mosquito)   6 6
Anopheles_gambiae_49_3j   (African malaria mosquito)   9 9
Tribolium_castaneum_3.0   (Red flour beetle)   8 8
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   8 8
Acyrthosiphon_pisum_   (Pea aphid)   10 10
Rhodnius_prolixus_22 8 8
Daphnia_pulex_   (Common water flea)   9 9
Strigamia_maritima_22 9 9
Sarcoptes_scabiei 7 7
Tetranychus_urticae_   (Two-spotted spider mite)   8 8
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   8 8
Pristionchus_pacificus_ 6 6
Meloidogyne_incognita_   (Southern root-knot nematode)   9 9
Meloidogyne_hapla_ 9 9
Onchocerca_volvulus_22 8 8
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   9 9
Caenorhabditis_japonica_ 7 7
Caenorhabditis_brenneri_ 12 12
Caenorhabditis_remanei_ 9 9
Caenorhabditis_elegans_76_235   (Roundworm)   10 10
Caenorhabditis_briggsae_2 8 8
Trichinella_spiralis_22 8 8
Hymenolepis_microstoma_ 8 8
Echinococcus_multilocularis_ 9 9
Echinococcus_granulosus_ 8 8
Taenia_solium_   (Pork tapeworm)   8 8
Schistosoma_mansoni_ 8 8
Mnemiopsis_leidyi   (Sea walnut)   9 9
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 6 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   9 9
Hydra_vulgaris 8 8
Amphimedon_queenslandica 10 10
Trichoplax_adhaerens_ 7 7
Proterospongia_sp._ATCC_50818_ 7 7
Monosiga_brevicollis_ 7 7
Sphaeroforma_arctica_JP610_ 9 9
Capsaspora_owczarzaki_ATCC_30864_ 10 10
Conidiobolus_coronatus_NRRL28638_v1.0 8 8
Mortierella_verticillata_NRRL_6337_ 10 10
Phycomyces_blakesleeanus_ 9 9
Rhizopus_oryzae_RA_99-880_ 9 9
Mucor_circinelloides_ 8 8
Rhizomucor_miehei_CAU432_ 8 8
Malassezia_globosa_CBS_7966_ 6 6
Sporisorium_reilianum_22 7 7
Ustilago_maydis_ 6 6
Mixia_osmundae_IAM_14324_v1.0 6 6
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 6
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 5
Melampsora_laricis-populina_ 6 6
Rhodotorula_graminis_WP1_v1.0 7 7
Sporobolomyces_roseus_IAM_13481_ 4 4
Microbotryum_violaceum_22 7 7
Wallemia_sebi_v1.0 6 6
Sphaerobolus_stellatus_v1.0 7 7
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 6 6
Coniophora_puteana 6 6
Hydnomerulius_pinastri_v2.0 6 6
Paxillus_rubicundulus_Ve08.2h10_v1.0 7 7
Pisolithus_microcarpus_441_v1.0 6 6
Pisolithus_tinctorius_Marx_270_v1.0 7 7
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 7 7
Pleurotus_ostreatus_   (Oyster mushroom)   6 6
Amanita_thiersii_Skay4041_v1.0 7 7
Amanita_muscaria_Koide_v1.0   (Fly agaric)   6 6
Galerina_marginata_v1.0 6 6
Hebeloma_cylindrosporum_h7_v2.0 6 6
Laccaria_bicolor_S238N-H82_ 7 6
Agaricus_bisporus_var._bisporus_ 6 6
Schizophyllum_commune_ 6 6
Stereum_hirsutum_FP-91666_SS1__v1.0 6 6
Heterobasidion_annosum_ 5 5
Gloeophyllum_trabeumv1.0 6 6
Punctularia_strigosozonata_v1.0 4 4
Sebacina_vermifera_MAFF_305830_v1.0 5 5
Fomitiporia_mediterranea_v1.0 5 5
Tulasnella_calospora_AL13/4D_v1.0 6 6
Postia_placenta_ 13 13
Wolfiporia_cocos_MD-104_SS10__v1.0 6 6
Fomitopsis_pinicolav1.0 6 6
Fomitopsis_pinicola_FP-58527_SS1_v3.0 6 6
Phanerochaete_chrysosporium_RP-78_2.1 6 6
Dichomitus_squalens 5 5
Trametes_versicolor_v1.0 5 5
Tremella_mesenterica_   (Witches' butter)   7 7
Daldinia_eschscholzii_EC12_v1.0 7 7
Apiospora_montagnei_NRRL_25634_v1.0 7 7
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 7 7
Podospora_anserina_ 6 6
Sporotrichum_thermophile_ATCC_42464_ 6 6
Thielavia_terrestris_NRRL_8126_ 6 6
Chaetomium_globosum_CBS_148.51_ 5 5
Neurospora_tetrasperma_ 5 5
Neurospora_discreta_FGSC_8579_ 5 5
Neurospora_crassa_OR74A_ 6 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   7 7
Verticillium_albo-atrum_VaMs.102_ 6 6
Verticillium_dahliae_VdLs.17_ 7 7
Acremonium_alcalophilumv_1.0 7 7
Glomerella_graminicola_22 7 7
Fusarium_graminearum_ 7 7
Nectria_haematococca_mpVI_ 7 7
Fusarium_oxysporum_f._sp._lycopersici_4286_ 6 6
Fusarium_verticillioides_7600_ 6 6
Trichoderma_asperellum_CBS_433.97_v1.0 6 6
Trichoderma_atroviride_ 6 6
Trichoderma_citrinoviride_v1.0 6 6
Trichoderma_reesei_1.2 7 7
Trichoderma_virens_Gv29-8_ 7 7
Trichoderma_longibrachiatum_ATCC_18648_v1.0 6 6
Trichoderma_harzianum_CBS_226.95_v1.0 6 6
Amorphotheca_resinae_v1.0   (Creosote fungus)   7 7
Botrytis_cinerea_B05.10_ 7 7
Sclerotinia_sclerotiorum_ 7 7
Blumeria_graminis_22 6 6
Didymella_exigua_CBS_183.55_v1.0 5 5
Leptosphaeria_maculans_22 7 7
Setosphaeria_turcica_v1.0 7 7
Cochliobolus_miyabeanus_ATCC_44560_v1.0 7 7
Cochliobolus_victoriae_FI3_v1.0 7 7
Cochliobolus_carbonum_26-R-13_v1.0 7 7
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 6
Alternaria_brassicicola_ 7 7
Cochliobolus_lunatus_m118_v2.0 7 7
Pyrenophora_teres_f._teres_22 9 9
Pyrenophora_tritici-repentis_ 7 7
Stagonospora_nodorum_ 7 7
Mycosphaerella_graminicola_IPO323_ 7 7
Zasmidium_cellare_ATCC_36951_v1.0 7 7
Dothistroma_septosporum 6 6
Septoria_musiva_v1.0 6 6
Mycosphaerella_fijiensis_CIRAD86_ 8 8
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7 7
Paracoccidioides_brasiliensis_Pb18_ 7 7
Coccidioides_posadasii_RMSCC_3488_ 7 7
Coccidioides_immitis_RS_ 7 7
Ajellomyces_dermatitidis_SLH14081_ 6 6
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 6 6
Microsporum_canis_CBS_113480_ 7 7
Trichophyton_equinum_CBS_127.97_ 7 7
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 6 6
Trichophyton_tonsurans_CBS_112818_ 6 6
Trichophyton_rubrum_CBS_118892_ 6 6
Uncinocarpus_reesii_1704_ 5 5
Aspergillus_zonatus_v1.0 7 7
Penicillium_chrysogenum_Wisconsin_54-1255_ 7 7
Penicillium_chrysogenum_v1.0 7 7
Aspergillus_acidus_v1.0 7 7
Aspergillus_fumigatus_Af293 7 7
Aspergillus_brasiliensis_v1.0 7 7
Aspergillus_nidulans_FGSC_A4_ 7 7
Aspergillus_sydowii_v1.0 7 7
Aspergillus_versicolor_v1.0 7 7
Aspergillus_glaucus 7 7
Aspergillus_carbonarius_ITEM_5010_ 7 7
Neosartorya_fischeri_NRRL_181_ 7 7
Aspergillus_terreus_NIH2624_ 6 6
Aspergillus_tubingensis_v1.0 7 7
Aspergillus_wentii_v1.0 7 7
Aspergillus_oryzae_RIB40_ 6 6
Aspergillus_niger_22 7 7
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 8 8
Aspergillus_clavatus_NRRL_1_ 7 7
Penicillium_marneffei_ATCC_18224_ 7 7
Tuber_melanosporum_Mel28_22 7 7
Tuber_melanosporum_Vittad_   (Perigord truffle)   7 7
Hansenula_polymorpha_v2.0 5 5
Dekkera_bruxellensis_CBS_2499_v2.0 8 8
Pichia_membranifaciensv1.0 6 6
Candida_tanzawaensis_NRRL_Y-17324__v1.0 7 7
Candida_dubliniensis_CD36_ 7 7
Candida_tropicalis_MYA-3404_ 7 7
Candida_parapsilosis_ 6 6
Candida_albicans_SC5314 7 7
Lodderomyces_elongisporus_NRRL_YB-4239_ 6 6
Babjeviella_inositovora_NRRL_Y-12698_v1.0 8 8
Pichia_stipitis_CBS_6054_ 7 7
Candida_guilliermondii_ATCC_6260_ 7 7
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 6 6
Debaromyces_hansenii 7 7
Wickerhamomyces_anomalus 7 7
Pichia_pastoris_GS115_ 6 6
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 5 5
Yarrowia_lipolytica_CLIB122 7 7
Candida_lusitaniae_ATCC_42720_ 7 7
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 6 6
Vanderwaltozyma_polyspora_DSM_70294_ 7 7
Candida_glabrata_CBS138 7 7
Kluyveromyces_thermotolerans_CBS_6340 7 7
Lachancea_kluyveri_ 6 6
Kluyveromyces_waltii 7 7
Ashbya_gossypii_ATCC_10895_ 7 7
Zygosaccharomyces_rouxii_ 6 6
Saccharomyces_mikatae_MIT 7 7
Saccharomyces_paradoxus_MIT 9 9
Saccharomyces_cerevisiae_76   (Baker's yeast)   7 7
Saccharomyces_bayanus_MIT 6 6
Kluyveromyces_lactis 7 7
Schizosaccharomyces_cryophilus_OY26_22 6 6
Schizosaccharomyces_octosporus_yFS286_ 6 6
Schizosaccharomyces_japonicus_yFS275_ 6 6
Schizosaccharomyces_pombe   (Fission yeast)   6 6
Catenaria_anguillulae_PL171_v1.0 8 8
Allomyces_macrogynus_ATCC_38327_ 16 16
Spizellomyces_punctatus_DAOM_BR117_ 8 8
Dictyostelium_discoideum 8 8
Dictyostelium_purpureum_ 8 8
Entamoeba_dispar_1.2 7 7
Entamoeba_invadens_1.2 8 8
Entamoeba_histolytica_1 9 9
Selaginella_moellendorffii_ 14 14
Pinus_taeda   (Loblolly pine)   5 5
Picea_abies   (Norway spruce)   6 6
Eucalyptus_grandis_v201   (Rose gum)   24 24
Theobroma_cacao_B97-61/B2_v1   (Cacao)   10 10
Gossypium_raimondii_v221 26 26
Citrus_clementina_v165 19 19
Citrus_sinensis_v154   (Sweet orange)   19 19
Thellungiella_halophila_v173 10 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   14 14
Capsella_rubella_v183 10 10
Arabidopsis_lyrata_   (Lyrate rockcress)   13 13
Arabidopsis_thaliana_10   (Thale cress)   13 13
Carica_papaya_   (Papaya)   4 4
Medicago_truncatula_   (Barrel medic)   21 21
Phaseolus_vulgaris_v186   (French bean)   11 11
Glycine_max_v109   (Soybean)   34 34
Cucumis_sativus_v122   (Cucumber)   10 10
Fragaria_vesca_   (Wild strawberry)   6 6
Malus_domestica_v196   (Apple)   21 21
Prunus_persica_v139   (Peach)   10 10
Linum_usitatissimum_v200   (Flax)   18 18
Manihot_esculenta_v147   (Cassava)   13 13
Populus_trichocarpa_v156   (Black cottonwood)   15 15
Vitis_vinifera_   (Wine grape)   9 9
Mimulus_guttatus_v140   (Spotted monkey flower)   13 13
Solanum_lycopersicum_v.2.3   (Tomato)   8 8
Solanum_tuberosum_   (Potato)   13 13
Actinidia_chinensis_Hongyang_ 11 11
Aquilegia_coerulea_v195 13 13
Triticum_urartu_22 14 14
Triticum_aestivum_22   (Bread wheat)   24 24
Aegilops_tauschii_22 10 10
Brachypodium_distachyon_   (Stiff brome)   11 11
Oryza_barthii_22   (African wild rice)   12 12
Oryza_meridionalis_22 10 10
Oryza_glumaepatula_22 9 9
Oryza_glaberrima   (African rice)   9 9
Oryza_punctata_22 14 14
Oryza_nivara_22 9 9
Oryza_brachyantha_22   (Malo sina)   11 11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   14 14
Oryza_sativa_v193   (Rice)   14 14
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   10 10
Panicum_virgatum_v202   (Switchgrass)   25 25
Setaria_italica_v164   (Foxtail millet)   12 12
Zea_mays_subsp._mays_   (Maize)   21 21
Zea_mays_v181   (Maize)   23 23
Sorghum_bicolor_   (Sorghum)   11 9
Musa_balbisiana   (Balbis banana)   10 10
Musa_acuminata_22   (Wild Malaysian banana)   12 12
Amborella_trichopoda_22 8 8
Physcomitrella_patens 9 8
Coccomyxa_subellipsoidea_sp._C-169_v2 4 4
Asterochloris_sp._Cgr/DA1pho_v1.0 6 6
Chlorella_variabilis_sp._NC64A_ 5 5
Chlorella_vulgaris_ 6 6
Volvox_carteri_f._nagariensis_ 6 6
Volvox_carteri_v199 8 8
Chlamydomonas_reinhardtii_4.0 8 8
Ostreococcus_sp._RCC809_ 9 9
Ostreococcus_lucimarinus_CCE9901_ 7 7
Ostreococcus_tauri_ 7 7
Bathycoccus_prasinos_ 8 8
Micromonas_sp._RCC299_ 6 6
Micromonas_pusilla_CCMP1545_v3.0 6 6
Cyanidioschyzon_merolae_strain_10D_22 4 4
Cyanidioschyzon_merolae 5 5
Porphyridium_purpureum_02_2012 7 7
Thecamonas_trahens_ATCC_50062_ 7 7
Bigelowiella_natans_CCMP2755_22 9 9
Giardia_lamblia_2.3 6 6
Cyanophora_paradoxa_ 8 8
Leishmania_mexicana_2.4 8 8
Leishmania_major_strain_Friedlin_ 8 8
Leishmania_infantum_JPCM5_2.4 8 8
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 8 8
Trypanosoma_vivax_ 7 7
Trypanosoma_cruzi_strain_CL_Brener 8 8
Trypanosoma_congolense_2.4 8 8
Trypanosoma_brucei_gambiense_v4.1 8 8
Trypanosoma_brucei_TREU927_v4.1 9 9
Ectocarpus_siliculosus 7 7
Aureococcus_anophagefferens_ 5 5
Albugo_laibachii_22 19 19
Pythium_iwayamai_DAOM_BR242034_22 8 8
Pythium_arrhenomanes_ATCC_12531_22 8 8
Pythium_ultimum_v1.7-2 7 7
Pythium_aphanidermatum_DAOM_BR444_22 6 6
Pythium_irregulare_DAOM_BR486_22 7 7
Pythium_vexans_DAOM_BR484_22 6 6
Phytophthora_ramorum_1.1   (Sudden oak death agent)   8 8
Phytophthora_sojae_1.1 6 6
Phytophthora_infestans_T30-4_ 8 8
Phytophthora_capsici_ 8 8
Hyaloperonospora_arabidopsidis_22 7 7
Phaeodactylum_tricornutumCCAP_1055/1 5 5
Fragilariopsis_cylindrus 8 8
Thalassiosira_pseudonana_CCMP1335 5 5
Perkinsus_marinus_ATCC_50983_ 12 12
Paramecium_tetraurelia_ 15 15
Tetrahymena_thermophila_SB210_1_ 9 9
Ichthyophthirius_multifiliis_strain_G5_ 6 6
Cryptosporidium_hominis 3 3
Cryptosporidium_muris 7 7
Cryptosporidium_parvum_Iowa_II 5 5
Neospora_caninum 6 6
Toxoplasma_gondii_VEG 6 6
Toxoplasma_gondii_ME49 6 6
Toxoplasma_gondii_GT1 6 6
Babesia_bovis_T2Bo_ 10 10
Theileria_parva__ 4 4
Theileria_annulata 5 5
Plasmodium_falciparum_3D7_ 9 9
Plasmodium_vivax_SaI-1_7.0 8 8
Plasmodium_knowlesi_strain_H_ 6 6
Plasmodium_yoelii_ssp._yoelii_1_ 4 4
Plasmodium_chabaudi_ 9 9
Plasmodium_berghei_ANKA_ 9 9
Symbiodinium_minutum_clade_B1_v1.2 8 8
Naegleria_gruberi_ 8 8
Trichomonas_vaginalis_ 11 11
Guillardia_theta_CCMP2712_v1.0_ 10 10
Emiliania_huxleyi_CCMP1516_ 11 11
Acaryochloris_marina_MBIC11017 1 1
Cyanothece_sp._PCC_8802 1 1
Halothece_sp._PCC_7418 1 1
Mycoplasma_haemocanis_str._Illinois 1 1
Desulfotomaculum_acetoxidans_DSM_771 1 1
Eubacterium_rectale_M104/1 1 1
Clostridium_tetani_E88 2 2
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Oenococcus_oeni_PSU-1 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Geobacillus_thermoleovorans_CCB_US3_UF5 1 1
Geobacillus_kaustophilus_HTA426 1 1
Geobacillus_sp._GHH01 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Bacillus_clausii_KSM-K16 2 2
Bacillus_cellulosilyticus_DSM_2522 1 1
Staphylococcus_lugdunensis_HKU09-01 1 1
Borrelia_burgdorferi_B31 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermovibrio_ammonificans_HB-1 2 2
Aquifex_aeolicus_VF5 2 2
Hydrogenobacter_thermophilus_TK-6 1 1
Phaeobacter_gallaeciensis_2.10 1 1
Jannaschia_sp._CCS1 1 1
Ruegeria_sp._TM1040 1 1
Roseobacter_litoralis_Och_149 1 1
Roseobacter_denitrificans_OCh_114 1 1
Kangiella_koreensis_DSM_16069 1 1
Halorhodospira_halophila_SL1 1 1
Azotobacter_vinelandii_DJ 1 1
Nanoarchaeum_equitans_Kin4-M 2 2
Candidatus_Caldiarchaeum_subterraneum 3 3
Cenarchaeum_symbiosum_A 2 2
Candidatus_Nitrosopumilus_sp._AR2 2 2
Nitrosopumilus_maritimus_SCM1 2 2
Candidatus_Korarchaeum_cryptofilum_OPF8 2 2
Acidilobus_saccharovorans_345-15 2 2
Fervidicoccus_fontis_Kam940 3 3
Pyrolobus_fumarii_1A 2 2
Hyperthermus_butylicus_DSM_5456 2 2
Thermogladius_cellulolyticus_1633 2 2
Ignisphaera_aggregans_DSM_17230 2 2
Aeropyrum_pernix_K1 2 2
Ignicoccus_hospitalis_KIN4/I 3 3
Thermosphaera_aggregans_DSM_11486 2 2
Staphylothermus_hellenicus_DSM_12710 2 2
Staphylothermus_marinus_F1 2 2
Desulfurococcus_fermentans_DSM_16532 2 2
Desulfurococcus_kamchatkensis_1221n 2 2
Desulfurococcus_mucosus_DSM_2162 3 3
Metallosphaera_cuprina_Ar-4 2 2
Metallosphaera_sedula_DSM_5348 2 2
Acidianus_hospitalis_W1 2 2
Sulfolobus_tokodaii_str._7 2 2
Sulfolobus_islandicus_Y.N.15.51 2 2
Sulfolobus_solfataricus_P2 2 2
Sulfolobus_acidocaldarius_DSM_639 2 2
Thermofilum_sp._1910b 2 2
Thermofilum_pendens_Hrk_5 2 2
Vulcanisaeta_moutnovskia_768-28 2 2
Vulcanisaeta_distributa_DSM_14429 2 2
Caldivirga_maquilingensis_IC-167 2 2
Pyrobaculum_sp._1860 2 2
Pyrobaculum_calidifontis_JCM_11548 2 2
Pyrobaculum_arsenaticum_DSM_13514 2 2
Pyrobaculum_oguniense_TE7 2 2
Thermoproteus_neutrophilus_V24Sta 3 3
Pyrobaculum_aerophilum_str._IM2 3 3
Pyrobaculum_islandicum_DSM_4184 4 4
Thermoproteus_uzoniensis_768-20 2 2
Thermoproteus_tenax_Kra_1 2 2
halophilic_archaeon_DL31 2 2
Methanocella_arvoryzae_MRE50 2 2
Methanocella_conradii_HZ254 2 2
Methanocella_paludicola_SANAE 2 2
Methanosaeta_harundinacea_6Ac 2 2
Methanosaeta_thermophila_PT 2 2
Methanosaeta_concilii_GP6 2 2
Methanosalsum_zhilinae_DSM_4017 2 2
Methanohalobium_evestigatum_Z-7303 2 2
Methanococcoides_burtonii_DSM_6242 3 3
Methanosarcina_acetivorans_C2A 2 2
Methanosarcina_mazei_Go1 2 2
Methanosarcina_barkeri_str._Fusaro 2 2
Methanohalophilus_mahii_DSM_5219 2 2
Methanosphaerula_palustris_E1-9c 2 2
Methanoregula_boonei_6A8 2 2
Methanospirillum_hungatei_JF-1 2 2
Methanocorpusculum_labreanum_Z 2 2
Methanoplanus_petrolearius_DSM_11571 2 2
Methanoculleus_bourgensis_MS2 2 2
Methanoculleus_marisnigri_JR1 2 2
Methanopyrus_kandleri_AV19 3 3
Ferroglobus_placidus_DSM_10642 2 2
Archaeoglobus_profundus_DSM_5631 2 2
Archaeoglobus_veneficus_SNP6 2 2
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_sp._4557 2 2
Thermococcus_onnurineus_NA1 2 2
Thermococcus_kodakarensis_KOD1 4 4
Thermococcus_gammatolerans_EJ3 5 5
Thermococcus_sibiricus_MM_739 2 2
Thermococcus_barophilus_MP 2 2
Pyrococcus_sp._ST04 2 2
Pyrococcus_yayanosii_CH1 2 2
Pyrococcus_horikoshii_OT3 2 2
Pyrococcus_abyssi_GE5 2 2
Pyrococcus_furiosus_COM1 2 2
Thermoplasmatales_archaeon_BRNA1 2 2
Thermoplasma_volcanium_GSS1 2 2
Thermoplasma_acidophilum_DSM_1728 2 2
Picrophilus_torridus_DSM_9790 2 2
Salinarchaeum_sp._Harcht-Bsk1 2 2
Halopiger_xanaduensis_SH-6 3 3
Haloterrigena_turkmenica_DSM_5511 2 2
Natrinema_sp._J7-2 2 2
Natrialba_magadii_ATCC_43099 2 2
Halorubrum_lacusprofundi_ATCC_49239 2 2
Haloquadratum_walsbyi_DSM_16790 2 2
Halogeometricum_borinquense_DSM_11551 3 3
Haloferax_mediterranei_ATCC_33500 2 2
Haloferax_volcanii_DS2 2 2
Halomicrobium_mukohataei_DSM_12286 2 2
Halorhabdus_utahensis_DSM_12940 2 2
Natronomonas_pharaonis_DSM_2160 2 2
Haloarcula_hispanica_ATCC_33960 2 2
Haloarcula_marismortui_ATCC_43049 2 2
Halalkalicoccus_jeotgali_B3 2 2
Halobacterium_salinarum_R1 2 2
Halobacterium_sp._NRC-1 2 2
Methanotorris_igneus_Kol_5 2 2
Methanocaldococcus_sp._FS406-22 4 4
Methanocaldococcus_fervens_AG86 2 2
Methanocaldococcus_vulcanius_M7 3 3
methanocaldococcus_infernus_ME 3 3
Methanocaldococcus_jannaschii_DSM_2661 4 4
Methanothermococcus_okinawensis_IH1 2 2
Methanococcus_aeolicus_Nankai-3 2 2
Methanococcus_maripaludis_C5 2 2
Methanococcus_voltae_A3 2 2
Methanococcus_vannielii_SB 2 2
Methanothermus_fervidus_DSM_2088 2 2
Methanothermobacter_marburgensis_str._Marburg 2 2
Methanothermobacter_thermautotrophicus_str._Delta_H 2 2
Methanosphaera_stadtmanae_DSM_3091 2 2
Methanobrevibacter_sp._AbM4 2 2
Methanobrevibacter_ruminantium_M1 2 2
Methanobrevibacter_smithii_ATCC_35061 2 2
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 2 2
Aciduliprofundum_sp._MAR08-339 3 3
Aciduliprofundum_boonei_T469 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   34 34
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   11 11
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   10 10
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   9 9
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   8 8
Cryptococcus_neoformans_var._grubii_H99_ 7 7
Cryptococcus_neoformans_B-3501A_ 6 6
Cryptococcus_neoformans_JEC21_ 4 4
Paracoccidioides_brasiliensis_Pb01_ 7 7
Paracoccidioides_brasiliensis_Pb03_ 7 7
Coccidioides_posadasii_str._Silveira_ 7 7
Coccidioides_immitis_RMSCC_3703_ 6 6
Coccidioides_immitis_RMSCC_2394_ 7 7
Coccidioides_immitis_H538.4_ 7 7
Ajellomyces_dermatitidis_ER-3_ 7 7
Histoplasma_capsulatum_H143 7 7
Histoplasma_capsulatum_H88 7 7
Histoplasma_capsulatum_G186AR 7 7
Aspergillus_fumigatus_A1163_ 7 7
Candida_albicans_WO-1_ 6 6
Saccharomyces_cerevisiae_UC5 6 6
Saccharomyces_cerevisiae_PW5 7 7
Saccharomyces_cerevisiae_FL100 6 6
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 5 5
Saccharomyces_cerevisiae_CBS7960 6 6
Saccharomyces_cerevisiae_YJM269 6 6
Saccharomyces_cerevisiae_T7 7 7
Saccharomyces_cerevisiae_FostersB 6 6
Saccharomyces_cerevisiae_FostersO 5 5
Saccharomyces_cerevisiae_VL3 5 5
Saccharomyces_cerevisiae_Vin13 6 6
Saccharomyces_cerevisiae_LalvinQA23 5 5
Saccharomyces_cerevisiae_AWRI796 6 6
Saccharomyces_cerevisiae_Sigma1278b 7 7
Saccharomyces_cerevisiae_W303 6 6
Saccharomyces_cerevisiae_JAY291 7 7
Saccharomyces_cerevisiae_AWRI1631 5 5
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_M22 2 2
Saccharomyces_cerevisiae_T73 6 6
Saccharomyces_cerevisiae_CLIB215 6 6
Saccharomyces_cerevisiae_Y10 6 6
Saccharomyces_cerevisiae_YJM789_ 7 7
Saccharomyces_cerevisiae_YJM789 7 7
Saccharomyces_cerevisiae_RM11-1a 7 7
Saccharomyces_cerevisiae_RM11-1a_ 6 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   7 7
Schizosaccharomyces_pombe_972h-_ 6 6
Batrachochytrium_dendrobatidis_JEL423_ 10 9
Batrachochytrium_dendrobatidis_JAM81_ 9 9
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   9 9
Hordeum_vulgare_22   (Domesticated barley)   15 15
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   10 10
Trypanosoma_brucei_Lister_427_v4.1 9 9
Neospora_caninum_Nc-Liverpool_6.2 6 6
Plasmodium_falciparum_HB3_ 9 9
Plasmodium_falciparum_Dd2_ 7 7
Oscillatoria_nigro-viridis_PCC_7112 1 1
Cyanothece_sp._PCC_8801 1 1
Mycoplasma_ovis_str._Michigan 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1 1
Clostridium_pasteurianum_BC1 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Lactococcus_garvieae_Lg2 1 1
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y412MC52 1 1
Geobacillus_sp._Y412MC61 1 1
Bacillus_licheniformis_9945A 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 1 1
Staphylococcus_lugdunensis_N920143 1 1
Nonlabens_dokdonensis_DSW-6 1 1
Borrelia_valaisiana_VS116 1 1
Borrelia_burgdorferi_N40 1 1
Borrelia_burgdorferi_ZS7 1 1
Hydrogenobacter_thermophilus_TK-6 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Leisingera_methylohalidivorans_DSM_14336 1 1
Octadecabacter_antarcticus_307 1 1
Octadecabacter_arcticus_238 1 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_putida_W619 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 2 2
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 2 2
Caldisphaera_lagunensis_DSM_15908 2 2
Aeropyrum_camini_SY1_=_JCM_12091 2 2
Sulfolobus_islandicus_LAL14/1 2 2
Sulfolobus_islandicus_REY15A 2 2
Sulfolobus_islandicus_HVE10/4 2 2
Sulfolobus_islandicus_Y.G.57.14 2 2
Sulfolobus_islandicus_L.S.2.15 2 2
Sulfolobus_islandicus_M.16.27 2 2
Sulfolobus_islandicus_M.14.25 2 2
Sulfolobus_islandicus_M.16.4 2 2
Sulfolobus_islandicus_L.D.8.5 2 2
Sulfolobus_solfataricus_98/2 2 2
Sulfolobus_acidocaldarius_SUSAZ 2 2
Sulfolobus_acidocaldarius_Ron12/I 2 2
Sulfolobus_acidocaldarius_N8 2 2
Methanomethylovorans_hollandica_DSM_15978 2 2
Methanolobus_psychrophilus_R15 2 2
Methanosarcina_mazei_Tuc01 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 2 2
Archaeoglobus_sulfaticallidus_PM70-1 2 2
Thermococcus_sp._AM4 5 5
Thermococcus_sp._CL1 4 4
Thermococcus_litoralis_DSM_5473 2 2
Pyrococcus_sp._NA2 3 3
Pyrococcus_furiosus_DSM_3638 2 2
Candidatus_Methanomethylophilus_alvus_Mx1201 2 2
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 2 2
Ferroplasma_acidarmanus_fer1 2 2
Halovivax_ruber_XH-70 3 3
Natrinema_pellirubrum_DSM_15624 2 2
Natronococcus_occultus_SP4 2 2
Natronobacterium_gregoryi_SP2 2 2
Haloquadratum_walsbyi_C23 2 2
Halorhabdus_tiamatea_SARL4B 2 2
Natronomonas_moolapensis_8.8.11 2 2
Haloarcula_hispanica_N601 2 2
Methanococcus_maripaludis_X1 2 2
Methanococcus_maripaludis_C6 2 2
Methanococcus_maripaludis_C7 2 2
Methanococcus_maripaludis_S2 2 2
Methanobacterium_sp._SWAN-1 2 2

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   28 28
Pan_troglodytes_69_2.1.4   (Chimpanzee)   21 21
Gorilla_gorilla_69_3.1   (Western gorilla)   26 26
Pongo_abelii_69_2   (Sumatran orangutan)   24 24
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   21 21
Macaca_mulatta_69_1   (Rhesus monkey)   26 26
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   22 22
Otolemur_garnettii_69_3   (Small-eared galago)   27 27
Microcebus_murinus_69_1   (Gray mouse lemur)   21 21
Rattus_norvegicus_69_3.4   (Norway rat)   16 16
Mus_musculus_69_38   (House mouse)   20 20
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   15 15
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   21 21
Cavia_porcellus_69_3   (Domestic guinea pig)   18 18
Oryctolagus_cuniculus_69_2   (Rabbit)   27 27
Ochotona_princeps_69   (American pika)   20 20
Tupaia_belangeri_69   (Northern tree shrew)   15 15
Sus_scrofa_69_10.2   (Pig)   21 21
Bos_taurus_69_3.1   (Cattle)   20 20
Vicugna_pacos_69_1   (Alpaca)   6 6
Tursiops_truncatus_69_1   (Bottlenose dolphin)   17 17
Mustela_putorius_furo_69_1.0   (Domestic ferret)   25 25
Ailuropoda_melanoleuca_69_1   (Giant panda)   23 23
Canis_familiaris_69_3.1   (Dog)   25 25
Felis_catus_69   (Domestic cat)   18 18
Equus_caballus_69_2   (Horse)   23 23
Myotis_lucifugus_69_2.0   (Little brown bat)   27 27
Pteropus_vampyrus_69_1   (Large flying fox)   19 19
Sorex_araneus_69_1   (European shrew)   12 12
Erinaceus_europaeus_69   (Western European hedgehog)   17 17
Procavia_capensis_69_1   (Cape rock hyrax)   15 15
Loxodonta_africana_69_3   (African savanna elephant)   22 22
Echinops_telfairi_69   (Small Madagascar hedgehog)   13 13
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   13 13
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 8
Macropus_eugenii_69_1.0   (Tammar wallaby)   20 20
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   26 26
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   18 18
Ornithorhynchus_anatinus_69_5   (Platypus)   18 18
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_69_2   (Turkey)   18 18
Gallus_gallus_69_2   (Chicken)   17 17
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   12 12
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   15 15
Anolis_carolinensis_69_2.0   (Green anole)   15 15
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   13 13
Latimeria_chalumnae_69_1   (Coelacanth)   12 12
Gadus_morhua_69_1   (Atlantic cod)   12 12
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   9 9
Takifugu_rubripes_69_4   (Torafugu)   16 16
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   12 12
Oryzias_latipes_69_1   (Japanese medaka)   14 14
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   12 12
Oreochromis_niloticus_69_1.0   (Nile tilapia)   16 16
Danio_rerio_69_9   (Zebrafish)   15 15
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_69   (Vase tunicate)   9 9
Drosophila_melanogaster_69_5   (Fruit fly)   10 10
Caenorhabditis_elegans_69_215   (Roundworm)   8 8
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   7 7
Arabidopsis_thaliana_10   (Thale cress)   9 9

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   94 94
Homo_sapiens__(NCBI_version)   (Human)   39 39
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   19 19
Heliconius_numata__(Incomplete) 11 11
Loa_loa_v3.3_(Request)   (Eye worm)   8 8
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   8 8
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   7 7
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   6 6
Lotus_japonicus__(Early_assembly) 6 6
Malus_x_domestica_(Duplicate)   (Apple)   21 21
Ricinus_communis__(Early_assembly)   (Castor bean)   9 9
Nicotiana_benthamiana_0.4.4_(Early_draft) 26 25
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   8 8
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   8 8
Phoenix_dactylifera__(Early_draft)   (Date palm)   6 6
NCBI_plasmid_sequences_(Plasmids) 8 8
TargetDB__(Targets) 96 96
Protein_Data_Bank_(all_PDB_sequenc) 10 10
Core_Eukaryotic_Genes_458_(CEGMA) 18 18
Protozoadb_2010_08_(Protozoadb) 239 239
PDB_chains_(SCOP_1.75)_(PDB) 3 3
STRING_v9.0.5_(STRING) 1357 1355
NCBI_2017_08_genome 14196 14179
Uniprot_2018_03_genome 16961 16925
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 21 21

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