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Domain combinations for Spectrin repeat superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Spectrin repeat domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   1347 188
Pan_troglodytes_76_2.1.4   (Chimpanzee)   260 32
Gorilla_gorilla_76_3.1   (Western gorilla)   483 54
Pongo_abelii_76_2   (Sumatran orangutan)   310 36
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   266 33
Papio_anubis_76   (Olive baboon)   276 35
Macaca_mulatta_76_1   (Rhesus monkey)   743 89
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   834 100
Otolemur_garnettii_76_3   (Small-eared galago)   324 37
Microcebus_murinus_76_1   (Gray mouse lemur)   241 28
Rattus_norvegicus_76_5.0   (Norway rat)   406 50
Mus_musculus_76_38   (House mouse)   985 134
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   259 30
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   300 39
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   310 37
Cavia_porcellus_76_3   (Domestic guinea pig)   324 38
Oryctolagus_cuniculus_76_2   (Rabbit)   301 38
Ochotona_princeps_76   (American pika)   249 27
Tupaia_belangeri_76   (Northern tree shrew)   240 28
Sus_scrofa_76_10.2   (Pig)   279 49
Bos_taurus_76_3.1   (Cattle)   335 37
Ovis_aries_76_3.1   (Sheep)   309 40
Vicugna_pacos_76_1   (Alpaca)   190 20
Tursiops_truncatus_76_1   (Bottlenose dolphin)   294 32
Mustela_putorius_furo_76_1.0   (Domestic ferret)   323 34
Ailuropoda_melanoleuca_76_1   (Giant panda)   448 46
Canis_familiaris_76_3.1   (Dog)   503 57
Felis_catus_76_6.2   (Domestic cat)   320 52
Equus_caballus_76_2   (Horse)   738 71
Myotis_lucifugus_76_2.0   (Little brown bat)   255 38
Pteropus_vampyrus_76_1   (Large flying fox)   289 32
Sorex_araneus_76_1   (European shrew)   190 23
Erinaceus_europaeus_76   (Western European hedgehog)   184 20
Procavia_capensis_76_1   (Cape rock hyrax)   258 31
Loxodonta_africana_76_3   (African savanna elephant)   421 53
Echinops_telfairi_76   (Small Madagascar hedgehog)   228 29
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   391 58
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   165 18
Macropus_eugenii_76_1.0   (Tammar wallaby)   248 27
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   355 47
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   360 39
Ornithorhynchus_anatinus_76_5   (Platypus)   341 71
Saccoglossus_kowalevskii_v3.0 2079 67
Petromyzon_marinus_76_7.0   (Sea lamprey)   172 32
Meleagris_gallopavo_76_2   (Turkey)   299 37
Gallus_gallus_76_4   (Chicken)   332 35
Anas_platyrhynchos_76_1.0   (Mallard)   292 36
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   264 34
Ficedula_albicollis_76_1.0   (Collared flycatcher)   291 32
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   266 39
Anolis_carolinensis_76_2.0   (Green anole)   299 35
Xenopus_laevis_   (African clawed frog)   101 33
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   313 41
Latimeria_chalumnae_76_1   (Coelacanth)   352 47
Lepisosteus_oculatus_76   (Spotted gar)   489 49
Gadus_morhua_76_1   (Atlantic cod)   308 39
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   397 56
Takifugu_rubripes_76_4   (Torafugu)   1586 184
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   453 55
Oryzias_latipes_76_1   (Japanese medaka)   351 49
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   349 45
Poecilia_formosa_76   (Amazon molly)   366 42
Oreochromis_niloticus_76_1.0   (Nile tilapia)   456 53
Astyanax_mexicanus_76   (Mexican tetra)   398 58
Danio_rerio_76_9   (Zebrafish)   590 93
Oikopleura_dioica 51 13
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   180 28
Ciona_intestinalis_76   (Vase tunicate)   69 11
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   287 42
Adineta_vaga 157 43
Octopus_bimaculoides_280 368 41
Crassostrea_gigas_22   (Pacific oyster)   185 21
Lottia_gigantea_   (Owl limpet)   185 16
Helobdella_robusta_ 96 16
Capitella_sp._I_ 182 19
Danaus_plexippus_OGS1.0   (Monarch butterfly)   151 21
Heliconius_melpomene_   (Postman butterfly)   125 15
Bombyx_mori_   (Domestic silkworm)   132 44
Nasonia_vitripennis_   (Jewel wasp)   131 8
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   389 45
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   159 18
Linepithema_humile_v1.1   (Argentine ant)   150 23
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   157 24
Solenopsis_invicta_v.2.2.3   (Red fire ant)   131 22
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   153 13
Atta_cephalotes_v1.1 153 20
Camponotus_floridanus_v3.3   (Florida carpenter ant)   172 16
Lucilia_cuprina   (Australian sheep blowfly)   149 15
Drosophila_grimshawi_1.3 161 14
Drosophila_willistoni_1.3 160 13
Drosophila_pseudoobscura_2.13 152 13
Drosophila_persimilis_1.3 114 19
Drosophila_suzukii 150 12
Drosophila_yakuba_1.3 160 12
Drosophila_simulans_1.3 80 16
Drosophila_sechellia_1.3 140 14
Drosophila_melanogaster_76_5   (Fruit fly)   1379 76
Drosophila_erecta_1.3 158 12
Drosophila_ananassae_1.3 157 11
Drosophila_virilis_1.2 125 14
Drosophila_mojavensis_1.3 158 15
Megaselia_scalaris_22 92 14
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   129 13
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   120 18
Anopheles_darlingi_22   (American malaria mosquito)   91 11
Anopheles_gambiae_49_3j   (African malaria mosquito)   140 11
Tribolium_castaneum_3.0   (Red flour beetle)   158 12
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   163 16
Acyrthosiphon_pisum_   (Pea aphid)   147 16
Rhodnius_prolixus_22 130 18
Daphnia_pulex_   (Common water flea)   197 26
Strigamia_maritima_22 161 13
Sarcoptes_scabiei 112 9
Tetranychus_urticae_   (Two-spotted spider mite)   91 23
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   56 11
Pristionchus_pacificus_ 91 24
Meloidogyne_incognita_   (Southern root-knot nematode)   48 12
Meloidogyne_hapla_ 33 8
Onchocerca_volvulus_22 100 14
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   149 17
Caenorhabditis_japonica_ 107 12
Caenorhabditis_brenneri_ 135 19
Caenorhabditis_remanei_ 99 19
Caenorhabditis_elegans_76_235   (Roundworm)   328 33
Caenorhabditis_briggsae_2 91 11
Trichinella_spiralis_22 102 13
Hymenolepis_microstoma_ 93 13
Echinococcus_multilocularis_ 94 14
Echinococcus_granulosus_ 98 12
Taenia_solium_   (Pork tapeworm)   84 16
Schistosoma_mansoni_ 105 22
Mnemiopsis_leidyi   (Sea walnut)   61 15
Thelohanellus_kitauei 3 1
Acropora_digitifera_v1.0 185 47
Nematostella_vectensis_1.0   (Starlet sea anemone)   134 26
Hydra_vulgaris 81 17
Amphimedon_queenslandica 94 17
Trichoplax_adhaerens_ 135 14
Proterospongia_sp._ATCC_50818_ 79 12
Monosiga_brevicollis_ 52 9
Sphaeroforma_arctica_JP610_ 4 1
Capsaspora_owczarzaki_ATCC_30864_ 20 3
Conidiobolus_coronatus_NRRL28638_v1.0 3 2
Mortierella_verticillata_NRRL_6337_ 2 1
Phycomyces_blakesleeanus_ 2 1
Rhizopus_oryzae_RA_99-880_ 6 4
Mucor_circinelloides_ 4 2
Rhizomucor_miehei_CAU432_ 8 5
Sporisorium_reilianum_22 2 1
Ustilago_maydis_ 2 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 2 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 4 3
Piloderma_croceum_F_1598_v1.0 3 2
Serpula_lacrymans_var._lacrymans_S7.9_ 2 1
Coniophora_puteana 2 1
Hydnomerulius_pinastri_v2.0 2 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 1
Pisolithus_microcarpus_441_v1.0 2 1
Pisolithus_tinctorius_Marx_270_v1.0 2 1
Scleroderma_citrinum_Foug_A_v1.0 3 2
Coprinopsis_cinerea_okayama7_130_v3 2 1
Pleurotus_ostreatus_   (Oyster mushroom)   2 1
Amanita_thiersii_Skay4041_v1.0 2 1
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 1
Galerina_marginata_v1.0 2 1
Hebeloma_cylindrosporum_h7_v2.0 2 1
Laccaria_bicolor_S238N-H82_ 2 1
Agaricus_bisporus_var._bisporus_ 3 2
Schizophyllum_commune_ 2 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 1
Heterobasidion_annosum_ 2 1
Gloeophyllum_trabeumv1.0 2 1
Punctularia_strigosozonata_v1.0 2 1
Sebacina_vermifera_MAFF_305830_v1.0 2 1
Fomitiporia_mediterranea_v1.0 2 1
Tulasnella_calospora_AL13/4D_v1.0 4 3
Postia_placenta_ 3 2
Wolfiporia_cocos_MD-104_SS10__v1.0 2 1
Fomitopsis_pinicolav1.0 2 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 1
Phanerochaete_chrysosporium_RP-78_2.1 2 1
Dichomitus_squalens 2 1
Trametes_versicolor_v1.0 2 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 2 1
Apiospora_montagnei_NRRL_25634_v1.0 2 1
Magnaporthe_poae_ATCC_64411_22 2 1
Magnaporthe_grisea_70-15_ 3 2
Podospora_anserina_ 2 1
Sporotrichum_thermophile_ATCC_42464_ 3 2
Thielavia_terrestris_NRRL_8126_ 2 1
Chaetomium_globosum_CBS_148.51_ 2 1
Neurospora_tetrasperma_ 2 1
Neurospora_discreta_FGSC_8579_ 2 1
Neurospora_crassa_OR74A_ 2 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 1
Verticillium_albo-atrum_VaMs.102_ 2 1
Verticillium_dahliae_VdLs.17_ 2 1
Acremonium_alcalophilumv_1.0 2 1
Glomerella_graminicola_22 2 1
Fusarium_graminearum_ 3 2
Nectria_haematococca_mpVI_ 2 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 3 2
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 2 1
Trichoderma_atroviride_ 2 1
Trichoderma_citrinoviride_v1.0 2 1
Trichoderma_reesei_1.2 3 2
Trichoderma_virens_Gv29-8_ 2 1
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 1
Trichoderma_harzianum_CBS_226.95_v1.0 2 1
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 1
Botrytis_cinerea_B05.10_ 3 2
Sclerotinia_sclerotiorum_ 2 1
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 2 1
Leptosphaeria_maculans_22 2 1
Setosphaeria_turcica_v1.0 2 1
Cochliobolus_miyabeanus_ATCC_44560_v1.0 2 1
Cochliobolus_victoriae_FI3_v1.0 2 1
Cochliobolus_carbonum_26-R-13_v1.0 2 1
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 2
Alternaria_brassicicola_ 2 1
Cochliobolus_lunatus_m118_v2.0 2 1
Pyrenophora_teres_f._teres_22 2 1
Pyrenophora_tritici-repentis_ 2 1
Stagonospora_nodorum_ 2 1
Mycosphaerella_graminicola_IPO323_ 2 1
Zasmidium_cellare_ATCC_36951_v1.0 4 3
Dothistroma_septosporum 3 2
Septoria_musiva_v1.0 2 1
Mycosphaerella_fijiensis_CIRAD86_ 2 1
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 1
Paracoccidioides_brasiliensis_Pb18_ 2 1
Coccidioides_posadasii_RMSCC_3488_ 2 1
Coccidioides_immitis_RS_ 2 1
Ajellomyces_dermatitidis_SLH14081_ 2 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 1
Microsporum_canis_CBS_113480_ 2 1
Trichophyton_equinum_CBS_127.97_ 2 1
Trichophyton_verrucosum_HKI_0517_ 2 1
Arthroderma_benhamiae_CBS_112371_ 2 1
Trichophyton_tonsurans_CBS_112818_ 2 1
Trichophyton_rubrum_CBS_118892_ 2 1
Uncinocarpus_reesii_1704_ 2 1
Aspergillus_zonatus_v1.0 2 1
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 1
Penicillium_chrysogenum_v1.0 2 1
Aspergillus_acidus_v1.0 2 1
Aspergillus_fumigatus_Af293 2 1
Aspergillus_brasiliensis_v1.0 2 1
Aspergillus_nidulans_FGSC_A4_ 2 1
Aspergillus_sydowii_v1.0 2 1
Aspergillus_versicolor_v1.0 2 1
Aspergillus_glaucus 2 1
Aspergillus_carbonarius_ITEM_5010_ 2 1
Neosartorya_fischeri_NRRL_181_ 2 1
Aspergillus_terreus_NIH2624_ 2 1
Aspergillus_tubingensis_v1.0 2 1
Aspergillus_wentii_v1.0 2 1
Aspergillus_oryzae_RIB40_ 2 1
Aspergillus_niger_22 2 1
Aspergillus_niger_ATCC_1015_ 2 1
Aspergillus_flavus_NRRL3357_ 2 1
Aspergillus_clavatus_NRRL_1_ 2 1
Penicillium_marneffei_ATCC_18224_ 2 1
Tuber_melanosporum_Mel28_22 2 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   2 1
Hansenula_polymorpha_v2.0 1 1
Yarrowia_lipolytica_CLIB122 2 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Catenaria_anguillulae_PL171_v1.0 1 1
Allomyces_macrogynus_ATCC_38327_ 5 3
Spizellomyces_punctatus_DAOM_BR117_ 2 1
Dictyostelium_discoideum 4 1
Dictyostelium_purpureum_ 4 1
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 1 1
Entamoeba_histolytica_1 2 1
Capsella_rubella_v183 1 1
Phaseolus_vulgaris_v186   (French bean)   1 1
Solanum_tuberosum_   (Potato)   1 1
Triticum_aestivum_22   (Bread wheat)   1 1
Oryza_meridionalis_22 1 1
Panicum_virgatum_v202   (Switchgrass)   2 2
Amborella_trichopoda_22 1 1
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 6 1
Bigelowiella_natans_CCMP2755_22 1 1
Trypanosoma_vivax_ 1 1
Aureococcus_anophagefferens_ 1 1
Albugo_laibachii_22 1 1
Pythium_iwayamai_DAOM_BR242034_22 1 1
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_aphanidermatum_DAOM_BR444_22 2 1
Pythium_irregulare_DAOM_BR486_22 1 1
Pythium_vexans_DAOM_BR484_22 2 1
Phytophthora_ramorum_1.1   (Sudden oak death agent)   1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_infestans_T30-4_ 1 1
Phytophthora_capsici_ 1 1
Hyaloperonospora_arabidopsidis_22 1 1
Perkinsus_marinus_ATCC_50983_ 1 1
Paramecium_tetraurelia_ 1 1
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Naegleria_gruberi_ 3 2
Trichomonas_vaginalis_ 2 2
Guillardia_theta_CCMP2712_v1.0_ 1 1
Emiliania_huxleyi_CCMP1516_ 3 3
Synechococcus_sp._PCC_7502 1 1
Halothece_sp._PCC_7418 1 1
Saccharomonospora_viridis_DSM_43017 1 1
Herpetosiphon_aurantiacus_DSM_785 1 1
Chloroflexus_aggregans_DSM_9485 1 1
Truepera_radiovictrix_DSM_17093 1 1
Meiothermus_ruber_DSM_1279 1 1
Clostridium_thermocellum_ATCC_27405 1 1
Enterococcus_faecalis_62 1 1
Pediococcus_pentosaceus_ATCC_25745 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_anthracis_str._A0248 1 1
Bacillus_cellulosilyticus_DSM_2522 2 2
Prosthecochloris_aestuarii_DSM_271 1 1
Niastella_koreensis_GR20-10 1 1
Thermosipho_africanus_TCF52B 1 1
Dictyoglomus_turgidum_DSM_6724 1 1
Burkholderia_sp._CCGE1002 1 1
Burkholderia_vietnamiensis_G4 1 1
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Xanthomonas_campestris_pv._campestris_str._B100 1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Shigella_flexneri_5_str._8401 1 1
Shigella_dysenteriae_Sd197 1 1
Fervidicoccus_fontis_Kam940 1 1
Thermofilum_sp._1910b 1 1
Halalkalicoccus_jeotgali_B3 2 2

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   285 54
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   914 52
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   193 16
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   98 11
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   240 26
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 2 1
Coccidioides_posadasii_str._Silveira_ 2 1
Coccidioides_immitis_RMSCC_3703_ 2 1
Coccidioides_immitis_RMSCC_2394_ 2 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 2 1
Histoplasma_capsulatum_H143 2 1
Histoplasma_capsulatum_H88 2 1
Histoplasma_capsulatum_G186AR 2 1
Aspergillus_fumigatus_A1163_ 2 1
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JEL423_ 2 1
Batrachochytrium_dendrobatidis_JAM81_ 2 1
Thermus_thermophilus_HB8 1 1
Clostridium_thermocellum_DSM_1313 1 1
Coprococcus_catus_GD/7 1 1
Enterococcus_faecalis_D32 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Prevotella_sp._oral_taxon_299_str._F0039 1 1
Variovorax_paradoxus_B4 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 1 1
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 1 1
Shigella_flexneri_2002017 3 3
Shigella_flexneri_2a_str._2457T 3 3
Shigella_dysenteriae_1617 1 1
Pseudomonas_stutzeri_DSM_10701 1 1
Methylophaga_sp._JAM7 1 1
Aeropyrum_camini_SY1_=_JCM_12091 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   400 38
Pan_troglodytes_69_2.1.4   (Chimpanzee)   260 32
Gorilla_gorilla_69_3.1   (Western gorilla)   282 36
Pongo_abelii_69_2   (Sumatran orangutan)   310 36
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   245 32
Macaca_mulatta_69_1   (Rhesus monkey)   304 35
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   310 33
Otolemur_garnettii_69_3   (Small-eared galago)   312 34
Microcebus_murinus_69_1   (Gray mouse lemur)   241 28
Rattus_norvegicus_69_3.4   (Norway rat)   297 34
Mus_musculus_69_38   (House mouse)   266 34
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   259 30
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   288 33
Cavia_porcellus_69_3   (Domestic guinea pig)   309 36
Oryctolagus_cuniculus_69_2   (Rabbit)   257 39
Ochotona_princeps_69   (American pika)   249 27
Tupaia_belangeri_69   (Northern tree shrew)   240 28
Sus_scrofa_69_10.2   (Pig)   232 39
Bos_taurus_69_3.1   (Cattle)   304 34
Vicugna_pacos_69_1   (Alpaca)   190 20
Tursiops_truncatus_69_1   (Bottlenose dolphin)   294 32
Mustela_putorius_furo_69_1.0   (Domestic ferret)   323 34
Ailuropoda_melanoleuca_69_1   (Giant panda)   309 36
Canis_familiaris_69_3.1   (Dog)   316 35
Felis_catus_69   (Domestic cat)   181 28
Equus_caballus_69_2   (Horse)   323 35
Myotis_lucifugus_69_2.0   (Little brown bat)   255 38
Pteropus_vampyrus_69_1   (Large flying fox)   289 32
Sorex_araneus_69_1   (European shrew)   190 23
Erinaceus_europaeus_69   (Western European hedgehog)   184 20
Procavia_capensis_69_1   (Cape rock hyrax)   258 31
Loxodonta_africana_69_3   (African savanna elephant)   262 34
Echinops_telfairi_69   (Small Madagascar hedgehog)   228 29
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   205 25
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   165 18
Macropus_eugenii_69_1.0   (Tammar wallaby)   248 27
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   250 34
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   325 34
Ornithorhynchus_anatinus_69_5   (Platypus)   306 66
Petromyzon_marinus_69_7.0   (Sea lamprey)   157 28
Meleagris_gallopavo_69_2   (Turkey)   262 28
Gallus_gallus_69_2   (Chicken)   284 29
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   257 33
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   233 33
Anolis_carolinensis_69_2.0   (Green anole)   291 39
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   289 33
Latimeria_chalumnae_69_1   (Coelacanth)   273 37
Gadus_morhua_69_1   (Atlantic cod)   308 39
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   300 41
Takifugu_rubripes_69_4   (Torafugu)   381 43
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   372 42
Oryzias_latipes_69_1   (Japanese medaka)   317 38
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   349 45
Oreochromis_niloticus_69_1.0   (Nile tilapia)   373 40
Danio_rerio_69_9   (Zebrafish)   340 50
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   24 7
Ciona_intestinalis_69   (Vase tunicate)   65 10
Drosophila_melanogaster_69_5   (Fruit fly)   124 10
Caenorhabditis_elegans_69_215   (Roundworm)   103 11

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1579 208
Homo_sapiens__(NCBI_version)   (Human)   646 76
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   307 33
Heliconius_numata__(Incomplete) 12 9
Loa_loa_v3.3_(Request)   (Eye worm)   109 13
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   106 42
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   97 14
Moniliophthora_perniciosa_FA553__(Genome_survey) 2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 1 1
NCBI_plasmid_sequences_(Plasmids) 7 7
STRING_v9.0.5_(STRING) 10877 1400
Uniprot_2018_03_genome 159518 21102
NCBI_2017_08_genome 387404 34306
Protozoadb_2010_08_(Protozoadb) 14 12
PDB_chains_(SCOP_1.75)_(PDB) 22 11
Protein_Data_Bank_(all_PDB_sequenc) 131 69
TargetDB__(Targets) 200 79
UniProt__viral_sequences_(Viral) 1 1
NCBI_viral_sequences_(Viral) 1 1
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 213 213

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