SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Insect pheromone/odorant-binding proteins superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Insect pheromone/odorant-binding proteins domain in that genome.

Complete genomes
Genome     Number   Proteins
Danaus_plexippus_OGS1.0   (Monarch butterfly)   34 33
Heliconius_melpomene_   (Postman butterfly)   48 48
Bombyx_mori_   (Domestic silkworm)   26 26
Nasonia_vitripennis_   (Jewel wasp)   44 42
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   14 14
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   11 11
Linepithema_humile_v1.1   (Argentine ant)   14 14
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   13 13
Solenopsis_invicta_v.2.2.3   (Red fire ant)   3 3
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   9 8
Atta_cephalotes_v1.1 11 10
Camponotus_floridanus_v3.3   (Florida carpenter ant)   8 8
Lucilia_cuprina   (Australian sheep blowfly)   59 46
Drosophila_grimshawi_1.3 49 47
Drosophila_willistoni_1.3 46 44
Drosophila_pseudoobscura_2.13 38 36
Drosophila_persimilis_1.3 38 36
Drosophila_suzukii 52 40
Drosophila_yakuba_1.3 46 44
Drosophila_simulans_1.3 43 41
Drosophila_sechellia_1.3 46 44
Drosophila_melanogaster_76_5   (Fruit fly)   57 55
Drosophila_erecta_1.3 43 41
Drosophila_ananassae_1.3 42 40
Drosophila_virilis_1.2 36 34
Drosophila_mojavensis_1.3 35 34
Megaselia_scalaris_22 29 29
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   149 119
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   148 126
Anopheles_darlingi_22   (American malaria mosquito)   41 33
Anopheles_gambiae_49_3j   (African malaria mosquito)   91 73
Tribolium_castaneum_3.0   (Red flour beetle)   51 51
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   5 5
Acyrthosiphon_pisum_   (Pea aphid)   8 8
Rhodnius_prolixus_22 27 27
Strigamia_maritima_22 5 5
Tetranychus_urticae_   (Two-spotted spider mite)   1 1
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   57 55
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   93 74

Longest transcript per gene
Genome     Number   Proteins
Drosophila_melanogaster_69_5   (Fruit fly)   47 45

Others
Genome     Number   Proteins
Heliconius_numata__(Incomplete) 14 14
PDB_chains_(SCOP_1.75)_(PDB) 10 10
Protein_Data_Bank_(all_PDB_sequenc) 184 174
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 410 410
STRING_v9.0.5_(STRING) 788 702
NCBI_2017_08_genome 4296 4044
Uniprot_2018_03_genome 8043 7412
TargetDB__(Targets) 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]