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Domain combinations for Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily in groups of genomes

Network of domain occurrence in all genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin domain in that genome.

Complete genomes
Genome     Number   Proteins
Macaca_mulatta_76_1   (Rhesus monkey)   1 1
Solenopsis_invicta_v.2.2.3   (Red fire ant)   1 1
Selaginella_moellendorffii_ 61 61
Pinus_taeda   (Loblolly pine)   132 125
Picea_abies   (Norway spruce)   100 100
Eucalyptus_grandis_v201   (Rose gum)   93 93
Theobroma_cacao_B97-61/B2_v1   (Cacao)   92 90
Gossypium_raimondii_v221 202 197
Citrus_clementina_v165 110 110
Citrus_sinensis_v154   (Sweet orange)   79 79
Thellungiella_halophila_v173 119 119
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   167 166
Capsella_rubella_v183 141 140
Arabidopsis_lyrata_   (Lyrate rockcress)   118 115
Arabidopsis_thaliana_10   (Thale cress)   148 147
Carica_papaya_   (Papaya)   72 70
Medicago_truncatula_   (Barrel medic)   139 138
Phaseolus_vulgaris_v186   (French bean)   113 113
Glycine_max_v109   (Soybean)   182 182
Cucumis_sativus_v122   (Cucumber)   62 62
Fragaria_vesca_   (Wild strawberry)   68 68
Malus_domestica_v196   (Apple)   139 134
Prunus_persica_v139   (Peach)   71 71
Linum_usitatissimum_v200   (Flax)   177 177
Manihot_esculenta_v147   (Cassava)   110 110
Populus_trichocarpa_v156   (Black cottonwood)   113 113
Vitis_vinifera_   (Wine grape)   49 49
Mimulus_guttatus_v140   (Spotted monkey flower)   107 107
Solanum_lycopersicum_v.2.3   (Tomato)   112 111
Solanum_tuberosum_   (Potato)   145 144
Actinidia_chinensis_Hongyang_ 75 74
Aquilegia_coerulea_v195 113 113
Triticum_urartu_22 137 131
Triticum_aestivum_22   (Bread wheat)   336 335
Aegilops_tauschii_22 150 146
Brachypodium_distachyon_   (Stiff brome)   127 127
Oryza_barthii_22   (African wild rice)   136 127
Oryza_meridionalis_22 126 114
Oryza_glumaepatula_22 141 134
Oryza_glaberrima   (African rice)   119 119
Oryza_punctata_22 168 149
Oryza_nivara_22 156 150
Oryza_brachyantha_22   (Malo sina)   103 99
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   196 196
Oryza_sativa_v193   (Rice)   190 190
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   60 60
Panicum_virgatum_v202   (Switchgrass)   247 246
Setaria_italica_v164   (Foxtail millet)   144 144
Zea_mays_subsp._mays_   (Maize)   150 150
Zea_mays_v181   (Maize)   155 155
Sorghum_bicolor_   (Sorghum)   123 122
Musa_balbisiana   (Balbis banana)   81 81
Musa_acuminata_22   (Wild Malaysian banana)   48 48
Amborella_trichopoda_22 77 77
Physcomitrella_patens 43 41
Chlorella_variabilis_sp._NC64A_ 1 1
Micromonas_sp._RCC299_ 1 1

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Strains
Genome     Number   Proteins
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   84 83
Hordeum_vulgare_22   (Domesticated barley)   111 110
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   157 154

Longest transcript per gene
Genome     Number   Proteins
Macaca_mulatta_69_1   (Rhesus monkey)   1 1
Arabidopsis_thaliana_10   (Thale cress)   129 128

Others
Genome     Number   Proteins
Picea_sitchensis__(Incomplete)   (Sitka spruce)   24 24
Lotus_japonicus__(Early_assembly) 63 62
Malus_x_domestica_(Duplicate)   (Apple)   139 134
Ricinus_communis__(Early_assembly)   (Castor bean)   94 91
Nicotiana_benthamiana_0.4.4_(Early_draft) 174 165
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   112 111
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   112 111
Phoenix_dactylifera__(Early_draft)   (Date palm)   13 12
PDB_chains_(SCOP_1.75)_(PDB) 17 17
STRING_v9.0.5_(STRING) 1007 995
NCBI_2017_08_genome 8745 8691
Uniprot_2018_03_genome 18651 17985
Protein_Data_Bank_(all_PDB_sequenc) 69 69
TargetDB__(Targets) 9 9
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 188 188

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