SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Regulator of G-protein signaling, RGS superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Regulator of G-protein signaling, RGS domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   163 145
Pan_troglodytes_76_2.1.4   (Chimpanzee)   42 37
Gorilla_gorilla_76_3.1   (Western gorilla)   48 47
Pongo_abelii_76_2   (Sumatran orangutan)   47 42
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   48 43
Papio_anubis_76   (Olive baboon)   52 47
Macaca_mulatta_76_1   (Rhesus monkey)   69 64
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   99 93
Otolemur_garnettii_76_3   (Small-eared galago)   45 40
Microcebus_murinus_76_1   (Gray mouse lemur)   30 30
Rattus_norvegicus_76_5.0   (Norway rat)   42 37
Mus_musculus_76_38   (House mouse)   128 116
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   44 36
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   46 41
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   37 34
Cavia_porcellus_76_3   (Domestic guinea pig)   40 35
Oryctolagus_cuniculus_76_2   (Rabbit)   39 35
Ochotona_princeps_76   (American pika)   41 39
Tupaia_belangeri_76   (Northern tree shrew)   31 29
Sus_scrofa_76_10.2   (Pig)   37 33
Bos_taurus_76_3.1   (Cattle)   52 46
Ovis_aries_76_3.1   (Sheep)   49 42
Vicugna_pacos_76_1   (Alpaca)   27 24
Tursiops_truncatus_76_1   (Bottlenose dolphin)   39 35
Mustela_putorius_furo_76_1.0   (Domestic ferret)   43 37
Ailuropoda_melanoleuca_76_1   (Giant panda)   44 40
Canis_familiaris_76_3.1   (Dog)   59 52
Felis_catus_76_6.2   (Domestic cat)   41 37
Equus_caballus_76_2   (Horse)   52 47
Myotis_lucifugus_76_2.0   (Little brown bat)   49 41
Pteropus_vampyrus_76_1   (Large flying fox)   42 37
Sorex_araneus_76_1   (European shrew)   18 17
Erinaceus_europaeus_76   (Western European hedgehog)   33 28
Procavia_capensis_76_1   (Cape rock hyrax)   41 37
Loxodonta_africana_76_3   (African savanna elephant)   50 48
Echinops_telfairi_76   (Small Madagascar hedgehog)   36 33
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   50 44
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   29 26
Macropus_eugenii_76_1.0   (Tammar wallaby)   38 36
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   52 43
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   47 41
Ornithorhynchus_anatinus_76_5   (Platypus)   45 39
Saccoglossus_kowalevskii_v3.0 58 33
Petromyzon_marinus_76_7.0   (Sea lamprey)   26 26
Meleagris_gallopavo_76_2   (Turkey)   49 42
Gallus_gallus_76_4   (Chicken)   47 42
Anas_platyrhynchos_76_1.0   (Mallard)   39 37
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   32 30
Ficedula_albicollis_76_1.0   (Collared flycatcher)   40 36
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   53 44
Anolis_carolinensis_76_2.0   (Green anole)   41 37
Xenopus_laevis_   (African clawed frog)   82 80
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   48 44
Latimeria_chalumnae_76_1   (Coelacanth)   59 51
Lepisosteus_oculatus_76   (Spotted gar)   59 52
Gadus_morhua_76_1   (Atlantic cod)   63 61
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   63 61
Takifugu_rubripes_76_4   (Torafugu)   193 189
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   67 66
Oryzias_latipes_76_1   (Japanese medaka)   66 64
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   57 53
Poecilia_formosa_76   (Amazon molly)   54 50
Oreochromis_niloticus_76_1.0   (Nile tilapia)   69 66
Astyanax_mexicanus_76   (Mexican tetra)   59 56
Danio_rerio_76_9   (Zebrafish)   82 80
Oikopleura_dioica 11 10
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   45 39
Ciona_intestinalis_76   (Vase tunicate)   30 27
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   28 22
Adineta_vaga 46 43
Octopus_bimaculoides_280 30 28
Crassostrea_gigas_22   (Pacific oyster)   25 16
Lottia_gigantea_   (Owl limpet)   21 14
Helobdella_robusta_ 20 18
Capitella_sp._I_ 24 17
Danaus_plexippus_OGS1.0   (Monarch butterfly)   13 12
Heliconius_melpomene_   (Postman butterfly)   12 11
Bombyx_mori_   (Domestic silkworm)   9 8
Nasonia_vitripennis_   (Jewel wasp)   11 10
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   25 23
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   13 12
Linepithema_humile_v1.1   (Argentine ant)   13 12
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   12 11
Solenopsis_invicta_v.2.2.3   (Red fire ant)   10 9
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   12 11
Atta_cephalotes_v1.1 13 12
Camponotus_floridanus_v3.3   (Florida carpenter ant)   13 12
Lucilia_cuprina   (Australian sheep blowfly)   10 8
Drosophila_grimshawi_1.3 11 10
Drosophila_willistoni_1.3 12 10
Drosophila_pseudoobscura_2.13 11 9
Drosophila_persimilis_1.3 10 8
Drosophila_suzukii 11 9
Drosophila_yakuba_1.3 11 9
Drosophila_simulans_1.3 9 8
Drosophila_sechellia_1.3 10 9
Drosophila_melanogaster_76_5   (Fruit fly)   27 26
Drosophila_erecta_1.3 11 9
Drosophila_ananassae_1.3 12 10
Drosophila_virilis_1.2 11 10
Drosophila_mojavensis_1.3 11 10
Megaselia_scalaris_22 8 8
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   15 14
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   16 15
Anopheles_darlingi_22   (American malaria mosquito)   12 11
Anopheles_gambiae_49_3j   (African malaria mosquito)   16 14
Tribolium_castaneum_3.0   (Red flour beetle)   13 12
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   14 13
Acyrthosiphon_pisum_   (Pea aphid)   12 11
Rhodnius_prolixus_22 13 11
Daphnia_pulex_   (Common water flea)   20 19
Strigamia_maritima_22 15 14
Sarcoptes_scabiei 11 10
Tetranychus_urticae_   (Two-spotted spider mite)   11 10
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   13 12
Pristionchus_pacificus_ 13 11
Meloidogyne_incognita_   (Southern root-knot nematode)   9 9
Meloidogyne_hapla_ 5 5
Onchocerca_volvulus_22 16 14
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   16 15
Caenorhabditis_japonica_ 17 15
Caenorhabditis_brenneri_ 39 34
Caenorhabditis_remanei_ 20 18
Caenorhabditis_elegans_76_235   (Roundworm)   46 41
Caenorhabditis_briggsae_2 23 21
Trichinella_spiralis_22 11 9
Hymenolepis_microstoma_ 12 12
Echinococcus_multilocularis_ 14 13
Echinococcus_granulosus_ 13 12
Taenia_solium_   (Pork tapeworm)   11 11
Schistosoma_mansoni_ 17 17
Mnemiopsis_leidyi   (Sea walnut)   16 14
Thelohanellus_kitauei 1 1
Acropora_digitifera_v1.0 16 13
Nematostella_vectensis_1.0   (Starlet sea anemone)   17 13
Hydra_vulgaris 16 15
Amphimedon_queenslandica 14 13
Trichoplax_adhaerens_ 21 15
Proterospongia_sp._ATCC_50818_ 9 8
Monosiga_brevicollis_ 6 6
Sphaeroforma_arctica_JP610_ 61 59
Capsaspora_owczarzaki_ATCC_30864_ 16 16
Conidiobolus_coronatus_NRRL28638_v1.0 9 9
Mortierella_verticillata_NRRL_6337_ 11 11
Phycomyces_blakesleeanus_ 19 19
Rhizopus_oryzae_RA_99-880_ 20 20
Mucor_circinelloides_ 22 22
Rhizomucor_miehei_CAU432_ 14 14
Sporisorium_reilianum_22 3 3
Ustilago_maydis_ 3 3
Mixia_osmundae_IAM_14324_v1.0 7 7
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 7 7
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 5 5
Melampsora_laricis-populina_ 7 7
Rhodotorula_graminis_WP1_v1.0 5 5
Sporobolomyces_roseus_IAM_13481_ 5 5
Microbotryum_violaceum_22 5 5
Wallemia_sebi_v1.0 7 7
Sphaerobolus_stellatus_v1.0 3 3
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 4 4
Hydnomerulius_pinastri_v2.0 3 3
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 3 3
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 3 3
Coprinopsis_cinerea_okayama7_130_v3 4 4
Pleurotus_ostreatus_   (Oyster mushroom)   6 6
Amanita_thiersii_Skay4041_v1.0 4 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3 3
Galerina_marginata_v1.0 5 5
Hebeloma_cylindrosporum_h7_v2.0 4 4
Laccaria_bicolor_S238N-H82_ 4 4
Agaricus_bisporus_var._bisporus_ 4 4
Schizophyllum_commune_ 3 3
Stereum_hirsutum_FP-91666_SS1__v1.0 4 4
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 4 4
Punctularia_strigosozonata_v1.0 6 6
Sebacina_vermifera_MAFF_305830_v1.0 5 5
Fomitiporia_mediterranea_v1.0 4 4
Tulasnella_calospora_AL13/4D_v1.0 7 7
Postia_placenta_ 3 3
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 4 4
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4 4
Phanerochaete_chrysosporium_RP-78_2.1 4 4
Dichomitus_squalens 3 3
Trametes_versicolor_v1.0 4 4
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 7 7
Apiospora_montagnei_NRRL_25634_v1.0 11 11
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 9 9
Podospora_anserina_ 7 7
Sporotrichum_thermophile_ATCC_42464_ 6 6
Thielavia_terrestris_NRRL_8126_ 7 7
Chaetomium_globosum_CBS_148.51_ 6 6
Neurospora_tetrasperma_ 7 7
Neurospora_discreta_FGSC_8579_ 7 7
Neurospora_crassa_OR74A_ 7 7
Cryphonectria_parasitica_   (Chestnut blight fungus)   9 9
Verticillium_albo-atrum_VaMs.102_ 6 6
Verticillium_dahliae_VdLs.17_ 9 9
Acremonium_alcalophilumv_1.0 5 5
Glomerella_graminicola_22 10 10
Fusarium_graminearum_ 7 7
Nectria_haematococca_mpVI_ 12 12
Fusarium_oxysporum_f._sp._lycopersici_4286_ 15 15
Fusarium_verticillioides_7600_ 9 9
Trichoderma_asperellum_CBS_433.97_v1.0 9 9
Trichoderma_atroviride_ 8 8
Trichoderma_citrinoviride_v1.0 8 8
Trichoderma_reesei_1.2 8 8
Trichoderma_virens_Gv29-8_ 8 8
Trichoderma_longibrachiatum_ATCC_18648_v1.0 8 8
Trichoderma_harzianum_CBS_226.95_v1.0 8 8
Amorphotheca_resinae_v1.0   (Creosote fungus)   5 5
Botrytis_cinerea_B05.10_ 7 7
Sclerotinia_sclerotiorum_ 7 7
Blumeria_graminis_22 5 5
Didymella_exigua_CBS_183.55_v1.0 8 8
Leptosphaeria_maculans_22 6 6
Setosphaeria_turcica_v1.0 6 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 6 6
Cochliobolus_victoriae_FI3_v1.0 6 6
Cochliobolus_carbonum_26-R-13_v1.0 6 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 6
Alternaria_brassicicola_ 6 6
Cochliobolus_lunatus_m118_v2.0 7 7
Pyrenophora_teres_f._teres_22 6 6
Pyrenophora_tritici-repentis_ 7 7
Stagonospora_nodorum_ 8 8
Mycosphaerella_graminicola_IPO323_ 6 6
Zasmidium_cellare_ATCC_36951_v1.0 5 5
Dothistroma_septosporum 6 6
Septoria_musiva_v1.0 5 5
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7 7
Paracoccidioides_brasiliensis_Pb18_ 6 6
Coccidioides_posadasii_RMSCC_3488_ 5 5
Coccidioides_immitis_RS_ 5 5
Ajellomyces_dermatitidis_SLH14081_ 6 6
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 5 5
Microsporum_canis_CBS_113480_ 4 4
Trichophyton_equinum_CBS_127.97_ 4 4
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 4 4
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 4 4
Aspergillus_zonatus_v1.0 5 5
Penicillium_chrysogenum_Wisconsin_54-1255_ 6 6
Penicillium_chrysogenum_v1.0 6 6
Aspergillus_acidus_v1.0 10 10
Aspergillus_fumigatus_Af293 6 6
Aspergillus_brasiliensis_v1.0 4 4
Aspergillus_nidulans_FGSC_A4_ 5 5
Aspergillus_sydowii_v1.0 6 6
Aspergillus_versicolor_v1.0 6 6
Aspergillus_glaucus 7 7
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 6 6
Aspergillus_terreus_NIH2624_ 5 5
Aspergillus_tubingensis_v1.0 4 4
Aspergillus_wentii_v1.0 7 7
Aspergillus_oryzae_RIB40_ 8 8
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 7 7
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 6 6
Tuber_melanosporum_Mel28_22 4 4
Tuber_melanosporum_Vittad_   (Perigord truffle)   4 4
Hansenula_polymorpha_v2.0 4 4
Dekkera_bruxellensis_CBS_2499_v2.0 5 5
Pichia_membranifaciensv1.0 4 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 5 5
Candida_dubliniensis_CD36_ 5 5
Candida_tropicalis_MYA-3404_ 5 5
Candida_parapsilosis_ 5 5
Candida_albicans_SC5314 5 5
Lodderomyces_elongisporus_NRRL_YB-4239_ 4 4
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 5 5
Candida_guilliermondii_ATCC_6260_ 5 5
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 5 5
Debaromyces_hansenii 5 5
Wickerhamomyces_anomalus 5 5
Pichia_pastoris_GS115_ 5 5
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 2
Yarrowia_lipolytica_CLIB122 5 5
Candida_lusitaniae_ATCC_42720_ 4 4
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5 5
Vanderwaltozyma_polyspora_DSM_70294_ 4 4
Candida_glabrata_CBS138 3 3
Kluyveromyces_thermotolerans_CBS_6340 4 4
Lachancea_kluyveri_ 4 4
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 4 4
Zygosaccharomyces_rouxii_ 4 4
Saccharomyces_mikatae_MIT 4 4
Saccharomyces_paradoxus_MIT 4 4
Saccharomyces_cerevisiae_76   (Baker's yeast)   4 4
Saccharomyces_bayanus_MIT 3 3
Kluyveromyces_lactis 4 4
Schizosaccharomyces_cryophilus_OY26_22 3 3
Schizosaccharomyces_octosporus_yFS286_ 3 3
Schizosaccharomyces_japonicus_yFS275_ 3 3
Schizosaccharomyces_pombe   (Fission yeast)   4 4
Catenaria_anguillulae_PL171_v1.0 10 10
Allomyces_macrogynus_ATCC_38327_ 30 29
Spizellomyces_punctatus_DAOM_BR117_ 25 24
Dictyostelium_discoideum 13 11
Dictyostelium_purpureum_ 13 11
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 4 4
Entamoeba_histolytica_1 3 3
Selaginella_moellendorffii_ 2 2
Pinus_taeda   (Loblolly pine)   1 1
Eucalyptus_grandis_v201   (Rose gum)   1 1
Theobroma_cacao_B97-61/B2_v1   (Cacao)   1 1
Gossypium_raimondii_v221 4 4
Citrus_clementina_v165 2 2
Citrus_sinensis_v154   (Sweet orange)   1 1
Thellungiella_halophila_v173 2 2
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   2 2
Capsella_rubella_v183 1 1
Arabidopsis_lyrata_   (Lyrate rockcress)   1 1
Arabidopsis_thaliana_10   (Thale cress)   1 1
Medicago_truncatula_   (Barrel medic)   1 1
Phaseolus_vulgaris_v186   (French bean)   1 1
Glycine_max_v109   (Soybean)   2 2
Cucumis_sativus_v122   (Cucumber)   2 2
Fragaria_vesca_   (Wild strawberry)   1 1
Malus_domestica_v196   (Apple)   3 3
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   2 2
Manihot_esculenta_v147   (Cassava)   1 1
Populus_trichocarpa_v156   (Black cottonwood)   1 1
Vitis_vinifera_   (Wine grape)   1 1
Mimulus_guttatus_v140   (Spotted monkey flower)   1 1
Solanum_lycopersicum_v.2.3   (Tomato)   1 1
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 2 2
Aquilegia_coerulea_v195 3 3
Setaria_italica_v164   (Foxtail millet)   1 1
Amborella_trichopoda_22 1 1
Thecamonas_trahens_ATCC_50062_ 1 1
Bigelowiella_natans_CCMP2755_22 44 44
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Ectocarpus_siliculosus 58 57
Aureococcus_anophagefferens_ 14 14
Albugo_laibachii_22 20 13
Pythium_iwayamai_DAOM_BR242034_22 21 13
Pythium_arrhenomanes_ATCC_12531_22 22 12
Pythium_ultimum_v1.7-2 22 12
Pythium_aphanidermatum_DAOM_BR444_22 23 13
Pythium_irregulare_DAOM_BR486_22 23 14
Pythium_vexans_DAOM_BR484_22 22 13
Phytophthora_ramorum_1.1   (Sudden oak death agent)   20 11
Phytophthora_sojae_1.1 22 13
Phytophthora_infestans_T30-4_ 24 14
Phytophthora_capsici_ 15 10
Hyaloperonospora_arabidopsidis_22 6 4
Thalassiosira_pseudonana_CCMP1335 2 2
Tetrahymena_thermophila_SB210_1_ 1 1
Naegleria_gruberi_ 286 284
Trichomonas_vaginalis_ 7 7
Emiliania_huxleyi_CCMP1516_ 5 5
Clostridium_thermocellum_ATCC_27405 1 1
Desulfovibrio_alaskensis_G20 1 1
Roseobacter_litoralis_Och_149 1 1
Azospirillum_brasilense_Sp245 2 2
halophilic_archaeon_DL31 1 1
Halorubrum_lacusprofundi_ATCC_49239 1 1
Haloarcula_marismortui_ATCC_43049 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   65 61
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   21 20
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   17 16
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   15 13
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   40 35
Cryptococcus_neoformans_var._grubii_H99_ 4 4
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 4 4
Paracoccidioides_brasiliensis_Pb01_ 6 6
Paracoccidioides_brasiliensis_Pb03_ 5 5
Coccidioides_posadasii_str._Silveira_ 5 5
Coccidioides_immitis_RMSCC_3703_ 4 4
Coccidioides_immitis_RMSCC_2394_ 5 5
Coccidioides_immitis_H538.4_ 4 4
Ajellomyces_dermatitidis_ER-3_ 6 6
Histoplasma_capsulatum_H143 5 5
Histoplasma_capsulatum_H88 6 6
Histoplasma_capsulatum_G186AR 5 5
Aspergillus_fumigatus_A1163_ 7 7
Candida_albicans_WO-1_ 4 4
Saccharomyces_cerevisiae_UC5 4 4
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_FL100 2 2
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 4 4
Saccharomyces_cerevisiae_YJM269 4 4
Saccharomyces_cerevisiae_T7 4 4
Saccharomyces_cerevisiae_FostersB 2 2
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 3 3
Saccharomyces_cerevisiae_LalvinQA23 4 4
Saccharomyces_cerevisiae_AWRI796 2 2
Saccharomyces_cerevisiae_Sigma1278b 4 4
Saccharomyces_cerevisiae_W303 4 4
Saccharomyces_cerevisiae_JAY291 4 4
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_M22 2 2
Saccharomyces_cerevisiae_T73 2 2
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 4 4
Saccharomyces_cerevisiae_YJM789 4 4
Saccharomyces_cerevisiae_RM11-1a 4 4
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4 4
Schizosaccharomyces_pombe_972h-_ 4 4
Batrachochytrium_dendrobatidis_JEL423_ 19 18
Batrachochytrium_dendrobatidis_JAM81_ 17 15
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   1 1
Clostridium_thermocellum_DSM_1313 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   44 39
Pan_troglodytes_69_2.1.4   (Chimpanzee)   40 36
Gorilla_gorilla_69_3.1   (Western gorilla)   38 37
Pongo_abelii_69_2   (Sumatran orangutan)   43 39
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   44 39
Macaca_mulatta_69_1   (Rhesus monkey)   43 38
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   43 39
Otolemur_garnettii_69_3   (Small-eared galago)   43 38
Microcebus_murinus_69_1   (Gray mouse lemur)   30 30
Rattus_norvegicus_69_3.4   (Norway rat)   38 36
Mus_musculus_69_38   (House mouse)   41 36
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   44 36
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   41 36
Cavia_porcellus_69_3   (Domestic guinea pig)   38 34
Oryctolagus_cuniculus_69_2   (Rabbit)   37 33
Ochotona_princeps_69   (American pika)   41 39
Tupaia_belangeri_69   (Northern tree shrew)   31 29
Sus_scrofa_69_10.2   (Pig)   37 33
Bos_taurus_69_3.1   (Cattle)   43 38
Vicugna_pacos_69_1   (Alpaca)   27 24
Tursiops_truncatus_69_1   (Bottlenose dolphin)   39 35
Mustela_putorius_furo_69_1.0   (Domestic ferret)   43 37
Ailuropoda_melanoleuca_69_1   (Giant panda)   42 38
Canis_familiaris_69_3.1   (Dog)   44 39
Felis_catus_69   (Domestic cat)   35 31
Equus_caballus_69_2   (Horse)   43 38
Myotis_lucifugus_69_2.0   (Little brown bat)   45 39
Pteropus_vampyrus_69_1   (Large flying fox)   42 37
Sorex_araneus_69_1   (European shrew)   18 17
Erinaceus_europaeus_69   (Western European hedgehog)   33 28
Procavia_capensis_69_1   (Cape rock hyrax)   41 37
Loxodonta_africana_69_3   (African savanna elephant)   38 36
Echinops_telfairi_69   (Small Madagascar hedgehog)   36 33
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   33 30
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   29 26
Macropus_eugenii_69_1.0   (Tammar wallaby)   38 36
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   41 35
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   44 38
Ornithorhynchus_anatinus_69_5   (Platypus)   44 38
Petromyzon_marinus_69_7.0   (Sea lamprey)   22 22
Meleagris_gallopavo_69_2   (Turkey)   41 36
Gallus_gallus_69_2   (Chicken)   39 37
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   32 30
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   43 38
Anolis_carolinensis_69_2.0   (Green anole)   41 37
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   39 35
Latimeria_chalumnae_69_1   (Coelacanth)   49 43
Gadus_morhua_69_1   (Atlantic cod)   51 49
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   50 49
Takifugu_rubripes_69_4   (Torafugu)   52 49
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   46 45
Oryzias_latipes_69_1   (Japanese medaka)   46 45
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   57 53
Oreochromis_niloticus_69_1.0   (Nile tilapia)   56 53
Danio_rerio_69_9   (Zebrafish)   52 51
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   26 23
Ciona_intestinalis_69   (Vase tunicate)   30 27
Drosophila_melanogaster_69_5   (Fruit fly)   11 10
Caenorhabditis_elegans_69_215   (Roundworm)   23 21
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4 4
Arabidopsis_thaliana_10   (Thale cress)   1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   162 145
Homo_sapiens__(NCBI_version)   (Human)   80 75
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   40 36
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   19 16
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   17 15
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   12 11
Moniliophthora_perniciosa_FA553__(Genome_survey) 3 3
Lotus_japonicus__(Early_assembly) 1 1
Malus_x_domestica_(Duplicate)   (Apple)   3 3
Ricinus_communis__(Early_assembly)   (Castor bean)   1 1
Nicotiana_benthamiana_0.4.4_(Early_draft) 1 1
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   1 1
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   1 1
Phoenix_dactylifera__(Early_draft)   (Date palm)   1 1
NCBI_plasmid_sequences_(Plasmids) 3 3
TargetDB__(Targets) 67 59
NCBI_2017_08_genome 29203 26524
Protozoadb_2010_08_(Protozoadb) 27 27
NCBI_viral_sequences_(Viral) 1 1
PDB_chains_(SCOP_1.75)_(PDB) 11 11
Protein_Data_Bank_(all_PDB_sequenc) 131 131
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 289 288
STRING_v9.0.5_(STRING) 1759 1589
Uniprot_2018_03_genome 20892 19267

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]