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Domain combinations for Seven-hairpin glycosidases superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Seven-hairpin glycosidases domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   21 21
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   12 12
Pongo_abelii_76_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   8 8
Macaca_mulatta_76_1   (Rhesus monkey)   17 17
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   18 18
Otolemur_garnettii_76_3   (Small-eared galago)   7 7
Microcebus_murinus_76_1   (Gray mouse lemur)   7 6
Rattus_norvegicus_76_5.0   (Norway rat)   8 8
Mus_musculus_76_38   (House mouse)   14 14
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   7 6
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   6 6
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   7 7
Cavia_porcellus_76_3   (Domestic guinea pig)   7 7
Oryctolagus_cuniculus_76_2   (Rabbit)   7 7
Ochotona_princeps_76   (American pika)   7 6
Tupaia_belangeri_76   (Northern tree shrew)   7 5
Sus_scrofa_76_10.2   (Pig)   8 8
Bos_taurus_76_3.1   (Cattle)   7 7
Ovis_aries_76_3.1   (Sheep)   8 8
Vicugna_pacos_76_1   (Alpaca)   6 5
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7 6
Mustela_putorius_furo_76_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_76_1   (Giant panda)   8 8
Canis_familiaris_76_3.1   (Dog)   11 11
Felis_catus_76_6.2   (Domestic cat)   6 6
Equus_caballus_76_2   (Horse)   11 11
Myotis_lucifugus_76_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_76_1   (Large flying fox)   7 6
Sorex_araneus_76_1   (European shrew)   7 4
Erinaceus_europaeus_76   (Western European hedgehog)   9 6
Procavia_capensis_76_1   (Cape rock hyrax)   9 6
Loxodonta_africana_76_3   (African savanna elephant)   13 12
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 6
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   10 10
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_76_1.0   (Tammar wallaby)   7 5
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   8 8
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   9 9
Ornithorhynchus_anatinus_76_5   (Platypus)   11 10
Saccoglossus_kowalevskii_v3.0 6 6
Petromyzon_marinus_76_7.0   (Sea lamprey)   9 9
Meleagris_gallopavo_76_2   (Turkey)   10 10
Gallus_gallus_76_4   (Chicken)   7 7
Anas_platyrhynchos_76_1.0   (Mallard)   7 7
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7 7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   7 7
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   9 9
Anolis_carolinensis_76_2.0   (Green anole)   8 8
Xenopus_laevis_   (African clawed frog)   13 13
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   9 9
Latimeria_chalumnae_76_1   (Coelacanth)   9 9
Lepisosteus_oculatus_76   (Spotted gar)   9 9
Gadus_morhua_76_1   (Atlantic cod)   13 13
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   12 12
Takifugu_rubripes_76_4   (Torafugu)   23 20
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   12 12
Oryzias_latipes_76_1   (Japanese medaka)   13 13
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   9 9
Poecilia_formosa_76   (Amazon molly)   9 9
Oreochromis_niloticus_76_1.0   (Nile tilapia)   11 11
Astyanax_mexicanus_76   (Mexican tetra)   9 9
Danio_rerio_76_9   (Zebrafish)   12 12
Oikopleura_dioica 8 8
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   6 6
Ciona_intestinalis_76   (Vase tunicate)   5 5
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   14 12
Adineta_vaga 18 17
Octopus_bimaculoides_280 7 7
Crassostrea_gigas_22   (Pacific oyster)   4 4
Lottia_gigantea_   (Owl limpet)   6 6
Helobdella_robusta_ 7 7
Capitella_sp._I_ 6 6
Danaus_plexippus_OGS1.0   (Monarch butterfly)   6 5
Heliconius_melpomene_   (Postman butterfly)   6 6
Bombyx_mori_   (Domestic silkworm)   8 8
Nasonia_vitripennis_   (Jewel wasp)   3 3
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   17 17
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   4 4
Linepithema_humile_v1.1   (Argentine ant)   5 5
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   6 5
Solenopsis_invicta_v.2.2.3   (Red fire ant)   7 7
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   5 5
Atta_cephalotes_v1.1 6 6
Camponotus_floridanus_v3.3   (Florida carpenter ant)   5 5
Lucilia_cuprina   (Australian sheep blowfly)   4 4
Drosophila_grimshawi_1.3 4 4
Drosophila_willistoni_1.3 6 5
Drosophila_pseudoobscura_2.13 6 6
Drosophila_persimilis_1.3 5 5
Drosophila_suzukii 5 5
Drosophila_yakuba_1.3 5 5
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_76_5   (Fruit fly)   18 18
Drosophila_erecta_1.3 5 5
Drosophila_ananassae_1.3 6 6
Drosophila_virilis_1.2 3 3
Drosophila_mojavensis_1.3 4 4
Megaselia_scalaris_22 5 4
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   6 6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   6 6
Anopheles_darlingi_22   (American malaria mosquito)   4 4
Anopheles_gambiae_49_3j   (African malaria mosquito)   6 6
Tribolium_castaneum_3.0   (Red flour beetle)   4 4
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   4 4
Acyrthosiphon_pisum_   (Pea aphid)   4 4
Rhodnius_prolixus_22 4 4
Daphnia_pulex_   (Common water flea)   7 7
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 8 8
Tetranychus_urticae_   (Two-spotted spider mite)   5 5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   8 8
Pristionchus_pacificus_ 8 8
Meloidogyne_incognita_   (Southern root-knot nematode)   9 9
Meloidogyne_hapla_ 4 4
Onchocerca_volvulus_22 5 5
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   8 8
Caenorhabditis_japonica_ 9 8
Caenorhabditis_brenneri_ 10 10
Caenorhabditis_remanei_ 8 8
Caenorhabditis_elegans_76_235   (Roundworm)   10 10
Caenorhabditis_briggsae_2 7 7
Trichinella_spiralis_22 4 4
Hymenolepis_microstoma_ 5 5
Echinococcus_multilocularis_ 7 7
Echinococcus_granulosus_ 6 6
Taenia_solium_   (Pork tapeworm)   5 5
Schistosoma_mansoni_ 4 4
Mnemiopsis_leidyi   (Sea walnut)   3 3
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 6 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   8 7
Hydra_vulgaris 5 5
Amphimedon_queenslandica 8 8
Trichoplax_adhaerens_ 5 5
Proterospongia_sp._ATCC_50818_ 5 5
Monosiga_brevicollis_ 5 5
Sphaeroforma_arctica_JP610_ 2 2
Capsaspora_owczarzaki_ATCC_30864_ 4 4
Conidiobolus_coronatus_NRRL28638_v1.0 12 12
Mortierella_verticillata_NRRL_6337_ 9 9
Phycomyces_blakesleeanus_ 7 7
Rhizopus_oryzae_RA_99-880_ 11 11
Mucor_circinelloides_ 7 7
Rhizomucor_miehei_CAU432_ 6 6
Malassezia_globosa_CBS_7966_ 6 6
Sporisorium_reilianum_22 3 3
Ustilago_maydis_ 3 3
Mixia_osmundae_IAM_14324_v1.0 4 4
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 13 12
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 15 15
Melampsora_laricis-populina_ 16 16
Rhodotorula_graminis_WP1_v1.0 3 3
Sporobolomyces_roseus_IAM_13481_ 4 4
Microbotryum_violaceum_22 3 3
Wallemia_sebi_v1.0 2 2
Sphaerobolus_stellatus_v1.0 12 12
Piloderma_croceum_F_1598_v1.0 6 6
Serpula_lacrymans_var._lacrymans_S7.9_ 5 5
Coniophora_puteana 9 9
Hydnomerulius_pinastri_v2.0 5 5
Paxillus_rubicundulus_Ve08.2h10_v1.0 7 7
Pisolithus_microcarpus_441_v1.0 5 5
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 8 8
Pleurotus_ostreatus_   (Oyster mushroom)   9 9
Amanita_thiersii_Skay4041_v1.0 7 7
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7 7
Galerina_marginata_v1.0 11 11
Hebeloma_cylindrosporum_h7_v2.0 8 8
Laccaria_bicolor_S238N-H82_ 10 10
Agaricus_bisporus_var._bisporus_ 7 7
Schizophyllum_commune_ 6 6
Stereum_hirsutum_FP-91666_SS1__v1.0 6 6
Heterobasidion_annosum_ 6 6
Gloeophyllum_trabeumv1.0 4 4
Punctularia_strigosozonata_v1.0 5 5
Sebacina_vermifera_MAFF_305830_v1.0 6 6
Fomitiporia_mediterranea_v1.0 5 5
Tulasnella_calospora_AL13/4D_v1.0 9 9
Postia_placenta_ 9 9
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 5 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 5 5
Phanerochaete_chrysosporium_RP-78_2.1 6 6
Dichomitus_squalens 5 5
Trametes_versicolor_v1.0 5 5
Tremella_mesenterica_   (Witches' butter)   4 4
Daldinia_eschscholzii_EC12_v1.0 9 9
Apiospora_montagnei_NRRL_25634_v1.0 13 13
Magnaporthe_poae_ATCC_64411_22 9 9
Magnaporthe_grisea_70-15_ 9 9
Podospora_anserina_ 9 9
Sporotrichum_thermophile_ATCC_42464_ 8 8
Thielavia_terrestris_NRRL_8126_ 10 10
Chaetomium_globosum_CBS_148.51_ 10 10
Neurospora_tetrasperma_ 8 8
Neurospora_discreta_FGSC_8579_ 8 8
Neurospora_crassa_OR74A_ 8 8
Cryphonectria_parasitica_   (Chestnut blight fungus)   9 9
Verticillium_albo-atrum_VaMs.102_ 8 7
Verticillium_dahliae_VdLs.17_ 8 8
Acremonium_alcalophilumv_1.0 6 6
Glomerella_graminicola_22 11 11
Fusarium_graminearum_ 10 10
Nectria_haematococca_mpVI_ 10 10
Fusarium_oxysporum_f._sp._lycopersici_4286_ 9 9
Fusarium_verticillioides_7600_ 10 10
Trichoderma_asperellum_CBS_433.97_v1.0 8 8
Trichoderma_atroviride_ 8 8
Trichoderma_citrinoviride_v1.0 7 7
Trichoderma_reesei_1.2 8 8
Trichoderma_virens_Gv29-8_ 8 8
Trichoderma_longibrachiatum_ATCC_18648_v1.0 8 8
Trichoderma_harzianum_CBS_226.95_v1.0 9 8
Amorphotheca_resinae_v1.0   (Creosote fungus)   9 9
Botrytis_cinerea_B05.10_ 9 9
Sclerotinia_sclerotiorum_ 9 8
Blumeria_graminis_22 4 4
Didymella_exigua_CBS_183.55_v1.0 12 12
Leptosphaeria_maculans_22 8 8
Setosphaeria_turcica_v1.0 10 10
Cochliobolus_miyabeanus_ATCC_44560_v1.0 10 10
Cochliobolus_victoriae_FI3_v1.0 10 10
Cochliobolus_carbonum_26-R-13_v1.0 10 10
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   11 11
Alternaria_brassicicola_ 9 9
Cochliobolus_lunatus_m118_v2.0 11 11
Pyrenophora_teres_f._teres_22 13 13
Pyrenophora_tritici-repentis_ 12 12
Stagonospora_nodorum_ 11 11
Mycosphaerella_graminicola_IPO323_ 8 8
Zasmidium_cellare_ATCC_36951_v1.0 12 12
Dothistroma_septosporum 8 8
Septoria_musiva_v1.0 9 9
Mycosphaerella_fijiensis_CIRAD86_ 12 12
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 7 7
Paracoccidioides_brasiliensis_Pb18_ 6 6
Coccidioides_posadasii_RMSCC_3488_ 6 6
Coccidioides_immitis_RS_ 6 6
Ajellomyces_dermatitidis_SLH14081_ 8 8
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 8 8
Microsporum_canis_CBS_113480_ 6 6
Trichophyton_equinum_CBS_127.97_ 6 6
Trichophyton_verrucosum_HKI_0517_ 7 7
Arthroderma_benhamiae_CBS_112371_ 7 7
Trichophyton_tonsurans_CBS_112818_ 6 6
Trichophyton_rubrum_CBS_118892_ 6 6
Uncinocarpus_reesii_1704_ 6 6
Aspergillus_zonatus_v1.0 6 6
Penicillium_chrysogenum_Wisconsin_54-1255_ 6 6
Penicillium_chrysogenum_v1.0 5 5
Aspergillus_acidus_v1.0 6 6
Aspergillus_fumigatus_Af293 5 5
Aspergillus_brasiliensis_v1.0 6 6
Aspergillus_nidulans_FGSC_A4_ 7 7
Aspergillus_sydowii_v1.0 7 7
Aspergillus_versicolor_v1.0 6 6
Aspergillus_glaucus 5 5
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 6 6
Aspergillus_terreus_NIH2624_ 6 6
Aspergillus_tubingensis_v1.0 6 6
Aspergillus_wentii_v1.0 6 6
Aspergillus_oryzae_RIB40_ 5 5
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 4 4
Aspergillus_flavus_NRRL3357_ 6 6
Aspergillus_clavatus_NRRL_1_ 5 5
Penicillium_marneffei_ATCC_18224_ 7 7
Tuber_melanosporum_Mel28_22 5 5
Tuber_melanosporum_Vittad_   (Perigord truffle)   5 5
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 3 2
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 2 2
Candida_dubliniensis_CD36_ 2 2
Candida_tropicalis_MYA-3404_ 2 2
Candida_parapsilosis_ 2 2
Candida_albicans_SC5314 2 2
Lodderomyces_elongisporus_NRRL_YB-4239_ 2 2
Babjeviella_inositovora_NRRL_Y-12698_v1.0 3 3
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 2 2
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 2 2
Debaromyces_hansenii 2 2
Wickerhamomyces_anomalus 3 3
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 5 5
Yarrowia_lipolytica_CLIB122 3 3
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 2 2
Vanderwaltozyma_polyspora_DSM_70294_ 3 3
Candida_glabrata_CBS138 3 3
Kluyveromyces_thermotolerans_CBS_6340 3 3
Lachancea_kluyveri_ 3 3
Kluyveromyces_waltii 3 3
Ashbya_gossypii_ATCC_10895_ 3 3
Zygosaccharomyces_rouxii_ 3 3
Saccharomyces_mikatae_MIT 3 3
Saccharomyces_paradoxus_MIT 3 3
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 3
Saccharomyces_bayanus_MIT 4 4
Kluyveromyces_lactis 3 3
Schizosaccharomyces_cryophilus_OY26_22 2 2
Schizosaccharomyces_octosporus_yFS286_ 2 2
Schizosaccharomyces_japonicus_yFS275_ 2 2
Schizosaccharomyces_pombe   (Fission yeast)   2 2
Catenaria_anguillulae_PL171_v1.0 3 3
Allomyces_macrogynus_ATCC_38327_ 2 2
Spizellomyces_punctatus_DAOM_BR117_ 3 3
Dictyostelium_discoideum 6 6
Dictyostelium_purpureum_ 8 8
Selaginella_moellendorffii_ 11 11
Pinus_taeda   (Loblolly pine)   11 10
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   9 9
Theobroma_cacao_B97-61/B2_v1   (Cacao)   6 6
Gossypium_raimondii_v221 20 20
Citrus_clementina_v165 9 9
Citrus_sinensis_v154   (Sweet orange)   4 4
Thellungiella_halophila_v173 5 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   8 8
Capsella_rubella_v183 5 5
Arabidopsis_lyrata_   (Lyrate rockcress)   6 6
Arabidopsis_thaliana_10   (Thale cress)   6 6
Carica_papaya_   (Papaya)   6 6
Medicago_truncatula_   (Barrel medic)   9 9
Phaseolus_vulgaris_v186   (French bean)   11 11
Glycine_max_v109   (Soybean)   11 11
Cucumis_sativus_v122   (Cucumber)   7 7
Fragaria_vesca_   (Wild strawberry)   7 7
Malus_domestica_v196   (Apple)   17 16
Prunus_persica_v139   (Peach)   6 6
Linum_usitatissimum_v200   (Flax)   11 11
Manihot_esculenta_v147   (Cassava)   7 7
Populus_trichocarpa_v156   (Black cottonwood)   7 7
Vitis_vinifera_   (Wine grape)   8 8
Mimulus_guttatus_v140   (Spotted monkey flower)   4 4
Solanum_lycopersicum_v.2.3   (Tomato)   5 5
Solanum_tuberosum_   (Potato)   13 13
Actinidia_chinensis_Hongyang_ 12 10
Aquilegia_coerulea_v195 11 11
Triticum_urartu_22 5 5
Triticum_aestivum_22   (Bread wheat)   15 15
Aegilops_tauschii_22 5 5
Brachypodium_distachyon_   (Stiff brome)   4 4
Oryza_barthii_22   (African wild rice)   5 5
Oryza_meridionalis_22 6 6
Oryza_glumaepatula_22 6 6
Oryza_glaberrima   (African rice)   5 5
Oryza_punctata_22 7 7
Oryza_nivara_22 9 9
Oryza_brachyantha_22   (Malo sina)   4 4
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   7 7
Oryza_sativa_v193   (Rice)   7 7
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   9 9
Panicum_virgatum_v202   (Switchgrass)   11 11
Setaria_italica_v164   (Foxtail millet)   5 5
Zea_mays_subsp._mays_   (Maize)   16 16
Zea_mays_v181   (Maize)   16 16
Sorghum_bicolor_   (Sorghum)   8 8
Musa_balbisiana   (Balbis banana)   8 8
Musa_acuminata_22   (Wild Malaysian banana)   9 9
Amborella_trichopoda_22 4 4
Physcomitrella_patens 4 4
Coccomyxa_subellipsoidea_sp._C-169_v2 6 6
Asterochloris_sp._Cgr/DA1pho_v1.0 4 4
Chlorella_variabilis_sp._NC64A_ 5 4
Chlorella_vulgaris_ 6 6
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 1 1
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_sp._RCC809_ 2 2
Ostreococcus_lucimarinus_CCE9901_ 2 2
Ostreococcus_tauri_ 2 2
Bathycoccus_prasinos_ 3 3
Micromonas_sp._RCC299_ 3 3
Micromonas_pusilla_CCMP1545_v3.0 3 3
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 3 3
Thecamonas_trahens_ATCC_50062_ 5 5
Bigelowiella_natans_CCMP2755_22 8 8
Cyanophora_paradoxa_ 14 14
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 2 2
Trypanosoma_cruzi_strain_CL_Brener 7 7
Trypanosoma_congolense_2.4 3 3
Trypanosoma_brucei_gambiense_v4.1 5 5
Trypanosoma_brucei_TREU927_v4.1 5 5
Ectocarpus_siliculosus 7 7
Aureococcus_anophagefferens_ 8 8
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 5 5
Pythium_arrhenomanes_ATCC_12531_22 8 8
Pythium_ultimum_v1.7-2 5 5
Pythium_aphanidermatum_DAOM_BR444_22 7 6
Pythium_irregulare_DAOM_BR486_22 5 5
Pythium_vexans_DAOM_BR484_22 5 5
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9 9
Phytophthora_sojae_1.1 6 6
Phytophthora_infestans_T30-4_ 6 6
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 1 1
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Fragilariopsis_cylindrus 5 5
Thalassiosira_pseudonana_CCMP1335 4 4
Perkinsus_marinus_ATCC_50983_ 10 10
Symbiodinium_minutum_clade_B1_v1.2 10 9
Naegleria_gruberi_ 4 4
Trichomonas_vaginalis_ 30 30
Guillardia_theta_CCMP2712_v1.0_ 5 5
Emiliania_huxleyi_CCMP1516_ 12 12
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Saccharopolyspora_erythraea_NRRL_2338 1 1
Clostridium_cellulolyticum_H10 1 1
Melioribacter_roseus_P3M 1 1
Chitinophaga_pinensis_DSM_2588 1 1
Caulobacter_sp._K31 1 1
Caulobacter_segnis_ATCC_21756 1 1
Thermoplasma_volcanium_GSS1 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   12 12
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   14 14
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   6 6
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   8 8
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   8 8
Cryptococcus_neoformans_var._grubii_H99_ 3 3
Cryptococcus_neoformans_B-3501A_ 3 3
Cryptococcus_neoformans_JEC21_ 3 3
Paracoccidioides_brasiliensis_Pb01_ 8 8
Paracoccidioides_brasiliensis_Pb03_ 7 7
Coccidioides_posadasii_str._Silveira_ 6 6
Coccidioides_immitis_RMSCC_3703_ 7 7
Coccidioides_immitis_RMSCC_2394_ 6 6
Coccidioides_immitis_H538.4_ 6 6
Ajellomyces_dermatitidis_ER-3_ 8 8
Histoplasma_capsulatum_H143 8 8
Histoplasma_capsulatum_H88 8 8
Histoplasma_capsulatum_G186AR 8 8
Aspergillus_fumigatus_A1163_ 5 5
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 3 3
Saccharomyces_cerevisiae_PW5 3 3
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 2 2
Saccharomyces_cerevisiae_YJM269 1 1
Saccharomyces_cerevisiae_T7 3 3
Saccharomyces_cerevisiae_FostersB 3 3
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 3 3
Saccharomyces_cerevisiae_Vin13 3 3
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 3 3
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 3 3
Saccharomyces_cerevisiae_JAY291 3 3
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 2 2
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 4 4
Saccharomyces_cerevisiae_YJM789 3 3
Saccharomyces_cerevisiae_RM11-1a 3 3
Saccharomyces_cerevisiae_RM11-1a_ 3 3
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 3
Schizosaccharomyces_pombe_972h-_ 2 2
Batrachochytrium_dendrobatidis_JEL423_ 4 4
Batrachochytrium_dendrobatidis_JAM81_ 4 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5 5
Hordeum_vulgare_22   (Domesticated barley)   30 30
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   4 4
Trypanosoma_brucei_Lister_427_v4.1 5 5
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   7 7
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_69_3.1   (Western gorilla)   7 7
Pongo_abelii_69_2   (Sumatran orangutan)   7 7
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   7 7
Macaca_mulatta_69_1   (Rhesus monkey)   8 8
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   7 7
Otolemur_garnettii_69_3   (Small-eared galago)   7 7
Microcebus_murinus_69_1   (Gray mouse lemur)   7 6
Rattus_norvegicus_69_3.4   (Norway rat)   8 8
Mus_musculus_69_38   (House mouse)   7 7
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   7 6
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   6 6
Cavia_porcellus_69_3   (Domestic guinea pig)   6 6
Oryctolagus_cuniculus_69_2   (Rabbit)   7 7
Ochotona_princeps_69   (American pika)   7 6
Tupaia_belangeri_69   (Northern tree shrew)   7 5
Sus_scrofa_69_10.2   (Pig)   8 8
Bos_taurus_69_3.1   (Cattle)   7 7
Vicugna_pacos_69_1   (Alpaca)   6 5
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7 6
Mustela_putorius_furo_69_1.0   (Domestic ferret)   7 7
Ailuropoda_melanoleuca_69_1   (Giant panda)   7 7
Canis_familiaris_69_3.1   (Dog)   8 8
Felis_catus_69   (Domestic cat)   5 5
Equus_caballus_69_2   (Horse)   9 9
Myotis_lucifugus_69_2.0   (Little brown bat)   7 7
Pteropus_vampyrus_69_1   (Large flying fox)   7 6
Sorex_araneus_69_1   (European shrew)   7 4
Erinaceus_europaeus_69   (Western European hedgehog)   9 6
Procavia_capensis_69_1   (Cape rock hyrax)   9 6
Loxodonta_africana_69_3   (African savanna elephant)   10 9
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 6
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   9 6
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   8 6
Macropus_eugenii_69_1.0   (Tammar wallaby)   7 5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   6 6
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   7 7
Ornithorhynchus_anatinus_69_5   (Platypus)   9 9
Petromyzon_marinus_69_7.0   (Sea lamprey)   8 8
Meleagris_gallopavo_69_2   (Turkey)   8 8
Gallus_gallus_69_2   (Chicken)   7 7
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7 7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   8 8
Anolis_carolinensis_69_2.0   (Green anole)   7 7
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   7 7
Latimeria_chalumnae_69_1   (Coelacanth)   7 7
Gadus_morhua_69_1   (Atlantic cod)   9 9
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   10 10
Takifugu_rubripes_69_4   (Torafugu)   12 10
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   9 9
Oryzias_latipes_69_1   (Japanese medaka)   9 9
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   9 9
Oreochromis_niloticus_69_1.0   (Nile tilapia)   10 10
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   3 3
Ciona_intestinalis_69   (Vase tunicate)   5 5
Drosophila_melanogaster_69_5   (Fruit fly)   5 5
Caenorhabditis_elegans_69_215   (Roundworm)   7 7
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 3
Arabidopsis_thaliana_10   (Thale cress)   5 5

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   25 25
Homo_sapiens__(NCBI_version)   (Human)   8 8
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   7 7
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   9 9
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   7 7
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   5 5
Moniliophthora_perniciosa_FA553__(Genome_survey) 18 18
Lotus_japonicus__(Early_assembly) 7 7
Malus_x_domestica_(Duplicate)   (Apple)   17 16
Ricinus_communis__(Early_assembly)   (Castor bean)   5 5
Nicotiana_benthamiana_0.4.4_(Early_draft) 10 10
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   5 5
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   5 5
Phoenix_dactylifera__(Early_draft)   (Date palm)   10 10
TargetDB__(Targets) 8 8
Protein_Data_Bank_(all_PDB_sequenc) 32 32
NCBI_viral_sequences_(Viral) 1 1
Protozoadb_2010_08_(Protozoadb) 81 81
PDB_chains_(SCOP_1.75)_(PDB) 9 9
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 83 83
STRING_v9.0.5_(STRING) 661 651
NCBI_2017_08_genome 6450 6417
Uniprot_2018_03_genome 9778 9635

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