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Domain combinations for Chondroitin AC/alginate lyase superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Chondroitin AC/alginate lyase domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   3 3
Pan_troglodytes_76_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_76_3.1   (Western gorilla)   1 1
Pongo_abelii_76_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   1 1
Papio_anubis_76   (Olive baboon)   1 1
Macaca_mulatta_76_1   (Rhesus monkey)   2 2
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   3 3
Otolemur_garnettii_76_3   (Small-eared galago)   1 1
Microcebus_murinus_76_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_76_5.0   (Norway rat)   2 2
Mus_musculus_76_38   (House mouse)   2 2
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   1 1
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   1 1
Cavia_porcellus_76_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_76_2   (Rabbit)   2 2
Sus_scrofa_76_10.2   (Pig)   1 1
Bos_taurus_76_3.1   (Cattle)   2 2
Ovis_aries_76_3.1   (Sheep)   1 1
Vicugna_pacos_76_1   (Alpaca)   1 1
Tursiops_truncatus_76_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_76_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_76_1   (Giant panda)   1 1
Canis_familiaris_76_3.1   (Dog)   2 2
Felis_catus_76_6.2   (Domestic cat)   2 2
Equus_caballus_76_2   (Horse)   1 1
Myotis_lucifugus_76_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_76_1   (Large flying fox)   1 1
Sorex_araneus_76_1   (European shrew)   1 1
Erinaceus_europaeus_76   (Western European hedgehog)   1 1
Procavia_capensis_76_1   (Cape rock hyrax)   1 1
Loxodonta_africana_76_3   (African savanna elephant)   1 1
Echinops_telfairi_76   (Small Madagascar hedgehog)   1 1
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_76_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   2 2
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_76_5   (Platypus)   3 3
Petromyzon_marinus_76_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_76_2   (Turkey)   2 2
Gallus_gallus_76_4   (Chicken)   2 2
Anas_platyrhynchos_76_1.0   (Mallard)   2 2
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   1 1
Ficedula_albicollis_76_1.0   (Collared flycatcher)   2 2
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_76_2.0   (Green anole)   2 2
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_76_1   (Coelacanth)   2 2
Lepisosteus_oculatus_76   (Spotted gar)   2 2
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_76_4   (Torafugu)   2 2
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   1 1
Oryzias_latipes_76_1   (Japanese medaka)   4 4
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   1 1
Poecilia_formosa_76   (Amazon molly)   3 3
Oreochromis_niloticus_76_1.0   (Nile tilapia)   2 2
Astyanax_mexicanus_76   (Mexican tetra)   1 1
Danio_rerio_76_9   (Zebrafish)   4 4
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_76   (Vase tunicate)   2 2
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1 1
Adineta_vaga 13 13
Meloidogyne_incognita_   (Southern root-knot nematode)   2 2
Meloidogyne_hapla_ 1 1
Acropora_digitifera_v1.0 1 1
Nematostella_vectensis_1.0   (Starlet sea anemone)   5 5
Proterospongia_sp._ATCC_50818_ 3 3
Monosiga_brevicollis_ 4 4
Sphaeroforma_arctica_JP610_ 17 17
Mortierella_verticillata_NRRL_6337_ 3 3
Phycomyces_blakesleeanus_ 3 3
Rhizopus_oryzae_RA_99-880_ 2 2
Mucor_circinelloides_ 2 2
Rhizomucor_miehei_CAU432_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 2 2
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 2 2
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 2 2
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 5 5
Piloderma_croceum_F_1598_v1.0 9 9
Serpula_lacrymans_var._lacrymans_S7.9_ 3 3
Coniophora_puteana 3 3
Hydnomerulius_pinastri_v2.0 4 4
Paxillus_rubicundulus_Ve08.2h10_v1.0 3 3
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 2 2
Coprinopsis_cinerea_okayama7_130_v3 6 6
Pleurotus_ostreatus_   (Oyster mushroom)   7 7
Amanita_thiersii_Skay4041_v1.0 4 4
Amanita_muscaria_Koide_v1.0   (Fly agaric)   5 5
Galerina_marginata_v1.0 5 5
Hebeloma_cylindrosporum_h7_v2.0 3 3
Laccaria_bicolor_S238N-H82_ 3 3
Agaricus_bisporus_var._bisporus_ 3 3
Schizophyllum_commune_ 3 3
Stereum_hirsutum_FP-91666_SS1__v1.0 6 6
Heterobasidion_annosum_ 4 4
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 4 4
Sebacina_vermifera_MAFF_305830_v1.0 5 5
Fomitiporia_mediterranea_v1.0 3 3
Tulasnella_calospora_AL13/4D_v1.0 12 11
Postia_placenta_ 4 4
Wolfiporia_cocos_MD-104_SS10__v1.0 2 2
Fomitopsis_pinicolav1.0 2 2
Fomitopsis_pinicola_FP-58527_SS1_v3.0 2 2
Phanerochaete_chrysosporium_RP-78_2.1 4 4
Dichomitus_squalens 7 7
Trametes_versicolor_v1.0 6 6
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 1 1
Podospora_anserina_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   1 1
Verticillium_albo-atrum_VaMs.102_ 4 4
Verticillium_dahliae_VdLs.17_ 4 4
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 6 6
Fusarium_oxysporum_f._sp._lycopersici_4286_ 5 5
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 5 5
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 5 5
Trichoderma_longibrachiatum_ATCC_18648_v1.0 3 3
Trichoderma_harzianum_CBS_226.95_v1.0 6 6
Botrytis_cinerea_B05.10_ 2 2
Didymella_exigua_CBS_183.55_v1.0 1 1
Leptosphaeria_maculans_22 1 1
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 2 2
Aspergillus_fumigatus_Af293 4 4
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 3 3
Neosartorya_fischeri_NRRL_181_ 4 4
Aspergillus_terreus_NIH2624_ 2 2
Aspergillus_tubingensis_v1.0 2 2
Aspergillus_wentii_v1.0 1 1
Aspergillus_oryzae_RIB40_ 4 4
Aspergillus_niger_22 2 2
Aspergillus_niger_ATCC_1015_ 2 2
Aspergillus_flavus_NRRL3357_ 4 4
Penicillium_marneffei_ATCC_18224_ 1 1
Tuber_melanosporum_Mel28_22 1 1
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Micromonas_sp._RCC299_ 1 1
Porphyridium_purpureum_02_2012 1 1
Giardia_lamblia_2.3 3 3
Pythium_iwayamai_DAOM_BR242034_22 2 2
Pythium_arrhenomanes_ATCC_12531_22 1 1
Pythium_ultimum_v1.7-2 1 1
Pythium_irregulare_DAOM_BR486_22 3 3
Pythium_vexans_DAOM_BR484_22 1 1
Phytophthora_sojae_1.1 1 1
Phytophthora_capsici_ 3 3
Phaeodactylum_tricornutumCCAP_1055/1 8 8
Naegleria_gruberi_ 1 1
Trichomonas_vaginalis_ 4 4
Acaryochloris_marina_MBIC11017 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeobacter_violaceus_PCC_7421 2 2
Mycoplasma_crocodyli_MP145 1 1
Mycoplasma_fermentans_M64 1 1
Eggerthella_sp._YY7918 1 1
Thermobispora_bispora_DSM_43833 1 1
Catenulispora_acidiphila_DSM_44928 4 4
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_sp._EAN1pec 1 1
Frankia_alni_ACN14a 1 1
Streptosporangium_roseum_DSM_43021 6 6
Kitasatospora_setae_KM-6054 1 1
Streptomyces_coelicolor_A3(2) 5 5
Streptomyces_sp._PAMC26508 2 2
Streptomyces_flavogriseus_ATCC_33331 2 2
Streptomyces_sp._SirexAA-E 1 1
Streptomyces_griseus_subsp._griseus_NBRC_13350 2 2
Streptomyces_bingchenggensis_BCW-1 10 10
Streptomyces_violaceusniger_Tu_4113 8 8
Streptomyces_avermitilis_MA-4680 4 4
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 3 3
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 4 4
Actinosynnema_mirum_DSM_43827 1 1
Pseudonocardia_dioxanivorans_CB1190 1 1
Amycolatopsis_mediterranei_U32 6 6
Kribbella_flavida_DSM_17836 2 2
Propionibacterium_acnes_SK137 1 1
Rhodococcus_opacus_B4 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Beutenbergia_cavernae_DSM_12333 7 7
Microbacterium_testaceum_StLB037 2 2
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 1 1
Arthrobacter_chlorophenolicus_A6 1 1
Arthrobacter_aurescens_TC1 1 1
Arthrobacter_arilaitensis_Re117 1 1
Arthrobacter_sp._Rue61a 2 2
Arthrobacter_sp._FB24 1 1
Anaerolinea_thermophila_UNI-1 2 2
Erysipelothrix_rhusiopathiae_str._Fujisawa 4 4
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Clostridium_saccharolyticum_WM1 6 6
Clostridium_phytofermentans_ISDg 4 4
Roseburia_hominis_A2-183 1 1
Alkaliphilus_metalliredigens_QYMF 1 1
Clostridium_novyi_NT 1 1
Clostridium_perfringens_ATCC_13124 3 3
Clostridium_cellulovorans_743B 1 1
Mahella_australiensis_50-1_BON 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2
Melissococcus_plutonius_DAT561 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecalis_62 2 2
Lactobacillus_casei_ATCC_334 2 2
Lactobacillus_rhamnosus_Lc_705 2 2
Streptococcus_intermedius_JTH08 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 2 2
Streptococcus_parauberis_KCTC_11537 1 1
Streptococcus_pyogenes_str._Manfredo 1 1
Streptococcus_pneumoniae_P1031 2 2
Streptococcus_agalactiae_A909 1 1
Streptococcus_suis_P1/7 1 1
Exiguobacterium_sp._AT1b 3 3
Paenibacillus_sp._JDR-2 8 8
Paenibacillus_terrae_HPL-003 2 2
Paenibacillus_mucilaginosus_3016 10 10
Paenibacillus_polymyxa_M1 2 2
Bacillus_selenitireducens_MLS10 2 2
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_anthracis_str._A0248 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Staphylococcus_aureus_subsp._aureus_JH1 1 1
Staphylococcus_aureus 1 1
Gemmatimonas_aurantiaca_T-27 1 1
Melioribacter_roseus_P3M 4 4
Chloroherpeton_thalassium_ATCC_35110 3 3
Prosthecochloris_aestuarii_DSM_271 2 1
Haliscomenobacter_hydrossis_DSM_1100 4 4
Niastella_koreensis_GR20-10 11 11
Chitinophaga_pinensis_DSM_2588 5 5
Rhodothermus_marinus_DSM_4252 2 2
Cyclobacterium_marinum_DSM_745 13 12
Fibrella_aestuarina 5 5
Leadbetterella_byssophila_DSM_17132 1 1
Dyadobacter_fermentans_DSM_18053 4 4
Spirosoma_linguale_DSM_74 5 5
Runella_slithyformis_DSM_19594 6 6
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 2 2
Prevotella_ruminicola_23 1 1
Bacteroides_helcogenes_P_36-108 7 7
Bacteroides_vulgatus_ATCC_8482 3 3
Bacteroides_thetaiotaomicron_VPI-5482 11 11
Bacteroides_fragilis_YCH46 2 2
Pedobacter_saltans_DSM_12145 19 19
Pedobacter_heparinus_DSM_2366 22 22
Sphingobacterium_sp._21 3 3
Owenweeksia_hongkongensis_DSM_17368 2 2
Krokinobacter_sp._4H-3-7-5 2 2
Gramella_forsetii_KT0803 1 1
Lacinutrix_sp._5H-3-7-4 1 1
Croceibacter_atlanticus_HTCC2559 1 1
Zobellia_galactanivorans 5 5
Cellulophaga_algicola_DSM_14237 2 2
Cellulophaga_lytica_DSM_7489 1 1
Polaribacter_sp._MED152 1 1
Ornithobacterium_rhinotracheale_DSM_15997 3 3
Capnocytophaga_ochracea_DSM_7271 1 1
Flavobacterium_branchiophilum_FL-15 1 1
Flavobacterium_columnare_ATCC_49512 2 2
Phycisphaera_mikurensis_NBRC_102666 2 2
Coraliomargarita_akajimensis_DSM_45221 2 2
Opitutus_terrae_PB90-1 2 2
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Sphaerochaeta_pleomorpha_str._Grapes 1 1
Sphaerochaeta_globus_str._Buddy 2 2
Sphaerochaeta_coccoides_DSM_17374 3 3
Treponema_brennaborense_DSM_12168 3 3
Candidatus_Solibacter_usitatus_Ellin6076 8 8
Granulicella_tundricola_MP5ACTX9 3 3
Granulicella_mallensis_MP5ACTX8 8 8
Candidatus_Koribacter_versatilis_Ellin345 1 1
Terriglobus_saanensis_SP1PR4 4 4
Terriglobus_roseus_DSM_18391 2 2
Candidatus_Nitrospira_defluvii 2 2
Streptobacillus_moniliformis_DSM_12112 3 3
Ilyobacter_polytropus_DSM_2926 2 2
Bacteriovorax_marinus_SJ 1 1
Helicobacter_bizzozeronii_CIII-1 2 2
Helicobacter_felis_ATCC_49179 3 3
Helicobacter_acinonychis_str._Sheeba 1 1
Helicobacter_pylori_B38 1 1
Desulfarculus_baarsii_DSM_2075 1 1
Desulfobacca_acetoxidans_DSM_11109 2 2
Syntrophus_aciditrophicus_SB 2 2
Desulfomonile_tiedjei_DSM_6799 4 4
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfovibrio_aespoeensis_Aspo-2 2 2
Desulfovibrio_salexigens_DSM_2638 2 2
Geobacter_metallireducens_GS-15 1 1
Sorangium_cellulosum_'So_ce_56' 4 4
Anaeromyxobacter_sp._Fw109-5 1 1
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Stigmatella_aurantiaca_DW4/3-1 1 1
Corallococcus_coralloides_DSM_2259 2 2
Myxococcus_xanthus_DK_1622 1 1
Myxococcus_fulvus_HW-1 1 1
Thauera_sp._MZ1T 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2 2
Burkholderia_rhizoxinica_HKI_454 1 1
Burkholderia_phytofirmans_PsJN 1 1
Burkholderia_phymatum_STM815 1 1
Burkholderia_xenovorans_LB400 1 1
Ralstonia_pickettii_12D 2 2
Ralstonia_solanacearum_CFBP2957 2 2
Burkholderia_sp._RPE64 1 1
Burkholderia_sp._CCGE1002 1 1
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 2 2
Burkholderia_cenocepacia_HI2424 2 2
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Burkholderia_glumae_BGR1 1 1
Variovorax_paradoxus_S110 1 1
Rhodoferax_ferrireducens_T118 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Collimonas_fungivorans_Ter331 1 1
Janthinobacterium_sp._Marseille 1 1
Advenella_kashmirensis_WT001 1 1
Bordetella_avium_197N 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 2 2
Phaeobacter_gallaeciensis_2.10 1 1
Magnetospirillum_magneticum_AMB-1 2 2
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
Candidatus_Pelagibacter_sp._IMCC9063 1 1
Methylobacterium_nodulans_ORS_2060 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1
Rhizobium_etli_CIAT_652 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_tumefaciens_str._C58 1 1
Agrobacterium_radiobacter_K84 2 2
Agrobacterium_sp._H13-3 2 2
Agrobacterium_vitis_S4 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 1 1
Beijerinckia_indica_subsp._indica_ATCC_9039 1 1
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 1 1
Methylocystis_sp._SC2 1 1
Saccharophagus_degradans_2-40 3 3
Tolumonas_auensis_DSM_9187 1 1
Aeromonas_veronii_B565 1 1
Vibrio_fischeri_MJ11 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_splendidus_LGP32 2 2
Vibrio_vulnificus_MO6-24/O 2 2
Photobacterium_profundum_SS9 1 1
Psychromonas_ingrahamii_37 1 1
Psychromonas_sp._CNPT3 3 3
Shewanella_frigidimarina_NCIMB_400 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 1 1
Glaciecola_sp._4H-3-7+YE-5 1 1
Alteromonas_sp._SN2 1 1
Alcanivorax_borkumensis_SK2 1 1
Marinomonas_sp._MWYL1 1 1
Methylomonas_methanica_MC09 1 1
Frateuria_aurantia_DSM_6220 1 1
Stenotrophomonas_maltophilia_K279a 2 2
Allochromatium_vinosum_DSM_180 1 1
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_halophilus_Nc4 2 2
Proteus_mirabilis_HI4320 2 2
Edwardsiella_ictaluri_93-146 2 2
Edwardsiella_tarda_EIB202 2 2
Rahnella_sp._Y9602 2 2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2
Yersinia_pseudotuberculosis_IP_31758 4 4
Yersinia_pestis_Pestoides_F 4 4
Yersinia_enterocolitica_subsp._enterocolitica_8081 4 4
Serratia_sp._AS12 1 1
Serratia_sp._ATCC_39006 1 1
Serratia_plymuthica_AS9 1 1
Dickeya_dadantii_Ech703 1 1
Dickeya_zeae_Ech1591 1 1
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 1 1
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 3 3
Pantoea_sp._At-9b 1 1
Pantoea_ananatis_LMG_20103 1 1
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 2 2
Erwinia_pyrifoliae_Ep1/96 1 1
Cronobacter_turicensis_z3032 1 1
Klebsiella_oxytoca_E718 3 3
Klebsiella_variicola_At-22 3 3
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 1 1
Azotobacter_vinelandii_DJ 2 2
Pseudomonas_sp._TKP 1 1
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_entomophila_L48 2 2
Pseudomonas_syringae_pv._tomato_str._DC3000 2 2
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 2 2
Pseudomonas_protegens_Pf-5 1 1
Pseudomonas_fluorescens_SBW25 1 1
Pseudomonas_mendocina_ymp 2 2
Pseudomonas_aeruginosa_UCBPP-PA14 2 2
Pseudomonas_sp._VLB120 2 2
Francisella_sp._TX077308 1 1
Ignicoccus_hospitalis_KIN4/I 1 1
Caldivirga_maquilingensis_IC-167 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanocella_paludicola_SANAE 4 4
Ferroglobus_placidus_DSM_10642 1 1
Haloterrigena_turkmenica_DSM_5511 1 1
Halomicrobium_mukohataei_DSM_12286 2 2
Haloarcula_hispanica_ATCC_33960 2 2
Haloarcula_marismortui_ATCC_43049 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   3 3
Cryptococcus_neoformans_var._grubii_H99_ 4 4
Cryptococcus_neoformans_B-3501A_ 3 3
Cryptococcus_neoformans_JEC21_ 3 3
Aspergillus_fumigatus_A1163_ 4 4
Batrachochytrium_dendrobatidis_JEL423_ 1 1
Batrachochytrium_dendrobatidis_JAM81_ 1 1
Cyanothece_sp._PCC_7425 1 1
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Cyanobacterium_stanieri_PCC_7202 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 1 1
Mycoplasma_fermentans_JER 1 1
Mycoplasma_fermentans_PG18 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Frankia_sp._CcI3 1 1
Streptomyces_rapamycinicus_NRRL_5491 6 6
Streptomyces_davawensis_JCM_4913 5 5
Streptomyces_fulvissimus_DSM_40593 2 2
Streptomyces_venezuelae_ATCC_10712 4 4
Streptomyces_collinus_Tu_365 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 4 4
Amycolatopsis_mediterranei_RB 6 6
Amycolatopsis_mediterranei_S699 6 6
Amycolatopsis_mediterranei_S699 6 6
Amycolatopsis_orientalis_HCCB10007 3 3
Propionibacterium_acnes_ATCC_11828 1 1
Propionibacterium_acnes_TypeIA2_P.acn31 1 1
Propionibacterium_acnes_TypeIA2_P.acn17 1 1
Propionibacterium_acnes_TypeIA2_P.acn33 1 1
Propionibacterium_acnes_C1 1 1
Propionibacterium_acnes_HL096PA1 1 1
Propionibacterium_acnes_6609 1 1
Propionibacterium_acnes_266 1 1
Propionibacterium_acnes_KPA171202 1 1
Actinoplanes_friuliensis_DSM_7358 1 1
Mycobacterium_gilvum_Spyr1 1 1
Erysipelothrix_rhusiopathiae_SY1027 4 4
Desulfosporosinus_meridiei_DSM_13257 1 1
Clostridium_perfringens_SM101 3 3
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_BKT015925 2 2
Melissococcus_plutonius_ATCC_35311 1 1
Enterococcus_mundtii_QU_25 2 2
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 2 2
Enterococcus_faecalis_OG1RF 2 2
Enterococcus_faecalis_V583 3 3
Lactobacillus_paracasei_subsp._paracasei_8700:2 2 2
Lactobacillus_casei_LOCK919 2 2
Lactobacillus_casei_W56 2 2
Lactobacillus_casei_LC2W 2 2
Lactobacillus_casei_BD-II 2 2
Lactobacillus_casei_BL23 2 2
Lactobacillus_casei_str._Zhang 2 2
Lactobacillus_rhamnosus_LOCK908 2 2
Lactobacillus_rhamnosus_LOCK900 2 2
Lactobacillus_rhamnosus_ATCC_8530 2 2
Streptococcus_constellatus_subsp._pharyngis_C1050 2 2
Streptococcus_constellatus_subsp._pharyngis_C818 2 2
Streptococcus_constellatus_subsp._pharyngis_C232 2 2
Streptococcus_intermedius_B196 2 2
Streptococcus_intermedius_C270 2 2
Streptococcus_anginosus_C238 2 2
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 2 2
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 2 2
Streptococcus_iniae_SF1 2 2
Streptococcus_pyogenes_HSC5 2 2
Streptococcus_pyogenes_A20 2 2
Streptococcus_pyogenes_MGAS1882 2 2
Streptococcus_pyogenes_MGAS15252 2 2
Streptococcus_pyogenes_Alab49 2 2
Streptococcus_pyogenes_MGAS10750 2 2
Streptococcus_pyogenes_MGAS10270 3 3
Streptococcus_pyogenes_MGAS2096 3 3
Streptococcus_pyogenes_MGAS9429 2 2
Streptococcus_pyogenes_MGAS6180 2 2
Streptococcus_pyogenes_NZ131 2 2
Streptococcus_pyogenes_MGAS8232 2 2
Streptococcus_pyogenes_MGAS10394 2 2
Streptococcus_pyogenes_MGAS315 2 2
Streptococcus_pyogenes_SSI-1 2 2
Streptococcus_pyogenes_M1_476 2 2
Streptococcus_pyogenes_MGAS5005 2 2
Streptococcus_pyogenes_M1_GAS 2 2
Streptococcus_pneumoniae_A026 3 3
Streptococcus_pneumoniae_ST556 2 2
Streptococcus_pneumoniae_SPNA45 2 2
Streptococcus_pneumoniae_SPN994039 1 1
Streptococcus_pneumoniae_SPN994038 1 1
Streptococcus_pneumoniae_SPN034183 1 1
Streptococcus_pneumoniae_SPN034156 1 1
Streptococcus_pneumoniae_INV104 2 2
Streptococcus_pneumoniae_INV200 2 2
Streptococcus_pneumoniae_OXC141 1 1
Streptococcus_pneumoniae_gamPNI0373 2 2
Streptococcus_pneumoniae_AP200 2 2
Streptococcus_pneumoniae_ATCC_700669 2 2
Streptococcus_pneumoniae_TCH8431/19A 2 2
Streptococcus_pneumoniae_CGSP14 2 2
Streptococcus_pneumoniae_G54 2 2
Streptococcus_pneumoniae_JJA 2 2
Streptococcus_pneumoniae_70585 2 2
Streptococcus_pneumoniae_Hungary19A-6 2 2
Streptococcus_pneumoniae_Taiwan19F-14 2 2
Streptococcus_pneumoniae_D39 2 2
Streptococcus_pneumoniae_670-6B 2 2
Streptococcus_pneumoniae_R6 2 2
Streptococcus_pneumoniae_TIGR4 2 2
Streptococcus_agalactiae_ILRI112 2 2
Streptococcus_agalactiae_ILRI005 2 2
Streptococcus_agalactiae_09mas018883 2 2
Streptococcus_agalactiae_2-22 2 2
Streptococcus_agalactiae_SA20-06 2 2
Streptococcus_agalactiae_GD201008-001 1 1
Streptococcus_agalactiae_NEM316 2 2
Streptococcus_agalactiae_2603V/R 2 2
Streptococcus_suis_T15 2 2
Streptococcus_suis_SC070731 2 2
Streptococcus_suis_S735 2 2
Streptococcus_suis_ST3 2 2
Streptococcus_suis_D9 2 2
Streptococcus_suis_SS12 2 2
Streptococcus_suis_ST1 2 2
Streptococcus_suis_A7 3 3
Streptococcus_suis_JS14 2 2
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 3 3
Streptococcus_suis_98HAH33 3 3
Streptococcus_suis_05ZYH33 3 3
Paenibacillus_sp._Y412MC10 6 6
Paenibacillus_mucilaginosus_KNP414 10 10
Paenibacillus_mucilaginosus_K02 11 11
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 2 2
Paenibacillus_polymyxa_E681 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_serovar_konkukian_str._97-27 1 1
Bacillus_cereus_biovar_anthracis_str._CI 1 1
Bacillus_cereus_AH820 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_E33L 2 2
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Staphylococcus_aureus_subsp._aureus_MSHR1132 1 1
Staphylococcus_aureus_CA-347 1 1
Staphylococcus_aureus_Bmb9393 1 1
Staphylococcus_aureus_M1 1 1
Staphylococcus_aureus_08BA02176 2 2
Staphylococcus_aureus_ST228/18412 1 1
Staphylococcus_aureus_ST228/18341 1 1
Staphylococcus_aureus_ST228/16125 1 1
Staphylococcus_aureus_ST228/16035 1 1
Staphylococcus_aureus_ST228/15532 1 1
Staphylococcus_aureus_ST228/10497 1 1
Staphylococcus_aureus_ST228/10388 1 1
Staphylococcus_aureus_04-02981 1 1
Staphylococcus_aureus_RF122 2 2
Staphylococcus_aureus_subsp._aureus_Z172 1 1
Staphylococcus_aureus_subsp._aureus_6850 2 2
Staphylococcus_aureus_subsp._aureus_SA957 1 1
Staphylococcus_aureus_subsp._aureus_CN1 1 1
Staphylococcus_aureus_subsp._aureus_SA40 1 1
Staphylococcus_aureus_subsp._aureus_11819-97 1 1
Staphylococcus_aureus_subsp._aureus_M013 1 1
Staphylococcus_aureus_subsp._aureus_HO_5096_0412 1 1
Staphylococcus_aureus_subsp._aureus_VC40 1 1
Staphylococcus_aureus_subsp._aureus_T0131 1 1
Staphylococcus_aureus_subsp._aureus_LGA251 2 2
Staphylococcus_aureus_subsp._aureus_ECT-R_2 1 1
Staphylococcus_aureus_subsp._aureus_JKD6159 2 2
Staphylococcus_aureus_subsp._aureus_ED133 1 1
Staphylococcus_aureus_subsp._aureus_ED98 1 1
Staphylococcus_aureus_subsp._aureus_TW20 1 1
Staphylococcus_aureus_subsp._aureus_55/2053 2 2
Staphylococcus_aureus_subsp._aureus_TCH60 2 2
Staphylococcus_aureus_subsp._aureus_str._JKD6008 1 1
Staphylococcus_aureus_subsp._aureus_71193 2 2
Staphylococcus_aureus_subsp._aureus_S0385 2 2
Staphylococcus_aureus_subsp._aureus_str._Newman 1 1
Staphylococcus_aureus_subsp._aureus_Mu3 1 1
Staphylococcus_aureus_subsp._aureus_USA300_TCH1516 1 1
Staphylococcus_aureus_subsp._aureus_USA300_FPR3757 1 1
Staphylococcus_aureus_subsp._aureus_JH9 1 1
Staphylococcus_aureus_subsp._aureus_MSSA476 1 1
Staphylococcus_aureus_subsp._aureus_MRSA252 2 2
Staphylococcus_aureus_subsp._aureus_MW2 1 1
Staphylococcus_aureus_subsp._aureus_N315 1 1
Staphylococcus_aureus_subsp._aureus_Mu50 1 1
Staphylococcus_aureus_subsp._aureus_COL 1 1
Staphylococcus_aureus_subsp._aureus_NCTC_8325 1 1
Echinicola_vietnamensis_DSM_17526 4 4
Emticicia_oligotrophica_DSM_17448 3 3
Prevotella_dentalis_DSM_3688 3 3
Alistipes_shahii_WAL_8301 9 8
Bacteroides_xylanisolvens_XB1A 13 13
Bacteroides_fragilis_638R 2 2
Bacteroides_fragilis_NCTC_9343 3 3
Nonlabens_dokdonensis_DSW-6 1 1
Singulisphaera_acidiphila_DSM_18658 1 1
Spirochaeta_thermophila_DSM_6578 2 2
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_SouthAfrica20 1 1
Helicobacter_pylori_UM298 1 1
Helicobacter_pylori_UM066 1 1
Helicobacter_pylori_UM037 1 1
Helicobacter_pylori_UM299 1 1
Helicobacter_pylori_UM032 1 1
Helicobacter_pylori_OK310 1 1
Helicobacter_pylori_OK113 1 1
Helicobacter_pylori_Rif2 1 1
Helicobacter_pylori_Rif1 1 1
Helicobacter_pylori_HUP-B14 1 1
Helicobacter_pylori_PeCan18 1 1
Helicobacter_pylori_Shi169 1 1
Helicobacter_pylori_Shi112 1 1
Helicobacter_pylori_Shi417 1 1
Helicobacter_pylori_XZ274 1 1
Helicobacter_pylori_Aklavik117 1 1
Helicobacter_pylori_SNT49 1 1
Helicobacter_pylori_Puno135 1 1
Helicobacter_pylori_Puno120 1 1
Helicobacter_pylori_ELS37 1 1
Helicobacter_pylori_Gambia94/24 1 1
Helicobacter_pylori_SouthAfrica7 1 1
Helicobacter_pylori_India7 1 1
Helicobacter_pylori_Lithuania75 1 1
Helicobacter_pylori_2017 1 1
Helicobacter_pylori_2018 1 1
Helicobacter_pylori_F57 1 1
Helicobacter_pylori_F30 1 1
Helicobacter_pylori_F16 1 1
Helicobacter_pylori_Sat464 1 1
Helicobacter_pylori_Cuz20 1 1
Helicobacter_pylori_PeCan4 1 1
Helicobacter_pylori_SJM180 1 1
Helicobacter_pylori_B8 1 1
Helicobacter_pylori_52 1 1
Helicobacter_pylori_v225d 1 1
Helicobacter_pylori_83 1 1
Helicobacter_pylori_35A 1 1
Helicobacter_pylori_P12 1 1
Helicobacter_pylori_G27 1 1
Helicobacter_pylori_Shi470 1 1
Helicobacter_pylori_HPAG1 1 1
Helicobacter_pylori_51 1 1
Helicobacter_pylori_F32 1 1
Helicobacter_pylori_J99 1 1
Helicobacter_pylori_26695 1 1
Helicobacter_pylori_26695 1 1
Desulfocapsa_sulfexigens_DSM_10523 1 1
Desulfobacula_toluolica_Tol2 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4 4
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 1 1
Sorangium_cellulosum_So0157-2 3 3
Anaeromyxobacter_sp._K 1 1
Anaeromyxobacter_dehalogenans_2CP-C 1 1
Myxococcus_stipitatus_DSM_14675 1 1
Burkholderia_phenoliruptrix_BR3459a 1 1
Ralstonia_pickettii_12J 1 1
Ralstonia_solanacearum_FQY_4 2 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 3 3
Ralstonia_solanacearum_CMR15 2 2
Ralstonia_solanacearum_GMI1000 2 2
Burkholderia_sp._YI23 1 1
Burkholderia_sp._CCGE1003 1 1
Burkholderia_sp._CCGE1001 1 1
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 2 2
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 2 2
Burkholderia_ambifaria_MC40-6 3 3
Burkholderia_cenocepacia_MC0-3 2 2
Burkholderia_cenocepacia_AU_1054 2 2
Burkholderia_cenocepacia_J2315 1 1
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 2 2
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Variovorax_paradoxus_B4 1 1
Variovorax_paradoxus_EPS 1 1
Nitrosomonas_sp._AL212 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Phaeobacter_gallaeciensis_DSM_26640 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Candidatus_Pelagibacter_ubique_HTCC1062 1 1
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM1325 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 2 2
Vibrio_fischeri_ES114 1 1
Vibrio_sp._EJY3 3 3
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 2 2
Vibrio_nigripulchritudo_VibrioScope 2 2
Vibrio_vulnificus_CMCP6 4 4
Vibrio_vulnificus_YJ016 5 5
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Stenotrophomonas_maltophilia_R551-3 1 1
Thioflavicoccus_mobilis_8321 1 1
Proteus_mirabilis_BB2000 2 2
Edwardsiella_tarda_C07-087 2 2
Edwardsiella_tarda_FL6-60 2 2
Rahnella_aquatilis_HX2 2 2
Yersinia_pseudotuberculosis_PB1/+ 4 4
Yersinia_pseudotuberculosis_YPIII 4 4
Yersinia_pseudotuberculosis_IP_32953 4 4
Yersinia_pestis_biovar_Microtus_str._91001 4 4
Yersinia_pestis_A1122 4 4
Yersinia_pestis_Z176003 4 4
Yersinia_pestis_D182038 4 4
Yersinia_pestis_D106004 4 4
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 4 4
Yersinia_pestis_Nepal516 4 4
Yersinia_pestis_Antiqua 4 4
Yersinia_pestis_Angola 4 4
Yersinia_pestis_CO92 4 4
Yersinia_pestis_KIM10+ 4 4
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 4 4
Yersinia_enterocolitica_subsp._palearctica_Y11 4 4
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 1 1
Dickeya_dadantii_Ech586 3 3
Dickeya_dadantii_3937 3 3
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 2 2
Pantoea_ananatis_LMG_5342 3 3
Pantoea_ananatis_PA13 2 2
Pantoea_ananatis_AJ13355 1 1
Erwinia_pyrifoliae_DSM_12163 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Klebsiella_oxytoca_KCTC_1686 3 3
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Enterobacter_cloacae_SCF1 2 2
Azotobacter_vinelandii_CA6 2 2
Azotobacter_vinelandii_CA 2 2
Pseudomonas_denitrificans_ATCC_13867 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_DSM_10701 1 1
Pseudomonas_monteilii_SB3101 1 1
Pseudomonas_monteilii_SB3078 1 1
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_NBRC_14164 1 1
Pseudomonas_putida_DOT-T1E 2 2
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 1 1
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 2 2
Pseudomonas_putida_GB-1 2 2
Pseudomonas_protegens_CHA0 1 1
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_resinovorans_NBRC_106553 2 2
Pseudomonas_mendocina_NK-01 1 1
Pseudomonas_aeruginosa_SCV20265 2 2
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_RP73 2 2
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_DK2 2 2
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 1 1
Acinetobacter_junii__SH205 1 1
Haloarcula_hispanica_N601 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   1 1
Pan_troglodytes_69_2.1.4   (Chimpanzee)   1 1
Gorilla_gorilla_69_3.1   (Western gorilla)   1 1
Pongo_abelii_69_2   (Sumatran orangutan)   1 1
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   1 1
Macaca_mulatta_69_1   (Rhesus monkey)   1 1
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   1 1
Otolemur_garnettii_69_3   (Small-eared galago)   1 1
Microcebus_murinus_69_1   (Gray mouse lemur)   1 1
Rattus_norvegicus_69_3.4   (Norway rat)   2 2
Mus_musculus_69_38   (House mouse)   2 2
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   2 2
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   1 1
Cavia_porcellus_69_3   (Domestic guinea pig)   1 1
Oryctolagus_cuniculus_69_2   (Rabbit)   2 2
Sus_scrofa_69_10.2   (Pig)   1 1
Bos_taurus_69_3.1   (Cattle)   2 2
Vicugna_pacos_69_1   (Alpaca)   1 1
Tursiops_truncatus_69_1   (Bottlenose dolphin)   1 1
Mustela_putorius_furo_69_1.0   (Domestic ferret)   1 1
Ailuropoda_melanoleuca_69_1   (Giant panda)   1 1
Canis_familiaris_69_3.1   (Dog)   2 2
Felis_catus_69   (Domestic cat)   1 1
Equus_caballus_69_2   (Horse)   1 1
Myotis_lucifugus_69_2.0   (Little brown bat)   2 2
Pteropus_vampyrus_69_1   (Large flying fox)   1 1
Sorex_araneus_69_1   (European shrew)   1 1
Erinaceus_europaeus_69   (Western European hedgehog)   1 1
Procavia_capensis_69_1   (Cape rock hyrax)   1 1
Loxodonta_africana_69_3   (African savanna elephant)   1 1
Echinops_telfairi_69   (Small Madagascar hedgehog)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   1 1
Macropus_eugenii_69_1.0   (Tammar wallaby)   1 1
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   1 1
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   1 1
Ornithorhynchus_anatinus_69_5   (Platypus)   2 2
Petromyzon_marinus_69_7.0   (Sea lamprey)   1 1
Meleagris_gallopavo_69_2   (Turkey)   2 2
Gallus_gallus_69_2   (Chicken)   2 2
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   1 1
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   2 2
Anolis_carolinensis_69_2.0   (Green anole)   2 2
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   2 2
Latimeria_chalumnae_69_1   (Coelacanth)   2 2
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   2 2
Takifugu_rubripes_69_4   (Torafugu)   1 1
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   1 1
Oryzias_latipes_69_1   (Japanese medaka)   2 2
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   1 1
Oreochromis_niloticus_69_1.0   (Nile tilapia)   2 2
Danio_rerio_69_9   (Zebrafish)   2 2
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   1 1
Ciona_intestinalis_69   (Vase tunicate)   1 1

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   4 4
Homo_sapiens__(NCBI_version)   (Human)   2 2
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 2 2
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 39 39
Protozoadb_2010_08_(Protozoadb) 14 14
PDB_chains_(SCOP_1.75)_(PDB) 21 21
NCBI_viral_sequences_(Viral) 70 70
UniProt__viral_sequences_(Viral) 71 71
Protein_Data_Bank_(all_PDB_sequenc) 86 86
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 210 210
STRING_v9.0.5_(STRING) 581 580
TargetDB__(Targets) 27 27
Uniprot_2018_03_genome 17259 17214
NCBI_2017_08_genome 59723 59662

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