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Domain combinations for GTPase activation domain, GAP superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a GTPase activation domain, GAP domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   390 390
Pan_troglodytes_76_2.1.4   (Chimpanzee)   86 86
Gorilla_gorilla_76_3.1   (Western gorilla)   134 134
Pongo_abelii_76_2   (Sumatran orangutan)   97 97
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   95 95
Papio_anubis_76   (Olive baboon)   101 101
Macaca_mulatta_76_1   (Rhesus monkey)   176 176
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   221 221
Otolemur_garnettii_76_3   (Small-eared galago)   89 89
Microcebus_murinus_76_1   (Gray mouse lemur)   88 79
Rattus_norvegicus_76_5.0   (Norway rat)   153 127
Mus_musculus_76_38   (House mouse)   226 225
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   86 82
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   80 80
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   89 88
Cavia_porcellus_76_3   (Domestic guinea pig)   87 87
Oryctolagus_cuniculus_76_2   (Rabbit)   102 95
Ochotona_princeps_76   (American pika)   84 78
Tupaia_belangeri_76   (Northern tree shrew)   78 73
Sus_scrofa_76_10.2   (Pig)   119 119
Bos_taurus_76_3.1   (Cattle)   100 97
Ovis_aries_76_3.1   (Sheep)   104 104
Vicugna_pacos_76_1   (Alpaca)   58 56
Tursiops_truncatus_76_1   (Bottlenose dolphin)   88 86
Mustela_putorius_furo_76_1.0   (Domestic ferret)   88 88
Ailuropoda_melanoleuca_76_1   (Giant panda)   95 94
Canis_familiaris_76_3.1   (Dog)   130 128
Felis_catus_76_6.2   (Domestic cat)   93 93
Equus_caballus_76_2   (Horse)   112 112
Myotis_lucifugus_76_2.0   (Little brown bat)   91 91
Pteropus_vampyrus_76_1   (Large flying fox)   92 90
Sorex_araneus_76_1   (European shrew)   75 68
Erinaceus_europaeus_76   (Western European hedgehog)   72 70
Procavia_capensis_76_1   (Cape rock hyrax)   92 88
Loxodonta_africana_76_3   (African savanna elephant)   149 148
Echinops_telfairi_76   (Small Madagascar hedgehog)   81 76
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   105 104
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   56 54
Macropus_eugenii_76_1.0   (Tammar wallaby)   94 85
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   111 111
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   94 94
Ornithorhynchus_anatinus_76_5   (Platypus)   95 95
Saccoglossus_kowalevskii_v3.0 64 64
Petromyzon_marinus_76_7.0   (Sea lamprey)   42 42
Meleagris_gallopavo_76_2   (Turkey)   94 94
Gallus_gallus_76_4   (Chicken)   96 95
Anas_platyrhynchos_76_1.0   (Mallard)   91 91
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   91 91
Ficedula_albicollis_76_1.0   (Collared flycatcher)   87 86
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   99 99
Anolis_carolinensis_76_2.0   (Green anole)   89 89
Xenopus_laevis_   (African clawed frog)   115 115
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   110 110
Latimeria_chalumnae_76_1   (Coelacanth)   108 108
Lepisosteus_oculatus_76   (Spotted gar)   135 135
Gadus_morhua_76_1   (Atlantic cod)   124 120
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   156 156
Takifugu_rubripes_76_4   (Torafugu)   456 456
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   130 130
Oryzias_latipes_76_1   (Japanese medaka)   128 128
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   122 121
Poecilia_formosa_76   (Amazon molly)   126 126
Oreochromis_niloticus_76_1.0   (Nile tilapia)   172 172
Astyanax_mexicanus_76   (Mexican tetra)   126 126
Danio_rerio_76_9   (Zebrafish)   205 205
Oikopleura_dioica 32 32
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   68 68
Ciona_intestinalis_76   (Vase tunicate)   37 37
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   69 61
Adineta_vaga 72 72
Octopus_bimaculoides_280 58 58
Crassostrea_gigas_22   (Pacific oyster)   33 33
Lottia_gigantea_   (Owl limpet)   37 36
Helobdella_robusta_ 64 63
Capitella_sp._I_ 40 40
Danaus_plexippus_OGS1.0   (Monarch butterfly)   37 35
Heliconius_melpomene_   (Postman butterfly)   30 30
Bombyx_mori_   (Domestic silkworm)   31 30
Nasonia_vitripennis_   (Jewel wasp)   26 26
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   81 81
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   32 32
Linepithema_humile_v1.1   (Argentine ant)   37 37
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   33 33
Solenopsis_invicta_v.2.2.3   (Red fire ant)   31 30
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   32 32
Atta_cephalotes_v1.1 31 31
Camponotus_floridanus_v3.3   (Florida carpenter ant)   31 31
Lucilia_cuprina   (Australian sheep blowfly)   29 29
Drosophila_grimshawi_1.3 29 29
Drosophila_willistoni_1.3 29 29
Drosophila_pseudoobscura_2.13 29 29
Drosophila_persimilis_1.3 28 28
Drosophila_suzukii 33 30
Drosophila_yakuba_1.3 28 28
Drosophila_simulans_1.3 25 25
Drosophila_sechellia_1.3 28 28
Drosophila_melanogaster_76_5   (Fruit fly)   100 100
Drosophila_erecta_1.3 28 28
Drosophila_ananassae_1.3 28 28
Drosophila_virilis_1.2 28 28
Drosophila_mojavensis_1.3 28 28
Megaselia_scalaris_22 18 17
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   33 33
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   36 36
Anopheles_darlingi_22   (American malaria mosquito)   23 23
Anopheles_gambiae_49_3j   (African malaria mosquito)   29 29
Tribolium_castaneum_3.0   (Red flour beetle)   32 31
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   34 34
Acyrthosiphon_pisum_   (Pea aphid)   28 28
Rhodnius_prolixus_22 31 31
Daphnia_pulex_   (Common water flea)   51 51
Strigamia_maritima_22 32 32
Sarcoptes_scabiei 31 31
Tetranychus_urticae_   (Two-spotted spider mite)   31 31
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   39 38
Pristionchus_pacificus_ 30 30
Meloidogyne_incognita_   (Southern root-knot nematode)   23 23
Meloidogyne_hapla_ 19 19
Onchocerca_volvulus_22 28 28
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   40 40
Caenorhabditis_japonica_ 26 26
Caenorhabditis_brenneri_ 35 35
Caenorhabditis_remanei_ 37 37
Caenorhabditis_elegans_76_235   (Roundworm)   81 81
Caenorhabditis_briggsae_2 30 30
Trichinella_spiralis_22 34 34
Hymenolepis_microstoma_ 37 36
Echinococcus_multilocularis_ 36 36
Echinococcus_granulosus_ 36 36
Taenia_solium_   (Pork tapeworm)   36 36
Schistosoma_mansoni_ 35 35
Mnemiopsis_leidyi   (Sea walnut)   33 32
Thelohanellus_kitauei 13 13
Acropora_digitifera_v1.0 37 37
Nematostella_vectensis_1.0   (Starlet sea anemone)   36 36
Hydra_vulgaris 37 37
Amphimedon_queenslandica 55 55
Trichoplax_adhaerens_ 30 30
Proterospongia_sp._ATCC_50818_ 42 42
Monosiga_brevicollis_ 45 45
Sphaeroforma_arctica_JP610_ 21 21
Capsaspora_owczarzaki_ATCC_30864_ 54 52
Conidiobolus_coronatus_NRRL28638_v1.0 17 17
Mortierella_verticillata_NRRL_6337_ 29 29
Phycomyces_blakesleeanus_ 43 43
Rhizopus_oryzae_RA_99-880_ 52 52
Mucor_circinelloides_ 45 45
Rhizomucor_miehei_CAU432_ 38 38
Malassezia_globosa_CBS_7966_ 24 24
Sporisorium_reilianum_22 16 16
Ustilago_maydis_ 15 15
Mixia_osmundae_IAM_14324_v1.0 13 13
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 19 19
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 18 18
Melampsora_laricis-populina_ 20 20
Rhodotorula_graminis_WP1_v1.0 16 16
Sporobolomyces_roseus_IAM_13481_ 16 16
Microbotryum_violaceum_22 20 20
Wallemia_sebi_v1.0 11 11
Sphaerobolus_stellatus_v1.0 18 18
Piloderma_croceum_F_1598_v1.0 18 18
Serpula_lacrymans_var._lacrymans_S7.9_ 15 15
Coniophora_puteana 17 17
Hydnomerulius_pinastri_v2.0 21 21
Paxillus_rubicundulus_Ve08.2h10_v1.0 18 18
Pisolithus_microcarpus_441_v1.0 18 18
Pisolithus_tinctorius_Marx_270_v1.0 18 18
Scleroderma_citrinum_Foug_A_v1.0 17 17
Coprinopsis_cinerea_okayama7_130_v3 20 20
Pleurotus_ostreatus_   (Oyster mushroom)   17 17
Amanita_thiersii_Skay4041_v1.0 17 17
Amanita_muscaria_Koide_v1.0   (Fly agaric)   17 17
Galerina_marginata_v1.0 19 19
Hebeloma_cylindrosporum_h7_v2.0 20 20
Laccaria_bicolor_S238N-H82_ 23 23
Agaricus_bisporus_var._bisporus_ 16 16
Schizophyllum_commune_ 17 17
Stereum_hirsutum_FP-91666_SS1__v1.0 19 19
Heterobasidion_annosum_ 17 17
Gloeophyllum_trabeumv1.0 17 17
Punctularia_strigosozonata_v1.0 16 16
Sebacina_vermifera_MAFF_305830_v1.0 18 18
Fomitiporia_mediterranea_v1.0 19 19
Tulasnella_calospora_AL13/4D_v1.0 21 21
Postia_placenta_ 25 25
Wolfiporia_cocos_MD-104_SS10__v1.0 17 17
Fomitopsis_pinicolav1.0 18 18
Fomitopsis_pinicola_FP-58527_SS1_v3.0 18 18
Phanerochaete_chrysosporium_RP-78_2.1 15 15
Dichomitus_squalens 17 17
Trametes_versicolor_v1.0 18 18
Tremella_mesenterica_   (Witches' butter)   15 15
Daldinia_eschscholzii_EC12_v1.0 13 13
Apiospora_montagnei_NRRL_25634_v1.0 13 13
Magnaporthe_poae_ATCC_64411_22 12 12
Magnaporthe_grisea_70-15_ 12 12
Podospora_anserina_ 14 14
Sporotrichum_thermophile_ATCC_42464_ 14 14
Thielavia_terrestris_NRRL_8126_ 13 13
Chaetomium_globosum_CBS_148.51_ 14 14
Neurospora_tetrasperma_ 13 13
Neurospora_discreta_FGSC_8579_ 14 14
Neurospora_crassa_OR74A_ 14 14
Cryphonectria_parasitica_   (Chestnut blight fungus)   12 12
Verticillium_albo-atrum_VaMs.102_ 12 12
Verticillium_dahliae_VdLs.17_ 11 11
Acremonium_alcalophilumv_1.0 12 12
Glomerella_graminicola_22 12 12
Fusarium_graminearum_ 12 12
Nectria_haematococca_mpVI_ 13 13
Fusarium_oxysporum_f._sp._lycopersici_4286_ 13 13
Fusarium_verticillioides_7600_ 11 11
Trichoderma_asperellum_CBS_433.97_v1.0 12 12
Trichoderma_atroviride_ 12 12
Trichoderma_citrinoviride_v1.0 12 12
Trichoderma_reesei_1.2 12 12
Trichoderma_virens_Gv29-8_ 12 12
Trichoderma_longibrachiatum_ATCC_18648_v1.0 12 12
Trichoderma_harzianum_CBS_226.95_v1.0 12 12
Amorphotheca_resinae_v1.0   (Creosote fungus)   12 12
Botrytis_cinerea_B05.10_ 12 12
Sclerotinia_sclerotiorum_ 13 13
Blumeria_graminis_22 13 13
Didymella_exigua_CBS_183.55_v1.0 11 11
Leptosphaeria_maculans_22 12 12
Setosphaeria_turcica_v1.0 11 11
Cochliobolus_miyabeanus_ATCC_44560_v1.0 11 11
Cochliobolus_victoriae_FI3_v1.0 11 11
Cochliobolus_carbonum_26-R-13_v1.0 11 11
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   9 9
Alternaria_brassicicola_ 9 9
Cochliobolus_lunatus_m118_v2.0 10 10
Pyrenophora_teres_f._teres_22 11 11
Pyrenophora_tritici-repentis_ 11 11
Stagonospora_nodorum_ 12 12
Mycosphaerella_graminicola_IPO323_ 10 10
Zasmidium_cellare_ATCC_36951_v1.0 11 11
Dothistroma_septosporum 11 11
Septoria_musiva_v1.0 11 11
Mycosphaerella_fijiensis_CIRAD86_ 10 10
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 11 11
Paracoccidioides_brasiliensis_Pb18_ 10 10
Coccidioides_posadasii_RMSCC_3488_ 11 11
Coccidioides_immitis_RS_ 11 11
Ajellomyces_dermatitidis_SLH14081_ 10 10
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 10 10
Microsporum_canis_CBS_113480_ 10 10
Trichophyton_equinum_CBS_127.97_ 10 10
Trichophyton_verrucosum_HKI_0517_ 10 10
Arthroderma_benhamiae_CBS_112371_ 10 10
Trichophyton_tonsurans_CBS_112818_ 10 10
Trichophyton_rubrum_CBS_118892_ 10 10
Uncinocarpus_reesii_1704_ 11 11
Aspergillus_zonatus_v1.0 10 10
Penicillium_chrysogenum_Wisconsin_54-1255_ 11 11
Penicillium_chrysogenum_v1.0 10 10
Aspergillus_acidus_v1.0 10 10
Aspergillus_fumigatus_Af293 10 10
Aspergillus_brasiliensis_v1.0 10 10
Aspergillus_nidulans_FGSC_A4_ 10 10
Aspergillus_sydowii_v1.0 10 10
Aspergillus_versicolor_v1.0 11 11
Aspergillus_glaucus 11 11
Aspergillus_carbonarius_ITEM_5010_ 10 10
Neosartorya_fischeri_NRRL_181_ 10 10
Aspergillus_terreus_NIH2624_ 10 10
Aspergillus_tubingensis_v1.0 10 10
Aspergillus_wentii_v1.0 10 10
Aspergillus_oryzae_RIB40_ 10 10
Aspergillus_niger_22 10 10
Aspergillus_niger_ATCC_1015_ 10 10
Aspergillus_flavus_NRRL3357_ 10 10
Aspergillus_clavatus_NRRL_1_ 10 10
Penicillium_marneffei_ATCC_18224_ 11 11
Tuber_melanosporum_Mel28_22 14 14
Tuber_melanosporum_Vittad_   (Perigord truffle)   14 14
Hansenula_polymorpha_v2.0 9 9
Dekkera_bruxellensis_CBS_2499_v2.0 10 10
Pichia_membranifaciensv1.0 10 10
Candida_tanzawaensis_NRRL_Y-17324__v1.0 12 12
Candida_dubliniensis_CD36_ 13 13
Candida_tropicalis_MYA-3404_ 12 12
Candida_parapsilosis_ 11 11
Candida_albicans_SC5314 12 12
Lodderomyces_elongisporus_NRRL_YB-4239_ 13 13
Babjeviella_inositovora_NRRL_Y-12698_v1.0 12 12
Pichia_stipitis_CBS_6054_ 12 12
Candida_guilliermondii_ATCC_6260_ 13 13
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 13 13
Debaromyces_hansenii 12 12
Wickerhamomyces_anomalus 13 13
Pichia_pastoris_GS115_ 11 11
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 9 9
Yarrowia_lipolytica_CLIB122 16 16
Candida_lusitaniae_ATCC_42720_ 13 13
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 13 13
Vanderwaltozyma_polyspora_DSM_70294_ 15 15
Candida_glabrata_CBS138 14 14
Kluyveromyces_thermotolerans_CBS_6340 12 12
Lachancea_kluyveri_ 12 12
Kluyveromyces_waltii 11 11
Ashbya_gossypii_ATCC_10895_ 10 10
Zygosaccharomyces_rouxii_ 11 11
Saccharomyces_mikatae_MIT 14 14
Saccharomyces_paradoxus_MIT 15 15
Saccharomyces_cerevisiae_76   (Baker's yeast)   15 15
Saccharomyces_bayanus_MIT 15 15
Kluyveromyces_lactis 11 11
Schizosaccharomyces_cryophilus_OY26_22 12 12
Schizosaccharomyces_octosporus_yFS286_ 12 12
Schizosaccharomyces_japonicus_yFS275_ 12 12
Schizosaccharomyces_pombe   (Fission yeast)   12 12
Catenaria_anguillulae_PL171_v1.0 25 23
Allomyces_macrogynus_ATCC_38327_ 40 40
Spizellomyces_punctatus_DAOM_BR117_ 27 26
Dictyostelium_discoideum 61 61
Dictyostelium_purpureum_ 59 59
Entamoeba_dispar_1.2 114 114
Entamoeba_invadens_1.2 153 153
Entamoeba_histolytica_1 119 119
Selaginella_moellendorffii_ 5 5
Pinus_taeda   (Loblolly pine)   3 3
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   11 11
Theobroma_cacao_B97-61/B2_v1   (Cacao)   7 7
Gossypium_raimondii_v221 56 56
Citrus_clementina_v165 7 7
Citrus_sinensis_v154   (Sweet orange)   21 21
Thellungiella_halophila_v173 12 12
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   19 19
Capsella_rubella_v183 10 10
Arabidopsis_lyrata_   (Lyrate rockcress)   15 15
Arabidopsis_thaliana_10   (Thale cress)   15 15
Carica_papaya_   (Papaya)   7 7
Medicago_truncatula_   (Barrel medic)   13 13
Phaseolus_vulgaris_v186   (French bean)   12 12
Glycine_max_v109   (Soybean)   24 24
Cucumis_sativus_v122   (Cucumber)   7 7
Fragaria_vesca_   (Wild strawberry)   6 6
Malus_domestica_v196   (Apple)   11 11
Prunus_persica_v139   (Peach)   9 9
Linum_usitatissimum_v200   (Flax)   14 14
Manihot_esculenta_v147   (Cassava)   12 12
Populus_trichocarpa_v156   (Black cottonwood)   15 15
Vitis_vinifera_   (Wine grape)   10 10
Mimulus_guttatus_v140   (Spotted monkey flower)   12 12
Solanum_lycopersicum_v.2.3   (Tomato)   9 9
Solanum_tuberosum_   (Potato)   11 11
Actinidia_chinensis_Hongyang_ 12 12
Aquilegia_coerulea_v195 17 17
Triticum_urartu_22 10 10
Triticum_aestivum_22   (Bread wheat)   35 35
Aegilops_tauschii_22 9 9
Brachypodium_distachyon_   (Stiff brome)   14 14
Oryza_barthii_22   (African wild rice)   20 20
Oryza_meridionalis_22 26 26
Oryza_glumaepatula_22 28 28
Oryza_glaberrima   (African rice)   6 6
Oryza_punctata_22 20 20
Oryza_nivara_22 21 21
Oryza_brachyantha_22   (Malo sina)   11 11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   18 18
Oryza_sativa_v193   (Rice)   18 18
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   20 20
Panicum_virgatum_v202   (Switchgrass)   25 25
Setaria_italica_v164   (Foxtail millet)   13 13
Zea_mays_subsp._mays_   (Maize)   24 24
Zea_mays_v181   (Maize)   28 28
Sorghum_bicolor_   (Sorghum)   12 12
Musa_balbisiana   (Balbis banana)   17 16
Musa_acuminata_22   (Wild Malaysian banana)   15 15
Amborella_trichopoda_22 6 6
Physcomitrella_patens 8 8
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 2 2
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 2 2
Volvox_carteri_v199 2 2
Chlamydomonas_reinhardtii_4.0 1 1
Ostreococcus_tauri_ 1 1
Micromonas_sp._RCC299_ 1 1
Micromonas_pusilla_CCMP1545_v3.0 2 2
Cyanidioschyzon_merolae_strain_10D_22 2 2
Cyanidioschyzon_merolae 2 2
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 78 67
Bigelowiella_natans_CCMP2755_22 33 33
Giardia_lamblia_2.3 3 3
Cyanophora_paradoxa_ 3 3
Leishmania_mexicana_2.4 1 1
Leishmania_major_strain_Friedlin_ 1 1
Leishmania_infantum_JPCM5_2.4 1 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 1 1
Trypanosoma_vivax_ 1 1
Trypanosoma_cruzi_strain_CL_Brener 1 1
Trypanosoma_congolense_2.4 1 1
Trypanosoma_brucei_gambiense_v4.1 1 1
Trypanosoma_brucei_TREU927_v4.1 1 1
Ectocarpus_siliculosus 4 4
Aureococcus_anophagefferens_ 2 2
Albugo_laibachii_22 16 16
Pythium_iwayamai_DAOM_BR242034_22 12 12
Pythium_arrhenomanes_ATCC_12531_22 11 10
Pythium_ultimum_v1.7-2 10 10
Pythium_aphanidermatum_DAOM_BR444_22 9 9
Pythium_irregulare_DAOM_BR486_22 9 9
Pythium_vexans_DAOM_BR484_22 9 9
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9 9
Phytophthora_sojae_1.1 9 9
Phytophthora_infestans_T30-4_ 10 10
Phytophthora_capsici_ 11 11
Hyaloperonospora_arabidopsidis_22 8 8
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 1 1
Paramecium_tetraurelia_ 15 15
Tetrahymena_thermophila_SB210_1_ 3 3
Ichthyophthirius_multifiliis_strain_G5_ 1 1
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 1 1
Toxoplasma_gondii_ME49 1 1
Toxoplasma_gondii_GT1 1 1
Babesia_bovis_T2Bo_ 2 2
Theileria_parva__ 1 1
Theileria_annulata 1 1
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 1 1
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 1 1
Plasmodium_berghei_ANKA_ 1 1
Naegleria_gruberi_ 36 36
Trichomonas_vaginalis_ 64 64
Guillardia_theta_CCMP2712_v1.0_ 9 9
Emiliania_huxleyi_CCMP1516_ 6 6
Parachlamydia_acanthamoebae_UV-7 1 1
Pseudovibrio_sp._FO-BEG1 1 1
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 1 1
Providencia_stuartii_MRSN_2154 1 1
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   136 134
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   75 75
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   34 34
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   27 27
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   59 59
Cryptococcus_neoformans_var._grubii_H99_ 13 13
Cryptococcus_neoformans_B-3501A_ 14 14
Cryptococcus_neoformans_JEC21_ 13 13
Paracoccidioides_brasiliensis_Pb01_ 10 10
Paracoccidioides_brasiliensis_Pb03_ 10 10
Coccidioides_posadasii_str._Silveira_ 11 11
Coccidioides_immitis_RMSCC_3703_ 10 10
Coccidioides_immitis_RMSCC_2394_ 11 11
Coccidioides_immitis_H538.4_ 11 11
Ajellomyces_dermatitidis_ER-3_ 10 10
Histoplasma_capsulatum_H143 11 11
Histoplasma_capsulatum_H88 10 10
Histoplasma_capsulatum_G186AR 10 10
Aspergillus_fumigatus_A1163_ 10 10
Candida_albicans_WO-1_ 13 13
Saccharomyces_cerevisiae_UC5 14 14
Saccharomyces_cerevisiae_PW5 11 11
Saccharomyces_cerevisiae_FL100 5 5
Saccharomyces_cerevisiae_CLIB324 3 3
Saccharomyces_cerevisiae_CBS7960 8 8
Saccharomyces_cerevisiae_YJM269 13 13
Saccharomyces_cerevisiae_T7 15 15
Saccharomyces_cerevisiae_FostersB 9 9
Saccharomyces_cerevisiae_FostersO 7 7
Saccharomyces_cerevisiae_VL3 6 6
Saccharomyces_cerevisiae_Vin13 11 11
Saccharomyces_cerevisiae_LalvinQA23 10 10
Saccharomyces_cerevisiae_AWRI796 9 9
Saccharomyces_cerevisiae_Sigma1278b 15 15
Saccharomyces_cerevisiae_W303 15 15
Saccharomyces_cerevisiae_JAY291 15 15
Saccharomyces_cerevisiae_AWRI1631 8 8
Saccharomyces_cerevisiae_YPS163 6 6
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 4 4
Saccharomyces_cerevisiae_CLIB215 11 11
Saccharomyces_cerevisiae_Y10 4 4
Saccharomyces_cerevisiae_YJM789_ 15 15
Saccharomyces_cerevisiae_YJM789 15 15
Saccharomyces_cerevisiae_RM11-1a 13 13
Saccharomyces_cerevisiae_RM11-1a_ 13 13
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   15 15
Schizosaccharomyces_pombe_972h-_ 12 12
Batrachochytrium_dendrobatidis_JEL423_ 22 21
Batrachochytrium_dendrobatidis_JAM81_ 18 18
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   7 7
Hordeum_vulgare_22   (Domesticated barley)   15 15
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   12 12
Trypanosoma_brucei_Lister_427_v4.1 1 1
Neospora_caninum_Nc-Liverpool_6.2 1 1
Plasmodium_falciparum_HB3_ 1 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 1 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 1 1
Legionella_pneumophila_2300/99_Alcoy 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   94 94
Pan_troglodytes_69_2.1.4   (Chimpanzee)   83 83
Gorilla_gorilla_69_3.1   (Western gorilla)   97 97
Pongo_abelii_69_2   (Sumatran orangutan)   91 91
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   82 82
Macaca_mulatta_69_1   (Rhesus monkey)   92 92
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   89 89
Otolemur_garnettii_69_3   (Small-eared galago)   86 86
Microcebus_murinus_69_1   (Gray mouse lemur)   88 79
Rattus_norvegicus_69_3.4   (Norway rat)   139 113
Mus_musculus_69_38   (House mouse)   90 89
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   85 81
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   79 79
Cavia_porcellus_69_3   (Domestic guinea pig)   86 86
Oryctolagus_cuniculus_69_2   (Rabbit)   93 88
Ochotona_princeps_69   (American pika)   84 78
Tupaia_belangeri_69   (Northern tree shrew)   78 73
Sus_scrofa_69_10.2   (Pig)   93 93
Bos_taurus_69_3.1   (Cattle)   93 90
Vicugna_pacos_69_1   (Alpaca)   57 55
Tursiops_truncatus_69_1   (Bottlenose dolphin)   86 84
Mustela_putorius_furo_69_1.0   (Domestic ferret)   88 88
Ailuropoda_melanoleuca_69_1   (Giant panda)   86 85
Canis_familiaris_69_3.1   (Dog)   93 91
Felis_catus_69   (Domestic cat)   88 81
Equus_caballus_69_2   (Horse)   87 87
Myotis_lucifugus_69_2.0   (Little brown bat)   90 90
Pteropus_vampyrus_69_1   (Large flying fox)   90 88
Sorex_araneus_69_1   (European shrew)   75 68
Erinaceus_europaeus_69   (Western European hedgehog)   72 70
Procavia_capensis_69_1   (Cape rock hyrax)   90 86
Loxodonta_africana_69_3   (African savanna elephant)   93 92
Echinops_telfairi_69   (Small Madagascar hedgehog)   81 76
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   70 64
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   56 54
Macropus_eugenii_69_1.0   (Tammar wallaby)   90 83
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   86 86
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   89 89
Ornithorhynchus_anatinus_69_5   (Platypus)   89 89
Petromyzon_marinus_69_7.0   (Sea lamprey)   40 40
Meleagris_gallopavo_69_2   (Turkey)   82 82
Gallus_gallus_69_2   (Chicken)   81 80
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   88 88
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   82 82
Anolis_carolinensis_69_2.0   (Green anole)   88 88
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   91 91
Latimeria_chalumnae_69_1   (Coelacanth)   92 92
Gadus_morhua_69_1   (Atlantic cod)   116 112
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   120 120
Takifugu_rubripes_69_4   (Torafugu)   118 118
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   113 113
Oryzias_latipes_69_1   (Japanese medaka)   104 104
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   121 120
Oreochromis_niloticus_69_1.0   (Nile tilapia)   121 121
Danio_rerio_69_9   (Zebrafish)   135 135
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   29 29
Ciona_intestinalis_69   (Vase tunicate)   34 34
Drosophila_melanogaster_69_5   (Fruit fly)   29 29
Caenorhabditis_elegans_69_215   (Roundworm)   30 30
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   15 15
Arabidopsis_thaliana_10   (Thale cress)   9 9

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   429 429
Homo_sapiens__(NCBI_version)   (Human)   154 154
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   91 90
Heliconius_numata__(Incomplete) 4 4
Loa_loa_v3.3_(Request)   (Eye worm)   29 29
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   34 34
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   23 23
Moniliophthora_perniciosa_FA553__(Genome_survey) 11 11
Encephalitozoon_intestinalis__(endoparasite) 4 4
Encephalitozoon_cuniculi_(endoparasite) 4 4
Lotus_japonicus__(Early_assembly) 11 11
Malus_x_domestica_(Duplicate)   (Apple)   11 11
Ricinus_communis__(Early_assembly)   (Castor bean)   8 8
Nicotiana_benthamiana_0.4.4_(Early_draft) 18 18
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   9 9
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   9 9
Phoenix_dactylifera__(Early_draft)   (Date palm)   11 9
Protein_Data_Bank_(all_PDB_sequenc) 98 98
Protozoadb_2010_08_(Protozoadb) 622 622
STRING_v9.0.5_(STRING) 4130 4071
Uniprot_2018_03_genome 48099 47808
NCBI_2017_08_genome 69189 68836
PDB_chains_(SCOP_1.75)_(PDB) 10 10
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 174 174
TargetDB__(Targets) 127 127

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