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Domain combinations for Ankyrin repeat superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Ankyrin repeat domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   1081 979
Pan_troglodytes_76_2.1.4   (Chimpanzee)   263 231
Gorilla_gorilla_76_3.1   (Western gorilla)   386 332
Pongo_abelii_76_2   (Sumatran orangutan)   274 236
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   267 232
Papio_anubis_76   (Olive baboon)   292 254
Macaca_mulatta_76_1   (Rhesus monkey)   450 397
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   616 539
Otolemur_garnettii_76_3   (Small-eared galago)   262 227
Microcebus_murinus_76_1   (Gray mouse lemur)   210 181
Rattus_norvegicus_76_5.0   (Norway rat)   326 280
Mus_musculus_76_38   (House mouse)   652 546
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   224 187
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   231 209
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   264 231
Cavia_porcellus_76_3   (Domestic guinea pig)   255 228
Oryctolagus_cuniculus_76_2   (Rabbit)   261 223
Ochotona_princeps_76   (American pika)   219 184
Tupaia_belangeri_76   (Northern tree shrew)   190 163
Sus_scrofa_76_10.2   (Pig)   296 258
Bos_taurus_76_3.1   (Cattle)   287 252
Ovis_aries_76_3.1   (Sheep)   290 251
Vicugna_pacos_76_1   (Alpaca)   170 138
Tursiops_truncatus_76_1   (Bottlenose dolphin)   233 200
Mustela_putorius_furo_76_1.0   (Domestic ferret)   251 217
Ailuropoda_melanoleuca_76_1   (Giant panda)   260 230
Canis_familiaris_76_3.1   (Dog)   356 305
Felis_catus_76_6.2   (Domestic cat)   257 226
Equus_caballus_76_2   (Horse)   295 254
Myotis_lucifugus_76_2.0   (Little brown bat)   242 210
Pteropus_vampyrus_76_1   (Large flying fox)   239 202
Sorex_araneus_76_1   (European shrew)   173 141
Erinaceus_europaeus_76   (Western European hedgehog)   190 158
Procavia_capensis_76_1   (Cape rock hyrax)   229 197
Loxodonta_africana_76_3   (African savanna elephant)   342 295
Echinops_telfairi_76   (Small Madagascar hedgehog)   209 179
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   303 259
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   151 125
Macropus_eugenii_76_1.0   (Tammar wallaby)   220 187
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   287 255
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   254 221
Ornithorhynchus_anatinus_76_5   (Platypus)   239 217
Saccoglossus_kowalevskii_v3.0 531 422
Petromyzon_marinus_76_7.0   (Sea lamprey)   136 112
Meleagris_gallopavo_76_2   (Turkey)   225 192
Gallus_gallus_76_4   (Chicken)   233 195
Anas_platyrhynchos_76_1.0   (Mallard)   226 195
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   227 195
Ficedula_albicollis_76_1.0   (Collared flycatcher)   222 191
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   263 225
Anolis_carolinensis_76_2.0   (Green anole)   239 205
Xenopus_laevis_   (African clawed frog)   281 244
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   286 250
Latimeria_chalumnae_76_1   (Coelacanth)   312 274
Lepisosteus_oculatus_76   (Spotted gar)   342 287
Gadus_morhua_76_1   (Atlantic cod)   292 256
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   374 321
Takifugu_rubripes_76_4   (Torafugu)   794 661
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   339 288
Oryzias_latipes_76_1   (Japanese medaka)   305 272
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   288 248
Poecilia_formosa_76   (Amazon molly)   301 255
Oreochromis_niloticus_76_1.0   (Nile tilapia)   396 327
Astyanax_mexicanus_76   (Mexican tetra)   318 277
Danio_rerio_76_9   (Zebrafish)   519 452
Oikopleura_dioica 147 125
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   218 170
Ciona_intestinalis_76   (Vase tunicate)   138 123
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   1379 658
Adineta_vaga 486 408
Octopus_bimaculoides_280 708 466
Crassostrea_gigas_22   (Pacific oyster)   442 344
Lottia_gigantea_   (Owl limpet)   219 207
Helobdella_robusta_ 180 169
Capitella_sp._I_ 474 456
Danaus_plexippus_OGS1.0   (Monarch butterfly)   126 108
Heliconius_melpomene_   (Postman butterfly)   103 84
Bombyx_mori_   (Domestic silkworm)   117 106
Nasonia_vitripennis_   (Jewel wasp)   145 108
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   228 186
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   109 91
Linepithema_humile_v1.1   (Argentine ant)   115 101
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   117 100
Solenopsis_invicta_v.2.2.3   (Red fire ant)   104 86
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   110 87
Atta_cephalotes_v1.1 127 112
Camponotus_floridanus_v3.3   (Florida carpenter ant)   134 110
Lucilia_cuprina   (Australian sheep blowfly)   113 92
Drosophila_grimshawi_1.3 111 92
Drosophila_willistoni_1.3 103 86
Drosophila_pseudoobscura_2.13 103 84
Drosophila_persimilis_1.3 98 85
Drosophila_suzukii 108 87
Drosophila_yakuba_1.3 97 83
Drosophila_simulans_1.3 82 73
Drosophila_sechellia_1.3 94 82
Drosophila_melanogaster_76_5   (Fruit fly)   322 245
Drosophila_erecta_1.3 102 83
Drosophila_ananassae_1.3 106 86
Drosophila_virilis_1.2 106 85
Drosophila_mojavensis_1.3 102 82
Megaselia_scalaris_22 44 43
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   159 117
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   175 136
Anopheles_darlingi_22   (American malaria mosquito)   97 81
Anopheles_gambiae_49_3j   (African malaria mosquito)   131 101
Tribolium_castaneum_3.0   (Red flour beetle)   181 141
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   125 101
Acyrthosiphon_pisum_   (Pea aphid)   134 105
Rhodnius_prolixus_22 151 119
Daphnia_pulex_   (Common water flea)   362 338
Strigamia_maritima_22 148 117
Sarcoptes_scabiei 82 68
Tetranychus_urticae_   (Two-spotted spider mite)   90 71
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   114 100
Pristionchus_pacificus_ 111 102
Meloidogyne_incognita_   (Southern root-knot nematode)   79 71
Meloidogyne_hapla_ 51 45
Onchocerca_volvulus_22 102 79
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   150 108
Caenorhabditis_japonica_ 102 87
Caenorhabditis_brenneri_ 159 136
Caenorhabditis_remanei_ 153 126
Caenorhabditis_elegans_76_235   (Roundworm)   218 167
Caenorhabditis_briggsae_2 107 88
Trichinella_spiralis_22 69 55
Hymenolepis_microstoma_ 136 118
Echinococcus_multilocularis_ 109 93
Echinococcus_granulosus_ 113 92
Taenia_solium_   (Pork tapeworm)   115 98
Schistosoma_mansoni_ 132 106
Mnemiopsis_leidyi   (Sea walnut)   191 162
Thelohanellus_kitauei 34 28
Acropora_digitifera_v1.0 405 318
Nematostella_vectensis_1.0   (Starlet sea anemone)   208 202
Hydra_vulgaris 340 307
Amphimedon_queenslandica 1545 1033
Trichoplax_adhaerens_ 121 112
Proterospongia_sp._ATCC_50818_ 236 209
Monosiga_brevicollis_ 216 203
Sphaeroforma_arctica_JP610_ 162 154
Capsaspora_owczarzaki_ATCC_30864_ 164 126
Conidiobolus_coronatus_NRRL28638_v1.0 32 28
Mortierella_verticillata_NRRL_6337_ 74 68
Phycomyces_blakesleeanus_ 46 43
Rhizopus_oryzae_RA_99-880_ 75 65
Mucor_circinelloides_ 41 37
Rhizomucor_miehei_CAU432_ 54 49
Malassezia_globosa_CBS_7966_ 28 28
Sporisorium_reilianum_22 18 18
Ustilago_maydis_ 18 18
Mixia_osmundae_IAM_14324_v1.0 17 17
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 16 16
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 16 16
Melampsora_laricis-populina_ 17 17
Rhodotorula_graminis_WP1_v1.0 18 18
Sporobolomyces_roseus_IAM_13481_ 13 13
Microbotryum_violaceum_22 22 22
Wallemia_sebi_v1.0 15 15
Sphaerobolus_stellatus_v1.0 91 87
Piloderma_croceum_F_1598_v1.0 81 77
Serpula_lacrymans_var._lacrymans_S7.9_ 34 34
Coniophora_puteana 27 25
Hydnomerulius_pinastri_v2.0 46 42
Paxillus_rubicundulus_Ve08.2h10_v1.0 57 54
Pisolithus_microcarpus_441_v1.0 27 25
Pisolithus_tinctorius_Marx_270_v1.0 34 33
Scleroderma_citrinum_Foug_A_v1.0 21 21
Coprinopsis_cinerea_okayama7_130_v3 137 97
Pleurotus_ostreatus_   (Oyster mushroom)   26 25
Amanita_thiersii_Skay4041_v1.0 29 25
Amanita_muscaria_Koide_v1.0   (Fly agaric)   52 49
Galerina_marginata_v1.0 88 81
Hebeloma_cylindrosporum_h7_v2.0 40 37
Laccaria_bicolor_S238N-H82_ 80 79
Agaricus_bisporus_var._bisporus_ 23 21
Schizophyllum_commune_ 31 30
Stereum_hirsutum_FP-91666_SS1__v1.0 41 41
Heterobasidion_annosum_ 44 43
Gloeophyllum_trabeumv1.0 33 32
Punctularia_strigosozonata_v1.0 22 22
Sebacina_vermifera_MAFF_305830_v1.0 35 34
Fomitiporia_mediterranea_v1.0 20 20
Tulasnella_calospora_AL13/4D_v1.0 36 34
Postia_placenta_ 49 45
Wolfiporia_cocos_MD-104_SS10__v1.0 35 32
Fomitopsis_pinicolav1.0 32 32
Fomitopsis_pinicola_FP-58527_SS1_v3.0 32 32
Phanerochaete_chrysosporium_RP-78_2.1 21 21
Dichomitus_squalens 19 19
Trametes_versicolor_v1.0 30 28
Tremella_mesenterica_   (Witches' butter)   16 16
Daldinia_eschscholzii_EC12_v1.0 101 82
Apiospora_montagnei_NRRL_25634_v1.0 171 146
Magnaporthe_poae_ATCC_64411_22 152 120
Magnaporthe_grisea_70-15_ 87 68
Podospora_anserina_ 127 93
Sporotrichum_thermophile_ATCC_42464_ 39 33
Thielavia_terrestris_NRRL_8126_ 51 45
Chaetomium_globosum_CBS_148.51_ 133 107
Neurospora_tetrasperma_ 63 50
Neurospora_discreta_FGSC_8579_ 57 45
Neurospora_crassa_OR74A_ 72 55
Cryphonectria_parasitica_   (Chestnut blight fungus)   69 61
Verticillium_albo-atrum_VaMs.102_ 84 67
Verticillium_dahliae_VdLs.17_ 105 84
Acremonium_alcalophilumv_1.0 28 26
Glomerella_graminicola_22 97 81
Fusarium_graminearum_ 133 108
Nectria_haematococca_mpVI_ 183 140
Fusarium_oxysporum_f._sp._lycopersici_4286_ 195 152
Fusarium_verticillioides_7600_ 153 115
Trichoderma_asperellum_CBS_433.97_v1.0 143 125
Trichoderma_atroviride_ 127 103
Trichoderma_citrinoviride_v1.0 74 64
Trichoderma_reesei_1.2 81 69
Trichoderma_virens_Gv29-8_ 120 107
Trichoderma_longibrachiatum_ATCC_18648_v1.0 85 72
Trichoderma_harzianum_CBS_226.95_v1.0 191 161
Amorphotheca_resinae_v1.0   (Creosote fungus)   40 37
Botrytis_cinerea_B05.10_ 90 72
Sclerotinia_sclerotiorum_ 68 54
Blumeria_graminis_22 20 20
Didymella_exigua_CBS_183.55_v1.0 71 66
Leptosphaeria_maculans_22 47 36
Setosphaeria_turcica_v1.0 66 59
Cochliobolus_miyabeanus_ATCC_44560_v1.0 90 80
Cochliobolus_victoriae_FI3_v1.0 96 88
Cochliobolus_carbonum_26-R-13_v1.0 88 84
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   60 55
Alternaria_brassicicola_ 51 43
Cochliobolus_lunatus_m118_v2.0 104 91
Pyrenophora_teres_f._teres_22 71 60
Pyrenophora_tritici-repentis_ 81 68
Stagonospora_nodorum_ 123 103
Mycosphaerella_graminicola_IPO323_ 54 49
Zasmidium_cellare_ATCC_36951_v1.0 75 71
Dothistroma_septosporum 41 40
Septoria_musiva_v1.0 34 34
Mycosphaerella_fijiensis_CIRAD86_ 33 33
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 30 29
Paracoccidioides_brasiliensis_Pb18_ 53 43
Coccidioides_posadasii_RMSCC_3488_ 62 47
Coccidioides_immitis_RS_ 62 49
Ajellomyces_dermatitidis_SLH14081_ 65 58
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 56 48
Microsporum_canis_CBS_113480_ 86 64
Trichophyton_equinum_CBS_127.97_ 62 53
Trichophyton_verrucosum_HKI_0517_ 64 51
Arthroderma_benhamiae_CBS_112371_ 64 50
Trichophyton_tonsurans_CBS_112818_ 65 54
Trichophyton_rubrum_CBS_118892_ 62 51
Uncinocarpus_reesii_1704_ 75 55
Aspergillus_zonatus_v1.0 60 51
Penicillium_chrysogenum_Wisconsin_54-1255_ 159 121
Penicillium_chrysogenum_v1.0 78 68
Aspergillus_acidus_v1.0 95 80
Aspergillus_fumigatus_Af293 84 68
Aspergillus_brasiliensis_v1.0 107 86
Aspergillus_nidulans_FGSC_A4_ 87 63
Aspergillus_sydowii_v1.0 165 130
Aspergillus_versicolor_v1.0 120 93
Aspergillus_glaucus 149 130
Aspergillus_carbonarius_ITEM_5010_ 84 75
Neosartorya_fischeri_NRRL_181_ 127 96
Aspergillus_terreus_NIH2624_ 137 98
Aspergillus_tubingensis_v1.0 99 81
Aspergillus_wentii_v1.0 142 121
Aspergillus_oryzae_RIB40_ 142 117
Aspergillus_niger_22 148 107
Aspergillus_niger_ATCC_1015_ 83 74
Aspergillus_flavus_NRRL3357_ 138 109
Aspergillus_clavatus_NRRL_1_ 59 50
Penicillium_marneffei_ATCC_18224_ 138 100
Tuber_melanosporum_Mel28_22 22 20
Tuber_melanosporum_Vittad_   (Perigord truffle)   516 417
Hansenula_polymorpha_v2.0 14 14
Dekkera_bruxellensis_CBS_2499_v2.0 17 17
Pichia_membranifaciensv1.0 15 15
Candida_tanzawaensis_NRRL_Y-17324__v1.0 16 16
Candida_dubliniensis_CD36_ 18 18
Candida_tropicalis_MYA-3404_ 17 17
Candida_parapsilosis_ 19 19
Candida_albicans_SC5314 18 18
Lodderomyces_elongisporus_NRRL_YB-4239_ 17 17
Babjeviella_inositovora_NRRL_Y-12698_v1.0 15 15
Pichia_stipitis_CBS_6054_ 16 16
Candida_guilliermondii_ATCC_6260_ 19 19
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 18 18
Debaromyces_hansenii 20 20
Wickerhamomyces_anomalus 16 16
Pichia_pastoris_GS115_ 15 15
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 15 14
Yarrowia_lipolytica_CLIB122 22 21
Candida_lusitaniae_ATCC_42720_ 19 19
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 16 16
Vanderwaltozyma_polyspora_DSM_70294_ 19 19
Candida_glabrata_CBS138 18 18
Kluyveromyces_thermotolerans_CBS_6340 18 18
Lachancea_kluyveri_ 17 17
Kluyveromyces_waltii 17 17
Ashbya_gossypii_ATCC_10895_ 17 17
Zygosaccharomyces_rouxii_ 18 18
Saccharomyces_mikatae_MIT 19 19
Saccharomyces_paradoxus_MIT 19 19
Saccharomyces_cerevisiae_76   (Baker's yeast)   20 20
Saccharomyces_bayanus_MIT 19 19
Kluyveromyces_lactis 18 18
Schizosaccharomyces_cryophilus_OY26_22 15 15
Schizosaccharomyces_octosporus_yFS286_ 15 15
Schizosaccharomyces_japonicus_yFS275_ 16 16
Schizosaccharomyces_pombe   (Fission yeast)   15 15
Catenaria_anguillulae_PL171_v1.0 127 119
Allomyces_macrogynus_ATCC_38327_ 76 72
Spizellomyces_punctatus_DAOM_BR117_ 56 54
Dictyostelium_discoideum 117 99
Dictyostelium_purpureum_ 88 83
Entamoeba_dispar_1.2 47 44
Entamoeba_invadens_1.2 58 50
Entamoeba_histolytica_1 49 45
Selaginella_moellendorffii_ 115 114
Pinus_taeda   (Loblolly pine)   125 122
Picea_abies   (Norway spruce)   54 53
Eucalyptus_grandis_v201   (Rose gum)   411 390
Theobroma_cacao_B97-61/B2_v1   (Cacao)   230 210
Gossypium_raimondii_v221 466 448
Citrus_clementina_v165 300 283
Citrus_sinensis_v154   (Sweet orange)   335 321
Thellungiella_halophila_v173 143 140
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   166 160
Capsella_rubella_v183 140 135
Arabidopsis_lyrata_   (Lyrate rockcress)   79 76
Arabidopsis_thaliana_10   (Thale cress)   162 158
Carica_papaya_   (Papaya)   91 89
Medicago_truncatula_   (Barrel medic)   258 236
Phaseolus_vulgaris_v186   (French bean)   194 181
Glycine_max_v109   (Soybean)   288 277
Cucumis_sativus_v122   (Cucumber)   152 151
Fragaria_vesca_   (Wild strawberry)   170 149
Malus_domestica_v196   (Apple)   356 335
Prunus_persica_v139   (Peach)   195 180
Linum_usitatissimum_v200   (Flax)   187 179
Manihot_esculenta_v147   (Cassava)   204 196
Populus_trichocarpa_v156   (Black cottonwood)   262 249
Vitis_vinifera_   (Wine grape)   225 199
Mimulus_guttatus_v140   (Spotted monkey flower)   145 141
Solanum_lycopersicum_v.2.3   (Tomato)   127 125
Solanum_tuberosum_   (Potato)   193 188
Actinidia_chinensis_Hongyang_ 205 193
Aquilegia_coerulea_v195 252 229
Triticum_urartu_22 160 154
Triticum_aestivum_22   (Bread wheat)   388 383
Aegilops_tauschii_22 198 184
Brachypodium_distachyon_   (Stiff brome)   145 142
Oryza_barthii_22   (African wild rice)   242 203
Oryza_meridionalis_22 195 167
Oryza_glumaepatula_22 242 221
Oryza_glaberrima   (African rice)   162 152
Oryza_punctata_22 192 168
Oryza_nivara_22 249 226
Oryza_brachyantha_22   (Malo sina)   126 119
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   286 275
Oryza_sativa_v193   (Rice)   277 267
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   148 135
Panicum_virgatum_v202   (Switchgrass)   279 268
Setaria_italica_v164   (Foxtail millet)   175 165
Zea_mays_subsp._mays_   (Maize)   162 158
Zea_mays_v181   (Maize)   191 187
Sorghum_bicolor_   (Sorghum)   156 151
Musa_balbisiana   (Balbis banana)   168 161
Musa_acuminata_22   (Wild Malaysian banana)   151 146
Amborella_trichopoda_22 89 86
Physcomitrella_patens 70 69
Coccomyxa_subellipsoidea_sp._C-169_v2 41 38
Asterochloris_sp._Cgr/DA1pho_v1.0 46 44
Chlorella_variabilis_sp._NC64A_ 129 121
Chlorella_vulgaris_ 50 47
Volvox_carteri_f._nagariensis_ 148 135
Volvox_carteri_v199 154 141
Chlamydomonas_reinhardtii_4.0 196 160
Ostreococcus_sp._RCC809_ 49 49
Ostreococcus_lucimarinus_CCE9901_ 70 68
Ostreococcus_tauri_ 65 64
Bathycoccus_prasinos_ 200 182
Micromonas_sp._RCC299_ 99 94
Micromonas_pusilla_CCMP1545_v3.0 144 134
Cyanidioschyzon_merolae_strain_10D_22 13 11
Cyanidioschyzon_merolae 13 11
Porphyridium_purpureum_02_2012 58 53
Thecamonas_trahens_ATCC_50062_ 349 259
Bigelowiella_natans_CCMP2755_22 393 378
Giardia_lamblia_2.3 728 464
Cyanophora_paradoxa_ 175 159
Leishmania_mexicana_2.4 44 33
Leishmania_major_strain_Friedlin_ 42 33
Leishmania_infantum_JPCM5_2.4 40 31
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 37 29
Trypanosoma_vivax_ 32 26
Trypanosoma_cruzi_strain_CL_Brener 38 30
Trypanosoma_congolense_2.4 39 33
Trypanosoma_brucei_gambiense_v4.1 37 30
Trypanosoma_brucei_TREU927_v4.1 37 31
Ectocarpus_siliculosus 523 463
Aureococcus_anophagefferens_ 214 193
Albugo_laibachii_22 145 134
Pythium_iwayamai_DAOM_BR242034_22 313 268
Pythium_arrhenomanes_ATCC_12531_22 217 198
Pythium_ultimum_v1.7-2 307 277
Pythium_aphanidermatum_DAOM_BR444_22 202 173
Pythium_irregulare_DAOM_BR486_22 257 218
Pythium_vexans_DAOM_BR484_22 244 211
Phytophthora_ramorum_1.1   (Sudden oak death agent)   242 207
Phytophthora_sojae_1.1 417 342
Phytophthora_infestans_T30-4_ 282 244
Phytophthora_capsici_ 201 187
Hyaloperonospora_arabidopsidis_22 91 82
Phaeodactylum_tricornutumCCAP_1055/1 90 89
Fragilariopsis_cylindrus 194 187
Thalassiosira_pseudonana_CCMP1335 94 94
Perkinsus_marinus_ATCC_50983_ 154 146
Paramecium_tetraurelia_ 290 267
Tetrahymena_thermophila_SB210_1_ 119 111
Ichthyophthirius_multifiliis_strain_G5_ 50 49
Cryptosporidium_hominis 20 19
Cryptosporidium_muris 22 21
Cryptosporidium_parvum_Iowa_II 22 21
Neospora_caninum 27 27
Toxoplasma_gondii_VEG 29 28
Toxoplasma_gondii_ME49 31 30
Toxoplasma_gondii_GT1 30 29
Babesia_bovis_T2Bo_ 20 20
Theileria_parva__ 10 10
Theileria_annulata 11 11
Plasmodium_falciparum_3D7_ 17 16
Plasmodium_vivax_SaI-1_7.0 18 16
Plasmodium_knowlesi_strain_H_ 17 16
Plasmodium_yoelii_ssp._yoelii_1_ 15 14
Plasmodium_chabaudi_ 18 16
Plasmodium_berghei_ANKA_ 18 16
Symbiodinium_minutum_clade_B1_v1.2 1192 1104
Naegleria_gruberi_ 171 162
Trichomonas_vaginalis_ 3658 3067
Guillardia_theta_CCMP2712_v1.0_ 503 483
Emiliania_huxleyi_CCMP1516_ 498 481
Thermobaculum_terrenum_ATCC_BAA-798 1 1
Leptolyngbya_sp._PCC_7376 5 4
Pseudanabaena_sp._PCC_7367 2 2
Acaryochloris_marina_MBIC11017 14 12
Synechocystis_sp._PCC_6803 2 1
Thermosynechococcus_sp._NK55 1 1
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_7502 1 1
Synechococcus_sp._PCC_6312 1 1
Synechococcus_elongatus_PCC_7942 1 1
Microcoleus_sp._PCC_7113 3 2
Trichodesmium_erythraeum_IMS101 5 4
Geitlerinema_sp._PCC_7407 3 2
Gloeocapsa_sp._PCC_7428 2 1
Microcystis_aeruginosa_NIES-843 2 1
Gloeobacter_violaceus_PCC_7421 3 3
Rivularia_sp._PCC_7116 7 6
Calothrix_sp._PCC_7507 3 3
Anabaena_variabilis_ATCC_29413 4 4
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 5 5
Nostoc_punctiforme_PCC_73102 3 2
Nostoc_sp._PCC_7120 3 3
Nostoc_sp._PCC_7524 3 3
Anabaena_sp._90 3 2
Conexibacter_woesei_DSM_14684 1 1
Slackia_heliotrinireducens_DSM_20476 4 4
Thermobispora_bispora_DSM_43833 1 1
Nakamurella_multipartita_DSM_44233 2 2
Modestobacter_marinus 1 1
Blastococcus_saxobsidens_DD2 2 2
Geodermatophilus_obscurus_DSM_43160 2 2
Kineococcus_radiotolerans_SRS30216 2 2
Catenulispora_acidiphila_DSM_44928 1 1
Stackebrandtia_nassauensis_DSM_44728 2 2
Frankia_alni_ACN14a 1 1
Thermobifida_fusca_YX 1 1
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 1 1
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 5 5
Kitasatospora_setae_KM-6054 3 3
Streptomyces_coelicolor_A3(2) 3 3
Streptomyces_sp._PAMC26508 5 5
Streptomyces_flavogriseus_ATCC_33331 6 6
Streptomyces_sp._SirexAA-E 2 2
Streptomyces_griseus_subsp._griseus_NBRC_13350 3 3
Streptomyces_bingchenggensis_BCW-1 4 4
Streptomyces_violaceusniger_Tu_4113 2 2
Streptomyces_avermitilis_MA-4680 2 2
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_scabiei_87.22 5 5
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 2 2
Actinosynnema_mirum_DSM_43827 1 1
Saccharomonospora_viridis_DSM_43017 3 3
Pseudonocardia_dioxanivorans_CB1190 1 1
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 3 3
Microlunatus_phosphovorus_NM-1 3 3
Verrucosispora_maris_AB-18-032 2 2
Micromonospora_sp._L5 1 1
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 2 2
Actinoplanes_sp._SE50/110 3 3
Actinoplanes_missouriensis_431 1 1
Segniliparus_rotundus_DSM_44985 2 2
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 1 1
Rhodococcus_jostii_RHA1 2 2
Rhodococcus_equi_103S 2 2
Rhodococcus_opacus_B4 1 1
Rhodococcus_erythropolis_PR4 2 2
Nocardia_cyriacigeorgica_GUH-2 2 2
Nocardia_farcinica_IFM_10152 1 1
Amycolicicoccus_subflavus_DQS3-9A1 1 1
Mycobacterium_abscessus_ATCC_19977 1 1
Mycobacterium_rhodesiae_NBB3 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Corynebacterium_aurimucosum_ATCC_700975 1 1
Corynebacterium_efficiens_YS-314 3 3
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_pseudotuberculosis_316 1 1
Corynebacterium_glutamicum_R 4 4
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 2 2
Kytococcus_sedentarius_DSM_20547 1 1
Beutenbergia_cavernae_DSM_12333 3 3
Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2
Intrasporangium_calvum_DSM_43043 1 1
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 2 2
Xylanimonas_cellulosilytica_DSM_15894 1 1
Arthrobacter_phenanthrenivorans_Sphe3 2 2
Arthrobacter_chlorophenolicus_A6 2 2
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Rothia_dentocariosa_ATCC_17931 1 1
Arthrobacter_sp._Rue61a 2 2
Arthrobacter_sp._FB24 2 2
Micrococcus_luteus_NCTC_2665 1 1
Herpetosiphon_aurantiacus_DSM_785 5 2
Deinococcus_gobiensis_I-0 5 5
Deinococcus_deserti_VCD115 3 3
Deinococcus_maricopensis_DSM_21211 2 2
Deinococcus_geothermalis_DSM_11300 1 1
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 3 3
Oceanithermus_profundus_DSM_14977 4 3
Marinithermus_hydrothermalis_DSM_14884 1 1
Meiothermus_silvanus_DSM_9946 2 2
Meiothermus_ruber_DSM_1279 1 1
Veillonella_parvula_DSM_2008 1 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Clostridium_cellulolyticum_H10 2 2
Clostridium_thermocellum_ATCC_27405 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Ruminococcus_albus_7 1 1
Thermaerobacter_marianensis_DSM_12885 1 1
butyrate-producing_bacterium_SS3/4 1 1
butyrate-producing_bacterium_SM4/1 2 2
Desulfotomaculum_carboxydivorans_CO-1-SRB 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Filifactor_alocis_ATCC_35896 1 1
Clostridium_phytofermentans_ISDg 1 1
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Coprococcus_sp._ART55/1 1 1
Roseburia_intestinalis 2 2
Butyrivibrio_proteoclasticus_B316 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_beijerinckii_NCIMB_8052 2 2
Clostridium_acetobutylicum_ATCC_824 2 2
Acetohalobium_arabaticum_DSM_5501 6 3
Halothermothrix_orenii_H_168 2 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 2 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Enterococcus_sp._7L76 1 1
Enterococcus_hirae_ATCC_9790 1 1
Enterococcus_faecalis_62 1 1
Weissella_koreensis_KACC_15510 1 1
Lactobacillus_plantarum_JDM1 1 1
Lactococcus_garvieae_ATCC_49156 1 1
Streptococcus_sp._I-G2 1 1
Streptococcus_parasanguinis_ATCC_15912 1 1
Streptococcus_sanguinis_SK36 2 2
Exiguobacterium_sp._MH3 3 3
Exiguobacterium_sp._AT1b 1 1
Exiguobacterium_sibiricum_255-15 3 3
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 5 5
Paenibacillus_sp._JDR-2 3 3
Paenibacillus_mucilaginosus_3016 4 4
Paenibacillus_polymyxa_M1 4 4
Lysinibacillus_sphaericus_C3-41 4 4
Anoxybacillus_flavithermus_WK1 1 1
Bacillus_weihenstephanensis_KBAB4 5 5
Bacillus_thuringiensis_str._Al_Hakam 4 4
Bacillus_cereus_03BB102 4 4
Bacillus_anthracis_str._A0248 4 4
Bacillus_clausii_KSM-K16 1 1
Bacillus_cellulosilyticus_DSM_2522 1 1
Bacillus_megaterium_DSM_319 2 2
Gemmatimonas_aurantiaca_T-27 11 8
Chlorobium_chlorochromatii_CaD3 1 1
Chlorobium_phaeobacteroides_DSM_266 1 1
Haliscomenobacter_hydrossis_DSM_1100 4 4
Saprospira_grandis_str._Lewin 2 2
Niastella_koreensis_GR20-10 5 4
Chitinophaga_pinensis_DSM_2588 6 6
Salinibacter_ruber_M8 1 1
Candidatus_Amoebophilus_asiaticus_5a2 69 46
Candidatus_Cardinium_hertigii 24 20
Marivirga_tractuosa_DSM_4126 3 3
Fibrella_aestuarina 1 1
Leadbetterella_byssophila_DSM_17132 2 1
Dyadobacter_fermentans_DSM_18053 7 6
Spirosoma_linguale_DSM_74 1 1
Runella_slithyformis_DSM_19594 3 2
Prevotella_melaninogenica_ATCC_25845 2 2
Prevotella_intermedia_17 2 2
Bacteroides_salanitronis_DSM_18170 3 2
Bacteroides_fragilis_YCH46 2 2
Pedobacter_saltans_DSM_12145 7 6
Solitalea_canadensis_DSM_3403 6 6
Pedobacter_heparinus_DSM_2366 3 3
Sphingobacterium_sp._21 7 6
Fluviicola_taffensis_DSM_16823 3 3
Owenweeksia_hongkongensis_DSM_17368 4 3
Zunongwangia_profunda_SM-A87 2 2
Krokinobacter_sp._4H-3-7-5 5 3
Lacinutrix_sp._5H-3-7-4 4 3
Maribacter_sp._HTCC2170 2 2
Robiginitalea_biformata_HTCC2501 6 5
Croceibacter_atlanticus_HTCC2559 1 1
Aequorivita_sublithincola_DSM_14238 1 1
Zobellia_galactanivorans 5 4
Muricauda_ruestringensis_DSM_13258 2 2
Cellulophaga_algicola_DSM_14237 15 15
Cellulophaga_lytica_DSM_7489 9 8
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 3 2
Capnocytophaga_canimorsus_Cc5 3 2
Weeksella_virosa_DSM_16922 3 2
Flavobacterium_indicum_GPTSA100-9 3 2
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 2 2
Flavobacterium_columnare_ATCC_49512 3 2
Flavobacterium_johnsoniae_UW101 8 6
Fibrobacter_succinogenes_subsp._succinogenes_S85 3 2
Waddlia_chondrophila_WSU_86-1044 9 8
Candidatus_Protochlamydia_amoebophila_UWE25 7 6
Parachlamydia_acanthamoebae_UV-7 29 18
Simkania_negevensis_Z 16 13
Phycisphaera_mikurensis_NBRC_102666 5 4
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_brasiliensis_DSM_5305 5 4
Planctomyces_limnophilus_DSM_3776 3 3
Rhodopirellula_baltica_SH_1 10 9
Pirellula_staleyi_DSM_6068 2 2
Coraliomargarita_akajimensis_DSM_45221 4 4
Opitutus_terrae_PB90-1 2 2
Akkermansia_muciniphila_ATCC_BAA-835 3 3
Fretibacterium_fastidiosum 8 6
Turneriella_parva_DSM_21527 26 21
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 5 5
Leptospira_interrogans_serovar_Lai_str._IPAV 16 15
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 16 15
Brachyspira_murdochii_DSM_12563 57 48
Brachyspira_intermedia_PWS/A 68 57
Brachyspira_pilosicoli_95/1000 43 32
Brachyspira_hyodysenteriae_WA1 75 60
Borrelia_garinii_PBi 2 2
Borrelia_bissettii_DN127 2 2
Borrelia_afzelii_PKo 2 2
Borrelia_burgdorferi_B31 2 2
Borrelia_recurrentis_A1 3 3
Borrelia_duttonii_Ly 3 3
Borrelia_crocidurae_str._Achema 1 1
Borrelia_turicatae_91E135 1 1
Borrelia_hermsii_DAH 2 2
Spirochaeta_smaragdinae_DSM_11293 3 3
Sphaerochaeta_pleomorpha_str._Grapes 4 3
Sphaerochaeta_globus_str._Buddy 2 2
Sphaerochaeta_coccoides_DSM_17374 1 1
Spirochaeta_caldaria_DSM_7334 5 2
Treponema_azotonutricium_ZAS-9 8 5
Treponema_primitia_ZAS-2 4 2
Treponema_brennaborense_DSM_12168 4 2
Treponema_paraluiscuniculi_Cuniculi_A 4 2
Treponema_succinifaciens_DSM_2489 6 5
Treponema_pallidum_subsp._pallidum_SS14 8 4
Treponema_denticola_ATCC_35405 8 6
Spirochaeta_africana_DSM_8902 5 4
Spirochaeta_thermophila_DSM_6192 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Deferribacter_desulfuricans_SSM1 6 5
Marinitoga_piezophila_KA3 1 1
Mesotoga_prima_MesG1.Ag.4.2 2 1
Thermovibrio_ammonificans_HB-1 1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 1 1
Persephonella_marina_EX-H1 5 4
Elusimicrobium_minutum_Pei191 6 5
Candidatus_Chloracidobacterium_thermophilum_B 2 2
Candidatus_Solibacter_usitatus_Ellin6076 17 16
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 6 6
Candidatus_Koribacter_versatilis_Ellin345 4 4
Terriglobus_saanensis_SP1PR4 1 1
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 1 1
Candidatus_Nitrospira_defluvii 3 3
Streptobacillus_moniliformis_DSM_12112 1 1
Sebaldella_termitidis_ATCC_33386 2 2
Leptotrichia_buccalis_C-1013-b 2 2
Ilyobacter_polytropus_DSM_2926 2 2
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 4 3
Candidatus_Methylomirabilis_oxyfera 8 8
Acidithiobacillus_ferrivorans_SS3 1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1 1
Bacteriovorax_marinus_SJ 4 4
Bdellovibrio_bacteriovorus_HD100 4 4
Nitratifractor_salsuginis_DSM_16511 2 2
Sulfurospirillum_deleyianum_DSM_6946 3 3
Sulfurospirillum_barnesii_SES-3 1 1
Arcobacter_sp._L 7 5
Arcobacter_nitrofigilis_DSM_7299 4 3
Arcobacter_butzleri_RM4018 6 4
Campylobacter_hominis_ATCC_BAA-381 3 3
Campylobacter_lari_RM2100 2 2
Campylobacter_curvus_525.92 2 2
Campylobacter_concisus_13826 2 2
Campylobacter_jejuni_subsp._doylei_269.97 2 2
Campylobacter_sp._03-427 2 2
Campylobacter_fetus_subsp._fetus_82-40 2 2
uncultured_Sulfuricurvum_sp._RIFRC-1 5 5
Sulfuricurvum_kujiense_DSM_16994 5 5
Sulfurimonas_autotrophica_DSM_16294 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Helicobacter_hepaticus_ATCC_51449 14 13
Helicobacter_mustelae_12198 2 2
Helicobacter_cinaedi_PAGU611 3 3
Nitratiruptor_sp._SB155-2 2 2
Sulfurovum_sp._NBC37-1 1 1
Syntrophus_aciditrophicus_SB 2 2
Desulfomonile_tiedjei_DSM_6799 54 42
Syntrophobacter_fumaroxidans_MPOB 3 3
Desulfatibacillum_alkenivorans_AK-01 5 4
Desulfobacterium_autotrophicum_HRM2 2 2
Desulfococcus_oleovorans_Hxd3 7 5
Desulfomicrobium_baculatum_DSM_4028 2 2
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 2 1
Desulfovibrio_salexigens_DSM_2638 2 2
Hippea_maritima_DSM_10411 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_sp._M21 7 7
Geobacter_uraniireducens_Rf4 3 3
Geobacter_lovleyi_SZ 1 1
Geobacter_bemidjiensis_Bem 2 2
Geobacter_sulfurreducens_KN400 2 2
Geobacter_metallireducens_GS-15 6 5
Pelobacter_propionicus_DSM_2379 1 1
Babela_massiliensis 153 125
Stigmatella_aurantiaca_DW4/3-1 4 4
Corallococcus_coralloides_DSM_2259 6 6
Myxococcus_xanthus_DK_1622 7 7
Myxococcus_fulvus_HW-1 4 4
Dechloromonas_aromatica_RCB 6 6
Thauera_sp._MZ1T 6 6
Azoarcus_sp._KH32C 3 3
Azoarcus_sp._BH72 3 3
Aromatoleum_aromaticum_EbN1 2 2
Dechlorosoma_suillum_PS 4 4
Chromobacterium_violaceum_ATCC_12472 1 1
Neisseria_meningitidis_alpha14 1 1
Neisseria_meningitidis_FAM18 1 1
Neisseria_lactamica_020-06 2 2
Neisseria_gonorrhoeae_NCCP11945 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 5 5
beta_proteobacterium_CB 1 1
Methylibium_petroleiphilum_PM1 2 2
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 2 2
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_rhizoxinica_HKI_454 4 4
Burkholderia_phytofirmans_PsJN 2 2
Burkholderia_phymatum_STM815 3 3
Burkholderia_xenovorans_LB400 6 6
Ralstonia_eutropha_JMP134 3 3
Cupriavidus_taiwanensis_LMG_19424 3 3
Cupriavidus_metallidurans_CH34 3 3
Cupriavidus_necator_N-1 5 5
Ralstonia_eutropha_H16 3 3
Ralstonia_pickettii_12D 2 2
Ralstonia_solanacearum_CFBP2957 5 5
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 1 1
Burkholderia_sp._RPE64 3 3
Burkholderia_sp._CCGE1002 5 5
Burkholderia_thailandensis_E264 1 1
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Burkholderia_ambifaria_AMMD 1 1
Burkholderia_cenocepacia_HI2424 4 4
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_vietnamiensis_G4 40 37
Burkholderia_gladioli_BSR3 3 3
Burkholderia_glumae_BGR1 5 5
Verminephrobacter_eiseniae_EF01-2 2 2
Alicycliphilus_denitrificans_K601 1 1
Ramlibacter_tataouinensis_TTB310 3 3
Delftia_sp._Cs1-4 4 3
Delftia_acidovorans_SPH-1 4 3
Polaromonas_sp._JS666 2 2
Polaromonas_naphthalenivorans_CJ2 4 4
Variovorax_paradoxus_S110 2 2
Rhodoferax_ferrireducens_T118 2 2
Acidovorax_ebreus_TPSY 3 3
Acidovorax_sp._KKS102 6 6
Acidovorax_sp._JS42 3 3
Acidovorax_citrulli_AAC00-1 2 2
Acidovorax_avenae_subsp._avenae_ATCC_19860 3 3
Comamonas_testosteroni_CNB-2 3 3
Herminiimonas_arsenicoxydans 2 2
Collimonas_fungivorans_Ter331 2 2
Janthinobacterium_sp._Marseille 3 3
Herbaspirillum_seropedicae_SmR1 1 1
Pusillimonas_sp._T7-7 2 2
Advenella_kashmirensis_WT001 2 2
Taylorella_asinigenitalis_MCE3 1 1
Taylorella_equigenitalis_MCE9 2 2
Bordetella_petrii_DSM_12804 1 1
Bordetella_avium_197N 3 3
Bordetella_pertussis_Tohama_I 2 2
Bordetella_parapertussis_12822 2 2
Bordetella_bronchiseptica_RB50 2 2
Achromobacter_xylosoxidans_A8 3 3
Achromobacter_xylosoxidans 5 3
Thiobacillus_denitrificans_ATCC_25259 2 2
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 3 3
Nitrosomonas_eutropha_C91 2 2
Nitrosomonas_europaea_ATCC_19718 2 2
Sideroxydans_lithotrophicus_ES-1 6 6
Gallionella_capsiferriformans_ES-2 2 2
Methylotenera_versatilis_301 2 2
Methylotenera_mobilis_JLW8 3 3
Methylovorus_sp._MP688 2 2
Methylovorus_glucosetrophus_SIP3-4 3 3
Methylobacillus_flagellatus_KT 3 3
Magnetococcus_marinus_MC-1 7 5
Parvularcula_bermudensis_HTCC2503 1 1
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 1 1
Erythrobacter_litoralis_HTCC2594 1 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_sp._PP1Y 1 1
Novosphingobium_aromaticivorans_DSM_12444 1 1
Sphingobium_sp._SYK-6 3 2
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_sp._MM-1 1 1
Sphingomonas_wittichii_RW1 5 3
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 2 2
Phaeobacter_gallaeciensis_2.10 1 1
Pseudovibrio_sp._FO-BEG1 4 4
Jannaschia_sp._CCS1 1 1
Ruegeria_sp._TM1040 1 1
Ruegeria_pomeroyi_DSS-3 2 1
Ketogulonicigenium_vulgare_Y25 1 1
Ketogulonigenium_vulgarum_WSH-001 1 1
Paracoccus_denitrificans_PD1222 2 2
Rhodospirillum_photometricum_DSM_122 2 2
Magnetospirillum_magneticum_AMB-1 3 2
Rhodospirillum_centenum_SW 1 1
Azospirillum_lipoferum_4B 3 3
Azospirillum_sp._B510 2 2
Azospirillum_brasilense_Sp245 3 3
Gluconacetobacter_xylinus_NBRC_3288 2 2
Granulibacter_bethesdensis_CGDNIH1 2 2
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Gluconobacter_oxydans_621H 2 2
Acetobacter_pasteurianus_IFO_3283-01 2 2
Polymorphum_gilvum_SL003B-26A1 1 1
Micavibrio_aeruginosavorus_ARL-13 3 3
Candidatus_Midichloria_mitochondrii_IricVA 8 8
Neorickettsia_sennetsu_str._Miyayama 5 3
Neorickettsia_risticii_str._Illinois 4 4
Wolbachia_endosymbiont_of_Culex_quinquefasciatus_Pel 67 58
Wolbachia_sp._wRi 40 31
Ehrlichia_chaffeensis_str._Arkansas 11 5
Ehrlichia_canis_str._Jake 11 5
Ehrlichia_ruminantium_str._Gardel 9 5
Anaplasma_phagocytophilum_HZ 8 4
Anaplasma_marginale_str._Florida 6 3
Anaplasma_centrale_str._Israel 8 3
Orientia_tsutsugamushi_str._Boryong 40 37
Rickettsia_bellii_OSU_85-389 30 28
Rickettsia_canadensis_str._McKiel 4 4
Rickettsia_typhi_str._Wilmington 2 2
Rickettsia_prowazekii_str._BuV67-CWPP 3 3
Rickettsia_philipii_str._364D 9 8
Rickettsia_heilongjiangensis_054 12 11
Rickettsia_peacockii_str._Rustic 3 3
Rickettsia_felis_URRWXCal2 25 24
Rickettsia_slovaca_13-B 5 5
Rickettsia_parkeri_str._Portsmouth 9 9
Rickettsia_massiliae_MTU5 5 5
Rickettsia_japonica_YH 8 8
Rickettsia_africae_ESF-5 5 4
Rickettsia_rhipicephali_str._3-7-female6-CWPP 7 7
Rickettsia_montanensis_str._OSU_85-930 6 6
Candidatus_Rickettsia_amblyommii_str._GAT-30V 9 9
Rickettsia_australis_str._Cutlack 8 7
Rickettsia_akari_str._Hartford 7 7
Rickettsia_rickettsii_str._'Sheila_Smith' 7 6
Rickettsia_conorii_str._Malish_7 6 6
Xanthobacter_autotrophicus_Py2 2 2
Azorhizobium_caulinodans_ORS_571 3 2
Methylobacterium_chloromethanicum_CM4 1 1
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_sp._4-46 1 1
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 1 1
Methylobacterium_radiotolerans_JCM_2831 2 2
Parvibaculum_lavamentivorans_DS-1 1 1
Ochrobactrum_anthropi_ATCC_49188 1 1
Sinorhizobium_fredii_NGR234 2 2
Sinorhizobium_medicae_WSM419 3 2
Sinorhizobium_meliloti_AK83 1 1
Rhizobium_leguminosarum_bv._viciae_3841 1 1
Agrobacterium_tumefaciens_str._C58 1 1
Agrobacterium_radiobacter_K84 5 4
Agrobacterium_sp._H13-3 1 1
Agrobacterium_vitis_S4 2 2
Mesorhizobium_opportunistum_WSM2075 1 1
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2
Mesorhizobium_loti_MAFF303099 1 1
Methylocella_silvestris_BL2 2 2
Beijerinckia_indica_subsp._indica_ATCC_9039 2 2
Hyphomicrobium_sp._MC1 2 2
Hyphomicrobium_denitrificans_ATCC_51888 2 2
Oligotropha_carboxidovorans_OM4 2 2
Nitrobacter_hamburgensis_X14 1 1
Bradyrhizobium_japonicum_USDA_110 1 1
Bradyrhizobium_sp._ORS_278 3 3
Methylocystis_sp._SC2 1 1
Saccharophagus_degradans_2-40 1 1
Teredinibacter_turnerae_T7901 4 3
Cellvibrio_japonicus_Ueda107 1 1
Pasteurella_multocida_subsp._multocida_str._3480 1 1
Haemophilus_parainfluenzae_T3T1 1 1
Oceanimonas_sp._GK1 1 1
Vibrio_fischeri_MJ11 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Photobacterium_profundum_SS9 2 2
Ferrimonas_balearica_DSM_9799 1 1
Shewanella_piezotolerans_WP3 2 2
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 3 3
Shewanella_sediminis_HAW-EB3 2 2
Shewanella_denitrificans_OS217 2 2
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 3 2
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 5 5
Shewanella_sp._MR-4 3 2
Shewanella_amazonensis_SB2B 4 2
Shewanella_violacea_DSS12 1 1
Shewanella_frigidimarina_NCIMB_400 3 3
Shewanella_putrefaciens_CN-32 1 1
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 1 1
Pseudoalteromonas_haloplanktis_TAC125 2 2
Glaciecola_sp._4H-3-7+YE-5 1 1
Glaciecola_nitratireducens_FR1064 1 1
Marinobacter_adhaerens_HP15 3 3
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 2
Marinobacter_aquaeolei_VT8 3 3
Alteromonas_sp._SN2 1 1
Hahella_chejuensis_KCTC_2396 6 6
Alcanivorax_borkumensis_SK2 1 1
Marinomonas_posidonica_IVIA-Po-181 3 1
Marinomonas_mediterranea_MMB-1 1 1
Chromohalobacter_salexigens_DSM_3043 1 1
Methylomicrobium_alcaliphilum 2 2
Methylomonas_methanica_MC09 3 3
Methylococcus_capsulatus_str._Bath 4 3
Dichelobacter_nodosus_VCS1703A 2 2
Rhodanobacter_denitrificans 2 1
Frateuria_aurantia_DSM_6220 2 1
Pseudoxanthomonas_spadix_BD-a59 5 4
Pseudoxanthomonas_suwonensis_11-1 2 1
Stenotrophomonas_maltophilia_K279a 8 7
Xylella_fastidiosa_M23 2 1
Xanthomonas_axonopodis_pv._citri_str._306 6 4
Xanthomonas_albilineans_GPE_PC73 4 3
Xanthomonas_oryzae_pv._oryzae_PXO99A 4 2
Xanthomonas_campestris_pv._campestris_str._B100 8 7
Halothiobacillus_neapolitanus_c2 2 2
Alkalilimnicola_ehrlichii_MLHE-1 1 1
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Thioalkalivibrio_sp._K90mix 1 1
Halorhodospira_halophila_SL1 3 2
Allochromatium_vinosum_DSM_180 3 3
Thiocystis_violascens_DSM_198 3 3
Coxiella_burnetii_Dugway_5J108-111 21 16
Legionella_longbeachae_NSW150 31 26
Legionella_pneumophila_str._Corby 20 17
gamma_proteobacterium_HdN1 2 2
Photorhabdus_asymbiotica 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 2 2
Xenorhabdus_bovienii_SS-2004 1 1
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 3 3
Edwardsiella_tarda_EIB202 1 1
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Yersinia_enterocolitica_subsp._enterocolitica_8081 1 1
Serratia_sp._AS12 1 1
Serratia_plymuthica_AS9 1 1
Serratia_proteamaculans_568 2 2
Dickeya_zeae_Ech1591 5 5
Pectobacterium_wasabiae_WPP163 11 10
Pectobacterium_sp._SCC3193 11 11
Pectobacterium_atrosepticum_SCRI1043 3 3
Pectobacterium_carotovorum_subsp._carotovorum_PC1 3 3
Sodalis_glossinidius_str._'morsitans' 1 1
Erwinia_tasmaniensis_Et1/99 2 2
Erwinia_sp._Ejp617 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 1 1
Escherichia_blattae_DSM_4481 1 1
Cronobacter_turicensis_z3032 2 2
Cronobacter_sakazakii_ES15 1 1
Shigella_sonnei_Ss046 3 3
Shigella_dysenteriae_Sd197 3 3
Shigella_boydii_CDC_3083-94 3 3
Klebsiella_variicola_At-22 2 1
Klebsiella_pneumoniae_NTUH-K2044 2 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_fergusonii_ATCC_35469 2 2
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 2 2
Citrobacter_rodentium_ICC168 1 1
Azotobacter_vinelandii_DJ 2 2
Pseudomonas_sp._TKP 2 2
Pseudomonas_sp._UW4 1 1
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 2 2
Pseudomonas_entomophila_L48 2 2
Pseudomonas_syringae_pv._tomato_str._DC3000 2 2
Pseudomonas_stutzeri_A1501 2 2
Pseudomonas_fulva_12-X 2 2
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 5 5
Pseudomonas_fluorescens_SBW25 3 3
Pseudomonas_aeruginosa_UCBPP-PA14 3 3
Acinetobacter_oleivorans_DR1 3 3
Acinetobacter_calcoaceticus_PHEA-2 4 4
Acinetobacter_baumannii_ATCC_17978 4 4
Acinetobacter_sp._ADP1 2 2
Methylophaga_sp._JAM1 1 1
Thioalkalimicrobium_cyclicum_ALM1 1 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 5 5
Francisella_novicida_U112 3 3
Metallosphaera_cuprina_Ar-4 1 1
Acidianus_hospitalis_W1 1 1
Sulfolobus_islandicus_Y.N.15.51 2 2
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 3 1
Pyrobaculum_arsenaticum_DSM_13514 1 1
Pyrobaculum_oguniense_TE7 9 6
Pyrobaculum_aerophilum_str._IM2 1 1
Methanocella_paludicola_SANAE 2 2
Methanosarcina_mazei_Go1 1 1
Methanosarcina_barkeri_str._Fusaro 1 1
Thermoplasma_volcanium_GSS1 1 1
Thermoplasma_acidophilum_DSM_1728 1 1
Halogeometricum_borinquense_DSM_11551 4 4
Methanothermococcus_okinawensis_IH1 1 1
Methanococcus_aeolicus_Nankai-3 1 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1 1
Acholeplasma_laidlawii_PG-8A 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   394 344
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   261 200
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   148 112
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   112 96
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   174 141
Cryptococcus_neoformans_var._grubii_H99_ 18 18
Cryptococcus_neoformans_B-3501A_ 18 18
Cryptococcus_neoformans_JEC21_ 15 15
Paracoccidioides_brasiliensis_Pb01_ 61 48
Paracoccidioides_brasiliensis_Pb03_ 53 40
Coccidioides_posadasii_str._Silveira_ 62 48
Coccidioides_immitis_RMSCC_3703_ 57 46
Coccidioides_immitis_RMSCC_2394_ 62 47
Coccidioides_immitis_H538.4_ 58 48
Ajellomyces_dermatitidis_ER-3_ 73 57
Histoplasma_capsulatum_H143 49 43
Histoplasma_capsulatum_H88 58 48
Histoplasma_capsulatum_G186AR 56 49
Aspergillus_fumigatus_A1163_ 88 73
Candida_albicans_WO-1_ 18 18
Saccharomyces_cerevisiae_UC5 12 12
Saccharomyces_cerevisiae_PW5 16 16
Saccharomyces_cerevisiae_FL100 11 11
Saccharomyces_cerevisiae_CLIB324 8 8
Saccharomyces_cerevisiae_CBS7960 16 16
Saccharomyces_cerevisiae_YJM269 16 16
Saccharomyces_cerevisiae_T7 19 19
Saccharomyces_cerevisiae_FostersB 16 16
Saccharomyces_cerevisiae_FostersO 16 16
Saccharomyces_cerevisiae_VL3 15 15
Saccharomyces_cerevisiae_Vin13 16 16
Saccharomyces_cerevisiae_LalvinQA23 17 17
Saccharomyces_cerevisiae_AWRI796 18 18
Saccharomyces_cerevisiae_Sigma1278b 19 19
Saccharomyces_cerevisiae_W303 20 20
Saccharomyces_cerevisiae_JAY291 19 19
Saccharomyces_cerevisiae_AWRI1631 10 10
Saccharomyces_cerevisiae_YPS163 10 10
Saccharomyces_cerevisiae_M22 7 7
Saccharomyces_cerevisiae_T73 7 7
Saccharomyces_cerevisiae_CLIB215 13 13
Saccharomyces_cerevisiae_Y10 5 5
Saccharomyces_cerevisiae_YJM789_ 20 20
Saccharomyces_cerevisiae_YJM789 20 20
Saccharomyces_cerevisiae_RM11-1a 19 19
Saccharomyces_cerevisiae_RM11-1a_ 19 19
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   20 20
Schizosaccharomyces_pombe_972h-_ 15 15
Batrachochytrium_dendrobatidis_JEL423_ 49 44
Batrachochytrium_dendrobatidis_JAM81_ 34 33
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   224 209
Hordeum_vulgare_22   (Domesticated barley)   248 236
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   224 209
Trypanosoma_brucei_Lister_427_v4.1 36 30
Neospora_caninum_Nc-Liverpool_6.2 27 27
Plasmodium_falciparum_HB3_ 16 14
Plasmodium_falciparum_Dd2_ 11 10
Chroococcidiopsis_thermalis_PCC_7203 5 4
Chamaesiphon_minutus_PCC_6605 7 4
Synechocystis_sp._PCC_6803_substr._PCC-P 2 1
Synechocystis_sp._PCC_6803_substr._PCC-N 2 1
Synechocystis_sp._PCC_6803_substr._GT-I 2 1
Synechocystis_sp._PCC_6803 2 1
Synechococcus_sp._JA-2-3B'a(2-13) 2 2
Synechococcus_sp._JA-3-3Ab 2 2
Synechococcus_sp._CC9605 1 1
Synechococcus_sp._PCC_7002 2 1
Synechococcus_elongatus_PCC_6301 1 1
Crinalium_epipsammum_PCC_9333 4 3
Oscillatoria_nigro-viridis_PCC_7112 8 6
Oscillatoria_acuminata_PCC_6304 3 2
Arthrospira_platensis_NIES-39 3 2
Cyanothece_sp._PCC_7822 2 1
Cyanothece_sp._PCC_7425 2 2
Cyanothece_sp._PCC_7424 3 2
Cyanothece_sp._ATCC_51142 3 3
Cyanobacterium_stanieri_PCC_7202 2 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 3 3
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2 1
Stanieria_cyanosphaera_PCC_7437 1 1
Calothrix_parietina_Calothrix_sp._PCC_6303 4 3
Cylindrospermum_stagnale_PCC_7417 5 4
Anabaena_cylindrica_PCC_7122 3 3
Frankia_sp._EuI1c 2 2
Nocardiopsis_alba_ATCC_BAA-2165 1 1
Streptomyces_albus_J1074 3 3
Streptomyces_rapamycinicus_NRRL_5491 3 3
Streptomyces_davawensis_JCM_4913 3 3
Streptomyces_fulvissimus_DSM_40593 4 4
Streptomyces_venezuelae_ATCC_10712 5 5
Streptomyces_collinus_Tu_365 3 3
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 1 1
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 2 2
Saccharothrix_espanaensis_DSM_44229 2 2
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 5 5
Actinoplanes_friuliensis_DSM_7358 5 5
Rhodococcus_pyridinivorans_SB3094 1 1
Rhodococcus_erythropolis_CCM2595 2 2
Nocardia_brasiliensis_ATCC_700358 2 2
Mycobacterium_sp._JDM601 2 2
Mycobacterium_abscessus_subsp._bolletii_50594 2 2
Mycobacterium_sp._KMS 2 2
Mycobacterium_sp._MCS 2 2
Mycobacterium_smegmatis_str._MC2_155 1 1
Mycobacterium_kansasii_ATCC_12478 1 1
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_callunae_DSM_20147 3 3
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 1 1
Corynebacterium_pseudotuberculosis_CIP_52.97 1 1
Corynebacterium_pseudotuberculosis_PAT10 1 1
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_glutamicum_MB001 4 4
Corynebacterium_glutamicum_SCgG2 4 4
Corynebacterium_glutamicum_SCgG1 4 4
Corynebacterium_glutamicum_ATCC_13032 4 4
Corynebacterium_glutamicum_ATCC_13032 4 4
Corynebacterium_glutamicum_ATCC_13032 4 4
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_241 1 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 1 1
Actinomyces_graevenitzii_C83_ 4 4
Chthonomonas_calidirosea_T49 6 6
Deinococcus_peraridilitoris_DSM_19664 1 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 2 2
Erysipelothrix_rhusiopathiae_SY1027 1 1
Clostridium_thermocellum_DSM_1313 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Roseburia_intestinalis_XB6B4 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 3 3
Clostridium_botulinum_E3_str._Alaska_E43 2 2
Clostridium_acetobutylicum_DSM_1731 2 2
Clostridium_acetobutylicum_EA_2018 2 2
Thermacetogenium_phaeum_DSM_12270 1 1
Halobacteroides_halobius_DSM_5150 1 1
Carnobacterium_maltaromaticum_LMA28 1 1
Enterococcus_mundtii_QU_25 1 1
Enterococcus_faecalis_str._Symbioflor_1 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Lactobacillus_plantarum_16 2 2
Lactobacillus_plantarum_ZJ316 2 2
Lactobacillus_plantarum_subsp._plantarum_ST-III 1 1
Lactobacillus_plantarum_subsp._plantarum_P-8 1 1
Lactobacillus_plantarum_WCFS1 1 1
Lactococcus_garvieae_Lg2 1 1
Streptococcus_oligofermentans_AS_1.3089 1 1
Streptococcus_parasanguinis_FW213 1 1
Exiguobacterium_antarcticum_B7 2 2
Paenibacillus_sp._Y412MC10 4 4
Paenibacillus_mucilaginosus_KNP414 3 3
Paenibacillus_mucilaginosus_K02 3 3
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 1 1
Paenibacillus_polymyxa_SC2 3 3
Paenibacillus_polymyxa_E681 1 1
Listeria_monocytogenes_M7 1 1
Listeria_monocytogenes_L99 1 1
Listeria_monocytogenes_HCC23 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 1 1
Bacillus_toyonensis_BCT-7112 4 4
Bacillus_thuringiensis_HD-771 5 5
Bacillus_thuringiensis_HD-789 4 4
Bacillus_thuringiensis_MC28 3 3
Bacillus_thuringiensis_serovar_chinensis_CT-43 5 5
Bacillus_thuringiensis_YBT-1518 3 3
Bacillus_thuringiensis_Bt407 5 5
Bacillus_thuringiensis_serovar_konkukian_str._97-27 5 5
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 4 4
Bacillus_thuringiensis_BMB171 4 4
Bacillus_thuringiensis_serovar_finitimus_YBT-020 4 4
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 5 5
Bacillus_cereus_FRI-35 4 4
Bacillus_cereus_biovar_anthracis_str._CI 3 3
Bacillus_cereus_AH820 3 3
Bacillus_cereus_AH187 2 2
Bacillus_cereus_B4264 4 4
Bacillus_cereus_G9842 4 4
Bacillus_cereus_Q1 3 3
Bacillus_cereus_F837/76 3 3
Bacillus_cereus_NC7401 2 2
Bacillus_cereus_E33L 5 5
Bacillus_cereus_ATCC_14579 4 4
Bacillus_cereus_ATCC_10987 3 3
Bacillus_anthracis_str._H9401 4 4
Bacillus_anthracis_str._CDC_684 4 4
Bacillus_anthracis_str._'Ames_Ancestor' 4 4
Bacillus_anthracis_str._Sterne 4 4
Bacillus_anthracis_str._Ames 4 4
Bacillus_megaterium_WSH-002 4 4
Bacillus_megaterium_QM_B1551 3 3
Salinibacter_ruber_DSM_13855 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Nonlabens_dokdonensis_DSW-6 2 2
Psychroflexus_torquis_ATCC_700755 5 4
Riemerella_anatipestifer_RA-CH-2 3 2
Riemerella_anatipestifer_RA-CH-1 2 1
Riemerella_anatipestifer_RA-GD 3 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 3 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 3 2
Singulisphaera_acidiphila_DSM_18658 9 6
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 8 8
Leptospira_interrogans_serovar_Lai_str._56601 16 15
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 14 13
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 16 15
Brachyspira_pilosicoli_WesB 41 31
Brachyspira_pilosicoli_B2904 43 33
Brachyspira_pilosicoli_P43/6/78 44 32
Borrelia_valaisiana_VS116 1 1
Borrelia_garinii_NMJW1 1 1
Borrelia_garinii_BgVir 2 2
Borrelia_afzelii_HLJ01 1 1
Borrelia_afzelii_PKo 2 2
Borrelia_burgdorferi_CA382 1 1
Borrelia_burgdorferi_JD1 2 2
Borrelia_burgdorferi_N40 2 2
Borrelia_burgdorferi_ZS7 2 2
Borrelia_miyamotoi_LB-2001 1 1
Treponema_pedis_str._T_A4 7 5
Treponema_pallidum_str._Fribourg-Blanc 4 2
Treponema_pallidum_subsp._pertenue_str._Gauthier 4 2
Treponema_pallidum_subsp._pertenue_str._CDC2 4 2
Treponema_pallidum_subsp._pertenue_str._SamoaD 4 2
Treponema_pallidum_subsp._pallidum_str._Mexico_A 4 2
Treponema_pallidum_subsp._pallidum_str._Chicago 4 2
Treponema_pallidum_subsp._pallidum_DAL-1 4 2
Treponema_pallidum_subsp._pallidum_str._Nichols 4 2
Spirochaeta_thermophila_DSM_6578 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 3 2
Fusobacterium_nucleatum_subsp._animalis_4_8 5 4
Acidithiobacillus_ferrooxidans_ATCC_23270 1 1
Bdellovibrio_exovorus_JSS 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 5 5
Arcobacter_butzleri_7h1h 6 4
Arcobacter_butzleri_ED-1 6 4
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 3 3
Campylobacter_jejuni_RM1221 2 2
Campylobacter_jejuni_subsp._jejuni_00-2544 3 3
Campylobacter_jejuni_subsp._jejuni_00-2538 3 3
Campylobacter_jejuni_subsp._jejuni_00-2426 2 2
Campylobacter_jejuni_subsp._jejuni_00-2425 3 3
Campylobacter_jejuni_subsp._jejuni_PT14 2 2
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2 2
Campylobacter_jejuni_subsp._jejuni_S3 3 3
Campylobacter_jejuni_subsp._jejuni_M1 3 3
Campylobacter_jejuni_subsp._jejuni_IA3902 2 2
Campylobacter_jejuni_subsp._jejuni_81116 3 3
Campylobacter_jejuni_subsp._jejuni_81-176 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 2 2
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 2
Campylobacter_coli_76339 2 2
Campylobacter_coli_15-537360 2 2
Campylobacter_coli_CVM_N29710 3 3
Desulfocapsa_sulfexigens_DSM_10523 2 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_desulfuricans_ND132 3 2
Geobacter_sp._M18 2 2
Geobacter_sulfurreducens_PCA 2 2
Sorangium_cellulosum_So0157-2 1 1
Myxococcus_stipitatus_DSM_14675 13 12
Neisseria_meningitidis_G2136 1 1
Neisseria_meningitidis_M04-240196 1 1
Neisseria_meningitidis_M01-240149 1 1
Neisseria_meningitidis_NZ-05/33 1 1
Neisseria_meningitidis_M01-240355 1 1
Neisseria_meningitidis_053442 1 1
Neisseria_meningitidis_Z2491 1 1
Neisseria_meningitidis_H44/76 1 1
Neisseria_meningitidis_alpha710 1 1
Neisseria_meningitidis_MC58 2 2
Neisseria_gonorrhoeae_TCDC-NG08107 1 1
Neisseria_gonorrhoeae_FA_1090 1 1
Burkholderia_phenoliruptrix_BR3459a 3 3
Pandoraea_pnomenusa_3kgm 6 5
Ralstonia_pickettii_12J 2 2
Ralstonia_solanacearum_FQY_4 3 3
Ralstonia_solanacearum_Po82 5 5
Ralstonia_solanacearum_PSI07 8 8
Ralstonia_solanacearum_CMR15 5 5
Ralstonia_solanacearum_GMI1000 5 5
Burkholderia_sp._YI23 3 3
Burkholderia_sp._CCGE1003 3 3
Burkholderia_sp._CCGE1001 2 2
Burkholderia_sp._KJ006 5 5
Burkholderia_thailandensis_MSMB121 1 1
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 1 1
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_lata 6 6
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cenocepacia_MC0-3 5 5
Burkholderia_cenocepacia_AU_1054 3 3
Burkholderia_cenocepacia_J2315 6 6
Burkholderia_multivorans_ATCC_17616 2 2
Burkholderia_cepacia_GG4 3 3
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 3 3
Alicycliphilus_denitrificans_BC 1 1
Variovorax_paradoxus_B4 2 2
Variovorax_paradoxus_EPS 4 4
Taylorella_asinigenitalis_14/45 1 1
Taylorella_equigenitalis_14/56 2 2
Taylorella_equigenitalis_ATCC_35865 2 2
Bordetella_pertussis_CS 2 2
Bordetella_parapertussis_18323 2 2
Bordetella_parapertussis_Bpp5 2 2
Bordetella_bronchiseptica_MO149 2 2
Bordetella_bronchiseptica_253 2 2
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 4 3
Nitrosomonas_sp._AL212 3 3
Sulfuricella_denitrificans_skB26 5 5
Caulobacter_crescentus_CB15 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1 1
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1 1
Phaeobacter_gallaeciensis_DSM_17395 1 1
Leisingera_methylohalidivorans_DSM_14336 1 1
Octadecabacter_arcticus_238 1 1
Paracoccus_aminophilus_JCM_7686 1 1
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Gluconobacter_oxydans_H24 3 3
Acetobacter_pasteurianus_386B 2 2
Acetobacter_pasteurianus_IFO_3283-12 2 2
Acetobacter_pasteurianus_IFO_3283-01-42C 2 2
Acetobacter_pasteurianus_IFO_3283-32 2 2
Acetobacter_pasteurianus_IFO_3283-26 2 2
Acetobacter_pasteurianus_IFO_3283-22 2 2
Acetobacter_pasteurianus_IFO_3283-07 2 2
Acetobacter_pasteurianus_IFO_3283-03 2 2
Micavibrio_aeruginosavorus_EPB 3 2
Wolbachia_endosymbiont_of_Drosophila_melanogaster 26 24
Wolbachia_endosymbiont_of_Onchocerca_ochengi_str._Adamawa_Cameroon 2 2
Wolbachia_endosymbiont_strain_TRS_of_Brugia_malayi 7 7
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 38 32
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 64 51
Ehrlichia_muris_AS145 12 5
Ehrlichia_ruminantium_str._Welgevonden 11 4
Ehrlichia_ruminantium_str._Welgevonden 11 4
Anaplasma_phagocytophilum_str._Dog2 8 4
Anaplasma_phagocytophilum_str._HZ2 8 4
Anaplasma_phagocytophilum_str._JM 8 4
Anaplasma_marginale_str._Gypsy_Plains 1 1
Anaplasma_marginale_str._St._Maries 7 3
Orientia_tsutsugamushi_str._Ikeda 49 47
Rickettsia_bellii_RML369-C 29 27
Rickettsia_canadensis_str._CA410 5 4
Rickettsia_typhi_str._B9991CWPP 2 2
Rickettsia_typhi_str._TH1527 2 2
Rickettsia_prowazekii_str._Breinl 3 3
Rickettsia_prowazekii_str._NMRC_Madrid_E 2 2
Rickettsia_prowazekii_str._RpGvF24 1 1
Rickettsia_prowazekii_str._GvV257 1 1
Rickettsia_prowazekii_str._Dachau 3 3
Rickettsia_prowazekii_str._Katsinyian 3 3
Rickettsia_prowazekii_str._Chernikova 3 3
Rickettsia_prowazekii_Rp22 3 3
Rickettsia_prowazekii_str._Madrid_E 3 3
Rickettsia_slovaca_str._D-CWPP 7 7
Rickettsia_massiliae_str._AZT80 7 6
Rickettsia_rickettsii_str._Arizona 7 6
Rickettsia_rickettsii_str._Brazil 7 6
Rickettsia_rickettsii_str._Hauke 7 6
Rickettsia_rickettsii_str._Colombia 7 6
Rickettsia_rickettsii__str._Hlp#2 7 6
Rickettsia_rickettsii_str._Hino 7 6
Rickettsia_rickettsii_str._Iowa 7 6
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Sinorhizobium_fredii_HH103 2 2
Sinorhizobium_meliloti_2011 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 2 2
Sinorhizobium_meliloti_SM11 1 1
Sinorhizobium_meliloti_BL225C 1 1
Sinorhizobium_meliloti_1021 1 1
Rhizobium_tropici_CIAT_899 4 3
Rhizobium_leguminosarum_bv._trifolii_WSM1325 3 3
Mesorhizobium_australicum_WSM2073 1 1
Hyphomicrobium_nitrativorans_NL23 2 2
Oligotropha_carboxidovorans_OM5 2 2
Oligotropha_carboxidovorans_OM5 2 2
Rhodopseudomonas_palustris_TIE-1 1 1
Bradyrhizobium_sp._S23321 1 1
Bradyrhizobium_sp._BTAi1 1 1
Bradyrhizobium_oligotrophicum_S58 2 2
Bradyrhizobium_japonicum_USDA_6 1 1
Mannheimia_haemolytica_USMARC_2286 2 2
Mannheimia_haemolytica_M42548 2 2
Mannheimia_haemolytica_D174 2 2
Mannheimia_haemolytica_D171 1 1
Mannheimia_haemolytica_D153 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-183 2 2
Mannheimia_haemolytica_USDA-ARS-USMARC-185 2 2
Pasteurella_multocida_subsp._multocida_str._HN06 1 1
Pasteurella_multocida_subsp._multocida_str._Pm70 1 1
Vibrio_fischeri_ES114 1 1
Vibrio_sp._EJY3 1 1
Vibrio_parahaemolyticus_BB22OP 1 1
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_nigripulchritudo_VibrioScope 3 3
Vibrio_vulnificus_CMCP6 2 2
Vibrio_vulnificus_YJ016 1 1
Vibrio_cholerae_LMA3984-4 1 1
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 1 1
Vibrio_cholerae_O1_str._2010EL-1786 1 1
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Shewanella_baltica_BA175 3 3
Shewanella_baltica_OS678 2 2
Shewanella_baltica_OS117 3 2
Shewanella_baltica_OS195 2 2
Shewanella_baltica_OS155 3 2
Shewanella_putrefaciens_200 1 1
Glaciecola_psychrophila_170 1 1
Alteromonas_macleodii_str._'English_Channel_673' 1 1
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 2 2
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 2 2
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 4 3
Stenotrophomonas_maltophilia_JV3 5 4
Stenotrophomonas_maltophilia_R551-3 4 3
Xylella_fastidiosa_subsp._fastidiosa_GB514 2 1
Xylella_fastidiosa_M12 2 1
Xylella_fastidiosa_Temecula1 2 1
Xylella_fastidiosa_9a5c 2 1
Xanthomonas_citri_subsp._citri_Aw12879 6 4
Xanthomonas_campestris_pv._vesicatoria_str._85-10 5 4
Xanthomonas_axonopodis_pv._citrumelo_F1 7 6
Xanthomonas_axonopodis_Xac29-1 3 3
Xanthomonas_oryzae_pv._oryzicola_BLS256 5 3
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 3 2
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 10 9
Xanthomonas_campestris_pv._campestris_str._8004 10 9
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 8 7
Thioalkalivibrio_nitratireducens_DSM_14787 5 4
Thioflavicoccus_mobilis_8321 3 3
Coxiella_burnetii_CbuK_Q154 10 10
Coxiella_burnetii_CbuG_Q212 10 9
Coxiella_burnetii_RSA_331 14 13
Coxiella_burnetii_RSA_493 9 9
Legionella_pneumophila_str._Paris 26 21
Legionella_pneumophila_str._Lens 21 19
Legionella_pneumophila_subsp._pneumophila_LPE509 16 15
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 16 15
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 16 15
Legionella_pneumophila_subsp._pneumophila 17 17
Legionella_pneumophila_subsp._pneumophila 22 19
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 15 15
Legionella_pneumophila_2300/99_Alcoy 21 17
Proteus_mirabilis_BB2000 1 1
Edwardsiella_tarda_C07-087 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 1 1
Yersinia_enterocolitica_subsp._palearctica_Y11 1 1
Serratia_sp._AS13 1 1
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 2 2
Serratia_marcescens_FGI94 7 7
Serratia_marcescens_WW4 3 3
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 3 3
Dickeya_dadantii_3937 3 3
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 5 5
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 2 2
Cronobacter_sakazakii_ATCC_BAA-894 2 2
Raoultella_ornithinolytica_B6 1 1
Shigella_sonnei_53G 5 5
Shigella_flexneri_2002017 4 4
Shigella_flexneri_2a_str._301 3 3
Shigella_dysenteriae_1617 3 3
Shigella_boydii_Sb227 2 2
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 1 1
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Klebsiella_pneumoniae_JM45 2 1
Klebsiella_pneumoniae_CG43 2 1
Klebsiella_pneumoniae_KCTC_2242 2 1
Klebsiella_pneumoniae_342 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 2 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 1 1
Escherichia_coli_E24377A 4 4
Escherichia_coli_E._coli_PMV-1 1 1
Escherichia_coli_JJ1886 1 1
Escherichia_coli_LY180 2 2
Escherichia_coli_APEC_O78 2 2
Escherichia_coli_O7:K1_str._CE10 2 2
Escherichia_coli_O104:H4_str._2009EL-2050 1 1
Escherichia_coli_O104:H4_str._2009EL-2071 1 1
Escherichia_coli_O104:H4_str._2011C-3493 1 1
Escherichia_coli_NA114 1 1
Escherichia_coli_P12b 3 3
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 1 1
Escherichia_coli_042 3 3
Escherichia_coli_Xuzhou21 3 3
Escherichia_coli_IHE3034 1 1
Escherichia_coli_UMNK88 2 2
Escherichia_coli_O83:H1_str._NRG_857C 1 1
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 1 1
Escherichia_coli_IAI39 2 2
Escherichia_coli_UMN026 3 3
Escherichia_coli_55989 1 1
Escherichia_coli_S88 1 1
Escherichia_coli_IAI1 1 1
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_DH1 3 3
Escherichia_coli_DH1 3 3
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 2 2
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 2 2
Escherichia_coli_APEC_O1 1 1
Escherichia_coli_O103:H2_str._12009 1 1
Escherichia_coli_UTI89 1 1
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 3 3
Escherichia_coli_O55:H7_str._RM12579 3 3
Escherichia_coli_O55:H7_str._CB9615 3 3
Escherichia_coli_O26:H11_str._11368 1 1
Escherichia_coli_CFT073 1 1
Escherichia_coli_O111:H-_str._11128 1 1
Escherichia_coli_O127:H6_str._E2348/69 1 1
Escherichia_coli_O157:H7_str._TW14359 4 4
Escherichia_coli_O157:H7_str._EC4115 4 4
Escherichia_coli_O157:H7_str._Sakai 3 3
Escherichia_coli_O157:H7_str._EDL933 3 3
Escherichia_coli_str._K-12_substr._MDS42 2 2
Escherichia_coli_BW2952 1 1
Escherichia_coli_str._K-12_substr._MG1655 2 2
Escherichia_coli_str._K-12_substr._W3110 2 2
Escherichia_coli_str._K-12_substr._DH10B 2 2
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 2 2
Enterobacter_cloacae_EcWSU1 2 2
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2 2
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 2 2
Azotobacter_vinelandii_CA6 2 2
Azotobacter_vinelandii_CA 2 2
Pseudomonas_denitrificans_ATCC_13867 2 2
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 3 3
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_10701 2 2
Pseudomonas_stutzeri_DSM_4166 2 2
Pseudomonas_stutzeri_RCH2 2 2
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 3 3
Pseudomonas_monteilii_SB3101 2 2
Pseudomonas_monteilii_SB3078 2 2
Pseudomonas_putida_H8234 2 2
Pseudomonas_putida_HB3267 2 2
Pseudomonas_putida_NBRC_14164 2 2
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_S16 2 2
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 2 2
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_KT2440 1 1
Pseudomonas_putida_GB-1 2 2
Pseudomonas_protegens_CHA0 6 6
Pseudomonas_poae_RE*1-1-14 2 2
Pseudomonas_fluorescens_F113 2 2
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 2 2
Pseudomonas_fluorescens_Pf0-1 1 1
Pseudomonas_resinovorans_NBRC_106553 1 1
Pseudomonas_aeruginosa_SCV20265 3 3
Pseudomonas_aeruginosa_MTB-1 3 3
Pseudomonas_aeruginosa_LES431 3 3
Pseudomonas_aeruginosa_RP73 3 3
Pseudomonas_aeruginosa_B136-33 3 3
Pseudomonas_aeruginosa_PA1R 3 3
Pseudomonas_aeruginosa_PA1 3 3
Pseudomonas_aeruginosa_DK2 3 3
Pseudomonas_aeruginosa_NCGM2.S1 3 3
Pseudomonas_aeruginosa_M18 3 3
Pseudomonas_aeruginosa_LESB58 3 3
Pseudomonas_aeruginosa_PA7 3 3
Pseudomonas_aeruginosa_PAO1 3 3
Acinetobacter_genomosp._13TU__RUH2624 2 2
Acinetobacter_sp.__SH024 3 3
Acinetobacter_calcoaceticus_ruh2202 2 2
Acinetobacter_baumannii_ZW85-1 4 4
Acinetobacter_baumannii_TYTH-1 3 3
Acinetobacter_baumannii_BJAB0868 3 3
Acinetobacter_baumannii_BJAB0715 3 3
Acinetobacter_baumannii_BJAB07104 3 3
Acinetobacter_baumannii_TCDC-AB0715 3 3
Acinetobacter_baumannii_D1279779 5 5
Acinetobacter_baumannii_MDR-TJ 3 3
Acinetobacter_baumannii_1656-2 4 4
Acinetobacter_baumannii__ATCC_19606 4 4
Acinetobacter_baumannii_AB307-0294 4 4
Acinetobacter_baumannii_AYE 3 3
Acinetobacter_baumannii_SDF 4 4
Acinetobacter_baumannii_MDR-ZJ06 3 3
Acinetobacter_baumannii_AB0057 3 3
Acinetobacter_baumannii_ACICU 4 4
Acinetobacter_radioresistens__SH164 3 3
Acinetobacter_junii__SH205 2 2
Acinetobacter_johnsonii__SH046 2 2
Acinetobacter_lwoffii__SH145 3 3
Methylophaga_sp._JAM7 1 1
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Methanosarcina_mazei_Tuc01 1 1
Halovivax_ruber_XH-70 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   329 290
Pan_troglodytes_69_2.1.4   (Chimpanzee)   258 226
Gorilla_gorilla_69_3.1   (Western gorilla)   274 238
Pongo_abelii_69_2   (Sumatran orangutan)   259 223
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   238 208
Macaca_mulatta_69_1   (Rhesus monkey)   255 224
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   285 240
Otolemur_garnettii_69_3   (Small-eared galago)   251 218
Microcebus_murinus_69_1   (Gray mouse lemur)   210 181
Rattus_norvegicus_69_3.4   (Norway rat)   257 224
Mus_musculus_69_38   (House mouse)   267 230
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   222 185
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   222 200
Cavia_porcellus_69_3   (Domestic guinea pig)   244 217
Oryctolagus_cuniculus_69_2   (Rabbit)   227 202
Ochotona_princeps_69   (American pika)   219 184
Tupaia_belangeri_69   (Northern tree shrew)   190 163
Sus_scrofa_69_10.2   (Pig)   245 212
Bos_taurus_69_3.1   (Cattle)   258 227
Vicugna_pacos_69_1   (Alpaca)   168 136
Tursiops_truncatus_69_1   (Bottlenose dolphin)   231 198
Mustela_putorius_furo_69_1.0   (Domestic ferret)   248 215
Ailuropoda_melanoleuca_69_1   (Giant panda)   242 213
Canis_familiaris_69_3.1   (Dog)   253 223
Felis_catus_69   (Domestic cat)   192 166
Equus_caballus_69_2   (Horse)   242 214
Myotis_lucifugus_69_2.0   (Little brown bat)   224 195
Pteropus_vampyrus_69_1   (Large flying fox)   237 200
Sorex_araneus_69_1   (European shrew)   173 141
Erinaceus_europaeus_69   (Western European hedgehog)   190 158
Procavia_capensis_69_1   (Cape rock hyrax)   227 195
Loxodonta_africana_69_3   (African savanna elephant)   243 215
Echinops_telfairi_69   (Small Madagascar hedgehog)   209 179
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   185 152
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   148 123
Macropus_eugenii_69_1.0   (Tammar wallaby)   218 185
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   229 203
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   244 212
Ornithorhynchus_anatinus_69_5   (Platypus)   220 200
Petromyzon_marinus_69_7.0   (Sea lamprey)   121 101
Meleagris_gallopavo_69_2   (Turkey)   202 173
Gallus_gallus_69_2   (Chicken)   207 176
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   223 191
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   220 190
Anolis_carolinensis_69_2.0   (Green anole)   224 193
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   246 216
Latimeria_chalumnae_69_1   (Coelacanth)   262 229
Gadus_morhua_69_1   (Atlantic cod)   265 229
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   279 243
Takifugu_rubripes_69_4   (Torafugu)   272 230
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   269 229
Oryzias_latipes_69_1   (Japanese medaka)   234 206
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   288 248
Oreochromis_niloticus_69_1.0   (Nile tilapia)   292 244
Danio_rerio_69_9   (Zebrafish)   322 278
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   101 83
Ciona_intestinalis_69   (Vase tunicate)   124 111
Drosophila_melanogaster_69_5   (Fruit fly)   102 84
Caenorhabditis_elegans_69_215   (Roundworm)   115 96
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   20 20
Arabidopsis_thaliana_10   (Thale cress)   124 120

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1163 1044
Homo_sapiens__(NCBI_version)   (Human)   476 415
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   269 231
Heliconius_numata__(Incomplete) 18 18
Loa_loa_v3.3_(Request)   (Eye worm)   109 94
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   112 103
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   86 69
Moniliophthora_perniciosa_FA553__(Genome_survey) 19 16
Encephalitozoon_intestinalis__(endoparasite) 2 2
Encephalitozoon_cuniculi_(endoparasite) 2 2
Picea_sitchensis__(Incomplete)   (Sitka spruce)   9 9
Lotus_japonicus__(Early_assembly) 83 83
Malus_x_domestica_(Duplicate)   (Apple)   356 335
Ricinus_communis__(Early_assembly)   (Castor bean)   133 122
Nicotiana_benthamiana_0.4.4_(Early_draft) 246 240
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   125 123
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   127 125
Phoenix_dactylifera__(Early_draft)   (Date palm)   65 63
Acholeplasma_laidlawii_PG-8A_(duplicate) 1 1
Wolbachia_endosymbiont_of_Brugia_malayi_v1.0_(Broad_Institute) 7 7
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 155 150
TargetDB__(Targets) 549 498
PDB_chains_(SCOP_1.75)_(PDB) 42 42
Protozoadb_2010_08_(Protozoadb) 9534 7765
STRING_v9.0.5_(STRING) 21856 18399
Uniprot_2018_03_genome 276064 232456
NCBI_2017_08_genome 356846 307091
Protein_Data_Bank_(all_PDB_sequenc) 894 860
UniProt__viral_sequences_(Viral) 982 834
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 1071 1069
NCBI_viral_sequences_(Viral) 1227 1060

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