SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for ENTH/VHS domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a ENTH/VHS domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   166 166
Pan_troglodytes_76_2.1.4   (Chimpanzee)   22 22
Gorilla_gorilla_76_3.1   (Western gorilla)   42 42
Pongo_abelii_76_2   (Sumatran orangutan)   28 28
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   31 31
Papio_anubis_76   (Olive baboon)   32 32
Macaca_mulatta_76_1   (Rhesus monkey)   51 51
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   79 79
Otolemur_garnettii_76_3   (Small-eared galago)   28 28
Microcebus_murinus_76_1   (Gray mouse lemur)   22 22
Rattus_norvegicus_76_5.0   (Norway rat)   30 30
Mus_musculus_76_38   (House mouse)   73 73
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   22 22
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   25 25
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   27 27
Cavia_porcellus_76_3   (Domestic guinea pig)   28 28
Oryctolagus_cuniculus_76_2   (Rabbit)   24 24
Ochotona_princeps_76   (American pika)   25 24
Tupaia_belangeri_76   (Northern tree shrew)   24 22
Sus_scrofa_76_10.2   (Pig)   26 26
Bos_taurus_76_3.1   (Cattle)   33 33
Ovis_aries_76_3.1   (Sheep)   32 32
Vicugna_pacos_76_1   (Alpaca)   15 15
Tursiops_truncatus_76_1   (Bottlenose dolphin)   26 26
Mustela_putorius_furo_76_1.0   (Domestic ferret)   25 25
Ailuropoda_melanoleuca_76_1   (Giant panda)   29 29
Canis_familiaris_76_3.1   (Dog)   38 38
Felis_catus_76_6.2   (Domestic cat)   30 30
Equus_caballus_76_2   (Horse)   30 30
Myotis_lucifugus_76_2.0   (Little brown bat)   28 28
Pteropus_vampyrus_76_1   (Large flying fox)   25 25
Sorex_araneus_76_1   (European shrew)   18 17
Erinaceus_europaeus_76   (Western European hedgehog)   22 22
Procavia_capensis_76_1   (Cape rock hyrax)   24 24
Loxodonta_africana_76_3   (African savanna elephant)   41 41
Echinops_telfairi_76   (Small Madagascar hedgehog)   21 20
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   32 32
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   20 18
Macropus_eugenii_76_1.0   (Tammar wallaby)   23 22
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   39 39
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   31 31
Ornithorhynchus_anatinus_76_5   (Platypus)   30 30
Saccoglossus_kowalevskii_v3.0 71 71
Petromyzon_marinus_76_7.0   (Sea lamprey)   15 15
Meleagris_gallopavo_76_2   (Turkey)   41 41
Gallus_gallus_76_4   (Chicken)   28 28
Anas_platyrhynchos_76_1.0   (Mallard)   25 25
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   26 26
Ficedula_albicollis_76_1.0   (Collared flycatcher)   24 24
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   33 33
Anolis_carolinensis_76_2.0   (Green anole)   32 32
Xenopus_laevis_   (African clawed frog)   48 48
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   44 44
Latimeria_chalumnae_76_1   (Coelacanth)   34 34
Lepisosteus_oculatus_76   (Spotted gar)   34 34
Gadus_morhua_76_1   (Atlantic cod)   42 42
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   59 59
Takifugu_rubripes_76_4   (Torafugu)   126 126
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   48 48
Oryzias_latipes_76_1   (Japanese medaka)   38 38
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   38 38
Poecilia_formosa_76   (Amazon molly)   41 41
Oreochromis_niloticus_76_1.0   (Nile tilapia)   58 58
Astyanax_mexicanus_76   (Mexican tetra)   37 37
Danio_rerio_76_9   (Zebrafish)   69 69
Oikopleura_dioica 16 16
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   21 21
Ciona_intestinalis_76   (Vase tunicate)   16 16
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   17 16
Adineta_vaga 44 44
Octopus_bimaculoides_280 25 25
Crassostrea_gigas_22   (Pacific oyster)   12 12
Lottia_gigantea_   (Owl limpet)   13 13
Helobdella_robusta_ 26 26
Capitella_sp._I_ 18 18
Danaus_plexippus_OGS1.0   (Monarch butterfly)   12 12
Heliconius_melpomene_   (Postman butterfly)   11 11
Bombyx_mori_   (Domestic silkworm)   12 12
Nasonia_vitripennis_   (Jewel wasp)   16 16
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   27 27
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   15 15
Linepithema_humile_v1.1   (Argentine ant)   15 15
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   12 12
Solenopsis_invicta_v.2.2.3   (Red fire ant)   10 10
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   14 14
Atta_cephalotes_v1.1 12 12
Camponotus_floridanus_v3.3   (Florida carpenter ant)   14 14
Lucilia_cuprina   (Australian sheep blowfly)   15 15
Drosophila_grimshawi_1.3 15 15
Drosophila_willistoni_1.3 14 14
Drosophila_pseudoobscura_2.13 14 14
Drosophila_persimilis_1.3 14 14
Drosophila_suzukii 12 12
Drosophila_yakuba_1.3 14 14
Drosophila_simulans_1.3 12 12
Drosophila_sechellia_1.3 13 13
Drosophila_melanogaster_76_5   (Fruit fly)   42 42
Drosophila_erecta_1.3 14 14
Drosophila_ananassae_1.3 14 14
Drosophila_virilis_1.2 13 13
Drosophila_mojavensis_1.3 14 14
Megaselia_scalaris_22 10 10
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   16 16
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   18 18
Anopheles_darlingi_22   (American malaria mosquito)   12 12
Anopheles_gambiae_49_3j   (African malaria mosquito)   19 19
Tribolium_castaneum_3.0   (Red flour beetle)   15 15
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   14 14
Acyrthosiphon_pisum_   (Pea aphid)   16 16
Rhodnius_prolixus_22 16 16
Daphnia_pulex_   (Common water flea)   12 12
Strigamia_maritima_22 15 15
Sarcoptes_scabiei 10 10
Tetranychus_urticae_   (Two-spotted spider mite)   12 12
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   12 12
Pristionchus_pacificus_ 14 14
Meloidogyne_incognita_   (Southern root-knot nematode)   19 19
Meloidogyne_hapla_ 9 9
Onchocerca_volvulus_22 11 10
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   14 14
Caenorhabditis_japonica_ 11 11
Caenorhabditis_brenneri_ 18 18
Caenorhabditis_remanei_ 15 15
Caenorhabditis_elegans_76_235   (Roundworm)   30 30
Caenorhabditis_briggsae_2 12 12
Trichinella_spiralis_22 10 10
Hymenolepis_microstoma_ 14 14
Echinococcus_multilocularis_ 15 15
Echinococcus_granulosus_ 15 15
Taenia_solium_   (Pork tapeworm)   14 14
Schistosoma_mansoni_ 15 15
Mnemiopsis_leidyi   (Sea walnut)   12 12
Thelohanellus_kitauei 8 8
Acropora_digitifera_v1.0 6 6
Nematostella_vectensis_1.0   (Starlet sea anemone)   14 14
Hydra_vulgaris 14 14
Amphimedon_queenslandica 16 16
Trichoplax_adhaerens_ 13 13
Proterospongia_sp._ATCC_50818_ 14 14
Monosiga_brevicollis_ 13 12
Sphaeroforma_arctica_JP610_ 12 12
Capsaspora_owczarzaki_ATCC_30864_ 14 14
Conidiobolus_coronatus_NRRL28638_v1.0 10 10
Mortierella_verticillata_NRRL_6337_ 16 16
Phycomyces_blakesleeanus_ 19 19
Rhizopus_oryzae_RA_99-880_ 16 16
Mucor_circinelloides_ 18 18
Rhizomucor_miehei_CAU432_ 17 17
Malassezia_globosa_CBS_7966_ 16 16
Sporisorium_reilianum_22 11 11
Ustilago_maydis_ 11 11
Mixia_osmundae_IAM_14324_v1.0 12 12
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 12 12
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 10 10
Melampsora_laricis-populina_ 11 11
Rhodotorula_graminis_WP1_v1.0 11 11
Sporobolomyces_roseus_IAM_13481_ 8 8
Microbotryum_violaceum_22 12 12
Wallemia_sebi_v1.0 9 9
Sphaerobolus_stellatus_v1.0 11 11
Piloderma_croceum_F_1598_v1.0 12 12
Serpula_lacrymans_var._lacrymans_S7.9_ 9 9
Coniophora_puteana 13 13
Hydnomerulius_pinastri_v2.0 13 13
Paxillus_rubicundulus_Ve08.2h10_v1.0 11 11
Pisolithus_microcarpus_441_v1.0 12 12
Pisolithus_tinctorius_Marx_270_v1.0 12 12
Scleroderma_citrinum_Foug_A_v1.0 11 11
Coprinopsis_cinerea_okayama7_130_v3 13 13
Pleurotus_ostreatus_   (Oyster mushroom)   11 11
Amanita_thiersii_Skay4041_v1.0 12 12
Amanita_muscaria_Koide_v1.0   (Fly agaric)   13 13
Galerina_marginata_v1.0 11 11
Hebeloma_cylindrosporum_h7_v2.0 12 12
Laccaria_bicolor_S238N-H82_ 12 12
Agaricus_bisporus_var._bisporus_ 10 10
Schizophyllum_commune_ 11 11
Stereum_hirsutum_FP-91666_SS1__v1.0 13 13
Heterobasidion_annosum_ 11 11
Gloeophyllum_trabeumv1.0 11 11
Punctularia_strigosozonata_v1.0 11 11
Sebacina_vermifera_MAFF_305830_v1.0 14 14
Fomitiporia_mediterranea_v1.0 10 10
Tulasnella_calospora_AL13/4D_v1.0 16 16
Postia_placenta_ 16 16
Wolfiporia_cocos_MD-104_SS10__v1.0 11 11
Fomitopsis_pinicolav1.0 12 12
Fomitopsis_pinicola_FP-58527_SS1_v3.0 12 12
Phanerochaete_chrysosporium_RP-78_2.1 12 11
Dichomitus_squalens 12 12
Trametes_versicolor_v1.0 13 13
Tremella_mesenterica_   (Witches' butter)   11 11
Daldinia_eschscholzii_EC12_v1.0 12 12
Apiospora_montagnei_NRRL_25634_v1.0 12 12
Magnaporthe_poae_ATCC_64411_22 8 8
Magnaporthe_grisea_70-15_ 12 12
Podospora_anserina_ 11 11
Sporotrichum_thermophile_ATCC_42464_ 12 12
Thielavia_terrestris_NRRL_8126_ 12 12
Chaetomium_globosum_CBS_148.51_ 12 12
Neurospora_tetrasperma_ 12 12
Neurospora_discreta_FGSC_8579_ 12 12
Neurospora_crassa_OR74A_ 13 13
Cryphonectria_parasitica_   (Chestnut blight fungus)   12 12
Verticillium_albo-atrum_VaMs.102_ 10 10
Verticillium_dahliae_VdLs.17_ 12 12
Acremonium_alcalophilumv_1.0 12 12
Glomerella_graminicola_22 12 12
Fusarium_graminearum_ 12 12
Nectria_haematococca_mpVI_ 12 12
Fusarium_oxysporum_f._sp._lycopersici_4286_ 12 12
Fusarium_verticillioides_7600_ 12 12
Trichoderma_asperellum_CBS_433.97_v1.0 12 12
Trichoderma_atroviride_ 12 12
Trichoderma_citrinoviride_v1.0 12 12
Trichoderma_reesei_1.2 12 12
Trichoderma_virens_Gv29-8_ 12 12
Trichoderma_longibrachiatum_ATCC_18648_v1.0 12 12
Trichoderma_harzianum_CBS_226.95_v1.0 12 12
Amorphotheca_resinae_v1.0   (Creosote fungus)   12 12
Botrytis_cinerea_B05.10_ 11 11
Sclerotinia_sclerotiorum_ 11 11
Blumeria_graminis_22 12 12
Didymella_exigua_CBS_183.55_v1.0 12 12
Leptosphaeria_maculans_22 12 12
Setosphaeria_turcica_v1.0 12 12
Cochliobolus_miyabeanus_ATCC_44560_v1.0 12 12
Cochliobolus_victoriae_FI3_v1.0 12 12
Cochliobolus_carbonum_26-R-13_v1.0 12 12
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   11 11
Alternaria_brassicicola_ 11 11
Cochliobolus_lunatus_m118_v2.0 12 12
Pyrenophora_teres_f._teres_22 12 12
Pyrenophora_tritici-repentis_ 12 12
Stagonospora_nodorum_ 12 12
Mycosphaerella_graminicola_IPO323_ 11 11
Zasmidium_cellare_ATCC_36951_v1.0 12 12
Dothistroma_septosporum 12 12
Septoria_musiva_v1.0 12 12
Mycosphaerella_fijiensis_CIRAD86_ 11 11
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 12 12
Paracoccidioides_brasiliensis_Pb18_ 11 11
Coccidioides_posadasii_RMSCC_3488_ 12 12
Coccidioides_immitis_RS_ 12 12
Ajellomyces_dermatitidis_SLH14081_ 12 12
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 9 9
Microsporum_canis_CBS_113480_ 12 12
Trichophyton_equinum_CBS_127.97_ 10 10
Trichophyton_verrucosum_HKI_0517_ 9 9
Arthroderma_benhamiae_CBS_112371_ 8 8
Trichophyton_tonsurans_CBS_112818_ 11 11
Trichophyton_rubrum_CBS_118892_ 12 12
Uncinocarpus_reesii_1704_ 10 10
Aspergillus_zonatus_v1.0 12 12
Penicillium_chrysogenum_Wisconsin_54-1255_ 10 10
Penicillium_chrysogenum_v1.0 12 12
Aspergillus_acidus_v1.0 12 12
Aspergillus_fumigatus_Af293 11 11
Aspergillus_brasiliensis_v1.0 12 12
Aspergillus_nidulans_FGSC_A4_ 12 12
Aspergillus_sydowii_v1.0 12 12
Aspergillus_versicolor_v1.0 12 12
Aspergillus_glaucus 12 12
Aspergillus_carbonarius_ITEM_5010_ 12 12
Neosartorya_fischeri_NRRL_181_ 12 12
Aspergillus_terreus_NIH2624_ 11 11
Aspergillus_tubingensis_v1.0 12 12
Aspergillus_wentii_v1.0 12 12
Aspergillus_oryzae_RIB40_ 10 10
Aspergillus_niger_22 11 11
Aspergillus_niger_ATCC_1015_ 5 5
Aspergillus_flavus_NRRL3357_ 11 11
Aspergillus_clavatus_NRRL_1_ 12 12
Penicillium_marneffei_ATCC_18224_ 12 12
Tuber_melanosporum_Mel28_22 12 12
Tuber_melanosporum_Vittad_   (Perigord truffle)   12 12
Hansenula_polymorpha_v2.0 12 11
Dekkera_bruxellensis_CBS_2499_v2.0 14 13
Pichia_membranifaciensv1.0 11 11
Candida_tanzawaensis_NRRL_Y-17324__v1.0 13 13
Candida_dubliniensis_CD36_ 13 13
Candida_tropicalis_MYA-3404_ 14 14
Candida_parapsilosis_ 12 12
Candida_albicans_SC5314 15 15
Lodderomyces_elongisporus_NRRL_YB-4239_ 12 12
Babjeviella_inositovora_NRRL_Y-12698_v1.0 12 12
Pichia_stipitis_CBS_6054_ 13 13
Candida_guilliermondii_ATCC_6260_ 13 13
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 13 13
Debaromyces_hansenii 12 12
Wickerhamomyces_anomalus 13 13
Pichia_pastoris_GS115_ 14 13
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 9 9
Yarrowia_lipolytica_CLIB122 11 11
Candida_lusitaniae_ATCC_42720_ 12 12
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 13 13
Vanderwaltozyma_polyspora_DSM_70294_ 12 12
Candida_glabrata_CBS138 14 14
Kluyveromyces_thermotolerans_CBS_6340 13 13
Lachancea_kluyveri_ 13 13
Kluyveromyces_waltii 12 12
Ashbya_gossypii_ATCC_10895_ 12 12
Zygosaccharomyces_rouxii_ 13 13
Saccharomyces_mikatae_MIT 15 15
Saccharomyces_paradoxus_MIT 16 16
Saccharomyces_cerevisiae_76   (Baker's yeast)   16 16
Saccharomyces_bayanus_MIT 15 15
Kluyveromyces_lactis 13 13
Schizosaccharomyces_cryophilus_OY26_22 12 12
Schizosaccharomyces_octosporus_yFS286_ 12 12
Schizosaccharomyces_japonicus_yFS275_ 12 12
Schizosaccharomyces_pombe   (Fission yeast)   12 12
Catenaria_anguillulae_PL171_v1.0 11 11
Allomyces_macrogynus_ATCC_38327_ 19 19
Spizellomyces_punctatus_DAOM_BR117_ 13 13
Dictyostelium_discoideum 11 11
Dictyostelium_purpureum_ 10 10
Entamoeba_dispar_1.2 21 21
Entamoeba_invadens_1.2 28 28
Entamoeba_histolytica_1 23 23
Selaginella_moellendorffii_ 32 32
Pinus_taeda   (Loblolly pine)   29 29
Picea_abies   (Norway spruce)   18 18
Eucalyptus_grandis_v201   (Rose gum)   57 57
Theobroma_cacao_B97-61/B2_v1   (Cacao)   32 32
Gossypium_raimondii_v221 162 162
Citrus_clementina_v165 41 41
Citrus_sinensis_v154   (Sweet orange)   72 72
Thellungiella_halophila_v173 46 46
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   67 66
Capsella_rubella_v183 47 46
Arabidopsis_lyrata_   (Lyrate rockcress)   44 44
Arabidopsis_thaliana_10   (Thale cress)   53 53
Carica_papaya_   (Papaya)   27 27
Medicago_truncatula_   (Barrel medic)   55 55
Phaseolus_vulgaris_v186   (French bean)   50 50
Glycine_max_v109   (Soybean)   91 91
Cucumis_sativus_v122   (Cucumber)   47 47
Fragaria_vesca_   (Wild strawberry)   30 30
Malus_domestica_v196   (Apple)   67 66
Prunus_persica_v139   (Peach)   33 33
Linum_usitatissimum_v200   (Flax)   75 75
Manihot_esculenta_v147   (Cassava)   55 55
Populus_trichocarpa_v156   (Black cottonwood)   56 56
Vitis_vinifera_   (Wine grape)   30 30
Mimulus_guttatus_v140   (Spotted monkey flower)   42 42
Solanum_lycopersicum_v.2.3   (Tomato)   38 38
Solanum_tuberosum_   (Potato)   35 35
Actinidia_chinensis_Hongyang_ 49 49
Aquilegia_coerulea_v195 60 60
Triticum_urartu_22 27 27
Triticum_aestivum_22   (Bread wheat)   88 88
Aegilops_tauschii_22 32 32
Brachypodium_distachyon_   (Stiff brome)   36 36
Oryza_barthii_22   (African wild rice)   45 45
Oryza_meridionalis_22 50 50
Oryza_glumaepatula_22 50 50
Oryza_glaberrima   (African rice)   36 36
Oryza_punctata_22 48 48
Oryza_nivara_22 53 53
Oryza_brachyantha_22   (Malo sina)   30 30
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   53 53
Oryza_sativa_v193   (Rice)   53 53
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   56 52
Panicum_virgatum_v202   (Switchgrass)   70 70
Setaria_italica_v164   (Foxtail millet)   38 38
Zea_mays_subsp._mays_   (Maize)   76 76
Zea_mays_v181   (Maize)   89 86
Sorghum_bicolor_   (Sorghum)   39 37
Musa_balbisiana   (Balbis banana)   59 58
Musa_acuminata_22   (Wild Malaysian banana)   65 62
Amborella_trichopoda_22 27 27
Physcomitrella_patens 28 28
Coccomyxa_subellipsoidea_sp._C-169_v2 7 7
Asterochloris_sp._Cgr/DA1pho_v1.0 4 4
Chlorella_variabilis_sp._NC64A_ 6 6
Chlorella_vulgaris_ 7 7
Volvox_carteri_f._nagariensis_ 5 5
Volvox_carteri_v199 6 6
Chlamydomonas_reinhardtii_4.0 8 8
Ostreococcus_sp._RCC809_ 5 5
Ostreococcus_lucimarinus_CCE9901_ 6 6
Ostreococcus_tauri_ 5 5
Bathycoccus_prasinos_ 6 6
Micromonas_sp._RCC299_ 6 6
Micromonas_pusilla_CCMP1545_v3.0 8 8
Cyanidioschyzon_merolae_strain_10D_22 5 5
Cyanidioschyzon_merolae 5 5
Porphyridium_purpureum_02_2012 7 7
Thecamonas_trahens_ATCC_50062_ 8 8
Bigelowiella_natans_CCMP2755_22 12 12
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 7 7
Leishmania_mexicana_2.4 6 6
Leishmania_major_strain_Friedlin_ 6 6
Leishmania_infantum_JPCM5_2.4 6 6
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 6 6
Trypanosoma_vivax_ 6 6
Trypanosoma_cruzi_strain_CL_Brener 4 4
Trypanosoma_congolense_2.4 7 7
Trypanosoma_brucei_gambiense_v4.1 5 5
Trypanosoma_brucei_TREU927_v4.1 5 5
Ectocarpus_siliculosus 13 13
Aureococcus_anophagefferens_ 4 4
Albugo_laibachii_22 10 10
Pythium_iwayamai_DAOM_BR242034_22 9 9
Pythium_arrhenomanes_ATCC_12531_22 9 9
Pythium_ultimum_v1.7-2 8 8
Pythium_aphanidermatum_DAOM_BR444_22 8 8
Pythium_irregulare_DAOM_BR486_22 10 10
Pythium_vexans_DAOM_BR484_22 9 9
Phytophthora_ramorum_1.1   (Sudden oak death agent)   9 9
Phytophthora_sojae_1.1 10 10
Phytophthora_infestans_T30-4_ 10 10
Phytophthora_capsici_ 8 8
Hyaloperonospora_arabidopsidis_22 8 8
Phaeodactylum_tricornutumCCAP_1055/1 6 6
Fragilariopsis_cylindrus 9 9
Thalassiosira_pseudonana_CCMP1335 4 4
Perkinsus_marinus_ATCC_50983_ 9 9
Paramecium_tetraurelia_ 13 13
Tetrahymena_thermophila_SB210_1_ 8 8
Ichthyophthirius_multifiliis_strain_G5_ 2 2
Cryptosporidium_hominis 3 3
Cryptosporidium_muris 4 4
Cryptosporidium_parvum_Iowa_II 4 4
Neospora_caninum 3 3
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 2 2
Toxoplasma_gondii_GT1 2 2
Babesia_bovis_T2Bo_ 6 6
Theileria_parva__ 3 3
Theileria_annulata 3 3
Plasmodium_falciparum_3D7_ 3 3
Plasmodium_vivax_SaI-1_7.0 3 3
Plasmodium_knowlesi_strain_H_ 3 3
Plasmodium_yoelii_ssp._yoelii_1_ 3 3
Plasmodium_chabaudi_ 3 3
Plasmodium_berghei_ANKA_ 3 3
Symbiodinium_minutum_clade_B1_v1.2 9 9
Naegleria_gruberi_ 7 7
Trichomonas_vaginalis_ 9 9
Guillardia_theta_CCMP2712_v1.0_ 12 12
Emiliania_huxleyi_CCMP1516_ 11 9

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   51 51
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   30 30
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   21 21
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   12 12
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   25 25
Cryptococcus_neoformans_var._grubii_H99_ 11 11
Cryptococcus_neoformans_B-3501A_ 11 11
Cryptococcus_neoformans_JEC21_ 10 10
Paracoccidioides_brasiliensis_Pb01_ 12 12
Paracoccidioides_brasiliensis_Pb03_ 9 9
Coccidioides_posadasii_str._Silveira_ 12 12
Coccidioides_immitis_RMSCC_3703_ 11 11
Coccidioides_immitis_RMSCC_2394_ 12 12
Coccidioides_immitis_H538.4_ 10 10
Ajellomyces_dermatitidis_ER-3_ 11 11
Histoplasma_capsulatum_H143 10 10
Histoplasma_capsulatum_H88 12 12
Histoplasma_capsulatum_G186AR 10 10
Aspergillus_fumigatus_A1163_ 11 11
Candida_albicans_WO-1_ 12 12
Saccharomyces_cerevisiae_UC5 16 16
Saccharomyces_cerevisiae_PW5 14 14
Saccharomyces_cerevisiae_FL100 8 8
Saccharomyces_cerevisiae_CLIB324 9 9
Saccharomyces_cerevisiae_CBS7960 13 13
Saccharomyces_cerevisiae_YJM269 10 10
Saccharomyces_cerevisiae_T7 16 16
Saccharomyces_cerevisiae_FostersB 12 12
Saccharomyces_cerevisiae_FostersO 13 13
Saccharomyces_cerevisiae_VL3 12 12
Saccharomyces_cerevisiae_Vin13 11 11
Saccharomyces_cerevisiae_LalvinQA23 13 13
Saccharomyces_cerevisiae_AWRI796 14 14
Saccharomyces_cerevisiae_Sigma1278b 16 16
Saccharomyces_cerevisiae_W303 16 16
Saccharomyces_cerevisiae_JAY291 15 15
Saccharomyces_cerevisiae_AWRI1631 9 9
Saccharomyces_cerevisiae_YPS163 10 10
Saccharomyces_cerevisiae_M22 3 3
Saccharomyces_cerevisiae_T73 11 11
Saccharomyces_cerevisiae_CLIB215 13 13
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 16 16
Saccharomyces_cerevisiae_YJM789 16 16
Saccharomyces_cerevisiae_RM11-1a 16 16
Saccharomyces_cerevisiae_RM11-1a_ 16 16
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   16 16
Schizosaccharomyces_pombe_972h-_ 12 12
Batrachochytrium_dendrobatidis_JEL423_ 12 12
Batrachochytrium_dendrobatidis_JAM81_ 13 13
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   32 32
Hordeum_vulgare_22   (Domesticated barley)   59 59
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   41 41
Trypanosoma_brucei_Lister_427_v4.1 5 5
Neospora_caninum_Nc-Liverpool_6.2 3 3
Plasmodium_falciparum_HB3_ 3 3
Plasmodium_falciparum_Dd2_ 2 2

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   31 31
Pan_troglodytes_69_2.1.4   (Chimpanzee)   22 22
Gorilla_gorilla_69_3.1   (Western gorilla)   25 25
Pongo_abelii_69_2   (Sumatran orangutan)   25 25
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   28 28
Macaca_mulatta_69_1   (Rhesus monkey)   27 27
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   26 26
Otolemur_garnettii_69_3   (Small-eared galago)   28 28
Microcebus_murinus_69_1   (Gray mouse lemur)   22 22
Rattus_norvegicus_69_3.4   (Norway rat)   28 28
Mus_musculus_69_38   (House mouse)   29 29
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   22 22
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   22 22
Cavia_porcellus_69_3   (Domestic guinea pig)   27 27
Oryctolagus_cuniculus_69_2   (Rabbit)   23 23
Ochotona_princeps_69   (American pika)   25 24
Tupaia_belangeri_69   (Northern tree shrew)   24 22
Sus_scrofa_69_10.2   (Pig)   25 25
Bos_taurus_69_3.1   (Cattle)   28 28
Vicugna_pacos_69_1   (Alpaca)   15 15
Tursiops_truncatus_69_1   (Bottlenose dolphin)   26 26
Mustela_putorius_furo_69_1.0   (Domestic ferret)   25 25
Ailuropoda_melanoleuca_69_1   (Giant panda)   26 26
Canis_familiaris_69_3.1   (Dog)   29 29
Felis_catus_69   (Domestic cat)   18 18
Equus_caballus_69_2   (Horse)   26 26
Myotis_lucifugus_69_2.0   (Little brown bat)   28 28
Pteropus_vampyrus_69_1   (Large flying fox)   25 25
Sorex_araneus_69_1   (European shrew)   18 17
Erinaceus_europaeus_69   (Western European hedgehog)   22 22
Procavia_capensis_69_1   (Cape rock hyrax)   24 24
Loxodonta_africana_69_3   (African savanna elephant)   29 29
Echinops_telfairi_69   (Small Madagascar hedgehog)   21 20
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   19 19
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   20 18
Macropus_eugenii_69_1.0   (Tammar wallaby)   23 22
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   28 28
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   29 29
Ornithorhynchus_anatinus_69_5   (Platypus)   28 28
Petromyzon_marinus_69_7.0   (Sea lamprey)   14 14
Meleagris_gallopavo_69_2   (Turkey)   25 25
Gallus_gallus_69_2   (Chicken)   26 26
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   26 26
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   25 25
Anolis_carolinensis_69_2.0   (Green anole)   27 27
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   28 28
Latimeria_chalumnae_69_1   (Coelacanth)   28 28
Gadus_morhua_69_1   (Atlantic cod)   40 40
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   42 42
Takifugu_rubripes_69_4   (Torafugu)   39 39
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   37 37
Oryzias_latipes_69_1   (Japanese medaka)   33 33
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   38 38
Oreochromis_niloticus_69_1.0   (Nile tilapia)   40 40
Danio_rerio_69_9   (Zebrafish)   37 37
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   11 11
Ciona_intestinalis_69   (Vase tunicate)   14 14
Drosophila_melanogaster_69_5   (Fruit fly)   14 14
Caenorhabditis_elegans_69_215   (Roundworm)   15 15
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   16 16
Arabidopsis_thaliana_10   (Thale cress)   43 43

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   187 187
Homo_sapiens__(NCBI_version)   (Human)   50 50
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   29 29
Heliconius_numata__(Incomplete) 3 3
Loa_loa_v3.3_(Request)   (Eye worm)   13 13
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   11 11
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   10 10
Moniliophthora_perniciosa_FA553__(Genome_survey) 5 5
Encephalitozoon_cuniculi_(endoparasite) 1 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   3 3
Lotus_japonicus__(Early_assembly) 43 43
Malus_x_domestica_(Duplicate)   (Apple)   67 66
Ricinus_communis__(Early_assembly)   (Castor bean)   30 30
Nicotiana_benthamiana_0.4.4_(Early_draft) 72 68
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   38 38
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   38 38
Phoenix_dactylifera__(Early_draft)   (Date palm)   28 28
Protozoadb_2010_08_(Protozoadb) 208 208
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 353 353
STRING_v9.0.5_(STRING) 1998 1996
Uniprot_2018_03_genome 27612 27532
NCBI_2017_08_genome 31417 31393
TargetDB__(Targets) 65 64
Protein_Data_Bank_(all_PDB_sequenc) 151 151
PDB_chains_(SCOP_1.75)_(PDB) 14 14

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]