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Domain combinations for Fibronectin type III superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Fibronectin type III domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   2572 773
Pan_troglodytes_76_2.1.4   (Chimpanzee)   527 197
Gorilla_gorilla_76_3.1   (Western gorilla)   743 259
Pongo_abelii_76_2   (Sumatran orangutan)   584 210
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   590 211
Papio_anubis_76   (Olive baboon)   623 220
Macaca_mulatta_76_1   (Rhesus monkey)   901 352
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   1219 460
Otolemur_garnettii_76_3   (Small-eared galago)   486 199
Microcebus_murinus_76_1   (Gray mouse lemur)   476 174
Rattus_norvegicus_76_5.0   (Norway rat)   574 257
Mus_musculus_76_38   (House mouse)   1127 450
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   470 170
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   565 212
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   523 201
Cavia_porcellus_76_3   (Domestic guinea pig)   676 211
Oryctolagus_cuniculus_76_2   (Rabbit)   549 197
Ochotona_princeps_76   (American pika)   481 168
Tupaia_belangeri_76   (Northern tree shrew)   422 156
Sus_scrofa_76_10.2   (Pig)   604 288
Bos_taurus_76_3.1   (Cattle)   551 221
Ovis_aries_76_3.1   (Sheep)   623 227
Vicugna_pacos_76_1   (Alpaca)   344 114
Tursiops_truncatus_76_1   (Bottlenose dolphin)   528 191
Mustela_putorius_furo_76_1.0   (Domestic ferret)   586 215
Ailuropoda_melanoleuca_76_1   (Giant panda)   728 230
Canis_familiaris_76_3.1   (Dog)   845 301
Felis_catus_76_6.2   (Domestic cat)   600 232
Equus_caballus_76_2   (Horse)   725 250
Myotis_lucifugus_76_2.0   (Little brown bat)   507 190
Pteropus_vampyrus_76_1   (Large flying fox)   517 189
Sorex_araneus_76_1   (European shrew)   307 123
Erinaceus_europaeus_76   (Western European hedgehog)   421 154
Procavia_capensis_76_1   (Cape rock hyrax)   479 174
Loxodonta_africana_76_3   (African savanna elephant)   772 289
Echinops_telfairi_76   (Small Madagascar hedgehog)   439 163
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   536 222
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   333 115
Macropus_eugenii_76_1.0   (Tammar wallaby)   461 167
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   586 231
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   605 207
Ornithorhynchus_anatinus_76_5   (Platypus)   521 223
Saccoglossus_kowalevskii_v3.0 2237 344
Petromyzon_marinus_76_7.0   (Sea lamprey)   310 92
Meleagris_gallopavo_76_2   (Turkey)   588 236
Gallus_gallus_76_4   (Chicken)   571 204
Anas_platyrhynchos_76_1.0   (Mallard)   544 186
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   429 186
Ficedula_albicollis_76_1.0   (Collared flycatcher)   556 205
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   634 235
Anolis_carolinensis_76_2.0   (Green anole)   469 198
Xenopus_laevis_   (African clawed frog)   404 203
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   510 195
Latimeria_chalumnae_76_1   (Coelacanth)   567 223
Lepisosteus_oculatus_76   (Spotted gar)   818 306
Gadus_morhua_76_1   (Atlantic cod)   668 273
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   938 361
Takifugu_rubripes_76_4   (Torafugu)   2432 954
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   787 318
Oryzias_latipes_76_1   (Japanese medaka)   655 268
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   764 277
Poecilia_formosa_76   (Amazon molly)   806 278
Oreochromis_niloticus_76_1.0   (Nile tilapia)   984 374
Astyanax_mexicanus_76   (Mexican tetra)   838 321
Danio_rerio_76_9   (Zebrafish)   1472 489
Oikopleura_dioica 156 56
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   771 174
Ciona_intestinalis_76   (Vase tunicate)   211 78
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   897 354
Adineta_vaga 170 81
Octopus_bimaculoides_280 298 143
Crassostrea_gigas_22   (Pacific oyster)   311 144
Lottia_gigantea_   (Owl limpet)   195 96
Helobdella_robusta_ 216 105
Capitella_sp._I_ 276 144
Danaus_plexippus_OGS1.0   (Monarch butterfly)   154 69
Heliconius_melpomene_   (Postman butterfly)   124 66
Bombyx_mori_   (Domestic silkworm)   127 76
Nasonia_vitripennis_   (Jewel wasp)   75 39
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   361 135
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   133 60
Linepithema_humile_v1.1   (Argentine ant)   137 67
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   128 67
Solenopsis_invicta_v.2.2.3   (Red fire ant)   110 55
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   133 57
Atta_cephalotes_v1.1 121 64
Camponotus_floridanus_v3.3   (Florida carpenter ant)   190 86
Lucilia_cuprina   (Australian sheep blowfly)   130 60
Drosophila_grimshawi_1.3 157 69
Drosophila_willistoni_1.3 149 68
Drosophila_pseudoobscura_2.13 153 65
Drosophila_persimilis_1.3 131 66
Drosophila_suzukii 145 60
Drosophila_yakuba_1.3 145 63
Drosophila_simulans_1.3 110 59
Drosophila_sechellia_1.3 135 68
Drosophila_melanogaster_76_5   (Fruit fly)   758 277
Drosophila_erecta_1.3 142 64
Drosophila_ananassae_1.3 151 67
Drosophila_virilis_1.2 147 68
Drosophila_mojavensis_1.3 129 68
Megaselia_scalaris_22 73 47
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   156 72
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   149 76
Anopheles_darlingi_22   (American malaria mosquito)   93 43
Anopheles_gambiae_49_3j   (African malaria mosquito)   148 68
Tribolium_castaneum_3.0   (Red flour beetle)   157 74
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   139 60
Acyrthosiphon_pisum_   (Pea aphid)   108 53
Rhodnius_prolixus_22 128 63
Daphnia_pulex_   (Common water flea)   134 75
Strigamia_maritima_22 340 140
Sarcoptes_scabiei 112 50
Tetranychus_urticae_   (Two-spotted spider mite)   163 83
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   188 101
Pristionchus_pacificus_ 112 47
Meloidogyne_incognita_   (Southern root-knot nematode)   153 50
Meloidogyne_hapla_ 57 28
Onchocerca_volvulus_22 114 44
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   139 66
Caenorhabditis_japonica_ 122 46
Caenorhabditis_brenneri_ 191 68
Caenorhabditis_remanei_ 139 50
Caenorhabditis_elegans_76_235   (Roundworm)   502 104
Caenorhabditis_briggsae_2 135 47
Trichinella_spiralis_22 123 50
Hymenolepis_microstoma_ 121 49
Echinococcus_multilocularis_ 135 57
Echinococcus_granulosus_ 126 49
Taenia_solium_   (Pork tapeworm)   173 104
Schistosoma_mansoni_ 105 49
Mnemiopsis_leidyi   (Sea walnut)   55 38
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 392 225
Nematostella_vectensis_1.0   (Starlet sea anemone)   199 107
Hydra_vulgaris 160 83
Amphimedon_queenslandica 1091 548
Trichoplax_adhaerens_ 107 64
Proterospongia_sp._ATCC_50818_ 131 49
Monosiga_brevicollis_ 30 23
Sphaeroforma_arctica_JP610_ 4 4
Capsaspora_owczarzaki_ATCC_30864_ 53 26
Conidiobolus_coronatus_NRRL28638_v1.0 1 1
Mortierella_verticillata_NRRL_6337_ 2 2
Phycomyces_blakesleeanus_ 1 1
Rhizopus_oryzae_RA_99-880_ 1 1
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 1 1
Sporobolomyces_roseus_IAM_13481_ 1 1
Microbotryum_violaceum_22 1 1
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 2 2
Piloderma_croceum_F_1598_v1.0 1 1
Serpula_lacrymans_var._lacrymans_S7.9_ 1 1
Coniophora_puteana 1 1
Hydnomerulius_pinastri_v2.0 1 1
Paxillus_rubicundulus_Ve08.2h10_v1.0 1 1
Pisolithus_microcarpus_441_v1.0 1 1
Pisolithus_tinctorius_Marx_270_v1.0 2 2
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 1 1
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 2 2
Amanita_muscaria_Koide_v1.0   (Fly agaric)   2 2
Galerina_marginata_v1.0 2 2
Hebeloma_cylindrosporum_h7_v2.0 1 1
Laccaria_bicolor_S238N-H82_ 1 1
Agaricus_bisporus_var._bisporus_ 1 1
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 1 1
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 1 1
Punctularia_strigosozonata_v1.0 2 2
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 1 1
Tulasnella_calospora_AL13/4D_v1.0 1 1
Postia_placenta_ 2 2
Wolfiporia_cocos_MD-104_SS10__v1.0 1 1
Fomitopsis_pinicolav1.0 1 1
Fomitopsis_pinicola_FP-58527_SS1_v3.0 1 1
Phanerochaete_chrysosporium_RP-78_2.1 2 2
Dichomitus_squalens 1 1
Trametes_versicolor_v1.0 1 1
Tremella_mesenterica_   (Witches' butter)   1 1
Daldinia_eschscholzii_EC12_v1.0 3 3
Apiospora_montagnei_NRRL_25634_v1.0 3 3
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 2 2
Sporotrichum_thermophile_ATCC_42464_ 2 2
Thielavia_terrestris_NRRL_8126_ 3 3
Chaetomium_globosum_CBS_148.51_ 3 3
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 3 3
Neurospora_crassa_OR74A_ 3 3
Cryphonectria_parasitica_   (Chestnut blight fungus)   2 2
Verticillium_albo-atrum_VaMs.102_ 4 3
Verticillium_dahliae_VdLs.17_ 3 3
Acremonium_alcalophilumv_1.0 2 2
Glomerella_graminicola_22 3 3
Fusarium_graminearum_ 2 2
Nectria_haematococca_mpVI_ 3 3
Fusarium_oxysporum_f._sp._lycopersici_4286_ 2 2
Fusarium_verticillioides_7600_ 2 2
Trichoderma_asperellum_CBS_433.97_v1.0 4 4
Trichoderma_atroviride_ 2 2
Trichoderma_citrinoviride_v1.0 2 2
Trichoderma_reesei_1.2 2 2
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 2 2
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   4 3
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 2 2
Didymella_exigua_CBS_183.55_v1.0 4 4
Leptosphaeria_maculans_22 2 2
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 4
Alternaria_brassicicola_ 2 2
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 4 4
Mycosphaerella_graminicola_IPO323_ 4 4
Zasmidium_cellare_ATCC_36951_v1.0 5 4
Dothistroma_septosporum 3 3
Septoria_musiva_v1.0 6 5
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 2 2
Paracoccidioides_brasiliensis_Pb18_ 2 2
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 2 2
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 2 2
Microsporum_canis_CBS_113480_ 6 5
Trichophyton_equinum_CBS_127.97_ 5 5
Trichophyton_verrucosum_HKI_0517_ 5 4
Arthroderma_benhamiae_CBS_112371_ 4 4
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 2 2
Penicillium_chrysogenum_v1.0 2 2
Aspergillus_acidus_v1.0 3 3
Aspergillus_fumigatus_Af293 2 2
Aspergillus_brasiliensis_v1.0 2 2
Aspergillus_nidulans_FGSC_A4_ 5 4
Aspergillus_sydowii_v1.0 2 2
Aspergillus_versicolor_v1.0 2 2
Aspergillus_glaucus 2 2
Aspergillus_carbonarius_ITEM_5010_ 2 2
Neosartorya_fischeri_NRRL_181_ 6 5
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 3 3
Aspergillus_wentii_v1.0 2 2
Aspergillus_oryzae_RIB40_ 2 2
Aspergillus_niger_22 3 3
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 4 3
Aspergillus_clavatus_NRRL_1_ 2 2
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Mel28_22 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   2 2
Hansenula_polymorpha_v2.0 2 2
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 2 2
Candida_tanzawaensis_NRRL_Y-17324__v1.0 1 1
Candida_dubliniensis_CD36_ 1 1
Candida_tropicalis_MYA-3404_ 1 1
Candida_parapsilosis_ 1 1
Candida_albicans_SC5314 1 1
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 2 2
Pichia_stipitis_CBS_6054_ 1 1
Candida_guilliermondii_ATCC_6260_ 1 1
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 1 1
Debaromyces_hansenii 1 1
Wickerhamomyces_anomalus 2 2
Pichia_pastoris_GS115_ 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 1 1
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 3 3
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 1 1
Vanderwaltozyma_polyspora_DSM_70294_ 1 1
Candida_glabrata_CBS138 2 2
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 2 2
Ashbya_gossypii_ATCC_10895_ 1 1
Zygosaccharomyces_rouxii_ 2 2
Saccharomyces_mikatae_MIT 1 1
Saccharomyces_paradoxus_MIT 1 1
Saccharomyces_cerevisiae_76   (Baker's yeast)   2 2
Saccharomyces_bayanus_MIT 1 1
Kluyveromyces_lactis 1 1
Schizosaccharomyces_cryophilus_OY26_22 1 1
Schizosaccharomyces_octosporus_yFS286_ 1 1
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   1 1
Catenaria_anguillulae_PL171_v1.0 7 6
Allomyces_macrogynus_ATCC_38327_ 3 2
Spizellomyces_punctatus_DAOM_BR117_ 14 11
Dictyostelium_discoideum 1 1
Dictyostelium_purpureum_ 1 1
Selaginella_moellendorffii_ 15 6
Pinus_taeda   (Loblolly pine)   1 1
Picea_abies   (Norway spruce)   2 2
Eucalyptus_grandis_v201   (Rose gum)   3 3
Theobroma_cacao_B97-61/B2_v1   (Cacao)   3 3
Gossypium_raimondii_v221 12 12
Citrus_clementina_v165 5 5
Citrus_sinensis_v154   (Sweet orange)   6 6
Thellungiella_halophila_v173 5 5
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   4 4
Capsella_rubella_v183 5 5
Arabidopsis_lyrata_   (Lyrate rockcress)   3 3
Arabidopsis_thaliana_10   (Thale cress)   7 7
Carica_papaya_   (Papaya)   1 1
Medicago_truncatula_   (Barrel medic)   1 1
Phaseolus_vulgaris_v186   (French bean)   5 5
Glycine_max_v109   (Soybean)   9 9
Cucumis_sativus_v122   (Cucumber)   6 6
Fragaria_vesca_   (Wild strawberry)   2 2
Malus_domestica_v196   (Apple)   7 7
Prunus_persica_v139   (Peach)   2 2
Linum_usitatissimum_v200   (Flax)   5 5
Manihot_esculenta_v147   (Cassava)   4 4
Populus_trichocarpa_v156   (Black cottonwood)   5 5
Vitis_vinifera_   (Wine grape)   3 3
Mimulus_guttatus_v140   (Spotted monkey flower)   2 2
Solanum_lycopersicum_v.2.3   (Tomato)   2 2
Solanum_tuberosum_   (Potato)   1 1
Actinidia_chinensis_Hongyang_ 7 7
Aquilegia_coerulea_v195 5 5
Triticum_urartu_22 4 4
Triticum_aestivum_22   (Bread wheat)   11 11
Aegilops_tauschii_22 3 3
Brachypodium_distachyon_   (Stiff brome)   4 4
Oryza_barthii_22   (African wild rice)   3 3
Oryza_meridionalis_22 4 4
Oryza_glumaepatula_22 7 7
Oryza_glaberrima   (African rice)   4 4
Oryza_punctata_22 4 4
Oryza_nivara_22 6 6
Oryza_brachyantha_22   (Malo sina)   3 3
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   5 5
Oryza_sativa_v193   (Rice)   5 5
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   8 8
Panicum_virgatum_v202   (Switchgrass)   4 4
Setaria_italica_v164   (Foxtail millet)   2 2
Zea_mays_subsp._mays_   (Maize)   6 6
Zea_mays_v181   (Maize)   6 6
Sorghum_bicolor_   (Sorghum)   3 3
Musa_balbisiana   (Balbis banana)   4 4
Musa_acuminata_22   (Wild Malaysian banana)   5 5
Amborella_trichopoda_22 2 2
Physcomitrella_patens 11 6
Coccomyxa_subellipsoidea_sp._C-169_v2 8 4
Asterochloris_sp._Cgr/DA1pho_v1.0 1 1
Chlorella_variabilis_sp._NC64A_ 29 14
Chlorella_vulgaris_ 8 4
Volvox_carteri_f._nagariensis_ 9 5
Volvox_carteri_v199 10 6
Chlamydomonas_reinhardtii_4.0 8 4
Ostreococcus_sp._RCC809_ 3 3
Ostreococcus_lucimarinus_CCE9901_ 2 2
Ostreococcus_tauri_ 5 5
Bathycoccus_prasinos_ 1 1
Micromonas_sp._RCC299_ 8 5
Micromonas_pusilla_CCMP1545_v3.0 3 3
Porphyridium_purpureum_02_2012 1 1
Thecamonas_trahens_ATCC_50062_ 44 21
Bigelowiella_natans_CCMP2755_22 16 14
Giardia_lamblia_2.3 1 1
Cyanophora_paradoxa_ 202 132
Leishmania_mexicana_2.4 21 2
Leishmania_major_strain_Friedlin_ 21 2
Leishmania_infantum_JPCM5_2.4 21 1
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 22 2
Trypanosoma_vivax_ 18 2
Trypanosoma_cruzi_strain_CL_Brener 19 2
Trypanosoma_congolense_2.4 14 2
Trypanosoma_brucei_gambiense_v4.1 21 2
Trypanosoma_brucei_TREU927_v4.1 21 2
Ectocarpus_siliculosus 52 25
Aureococcus_anophagefferens_ 37 13
Albugo_laibachii_22 39 16
Pythium_iwayamai_DAOM_BR242034_22 61 30
Pythium_arrhenomanes_ATCC_12531_22 68 27
Pythium_ultimum_v1.7-2 62 33
Pythium_aphanidermatum_DAOM_BR444_22 61 26
Pythium_irregulare_DAOM_BR486_22 71 27
Pythium_vexans_DAOM_BR484_22 58 28
Phytophthora_ramorum_1.1   (Sudden oak death agent)   32 18
Phytophthora_sojae_1.1 53 17
Phytophthora_infestans_T30-4_ 89 42
Phytophthora_capsici_ 23 14
Hyaloperonospora_arabidopsidis_22 8 8
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Fragilariopsis_cylindrus 1 1
Thalassiosira_pseudonana_CCMP1335 24 16
Perkinsus_marinus_ATCC_50983_ 74 24
Paramecium_tetraurelia_ 2 2
Tetrahymena_thermophila_SB210_1_ 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Symbiodinium_minutum_clade_B1_v1.2 164 85
Naegleria_gruberi_ 3 3
Guillardia_theta_CCMP2712_v1.0_ 84 36
Emiliania_huxleyi_CCMP1516_ 43 21
Thermobaculum_terrenum_ATCC_BAA-798 10 9
Leptolyngbya_sp._PCC_7376 1 1
Nostoc_punctiforme_PCC_73102 1 1
Nostoc_sp._PCC_7524 1 1
Mycoplasma_hyorhinis_GDL-1 1 1
Conexibacter_woesei_DSM_14684 5 5
Eggerthella_sp._YY7918 9 2
Eggerthella_lenta_DSM_2243 1 1
Slackia_heliotrinireducens_DSM_20476 1 1
Olsenella_uli_DSM_7084 1 1
Ilumatobacter_coccineus 9 6
Thermobispora_bispora_DSM_43833 1 1
Nakamurella_multipartita_DSM_44233 12 8
Acidothermus_cellulolyticus_11B 4 4
Modestobacter_marinus 4 4
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 11 4
Kineococcus_radiotolerans_SRS30216 4 4
Catenulispora_acidiphila_DSM_44928 24 22
Stackebrandtia_nassauensis_DSM_44728 4 4
Frankia_sp._EAN1pec 4 3
Frankia_alni_ACN14a 4 3
Thermobifida_fusca_YX 4 4
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 7 6
Thermomonospora_curvata_DSM_43183 3 3
Streptosporangium_roseum_DSM_43021 20 19
Kitasatospora_setae_KM-6054 12 12
Streptomyces_coelicolor_A3(2) 11 10
Streptomyces_sp._PAMC26508 13 10
Streptomyces_flavogriseus_ATCC_33331 12 10
Streptomyces_sp._SirexAA-E 8 6
Streptomyces_griseus_subsp._griseus_NBRC_13350 9 8
Streptomyces_bingchenggensis_BCW-1 11 10
Streptomyces_violaceusniger_Tu_4113 8 6
Streptomyces_avermitilis_MA-4680 10 9
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_scabiei_87.22 6 5
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 8 7
Actinosynnema_mirum_DSM_43827 6 6
Saccharopolyspora_erythraea_NRRL_2338 1 1
Amycolatopsis_mediterranei_U32 19 18
Kribbella_flavida_DSM_17836 16 16
Nocardioides_sp._JS614 2 2
Propionibacterium_propionicum_F0230a 3 1
Microlunatus_phosphovorus_NM-1 7 5
Salinispora_arenicola_CNS-205 6 4
Salinispora_tropica_CNB-440 9 6
Verrucosispora_maris_AB-18-032 13 10
Micromonospora_sp._L5 17 14
Micromonospora_aurantiaca_ATCC_27029 17 13
Actinoplanes_sp._N902-109 43 15
Actinoplanes_sp._SE50/110 19 12
Actinoplanes_missouriensis_431 13 12
Gordonia_sp._KTR9 1 1
Gordonia_polyisoprenivorans_VH2 1 1
Gordonia_bronchialis_DSM_43247 1 1
Nocardia_farcinica_IFM_10152 1 1
Mycobacterium_marinum_M 1 1
Corynebacterium_jeikeium_K411 1 1
Sanguibacter_keddieii_DSM_10542 11 5
Beutenbergia_cavernae_DSM_12333 8 3
Leifsonia_xyli_subsp._xyli_str._CTCB07 2 1
Microbacterium_testaceum_StLB037 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 2 1
Jonesia_denitrificans_DSM_20603 5 3
Brachybacterium_faecium_DSM_4810 2 1
Isoptericola_variabilis_225 3 1
Xylanimonas_cellulosilytica_DSM_15894 8 5
Cellulomonas_flavigena_DSM_20109 10 6
Cellulomonas_fimi_ATCC_484 17 10
[Cellvibrio]_gilvus_ATCC_13127 12 6
Arthrobacter_phenanthrenivorans_Sphe3 3 2
Arthrobacter_chlorophenolicus_A6 6 4
Arthrobacter_aurescens_TC1 5 3
Arthrobacter_arilaitensis_Re117 2 1
Arthrobacter_sp._Rue61a 3 2
Arthrobacter_sp._FB24 6 4
Micrococcus_luteus_NCTC_2665 1 1
Bifidobacterium_longum_subsp._longum_JDM301 1 1
Bifidobacterium_animalis_subsp._lactis_Bl-04 1 1
Bifidobacterium_dentium_Bd1 1 1
Bifidobacterium_breve_ACS-071-V-Sch8b 1 1
Bifidobacterium_bifidum_S17 1 1
Bifidobacterium_adolescentis_ATCC_15703 1 1
Actinomyces_sp._F0330 3 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 9 7
Dehalococcoides_ethenogenes_195 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 2 2
Anaerolinea_thermophila_UNI-1 2 1
Thermomicrobium_roseum_DSM_5159 3 1
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 10 7
Roseiflexus_sp._RS-1 4 3
Roseiflexus_castenholzii_DSM_13941 3 3
Chloroflexus_sp._MS-G 4 4
Chloroflexus_sp._Y-400-fl 9 8
Chloroflexus_aggregans_DSM_9485 3 3
Chloroflexus_aurantiacus_J-10-fl 9 8
Deinococcus_gobiensis_I-0 3 2
Deinococcus_deserti_VCD115 2 1
Deinococcus_maricopensis_DSM_21211 2 2
Deinococcus_geothermalis_DSM_11300 2 2
Deinococcus_proteolyticus_MRP 1 1
Deinococcus_radiodurans_R1 1 1
Meiothermus_ruber_DSM_1279 2 2
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Natranaerobius_thermophilus_JW/NM-WN-LF 1 1
Symbiobacterium_thermophilum_IAM_14863 3 3
Clostridium_clariflavum_DSM_19732 20 10
Eubacterium_siraeum 25 11
Clostridium_cellulolyticum_H10 22 9
Clostridium_thermocellum_ATCC_27405 18 8
Ethanoligenens_harbinense_YUAN-3 2 2
Faecalibacterium_prausnitzii 1 1
Ruminococcus_sp. 2 2
Ruminococcus_bromii 9 5
Ruminococcus_albus_7 57 56
Thermincola_potens_JR 13 8
Pelotomaculum_thermopropionicum_SI 2 2
Desulfosporosinus_acidiphilus_SJ4 13 7
Desulfosporosinus_orientis_DSM_765 8 4
Dehalobacter_sp._DCA 10 5
Dehalobacter_sp._CF 10 5
Syntrophobotulus_glycolicus_DSM_8271 7 3
Desulfitobacterium_hafniense_Y51 6 3
Desulfitobacterium_dehalogenans_ATCC_51507 3 1
Desulfotomaculum_acetoxidans_DSM_771 4 4
Desulfotomaculum_ruminis_DSM_2154 2 2
Acetobacterium_woodii_DSM_1030 1 1
Eubacterium_eligens_ATCC_27750 2 2
Eubacterium_limosum_KIST612 3 3
Clostridium_difficile_630 1 1
Clostridium_sticklandii_DSM_519 2 2
Clostridium_saccharolyticum_WM1 1 1
Clostridium_phytofermentans_ISDg 1 1
Clostridium_lentocellum_DSM_5427 11 7
[Ruminococcus]_obeum 9 9
Eubacterium_rectale_ATCC_33656 10 5
Coprococcus_sp._ART55/1 14 10
Roseburia_hominis_A2-183 1 1
Roseburia_intestinalis 22 15
Butyrivibrio_proteoclasticus_B316 2 2
Butyrivibrio_fibrisolvens 3 3
Syntrophothermus_lipocalidus_DSM_12680 11 4
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Heliobacterium_modesticaldum_Ice1 7 6
Alkaliphilus_oremlandii_OhILAs 1 1
Alkaliphilus_metalliredigens_QYMF 2 2
Candidatus_Arthromitus_sp._SFB-mouse-Japan 1 1
Clostridium_sp._BNL1100 29 11
Clostridium_ljungdahlii_DSM_13528 4 4
Clostridium_kluyveri_DSM_555 5 3
Clostridium_beijerinckii_NCIMB_8052 3 2
Clostridium_perfringens_ATCC_13124 11 10
Clostridium_cellulovorans_743B 25 10
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 3 3
Mahella_australiensis_50-1_BON 9 9
Caldicellulosiruptor_obsidiansis_OB47 7 3
Caldicellulosiruptor_kronotskyensis_2002 14 7
Caldicellulosiruptor_hydrothermalis_108 6 3
Caldicellulosiruptor_owensensis_OL 6 3
Caldicellulosiruptor_lactoaceticus_6A 3 2
Caldicellulosiruptor_kristjanssonii_177R1B 2 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 7 3
Caldicellulosiruptor_bescii_DSM_6725 6 4
Thermoanaerobacterium_xylanolyticum_LX-11 3 2
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 4 3
Tepidanaerobacter_acetatoxydans_Re1 2 2
Thermoanaerobacter_tengcongensis_MB4 1 1
Carboxydothermus_hydrogenoformans_Z-2901 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Ammonifex_degensii_KC4 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 2 2
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2 1
Thermoanaerobacter_sp._X514 2 1
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 3 2
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2 1
Halothermothrix_orenii_H_168 2 2
Enterococcus_hirae_ATCC_9790 5 4
Lactobacillus_kefiranofaciens_ZW3 1 1
Lactobacillus_crispatus_ST1 3 3
Lactobacillus_rhamnosus_Lc_705 1 1
Lactobacillus_johnsonii_FI9785 2 2
Lactobacillus_amylovorus_GRL1118 2 2
Lactobacillus_gasseri_ATCC_33323 1 1
Lactobacillus_helveticus_DPC_4571 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_BAA-365 1 1
Lactobacillus_acidophilus_30SC 2 2
Lactococcus_garvieae_ATCC_49156 1 1
Lactococcus_lactis_subsp._cremoris_MG1363 1 1
Streptococcus_intermedius_JTH08 1 1
Streptococcus_gallolyticus_UCN34 1 1
Streptococcus_oralis_Uo5 1 1
Streptococcus_gordonii_str._Challis_substr._CH1 1 1
Exiguobacterium_sp._MH3 1 1
Exiguobacterium_sp._AT1b 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Brevibacillus_brevis_NBRC_100599 7 6
Paenibacillus_sp._JDR-2 35 25
Paenibacillus_terrae_HPL-003 22 15
Paenibacillus_mucilaginosus_3016 71 45
Paenibacillus_polymyxa_M1 23 15
Bacillus_selenitireducens_MLS10 5 4
Listeria_welshimeri_serovar_6b_str._SLCC5334 3 3
Listeria_innocua_Clip11262 3 3
Listeria_seeligeri_serovar_1/2b_str._SLCC3954 1 1
Listeria_monocytogenes_serotype_4b_str._CLIP_80459 4 4
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 2 2
Lysinibacillus_sphaericus_C3-41 4 3
Oceanobacillus_iheyensis_HTE831 2 2
Anoxybacillus_flavithermus_WK1 4 4
Geobacillus_thermoleovorans_CCB_US3_UF5 2 2
Geobacillus_kaustophilus_HTA426 4 3
Geobacillus_sp._GHH01 4 4
Geobacillus_sp._WCH70 2 2
Geobacillus_thermodenitrificans_NG80-2 1 1
Halobacillus_halophilus_DSM_2266 1 1
Bacillus_sp._JS 1 1
Bacillus_sp._1NLA3E 4 3
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 2 2
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 5 5
Bacillus_halodurans_C-125 7 6
Bacillus_weihenstephanensis_KBAB4 10 10
Bacillus_thuringiensis_str._Al_Hakam 4 4
Bacillus_cereus_03BB102 4 4
Bacillus_anthracis_str._A0248 5 5
Bacillus_pseudofirmus_OF4 2 2
Bacillus_clausii_KSM-K16 5 5
Bacillus_cellulosilyticus_DSM_2522 5 5
Bacillus_pumilus_SAFR-032 1 1
Bacillus_megaterium_DSM_319 2 2
Candidatus_Cloacamonas_acidaminovorans 30 28
Gemmatimonas_aurantiaca_T-27 1 1
Melioribacter_roseus_P3M 18 15
Ignavibacterium_album_JCM_16511 23 20
Chloroherpeton_thalassium_ATCC_35110 7 6
Haliscomenobacter_hydrossis_DSM_1100 17 13
Saprospira_grandis_str._Lewin 5 5
Niastella_koreensis_GR20-10 23 20
Chitinophaga_pinensis_DSM_2588 19 13
Salinibacter_ruber_M8 14 10
Rhodothermus_marinus_DSM_4252 4 4
Flexibacter_litoralis_DSM_6794 15 14
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 8 5
Marivirga_tractuosa_DSM_4126 17 13
Fibrella_aestuarina 52 19
Leadbetterella_byssophila_DSM_17132 17 9
Dyadobacter_fermentans_DSM_18053 13 11
Cytophaga_hutchinsonii_ATCC_33406 11 9
Spirosoma_linguale_DSM_74 19 14
Runella_slithyformis_DSM_19594 13 11
Parabacteroides_distasonis_ATCC_8503 5 5
Tannerella_forsythia_ATCC_43037 17 11
Paludibacter_propionicigenes_WB4 15 11
Odoribacter_splanchnicus_DSM_20712 2 2
Candidatus_Azobacteroides_pseudotrichonymphae_genomovar._CFP2 1 1
Bacteroides_sp._CF50 2 2
Prevotella_melaninogenica_ATCC_25845 3 3
Prevotella_intermedia_17 5 5
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 2 2
Porphyromonas_asaccharolytica_DSM_20707 3 3
Porphyromonas_gingivalis_ATCC_33277 1 1
Alistipes_finegoldii_DSM_17242 7 5
Bacteroides_salanitronis_DSM_18170 2 2
Bacteroides_helcogenes_P_36-108 8 7
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 11 11
Bacteroides_fragilis_YCH46 7 7
Pedobacter_saltans_DSM_12145 9 8
Solitalea_canadensis_DSM_3403 5 5
Pedobacter_heparinus_DSM_2366 8 8
Sphingobacterium_sp._21 4 4
Fluviicola_taffensis_DSM_16823 15 8
Owenweeksia_hongkongensis_DSM_17368 56 19
Zunongwangia_profunda_SM-A87 1 1
Krokinobacter_sp._4H-3-7-5 5 5
Gramella_forsetii_KT0803 4 3
Lacinutrix_sp._5H-3-7-4 14 10
Maribacter_sp._HTCC2170 2 2
Robiginitalea_biformata_HTCC2501 6 6
Croceibacter_atlanticus_HTCC2559 10 6
Aequorivita_sublithincola_DSM_14238 6 5
Zobellia_galactanivorans 19 13
Muricauda_ruestringensis_DSM_13258 8 8
Cellulophaga_algicola_DSM_14237 13 7
Cellulophaga_lytica_DSM_7489 10 7
Flavobacteriaceae_bacterium_3519-10 14 14
Polaribacter_sp._MED152 5 5
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 2
Ornithobacterium_rhinotracheale_DSM_15997 5 5
Capnocytophaga_canimorsus_Cc5 6 6
Weeksella_virosa_DSM_16922 1 1
Flavobacterium_indicum_GPTSA100-9 25 10
Flavobacterium_psychrophilum_JIP02/86 6 3
Flavobacterium_branchiophilum_FL-15 5 3
Flavobacterium_columnare_ATCC_49512 9 7
Flavobacterium_johnsoniae_UW101 12 11
Fibrobacter_succinogenes_subsp._succinogenes_S85 5 3
Candidatus_Protochlamydia_amoebophila_UWE25 1 1
Isosphaera_pallida_ATCC_43644 3 2
Coraliomargarita_akajimensis_DSM_45221 2 2
Opitutus_terrae_PB90-1 9 4
Akkermansia_muciniphila_ATCC_BAA-835 2 2
Turneriella_parva_DSM_21527 15 14
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 3 2
Leptospira_interrogans_serovar_Lai_str._IPAV 6 4
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 7 4
Brachyspira_murdochii_DSM_12563 2 2
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_pilosicoli_95/1000 2 2
Brachyspira_hyodysenteriae_WA1 2 2
Borrelia_garinii_PBi 1 1
Borrelia_bissettii_DN127 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_B31 1 1
Borrelia_recurrentis_A1 1 1
Borrelia_duttonii_Ly 1 1
Borrelia_crocidurae_str._Achema 1 1
Borrelia_turicatae_91E135 1 1
Borrelia_hermsii_DAH 1 1
Spirochaeta_smaragdinae_DSM_11293 4 4
Spirochaeta_caldaria_DSM_7334 3 3
Treponema_azotonutricium_ZAS-9 15 8
Treponema_primitia_ZAS-2 7 5
Treponema_brennaborense_DSM_12168 10 6
Treponema_paraluiscuniculi_Cuniculi_A 2 2
Treponema_succinifaciens_DSM_2489 1 1
Treponema_pallidum_subsp._pallidum_SS14 3 3
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 3 3
Spirochaeta_thermophila_DSM_6192 3 3
Thermodesulfatator_indicus_DSM_15286 1 1
Thermodesulfobacterium_sp._OPB45 1 1
Desulfurispirillum_indicum_S5 1 1
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Deferribacter_desulfuricans_SSM1 1 1
Marinitoga_piezophila_KA3 21 10
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 11 8
Kosmotoga_olearia_TBF_19.5.1 10 3
Fervidobacterium_pennivorans_DSM_9078 7 3
Fervidobacterium_nodosum_Rt17-B1 6 3
Thermosipho_melanesiensis_BI429 2 2
Thermosipho_africanus_TCF52B 2 2
Thermotoga_lettingae_TMO 7 5
Thermotoga_thermarum_DSM_5069 3 3
Persephonella_marina_EX-H1 1 1
Hydrogenobaculum_sp._SN 1 1
Hydrogenobaculum_sp._HO 1 1
Hydrogenobaculum_sp._Y04AAS1 1 1
Dictyoglomus_turgidum_DSM_6724 3 3
Dictyoglomus_thermophilum_H-6-12 1 1
Caldisericum_exile_AZM16c01 7 4
Candidatus_Chloracidobacterium_thermophilum_B 1 1
Candidatus_Solibacter_usitatus_Ellin6076 10 8
Granulicella_tundricola_MP5ACTX9 2 2
Granulicella_mallensis_MP5ACTX8 14 10
Candidatus_Koribacter_versatilis_Ellin345 5 5
Terriglobus_saanensis_SP1PR4 8 5
Terriglobus_roseus_DSM_18391 3 3
Acidobacterium_capsulatum_ATCC_51196 5 4
Thermodesulfovibrio_yellowstonii_DSM_11347 2 2
Candidatus_Nitrospira_defluvii 5 4
Leptospirillum_ferrooxidans_C2-3 1 1
Candidatus_Methylomirabilis_oxyfera 3 2
candidate_division_WWE3_bacterium_RAAC2_WWE3_1 4 2
candidate_division_SR1_bacterium_RAAC1_SR1_1 3 3
Bacteriovorax_marinus_SJ 1 1
Bdellovibrio_bacteriovorus_HD100 11 8
Nautilia_profundicola_AmH 2 1
Nitratifractor_salsuginis_DSM_16511 1 1
Sulfurospirillum_deleyianum_DSM_6946 3 1
Sulfurospirillum_barnesii_SES-3 3 1
Arcobacter_sp._L 4 2
Arcobacter_nitrofigilis_DSM_7299 4 2
Arcobacter_butzleri_RM4018 3 1
Campylobacter_hominis_ATCC_BAA-381 2 1
Campylobacter_lari_RM2100 2 1
Campylobacter_concisus_13826 1 1
Campylobacter_jejuni_subsp._doylei_269.97 2 1
Campylobacter_sp._03-427 2 1
Campylobacter_fetus_subsp._fetus_82-40 2 1
uncultured_Sulfuricurvum_sp._RIFRC-1 2 1
Sulfuricurvum_kujiense_DSM_16994 2 1
Sulfurimonas_autotrophica_DSM_16294 3 2
Sulfurimonas_denitrificans_DSM_1251 2 1
Wolinella_succinogenes_DSM_1740 3 1
Helicobacter_cetorum_MIT_00-7128 2 1
Helicobacter_bizzozeronii_CIII-1 2 1
Helicobacter_hepaticus_ATCC_51449 2 1
Helicobacter_mustelae_12198 3 1
Helicobacter_felis_ATCC_49179 2 1
Helicobacter_cinaedi_PAGU611 3 1
Helicobacter_acinonychis_str._Sheeba 3 1
Helicobacter_pylori_B38 3 1
Nitratiruptor_sp._SB155-2 3 2
Sulfurovum_sp._NBC37-1 2 2
Desulfarculus_baarsii_DSM_2075 1 1
Desulfobacca_acetoxidans_DSM_11109 1 1
Syntrophus_aciditrophicus_SB 5 3
Desulfomonile_tiedjei_DSM_6799 3 2
Syntrophobacter_fumaroxidans_MPOB 6 5
Desulfurivibrio_alkaliphilus_AHT2 3 3
Desulfotalea_psychrophila_LSv54 2 2
Desulfobulbus_propionicus_DSM_2032 3 2
Desulfatibacillum_alkenivorans_AK-01 21 13
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfococcus_oleovorans_Hxd3 5 4
Desulfovibrio_alaskensis_G20 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Hippea_maritima_DSM_10411 2 1
Geobacter_daltonii_FRC-32 28 10
Geobacter_sp._M21 16 15
Geobacter_uraniireducens_Rf4 42 13
Geobacter_lovleyi_SZ 11 7
Geobacter_bemidjiensis_Bem 12 12
Geobacter_sulfurreducens_KN400 8 6
Geobacter_metallireducens_GS-15 14 6
Pelobacter_propionicus_DSM_2379 3 3
Pelobacter_carbinolicus_DSM_2380 1 1
Haliangium_ochraceum_DSM_14365 4 4
Sorangium_cellulosum_'So_ce_56' 2 2
Anaeromyxobacter_sp._Fw109-5 8 5
Anaeromyxobacter_dehalogenans_2CP-1 5 4
Stigmatella_aurantiaca_DW4/3-1 30 23
Corallococcus_coralloides_DSM_2259 21 16
Myxococcus_xanthus_DK_1622 14 10
Myxococcus_fulvus_HW-1 13 11
Azoarcus_sp._KH32C 2 2
Neisseria_meningitidis_alpha14 1 1
Thiomonas_arsenitoxydans 2 1
Leptothrix_cholodnii_SP-6 16 10
Cupriavidus_taiwanensis_LMG_19424 2 2
Ralstonia_solanacearum_CFBP2957 3 3
Burkholderia_thailandensis_E264 3 3
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_mallei_SAVP1 1 1
Ramlibacter_tataouinensis_TTB310 1 1
Delftia_sp._Cs1-4 2 2
Delftia_acidovorans_SPH-1 4 3
Polaromonas_naphthalenivorans_CJ2 1 1
Variovorax_paradoxus_S110 2 2
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 2 2
Collimonas_fungivorans_Ter331 1 1
Achromobacter_xylosoxidans 2 2
Sideroxydans_lithotrophicus_ES-1 3 2
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 1 1
Caulobacter_sp._K31 1 1
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 1 1
Roseobacter_denitrificans_OCh_114 2 2
Paracoccus_denitrificans_PD1222 1 1
Azospirillum_brasilense_Sp245 1 1
Polymorphum_gilvum_SL003B-26A1 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 1 1
Xanthobacter_autotrophicus_Py2 1 1
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_nodulans_ORS_2060 8 8
Ochrobactrum_anthropi_ATCC_49188 1 1
Sinorhizobium_medicae_WSM419 1 1
Sinorhizobium_meliloti_AK83 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 1 1
Agrobacterium_radiobacter_K84 1 1
Agrobacterium_sp._H13-3 1 1
Agrobacterium_vitis_S4 4 1
Saccharophagus_degradans_2-40 16 11
Teredinibacter_turnerae_T7901 2 2
Cellvibrio_japonicus_Ueda107 16 13
Actinobacillus_succinogenes_130Z 1 1
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 1 1
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 1 1
Vibrio_vulnificus_MO6-24/O 1 1
Vibrio_cholerae_O395 1 1
Photobacterium_profundum_SS9 1 1
Psychromonas_ingrahamii_37 6 4
Idiomarina_loihiensis_L2TR 1 1
Shewanella_piezotolerans_WP3 3 3
Shewanella_loihica_PV-4 1 1
Shewanella_halifaxensis_HAW-EB4 1 1
Shewanella_sediminis_HAW-EB3 2 2
Shewanella_denitrificans_OS217 5 4
Shewanella_oneidensis_MR-1 4 2
Shewanella_baltica_OS185 4 1
Shewanella_woodyi_ATCC_51908 11 3
Shewanella_violacea_DSS12 10 6
Shewanella_frigidimarina_NCIMB_400 1 1
Shewanella_putrefaciens_CN-32 4 2
Pseudoalteromonas_sp._SM9913 1 1
Pseudoalteromonas_atlantica_T6c 2 2
Pseudoalteromonas_haloplanktis_TAC125 3 2
Glaciecola_sp._4H-3-7+YE-5 5 3
Glaciecola_nitratireducens_FR1064 1 1
Marinobacter_adhaerens_HP15 4 4
Marinobacter_sp._BSs20148 2 2
Marinobacter_hydrocarbonoclasticus_ATCC_49840 4 4
Marinobacter_aquaeolei_VT8 5 5
Alteromonas_sp._SN2 2 2
Alteromonas_macleodii_str._'Deep_ecotype' 2 2
Hahella_chejuensis_KCTC_2396 10 7
Marinomonas_mediterranea_MMB-1 2 2
Halomonas_elongata_DSM_2581 1 1
Methylococcus_capsulatus_str._Bath 1 1
Rhodanobacter_denitrificans 4 2
Pseudoxanthomonas_spadix_BD-a59 1 1
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 3 2
Xanthomonas_albilineans_GPE_PC73 2 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 3 3
Thioalkalivibrio_sulfidophilus_HL-EbGr7 1 1
Thiocystis_violascens_DSM_198 1 1
Nitrosococcus_watsonii_C-113 1 1
Nitrosococcus_halophilus_Nc4 4 4
Nitrosococcus_oceani_ATCC_19707 1 1
Legionella_longbeachae_NSW150 2 2
Legionella_pneumophila_str._Corby 1 1
gamma_proteobacterium_HdN1 4 4
Photorhabdus_asymbiotica 1 1
Xenorhabdus_bovienii_SS-2004 3 2
Xenorhabdus_nematophila_ATCC_19061 1 1
Providencia_stuartii_MRSN_2154 3 2
Proteus_mirabilis_HI4320 3 2
Rahnella_sp._Y9602 2 2
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 1 1
Yersinia_pseudotuberculosis_IP_31758 3 3
Yersinia_pestis_Pestoides_F 3 3
Yersinia_enterocolitica_subsp._enterocolitica_8081 3 3
Serratia_sp._AS12 5 4
Serratia_sp._ATCC_39006 1 1
Serratia_plymuthica_AS9 5 4
Serratia_proteamaculans_568 1 1
Dickeya_dadantii_Ech703 2 2
Dickeya_zeae_Ech1591 3 3
Pectobacterium_wasabiae_WPP163 1 1
Pectobacterium_sp._SCC3193 2 2
Pectobacterium_atrosepticum_SCRI1043 1 1
Pectobacterium_carotovorum_subsp._carotovorum_PC1 2 2
Pantoea_sp._At-9b 2 2
Escherichia_blattae_DSM_4481 1 1
Enterobacteriaceae_bacterium_strain_FGI_57 1 1
Shigella_sonnei_Ss046 2 2
Shigella_flexneri_5_str._8401 2 2
Shigella_boydii_CDC_3083-94 2 2
Klebsiella_oxytoca_E718 2 2
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_aerogenes_KCTC_2190 1 1
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 1 1
Enterobacter_sp._R4-368 2 2
Enterobacter_sp._638 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Pseudomonas_sp._TKP 1 1
Pseudomonas_sp._UW4 4 3
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_syringae_pv._tomato_str._DC3000 5 3
Pseudomonas_fulva_12-X 1 1
Pseudomonas_putida_F1 1 1
Pseudomonas_protegens_Pf-5 2 2
Pseudomonas_fluorescens_SBW25 2 2
Pseudomonas_aeruginosa_UCBPP-PA14 2 2
Pseudomonas_sp._VLB120 2 2
Psychrobacter_arcticus_273-4 1 1
Acinetobacter_oleivorans_DR1 1 1
Acinetobacter_baumannii_ATCC_17978 1 1
Acinetobacter_sp._ADP1 1 1
Cycloclasticus_sp._P1 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1
Candidatus_Caldiarchaeum_subterraneum 1 1
Cenarchaeum_symbiosum_A 4 2
Nitrosopumilus_maritimus_SCM1 47 3
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Sulfolobus_tokodaii_str._7 1 1
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Sulfolobus_acidocaldarius_DSM_639 1 1
Methanocella_arvoryzae_MRE50 1 1
Methanosaeta_concilii_GP6 3 3
Methanohalobium_evestigatum_Z-7303 2 2
Methanococcoides_burtonii_DSM_6242 4 3
Methanosarcina_acetivorans_C2A 3 1
Methanohalophilus_mahii_DSM_5219 5 4
Methanosphaerula_palustris_E1-9c 1 1
Methanocorpusculum_labreanum_Z 1 1
Archaeoglobus_veneficus_SNP6 1 1
Archaeoglobus_fulgidus_DSM_4304 1 1
Pyrococcus_furiosus_COM1 1 1
Picrophilus_torridus_DSM_9790 1 1
Halopiger_xanaduensis_SH-6 1 1
Haloterrigena_turkmenica_DSM_5511 1 1
Natrialba_magadii_ATCC_43099 2 2
Halorubrum_lacusprofundi_ATCC_49239 5 3
Halogeometricum_borinquense_DSM_11551 2 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halorhabdus_utahensis_DSM_12940 14 11
Aciduliprofundum_sp._MAR08-339 7 6
Aciduliprofundum_boonei_T469 12 10

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   551 244
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   566 204
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   167 75
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   137 50
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   311 87
Cryptococcus_neoformans_var._grubii_H99_ 1 1
Cryptococcus_neoformans_B-3501A_ 1 1
Cryptococcus_neoformans_JEC21_ 1 1
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 2 2
Coccidioides_posadasii_str._Silveira_ 2 2
Coccidioides_immitis_RMSCC_3703_ 2 2
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 2 2
Histoplasma_capsulatum_H143 2 2
Histoplasma_capsulatum_H88 2 2
Histoplasma_capsulatum_G186AR 2 2
Aspergillus_fumigatus_A1163_ 2 2
Candida_albicans_WO-1_ 1 1
Saccharomyces_cerevisiae_UC5 1 1
Saccharomyces_cerevisiae_PW5 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 1 1
Saccharomyces_cerevisiae_YJM269 2 2
Saccharomyces_cerevisiae_T7 1 1
Saccharomyces_cerevisiae_FostersB 2 2
Saccharomyces_cerevisiae_FostersO 1 1
Saccharomyces_cerevisiae_Vin13 1 1
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 2 2
Saccharomyces_cerevisiae_W303 1 1
Saccharomyces_cerevisiae_JAY291 1 1
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_YJM789_ 2 2
Saccharomyces_cerevisiae_YJM789 1 1
Saccharomyces_cerevisiae_RM11-1a 1 1
Saccharomyces_cerevisiae_RM11-1a_ 2 2
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   2 2
Schizosaccharomyces_pombe_972h-_ 1 1
Batrachochytrium_dendrobatidis_JEL423_ 5 4
Batrachochytrium_dendrobatidis_JAM81_ 5 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   3 3
Hordeum_vulgare_22   (Domesticated barley)   12 12
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   5 5
Trypanosoma_brucei_Lister_427_v4.1 21 2
Oscillatoria_acuminata_PCC_6304 1 1
Cyanothece_sp._PCC_7822 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Mycoplasma_hyorhinis_SK76 1 1
Mycoplasma_hyorhinis_MCLD 1 1
Mycoplasma_hyorhinis_HUB-1 1 1
Mycoplasma_hyorhinis_DBS_1050 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Frankia_sp._EuI1c 5 5
Frankia_sp._CcI3 2 2
Nocardiopsis_alba_ATCC_BAA-2165 4 4
Streptomyces_albus_J1074 6 5
Streptomyces_rapamycinicus_NRRL_5491 3 2
Streptomyces_davawensis_JCM_4913 15 13
Streptomyces_fulvissimus_DSM_40593 11 10
Streptomyces_venezuelae_ATCC_10712 8 7
Streptomyces_collinus_Tu_365 7 6
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 4 4
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 8 7
Saccharothrix_espanaensis_DSM_44229 16 14
Amycolatopsis_mediterranei_RB 19 18
Amycolatopsis_mediterranei_S699 19 18
Amycolatopsis_mediterranei_S699 19 18
Amycolatopsis_orientalis_HCCB10007 16 13
Propionibacterium_acnes_ATCC_11828 1 1
Actinoplanes_friuliensis_DSM_7358 43 18
Leifsonia_xyli_subsp._cynodontis_DSM_46306 3 2
Clavibacter_michiganensis_subsp._sepedonicus 2 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 9 4
Bifidobacterium_longum_NCC2705 1 1
Bifidobacterium_longum_DJO10A 1 1
Bifidobacterium_longum_subsp._infantis_157F 1 1
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._infantis_ATCC_15697_=_JCM_1222 2 2
Bifidobacterium_longum_subsp._longum_KACC_91563 1 1
Bifidobacterium_longum_subsp._longum_BBMN68 1 1
Bifidobacterium_longum_subsp._longum_F8 1 1
Bifidobacterium_longum_subsp._longum_JCM_1217 1 1
Bifidobacterium_thermophilum_RBL67 1 1
Bifidobacterium_animalis_subsp._animalis_ATCC_25527 1 1
Bifidobacterium_animalis_subsp._lactis_Bl12 1 1
Bifidobacterium_animalis_subsp._lactis_B420 1 1
Bifidobacterium_animalis_subsp._lactis_ATCC_27673 1 1
Bifidobacterium_animalis_subsp._lactis_BLC1 1 1
Bifidobacterium_animalis_subsp._lactis_CNCM_I-2494 1 1
Bifidobacterium_animalis_subsp._lactis_Bi-07 1 1
Bifidobacterium_animalis_subsp._lactis_V9 1 1
Bifidobacterium_animalis_subsp._lactis_DSM_10140 1 1
Bifidobacterium_animalis_subsp._lactis_BB-12 1 1
Bifidobacterium_animalis_subsp._lactis_AD011 1 1
Bifidobacterium_breve_UCC2003 1 1
Bifidobacterium_asteroides_PRL2011 2 2
Bifidobacterium_bifidum_PRL2010 1 1
Bifidobacterium_bifidum_BGN4 1 1
Actinomyces_graevenitzii_C83_ 2 1
Actinomyces_odontolyticus_ATCC_17982 3 2
Actinomyces_viscosus_C505 2 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Chthonomonas_calidirosea_T49 5 5
Deinococcus_peraridilitoris_DSM_19664 1 1
Thermus_thermophilus_JL-18 1 1
Eubacterium_siraeum_V10Sc8a 33 13
Clostridium_thermocellum_DSM_1313 18 7
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 8 3
Faecalibacterium_prausnitzii_L2-6 1 1
Ruminococcus_champanellensis_18P13 3 2
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 4 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 3 1
Desulfitobacterium_hafniense_DCB-2 7 4
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Roseburia_intestinalis_XB6B4 24 16
Candidatus_Arthromitus_sp._SFB-rat-Yit 2 2
Candidatus_Arthromitus_sp._SFB-mouse-Yit 1 1
Clostridium_sp._SY8519 13 13
Clostridium_saccharobutylicum_DSM_13864 3 2
Clostridium_autoethanogenum_DSM_10061 4 4
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 4 3
Clostridium_kluyveri_NBRC_12016 4 2
Clostridium_perfringens_SM101 3 3
Clostridium_perfringens_str._13 12 11
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_E3_str._Alaska_E43 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 3 3
Clostridium_acetobutylicum_EA_2018 3 3
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 4 3
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermoanaerobacter_sp._X513 2 1
Halobacteroides_halobius_DSM_5150 1 1
Carnobacterium_maltaromaticum_LMA28 4 4
Enterococcus_mundtii_QU_25 15 11
Enterococcus_casseliflavus_EC20 1 1
Enterococcus_faecalis_D32 1 1
Enterococcus_faecalis_OG1RF 1 1
Enterococcus_faecalis_V583 1 1
Lactobacillus_rhamnosus_LOCK908 1 1
Lactobacillus_rhamnosus_LOCK900 1 1
Lactobacillus_rhamnosus_ATCC_8530 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_rhamnosus_GG 1 1
Lactobacillus_johnsonii_N6.2 1 1
Lactobacillus_johnsonii_DPC_6026 1 1
Lactobacillus_johnsonii_NCC_533 1 1
Lactobacillus_amylovorus_GRL_1112 2 2
Lactobacillus_helveticus_R0052 2 2
Lactobacillus_helveticus_H10 2 2
Lactobacillus_helveticus_CNRZ32 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ND02 2 2
Lactobacillus_delbrueckii_subsp._bulgaricus_ATCC_11842 1 1
Lactobacillus_delbrueckii_subsp._bulgaricus_2038 1 1
Lactobacillus_acidophilus_La-14 2 2
Lactobacillus_acidophilus_NCFM 2 2
Lactococcus_garvieae_Lg2 1 1
Lactococcus_lactis_subsp._lactis_IO-1 1 1
Lactococcus_lactis_subsp._cremoris_KW2 1 1
Lactococcus_lactis_subsp._cremoris_A76 1 1
Lactococcus_lactis_subsp._cremoris_NZ9000 1 1
Lactococcus_lactis_subsp._cremoris_SK11 1 1
Streptococcus_intermedius_B196 1 1
Streptococcus_intermedius_C270 1 1
Streptococcus_anginosus_C238 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_BAA-2069 1 1
Streptococcus_gallolyticus_subsp._gallolyticus_ATCC_43143 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_salivarius_JIM8777 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 1 1
Thermobacillus_composti_KWC4 14 6
Paenibacillus_sp._Y412MC10 20 16
Paenibacillus_mucilaginosus_KNP414 75 49
Paenibacillus_mucilaginosus_K02 69 45
Paenibacillus_larvae_subsp._larvae_DSM_25430 5 5
Paenibacillus_polymyxa_CR1 16 11
Paenibacillus_polymyxa_SC2 23 15
Paenibacillus_polymyxa_E681 20 13
Listeria_monocytogenes_EGD_sequence 3 3
Listeria_monocytogenes_N53-1 3 3
Listeria_monocytogenes_La111 3 3
Listeria_monocytogenes_serotype_4b_str._LL195 4 4
Listeria_monocytogenes_07PF0776 4 4
Listeria_monocytogenes_M7 5 5
Listeria_monocytogenes_J1-220 4 4
Listeria_monocytogenes_J1816 3 3
Listeria_monocytogenes_SLCC2376 4 4
Listeria_monocytogenes_SLCC5850 3 3
Listeria_monocytogenes_ATCC_19117 4 4
Listeria_monocytogenes_L312 4 4
Listeria_monocytogenes_SLCC2479 3 3
Listeria_monocytogenes_SLCC7179 3 3
Listeria_monocytogenes_SLCC2540 3 3
Listeria_monocytogenes_SLCC2378 4 4
Listeria_monocytogenes_serotype_1/2b_str._SLCC2755 3 3
Listeria_monocytogenes_serotype_1/2c_str._SLCC2372 3 3
Listeria_monocytogenes_serotype_7_str._SLCC2482 3 3
Listeria_monocytogenes_08-5578 3 3
Listeria_monocytogenes_08-5923 3 3
Listeria_monocytogenes_L99 5 5
Listeria_monocytogenes_HCC23 5 5
Listeria_monocytogenes_10403S 3 3
Listeria_monocytogenes_J0161 2 2
Listeria_monocytogenes_Finland_1998 3 3
Listeria_monocytogenes_FSL_R2-561 3 3
Listeria_monocytogenes_serotype_4b_str._F2365 4 4
Listeria_monocytogenes_EGD-e 3 3
Geobacillus_sp._C56-T3 2 2
Geobacillus_sp._Y4.1MC1 1 1
Geobacillus_sp._Y412MC52 2 2
Geobacillus_sp._Y412MC61 2 2
Amphibacillus_xylanus_NBRC_15112 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 3 3
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 2 2
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 2 2
Bacillus_amyloliquefaciens_IT-45 3 3
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 3 3
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_amyloliquefaciens_DSM_7 2 2
Bacillus_licheniformis_9945A 2 2
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_XF-1 2 2
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_BSn5 1 1
Bacillus_subtilis_subsp._subtilis_str._BAB-1 1 1
Bacillus_subtilis_subsp._subtilis_str._BSP1 1 1
Bacillus_subtilis_subsp._subtilis_str._RO-NN-1 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_subtilis_subsp._spizizenii_TU-B-10 1 1
Bacillus_subtilis_subsp._spizizenii_str._W23 1 1
Bacillus_subtilis_subsp._natto_BEST195 1 1
Bacillus_licheniformis_DSM_13_=_ATCC_14580 5 5
Bacillus_infantis_NRRL_B-14911 3 3
Bacillus_cereus_subsp._cytotoxis_NVH_391-98 7 5
Bacillus_toyonensis_BCT-7112 4 4
Bacillus_thuringiensis_HD-771 6 6
Bacillus_thuringiensis_HD-789 6 6
Bacillus_thuringiensis_MC28 12 12
Bacillus_thuringiensis_serovar_chinensis_CT-43 7 7
Bacillus_thuringiensis_YBT-1518 8 8
Bacillus_thuringiensis_Bt407 6 6
Bacillus_thuringiensis_serovar_konkukian_str._97-27 5 5
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 7 7
Bacillus_thuringiensis_BMB171 4 4
Bacillus_thuringiensis_serovar_finitimus_YBT-020 4 4
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 7 7
Bacillus_cereus_FRI-35 4 4
Bacillus_cereus_biovar_anthracis_str._CI 4 4
Bacillus_cereus_AH820 4 4
Bacillus_cereus_AH187 7 6
Bacillus_cereus_B4264 5 5
Bacillus_cereus_G9842 8 8
Bacillus_cereus_Q1 4 4
Bacillus_cereus_F837/76 4 4
Bacillus_cereus_NC7401 5 5
Bacillus_cereus_E33L 5 5
Bacillus_cereus_ATCC_14579 3 3
Bacillus_cereus_ATCC_10987 4 4
Bacillus_anthracis_str._H9401 5 5
Bacillus_anthracis_str._CDC_684 5 5
Bacillus_anthracis_str._'Ames_Ancestor' 5 5
Bacillus_anthracis_str._Sterne 5 5
Bacillus_anthracis_str._Ames 5 5
Bacillus_megaterium_WSH-002 2 2
Bacillus_megaterium_QM_B1551 2 2
Salinibacter_ruber_DSM_13855 9 7
Rhodothermus_marinus_SG0.5JP17-172 1 1
Echinicola_vietnamensis_DSM_17526 6 5
Emticicia_oligotrophica_DSM_17448 20 16
Prevotella_sp._oral_taxon_299_str._F0039 4 4
Prevotella_dentalis_DSM_3688 10 9
Porphyromonas_gingivalis_TDC60 1 1
Porphyromonas_gingivalis_W83 1 1
Alistipes_shahii_WAL_8301 7 7
Bacteroides_xylanisolvens_XB1A 5 5
Bacteroides_fragilis_638R 10 8
Bacteroides_fragilis_NCTC_9343 10 8
Nonlabens_dokdonensis_DSW-6 24 9
Psychroflexus_torquis_ATCC_700755 3 3
Riemerella_anatipestifer_RA-CH-2 2 2
Riemerella_anatipestifer_RA-CH-1 1 1
Riemerella_anatipestifer_RA-GD 2 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 2 2
Fibrobacter_succinogenes_subsp._succinogenes_S85 5 3
Singulisphaera_acidiphila_DSM_18658 35 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 3 2
Leptospira_interrogans_serovar_Lai_str._56601 6 4
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 6 4
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 7 4
Brachyspira_pilosicoli_WesB 2 2
Brachyspira_pilosicoli_B2904 2 2
Brachyspira_pilosicoli_P43/6/78 2 2
Borrelia_garinii_NMJW1 1 1
Borrelia_garinii_BgVir 1 1
Borrelia_afzelii_HLJ01 1 1
Borrelia_afzelii_PKo 1 1
Borrelia_burgdorferi_CA382 1 1
Borrelia_burgdorferi_JD1 1 1
Borrelia_burgdorferi_N40 1 1
Borrelia_burgdorferi_ZS7 1 1
Borrelia_miyamotoi_LB-2001 1 1
Treponema_pedis_str._T_A4 2 2
Treponema_pallidum_str._Fribourg-Blanc 2 2
Treponema_pallidum_subsp._pertenue_str._Gauthier 2 2
Treponema_pallidum_subsp._pertenue_str._CDC2 2 2
Treponema_pallidum_subsp._pertenue_str._SamoaD 2 2
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 2 2
Treponema_pallidum_subsp._pallidum_str._Nichols 2 2
Spirochaeta_thermophila_DSM_6578 2 2
Leptospirillum_ferriphilum_ML-04 1 1
Bdellovibrio_exovorus_JSS 2 2
Bdellovibrio_bacteriovorus_str._Tiberius 10 7
Arcobacter_butzleri_7h1h 3 1
Arcobacter_butzleri_ED-1 3 1
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 3 1
Campylobacter_jejuni_RM1221 2 1
Campylobacter_jejuni_subsp._jejuni_00-2544 2 1
Campylobacter_jejuni_subsp._jejuni_00-2538 2 1
Campylobacter_jejuni_subsp._jejuni_00-2426 2 1
Campylobacter_jejuni_subsp._jejuni_00-2425 2 1
Campylobacter_jejuni_subsp._jejuni_PT14 2 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 2 1
Campylobacter_jejuni_subsp._jejuni_S3 2 1
Campylobacter_jejuni_subsp._jejuni_M1 3 1
Campylobacter_jejuni_subsp._jejuni_IA3902 2 1
Campylobacter_jejuni_subsp._jejuni_81116 3 1
Campylobacter_jejuni_subsp._jejuni_81-176 2 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 2 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 2 1
Campylobacter_coli_76339 2 1
Campylobacter_coli_15-537360 2 1
Campylobacter_coli_CVM_N29710 2 1
Helicobacter_cetorum_MIT_99-5656 3 1
Helicobacter_pylori_BM012S 2 1
Helicobacter_pylori_BM012A 2 1
Helicobacter_pylori_SouthAfrica20 2 1
Helicobacter_pylori_UM298 2 1
Helicobacter_pylori_UM066 2 1
Helicobacter_pylori_UM037 3 1
Helicobacter_pylori_UM299 2 1
Helicobacter_pylori_UM032 2 1
Helicobacter_pylori_OK310 2 1
Helicobacter_pylori_OK113 3 1
Helicobacter_pylori_Rif2 2 1
Helicobacter_pylori_Rif1 2 1
Helicobacter_pylori_HUP-B14 3 1
Helicobacter_pylori_PeCan18 2 1
Helicobacter_pylori_Shi169 2 1
Helicobacter_pylori_Shi112 2 1
Helicobacter_pylori_Shi417 2 1
Helicobacter_pylori_XZ274 2 1
Helicobacter_pylori_Aklavik86 2 1
Helicobacter_pylori_Aklavik117 3 1
Helicobacter_pylori_SNT49 3 1
Helicobacter_pylori_Puno135 2 1
Helicobacter_pylori_Puno120 2 1
Helicobacter_pylori_ELS37 3 1
Helicobacter_pylori_Gambia94/24 2 1
Helicobacter_pylori_SouthAfrica7 2 1
Helicobacter_pylori_India7 2 1
Helicobacter_pylori_Lithuania75 3 1
Helicobacter_pylori_2017 2 1
Helicobacter_pylori_2018 2 1
Helicobacter_pylori_908 2 1
Helicobacter_pylori_F57 2 1
Helicobacter_pylori_F30 2 1
Helicobacter_pylori_F16 2 1
Helicobacter_pylori_Sat464 2 1
Helicobacter_pylori_Cuz20 3 1
Helicobacter_pylori_PeCan4 3 1
Helicobacter_pylori_SJM180 2 1
Helicobacter_pylori_B8 2 1
Helicobacter_pylori_52 2 1
Helicobacter_pylori_v225d 2 1
Helicobacter_pylori_83 2 1
Helicobacter_pylori_35A 2 1
Helicobacter_pylori_P12 2 1
Helicobacter_pylori_G27 2 1
Helicobacter_pylori_Shi470 2 1
Helicobacter_pylori_HPAG1 2 1
Helicobacter_pylori_51 2 1
Helicobacter_pylori_F32 3 1
Helicobacter_pylori_J99 3 1
Helicobacter_pylori_26695 2 1
Helicobacter_pylori_26695 2 1
Desulfocapsa_sulfexigens_DSM_10523 2 1
Desulfobacula_toluolica_Tol2 3 2
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 2 2
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Geobacter_sp._M18 28 26
Geobacter_sulfurreducens_PCA 8 6
Sorangium_cellulosum_So0157-2 4 4
Anaeromyxobacter_sp._K 7 6
Anaeromyxobacter_dehalogenans_2CP-C 5 5
Myxococcus_stipitatus_DSM_14675 17 14
Neisseria_meningitidis_G2136 1 1
Ralstonia_solanacearum_FQY_4 2 2
Ralstonia_solanacearum_Po82 2 2
Ralstonia_solanacearum_PSI07 2 2
Ralstonia_solanacearum_CMR15 3 3
Ralstonia_solanacearum_GMI1000 3 3
Burkholderia_sp._YI23 1 1
Burkholderia_thailandensis_MSMB121 2 2
Burkholderia_pseudomallei_MSHR305 1 1
Burkholderia_pseudomallei_NCTC_13179 1 1
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1026b 2 2
Burkholderia_pseudomallei_MSHR346 1 1
Burkholderia_pseudomallei_668 1 1
Burkholderia_pseudomallei_1710b 3 3
Burkholderia_pseudomallei_K96243 1 1
Burkholderia_mallei_NCTC_10229 1 1
Burkholderia_mallei_NCTC_10247 1 1
Burkholderia_mallei_ATCC_23344 1 1
Burkholderia_ambifaria_MC40-6 1 1
Burkholderia_cepacia_GG4 1 1
Candidatus_Symbiobacter_mobilis_Comamonadaceae_bacterium_CR 1 1
Alicycliphilus_denitrificans_BC 2 2
Variovorax_paradoxus_B4 2 2
Variovorax_paradoxus_EPS 1 1
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 1 1
Caulobacter_crescentus_CB15 1 1
Octadecabacter_arcticus_238 1 1
Rhodobacter_sphaeroides_ATCC_17025 1 1
Sinorhizobium_meliloti_SM11 1 1
Simiduia_agarivorans_SA1_=_DSM_21679 14 10
Mannheimia_haemolytica_USDA-ARS-USMARC-185 1 1
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_sp._EJY3 2 2
Vibrio_cholerae_M66-2 1 1
Vibrio_cholerae_O395 1 1
Vibrio_cholerae_IEC224 2 2
Vibrio_cholerae_MJ-1236 1 1
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 1 1
Idiomarina_loihiensis_GSL_199 1 1
Shewanella_sp._W3-18-1 5 3
Shewanella_sp._ANA-3 3 1
Shewanella_baltica_BA175 4 1
Shewanella_baltica_OS678 5 2
Shewanella_baltica_OS117 4 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 5 2
Shewanella_baltica_OS155 4 1
Shewanella_sp._MR-7 3 3
Shewanella_putrefaciens_200 3 1
Glaciecola_psychrophila_170 2 2
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 2 2
Alteromonas_macleodii_str._'Ionian_Sea_U8' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U7' 1 1
Alteromonas_macleodii_str._'Ionian_Sea_U4' 1 1
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 1 1
Alteromonas_macleodii_AltDE1 2 2
Alteromonas_macleodii_str._'English_Channel_673' 3 3
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_str._'Black_Sea_11' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Stenotrophomonas_maltophilia_D457 6 4
Stenotrophomonas_maltophilia_JV3 2 2
Stenotrophomonas_maltophilia_R551-3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 3 2
Xanthomonas_axonopodis_Xac29-1 3 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 1 1
Xanthomonas_campestris_pv._campestris_str._8004 2 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2 2
Thioflavicoccus_mobilis_8321 3 3
Legionella_pneumophila_2300/99_Alcoy 1 1
Proteus_mirabilis_BB2000 1 1
Morganella_morganii_subsp._morganii_KT 4 2
Edwardsiella_tarda_C07-087 1 1
Rahnella_aquatilis_HX2 2 2
Yersinia_pseudotuberculosis_PB1/+ 3 3
Yersinia_pseudotuberculosis_YPIII 4 4
Yersinia_pseudotuberculosis_IP_32953 3 3
Yersinia_pestis_biovar_Microtus_str._91001 2 2
Yersinia_pestis_A1122 3 3
Yersinia_pestis_Z176003 3 3
Yersinia_pestis_D182038 3 3
Yersinia_pestis_D106004 3 3
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 3 3
Yersinia_pestis_Nepal516 3 3
Yersinia_pestis_Antiqua 3 3
Yersinia_pestis_Angola 3 3
Yersinia_pestis_CO92 3 3
Yersinia_pestis_KIM10+ 3 3
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 2 2
Yersinia_enterocolitica_subsp._palearctica_Y11 2 2
Serratia_sp._AS13 5 4
Serratia_plymuthica_S13 1 1
Serratia_plymuthica_4Rx13 5 4
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 1 1
Dickeya_dadantii_Ech586 2 2
Dickeya_dadantii_3937 5 5
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 1 1
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_AJ13355 1 1
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Shigella_sonnei_53G 3 3
Shigella_flexneri_2002017 2 2
Shigella_flexneri_2a_str._2457T 1 1
Shigella_flexneri_2a_str._301 2 2
Shigella_boydii_Sb227 2 2
Salmonella_bongori_N268-08 1 1
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 2 2
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 1 1
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 2 2
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 1 1
Salmonella_enterica_serovar_Bovismorbificans_genomics 1 1
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 1 1
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 1 1
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Klebsiella_oxytoca_KCTC_1686 5 4
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 2 2
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_aerogenes_EA1509E 2 2
Escherichia_coli_E._coli_PMV-1 3 3
Escherichia_coli_JJ1886 4 4
Escherichia_coli_LY180 1 1
Escherichia_coli_O7:K1_str._CE10 4 4
Escherichia_coli_O104:H4_str._2009EL-2050 4 4
Escherichia_coli_O104:H4_str._2009EL-2071 4 4
Escherichia_coli_O104:H4_str._2011C-3493 3 3
Escherichia_coli_NA114 2 2
Escherichia_coli_str._'clone_D_i2' 1 1
Escherichia_coli_str._'clone_D_i14' 1 1
Escherichia_coli_UM146 2 2
Escherichia_coli_042 4 4
Escherichia_coli_Xuzhou21 5 5
Escherichia_coli_IHE3034 5 5
Escherichia_coli_UMNK88 3 3
Escherichia_coli_O83:H1_str._NRG_857C 2 2
Escherichia_coli_ABU_83972 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_KO11FL 1 1
Escherichia_coli_LF82 2 2
Escherichia_coli_ED1a 2 2
Escherichia_coli_IAI39 2 2
Escherichia_coli_UMN026 4 4
Escherichia_coli_55989 4 4
Escherichia_coli_S88 3 3
Escherichia_coli_IAI1 2 2
Escherichia_coli_W 1 1
Escherichia_coli_W 1 1
Escherichia_coli_ATCC_8739 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_BL21(DE3) 1 1
Escherichia_coli_SMS-3-5 1 1
Escherichia_coli_SE15 1 1
Escherichia_coli_SE11 4 4
Escherichia_coli_APEC_O1 5 5
Escherichia_coli_O103:H2_str._12009 9 9
Escherichia_coli_UTI89 3 3
Escherichia_coli_536 1 1
Escherichia_coli_HS 1 1
Escherichia_coli_ETEC_H10407 3 3
Escherichia_coli_O55:H7_str._RM12579 8 8
Escherichia_coli_O55:H7_str._CB9615 7 7
Escherichia_coli_O26:H11_str._11368 10 10
Escherichia_coli_CFT073 2 2
Escherichia_coli_O111:H-_str._11128 8 8
Escherichia_coli_O127:H6_str._E2348/69 3 3
Escherichia_coli_O157:H7_str._TW14359 9 9
Escherichia_coli_O157:H7_str._EC4115 10 10
Escherichia_coli_O157:H7_str._Sakai 6 6
Escherichia_coli_O157:H7_str._EDL933 8 8
Escherichia_coli_BW2952 1 1
Escherichia_coli_B_str._REL606 1 1
Enterobacter_cloacae_SCF1 1 1
Enterobacter_cloacae_EcWSU1 2 2
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Pseudomonas_syringae_pv._phaseolicola_1448A 2 1
Pseudomonas_syringae_pv._syringae_B728a 3 2
Pseudomonas_putida_H8234 1 1
Pseudomonas_putida_HB3267 1 1
Pseudomonas_putida_DOT-T1E 1 1
Pseudomonas_putida_BIRD-1 1 1
Pseudomonas_putida_W619 1 1
Pseudomonas_putida_ND6 1 1
Pseudomonas_putida_GB-1 1 1
Pseudomonas_protegens_CHA0 2 2
Pseudomonas_fluorescens_A506 1 1
Pseudomonas_fluorescens_R124 1 1
Pseudomonas_aeruginosa_SCV20265 2 2
Pseudomonas_aeruginosa_MTB-1 2 2
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_RP73 2 2
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 2 2
Pseudomonas_aeruginosa_PA1 2 2
Pseudomonas_aeruginosa_DK2 2 2
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 2 2
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 3 3
Pseudomonas_aeruginosa_PAO1 2 2
Acinetobacter_baumannii_ZW85-1 1 1
Acinetobacter_baumannii_MDR-TJ 1 1
Acinetobacter_baumannii__ATCC_19606 2 1
Acinetobacter_baumannii_AB307-0294 1 1
Acinetobacter_baumannii_AB0057 1 1
Cycloclasticus_zancles_7-ME 1 1
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 5 2
Sulfolobus_islandicus_LAL14/1 1 1
Sulfolobus_islandicus_REY15A 1 1
Sulfolobus_islandicus_HVE10/4 1 1
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_M.16.27 1 1
Sulfolobus_islandicus_M.14.25 1 1
Sulfolobus_islandicus_M.16.4 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 1 1
Sulfolobus_acidocaldarius_Ron12/I 1 1
Sulfolobus_acidocaldarius_N8 1 1
Methanomethylovorans_hollandica_DSM_15978 7 5
Methanolobus_psychrophilus_R15 2 2
Pyrococcus_furiosus_DSM_3638 1 1
Ferroplasma_acidarmanus_fer1 1 1
Halovivax_ruber_XH-70 3 1
Natronobacterium_gregoryi_SP2 4 4
Halorhabdus_tiamatea_SARL4B 9 8

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   739 219
Pan_troglodytes_69_2.1.4   (Chimpanzee)   520 192
Gorilla_gorilla_69_3.1   (Western gorilla)   537 190
Pongo_abelii_69_2   (Sumatran orangutan)   539 194
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   536 190
Macaca_mulatta_69_1   (Rhesus monkey)   490 199
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   562 204
Otolemur_garnettii_69_3   (Small-eared galago)   482 196
Microcebus_murinus_69_1   (Gray mouse lemur)   476 174
Rattus_norvegicus_69_3.4   (Norway rat)   458 198
Mus_musculus_69_38   (House mouse)   518 213
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   468 168
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   493 189
Cavia_porcellus_69_3   (Domestic guinea pig)   533 195
Oryctolagus_cuniculus_69_2   (Rabbit)   524 188
Ochotona_princeps_69   (American pika)   481 168
Tupaia_belangeri_69   (Northern tree shrew)   422 156
Sus_scrofa_69_10.2   (Pig)   448 206
Bos_taurus_69_3.1   (Cattle)   484 199
Vicugna_pacos_69_1   (Alpaca)   344 114
Tursiops_truncatus_69_1   (Bottlenose dolphin)   526 189
Mustela_putorius_furo_69_1.0   (Domestic ferret)   582 213
Ailuropoda_melanoleuca_69_1   (Giant panda)   575 204
Canis_familiaris_69_3.1   (Dog)   591 211
Felis_catus_69   (Domestic cat)   419 159
Equus_caballus_69_2   (Horse)   544 198
Myotis_lucifugus_69_2.0   (Little brown bat)   492 186
Pteropus_vampyrus_69_1   (Large flying fox)   515 187
Sorex_araneus_69_1   (European shrew)   307 123
Erinaceus_europaeus_69   (Western European hedgehog)   421 154
Procavia_capensis_69_1   (Cape rock hyrax)   477 172
Loxodonta_africana_69_3   (African savanna elephant)   545 204
Echinops_telfairi_69   (Small Madagascar hedgehog)   439 163
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   361 136
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   331 113
Macropus_eugenii_69_1.0   (Tammar wallaby)   461 167
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   425 187
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   557 200
Ornithorhynchus_anatinus_69_5   (Platypus)   488 204
Petromyzon_marinus_69_7.0   (Sea lamprey)   273 82
Meleagris_gallopavo_69_2   (Turkey)   446 181
Gallus_gallus_69_2   (Chicken)   446 177
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   418 178
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   519 188
Anolis_carolinensis_69_2.0   (Green anole)   449 189
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   447 165
Latimeria_chalumnae_69_1   (Coelacanth)   511 195
Gadus_morhua_69_1   (Atlantic cod)   615 244
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   650 263
Takifugu_rubripes_69_4   (Torafugu)   733 246
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   669 260
Oryzias_latipes_69_1   (Japanese medaka)   561 224
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   764 277
Oreochromis_niloticus_69_1.0   (Nile tilapia)   702 271
Danio_rerio_69_9   (Zebrafish)   824 292
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   208 53
Ciona_intestinalis_69   (Vase tunicate)   204 76
Drosophila_melanogaster_69_5   (Fruit fly)   146 62
Caenorhabditis_elegans_69_215   (Roundworm)   131 43
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   2 2
Arabidopsis_thaliana_10   (Thale cress)   4 4

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   2667 831
Homo_sapiens__(NCBI_version)   (Human)   1196 372
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   503 206
Heliconius_numata__(Incomplete) 4 4
Loa_loa_v3.3_(Request)   (Eye worm)   137 48
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   121 80
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   101 42
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Lotus_japonicus__(Early_assembly) 2 2
Malus_x_domestica_(Duplicate)   (Apple)   7 7
Ricinus_communis__(Early_assembly)   (Castor bean)   3 3
Nicotiana_benthamiana_0.4.4_(Early_draft) 6 6
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   2 2
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   2 2
Phoenix_dactylifera__(Early_draft)   (Date palm)   5 5
NCBI_plasmid_sequences_(Plasmids) 155 118
NCBI_viral_sequences_(Viral) 234 210
STRING_v9.0.5_(STRING) 20015 8548
Uniprot_2018_03_genome 265201 129837
NCBI_2017_08_genome 548745 238735
Protozoadb_2010_08_(Protozoadb) 144 17
UniProt__viral_sequences_(Viral) 201 149
Protein_Data_Bank_(all_PDB_sequenc) 1132 772
TargetDB__(Targets) 1154 562
PDB_chains_(SCOP_1.75)_(PDB) 172 117
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2532 2526

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