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Domain combinations for Superoxide reductase-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Superoxide reductase-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Proterospongia_sp._ATCC_50818_ 1 1
Monosiga_brevicollis_ 1 1
Bigelowiella_natans_CCMP2755_22 1 1
Giardia_lamblia_2.3 1 1
Phaeodactylum_tricornutumCCAP_1055/1 1 1
Thalassiosira_pseudonana_CCMP1335 2 1
Symbiodinium_minutum_clade_B1_v1.2 2 1
Guillardia_theta_CCMP2712_v1.0_ 1 1
Cryptobacterium_curtum_DSM_15641 1 1
Eggerthella_sp._YY7918 1 1
Eggerthella_lenta_DSM_2243 2 2
Slackia_heliotrinireducens_DSM_20476 2 2
Atopobium_parvulum_DSM_20469 1 1
Coriobacterium_glomerans_PW2 1 1
Anaerococcus_prevotii_DSM_20548 1 1
Finegoldia_magna_ATCC_29328 1 1
Veillonella_parvula_DSM_2008 1 1
Megasphaera_elsdenii_DSM_20460 2 2
Acidaminococcus_intestini_RyC-MR95 1 1
Acidaminococcus_fermentans_DSM_20731 1 1
Megamonas_hypermegale 1 1
Selenomonas_sputigena_ATCC_35185 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 2 2
Clostridium_clariflavum_DSM_19732 1 1
Clostridium_cellulolyticum_H10 1 1
Ethanoligenens_harbinense_YUAN-3 1 1
Faecalibacterium_prausnitzii 2 2
Ruminococcus_sp. 1 1
Ruminococcus_albus_7 1 1
Oscillibacter_valericigenes_Sjm18-20 2 2
butyrate-producing_bacterium_SS3/4 2 2
butyrate-producing_bacterium_SM4/1 1 1
Thermincola_potens_JR 1 1
Desulfosporosinus_acidiphilus_SJ4 2 2
Desulfosporosinus_orientis_DSM_765 2 2
Dehalobacter_sp._DCA 1 1
Dehalobacter_sp._CF 1 1
Syntrophobotulus_glycolicus_DSM_8271 1 1
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 1 1
Desulfotomaculum_acetoxidans_DSM_771 2 2
Acetobacterium_woodii_DSM_1030 2 2
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 1 1
Clostridium_sticklandii_DSM_519 2 2
Filifactor_alocis_ATCC_35896 1 1
Clostridium_saccharolyticum_WM1 3 3
Clostridium_phytofermentans_ISDg 3 3
Clostridium_lentocellum_DSM_5427 2 2
[Ruminococcus]_obeum 1 1
Eubacterium_rectale_M104/1 1 1
Eubacterium_rectale_ATCC_33656 1 1
Butyrivibrio_proteoclasticus_B316 1 1
Butyrivibrio_fibrisolvens 1 1
Syntrophothermus_lipocalidus_DSM_12680 1 1
Alkaliphilus_oremlandii_OhILAs 1 1
Alkaliphilus_metalliredigens_QYMF 2 2
Clostridium_sp._BNL1100 2 2
Clostridium_kluyveri_DSM_555 1 1
Clostridium_beijerinckii_NCIMB_8052 1 1
Clostridium_tetani_E88 1 1
Clostridium_cellulovorans_743B 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Mahella_australiensis_50-1_BON 1 1
Thermosediminibacter_oceani_DSM_16646 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kronotskyensis_2002 1 1
Caldicellulosiruptor_hydrothermalis_108 1 1
Caldicellulosiruptor_owensensis_OL 1 1
Caldicellulosiruptor_lactoaceticus_6A 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 1 1
Caldicellulosiruptor_bescii_DSM_6725 1 1
Thermoanaerobacterium_xylanolyticum_LX-11 1 1
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Thermodesulfobium_narugense_DSM_14796 1 1
Coprothermobacter_proteolyticus_DSM_5265 1 1
Thermoanaerobacter_tengcongensis_MB4 1 1
Moorella_thermoacetica_ATCC_39073 1 1
Ammonifex_degensii_KC4 1 1
Thermoanaerobacter_mathranii_subsp._mathranii_str._A3 1 1
Thermoanaerobacter_pseudethanolicus_ATCC_33223 2 2
Thermoanaerobacter_sp._X514 2 2
Thermoanaerobacter_italicus_Ab9 1 1
Thermoanaerobacter_wiegelii_Rt8.B1 2 2
Thermoanaerobacter_brockii_subsp._finnii_Ako-1 2 2
Acetohalobium_arabaticum_DSM_5501 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 1 1
Solibacillus_silvestris_StLB046 1 1
Candidatus_Cloacamonas_acidaminovorans 1 1
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 1 1
Thermovirga_lienii_DSM_17291 1 1
Aminobacterium_colombiense_DSM_12261 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Anaerobaculum_mobile_DSM_13181 1 1
Turneriella_parva_DSM_21527 2 2
Spirochaeta_smaragdinae_DSM_11293 1 1
Sphaerochaeta_pleomorpha_str._Grapes 2 2
Sphaerochaeta_globus_str._Buddy 2 2
Spirochaeta_caldaria_DSM_7334 1 1
Treponema_brennaborense_DSM_12168 2 2
Treponema_paraluiscuniculi_Cuniculi_A 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_thermophila_DSM_6192 1 1
Thermodesulfatator_indicus_DSM_15286 1 1
Thermodesulfobacterium_sp._OPB45 1 1
Desulfurispirillum_indicum_S5 1 1
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Denitrovibrio_acetiphilus_DSM_12809 1 1
Deferribacter_desulfuricans_SSM1 1 1
Flexistipes_sinusarabici_DSM_4947 1 1
Marinitoga_piezophila_KA3 1 1
Petrotoga_mobilis_SJ95 1 1
Mesotoga_prima_MesG1.Ag.4.2 1 1
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 1 1
Fervidobacterium_nodosum_Rt17-B1 1 1
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 1 1
Thermotoga_lettingae_TMO 1 1
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 1 1
Thermotoga_naphthophila_RKU-10 1 1
Thermotoga_petrophila_RKU-1 1 1
Thermotoga_neapolitana_DSM_4359 1 1
Thermotoga_maritima_MSB8 1 1
Thermovibrio_ammonificans_HB-1 1 1
Desulfurobacterium_thermolithotrophum_DSM_11699 2 2
Sulfurihydrogenibium_sp._YO3AOP1 1 1
Sulfurihydrogenibium_azorense_Az-Fu1 1 1
Persephonella_marina_EX-H1 1 1
Elusimicrobium_minutum_Pei191 1 1
uncultured_Termite_group_1_bacterium_phylotype_Rs-D17 1 1
Dictyoglomus_turgidum_DSM_6724 1 1
Dictyoglomus_thermophilum_H-6-12 1 1
Caldisericum_exile_AZM16c01 2 2
Ilyobacter_polytropus_DSM_2926 1 1
Candidatus_Methylomirabilis_oxyfera 1 1
Acidithiobacillus_caldus_SM-1 1 1
Nautilia_profundicola_AmH 2 2
Nitratifractor_salsuginis_DSM_16511 1 1
Sulfurospirillum_deleyianum_DSM_6946 1 1
Sulfurospirillum_barnesii_SES-3 2 2
Arcobacter_sp._L 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1 1
Sulfuricurvum_kujiense_DSM_16994 1 1
Sulfurimonas_autotrophica_DSM_16294 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Sulfurovum_sp._NBC37-1 2 2
Desulfarculus_baarsii_DSM_2075 1 1
Desulfobacca_acetoxidans_DSM_11109 1 1
Desulfomonile_tiedjei_DSM_6799 2 2
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfurivibrio_alkaliphilus_AHT2 1 1
Desulfotalea_psychrophila_LSv54 1 1
Desulfobulbus_propionicus_DSM_2032 1 1
Desulfatibacillum_alkenivorans_AK-01 1 1
Desulfobacterium_autotrophicum_HRM2 1 1
Desulfococcus_oleovorans_Hxd3 1 1
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfomicrobium_baculatum_DSM_4028 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 2 2
Lawsonia_intracellularis_PHE/MN1-00 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_alaskensis_G20 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_salexigens_DSM_2638 2 2
Desulfovibrio_desulfuricans_subsp._desulfuricans_str._ATCC_27774 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Hippea_maritima_DSM_10411 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_sp._M21 1 1
Geobacter_uraniireducens_Rf4 2 2
Geobacter_lovleyi_SZ 1 1
Geobacter_bemidjiensis_Bem 1 1
Geobacter_sulfurreducens_KN400 1 1
Geobacter_metallireducens_GS-15 1 1
Pelobacter_propionicus_DSM_2379 1 1
Pelobacter_carbinolicus_DSM_2380 1 1
Anaeromyxobacter_sp._Fw109-5 1 1
Magnetococcus_marinus_MC-1 4 4
Bradyrhizobium_sp._ORS_278 1 1
Ferrimonas_balearica_DSM_9799 1 1
Halothiobacillus_neapolitanus_c2 1 1
Serratia_sp._ATCC_39006 1 1
Dickeya_dadantii_Ech703 1 1
Nanoarchaeum_equitans_Kin4-M 1 1
Candidatus_Korarchaeum_cryptofilum_OPF8 2 2
Fervidicoccus_fontis_Kam940 1 1
Pyrolobus_fumarii_1A 1 1
Hyperthermus_butylicus_DSM_5456 1 1
Thermogladius_cellulolyticus_1633 1 1
Ignicoccus_hospitalis_KIN4/I 1 1
Thermosphaera_aggregans_DSM_11486 1 1
Staphylothermus_hellenicus_DSM_12710 1 1
Staphylothermus_marinus_F1 1 1
Desulfurococcus_fermentans_DSM_16532 1 1
Desulfurococcus_kamchatkensis_1221n 1 1
Desulfurococcus_mucosus_DSM_2162 1 1
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 1 1
Methanocella_arvoryzae_MRE50 3 3
Methanocella_conradii_HZ254 2 2
Methanocella_paludicola_SANAE 1 1
Methanosalsum_zhilinae_DSM_4017 1 1
Methanohalobium_evestigatum_Z-7303 3 2
Methanococcoides_burtonii_DSM_6242 2 2
Methanosarcina_acetivorans_C2A 1 1
Methanosarcina_mazei_Go1 1 1
Methanohalophilus_mahii_DSM_5219 3 3
Methanosphaerula_palustris_E1-9c 1 1
Methanoregula_boonei_6A8 1 1
Methanospirillum_hungatei_JF-1 1 1
Methanocorpusculum_labreanum_Z 1 1
Methanoplanus_petrolearius_DSM_11571 1 1
Ferroglobus_placidus_DSM_10642 2 2
Archaeoglobus_profundus_DSM_5631 1 1
Archaeoglobus_fulgidus_DSM_4304 2 2
Thermococcus_sp._4557 1 1
Thermococcus_onnurineus_NA1 1 1
Thermococcus_kodakarensis_KOD1 1 1
Thermococcus_gammatolerans_EJ3 1 1
Thermococcus_sibiricus_MM_739 1 1
Thermococcus_barophilus_MP 1 1
Pyrococcus_sp._ST04 1 1
Pyrococcus_yayanosii_CH1 1 1
Pyrococcus_horikoshii_OT3 1 1
Pyrococcus_abyssi_GE5 1 1
Pyrococcus_furiosus_COM1 1 1
Thermoplasmatales_archaeon_BRNA1 1 1
Methanotorris_igneus_Kol_5 1 1
Methanocaldococcus_sp._FS406-22 1 1
Methanocaldococcus_vulcanius_M7 1 1
methanocaldococcus_infernus_ME 1 1
Methanocaldococcus_jannaschii_DSM_2661 1 1
Methanothermococcus_okinawensis_IH1 1 1
Methanococcus_aeolicus_Nankai-3 1 1
Methanococcus_maripaludis_C5 1 1
Methanococcus_voltae_A3 1 1
Methanococcus_vannielii_SB 1 1
Methanothermus_fervidus_DSM_2088 2 2
Methanothermobacter_marburgensis_str._Marburg 1 1
Methanothermobacter_thermautotrophicus_str._Delta_H 1 1
Methanosphaera_stadtmanae_DSM_3091 1 1
Methanobrevibacter_sp._AbM4 1 1
Methanobrevibacter_ruminantium_M1 1 1
Methanobrevibacter_smithii_ATCC_35061 1 1
Complete_genome_sequence_of_Methanobacterium_sp._Mb1 1 1
Aciduliprofundum_sp._MAR08-339 1 1
Aciduliprofundum_boonei_T469 1 1

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Strains
Genome     Number   Proteins
Gordonibacter_pamelaeae_7-10-1-b 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
[Eubacterium]_cylindroides_[Eubacterium]_cylindroides_T2-87 1 1
Faecalibacterium_prausnitzii_L2-6 3 3
Ruminococcus_champanellensis_18P13 1 1
Clostridium_acidurici_9a 1 1
Desulfosporosinus_meridiei_DSM_13257 1 1
Desulfitobacterium_hafniense_DCB-2 1 1
Desulfotomaculum_gibsoniae_DSM_7213 1 1
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Clostridium_sp._SY8519 1 1
Clostridium_saccharobutylicum_DSM_13864 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 1 1
Clostridium_kluyveri_NBRC_12016 1 1
Clostridium_tetani_genome_12124569 1 1
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_Ba4_str._657 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Thermacetogenium_phaeum_DSM_12270 2 2
Thermoanaerobacter_sp._X513 2 2
Halobacteroides_halobius_DSM_5150 1 1
Prevotella_dentalis_DSM_3688 1 1
Treponema_pedis_str._T_A4 1 1
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Spirochaeta_thermophila_DSM_6578 1 1
Thermotoga_maritima_MSB8 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 1 1
Lawsonia_intracellularis_N343 1 1
Desulfovibrio_hydrothermalis_AM13_=_DSM_14728 4 4
Desulfovibrio_vulgaris_RCH1 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Desulfovibrio_vulgaris_str._Hildenborough 1 1
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 1 1
Desulfovibrio_desulfuricans_ND132 2 2
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Bradyrhizobium_sp._BTAi1 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Methanomethylovorans_hollandica_DSM_15978 2 2
Methanolobus_psychrophilus_R15 2 2
Methanosarcina_mazei_Tuc01 1 1
Methanoregula_formicica_Methanoregula_formicicum_SMSP 1 1
Archaeoglobus_sulfaticallidus_PM70-1 1 1
Thermococcus_sp._AM4 1 1
Thermococcus_sp._CL1 1 1
Thermococcus_litoralis_DSM_5473 1 1
Pyrococcus_sp._NA2 1 1
Pyrococcus_furiosus_DSM_3638 1 1
Candidatus_Methanomethylophilus_alvus_Mx1201 1 1
Candidatus_Methanomassiliicoccus_intestinalis_Issoire-Mx1 1 1
Methanococcus_maripaludis_X1 1 1
Methanococcus_maripaludis_C6 1 1
Methanococcus_maripaludis_C7 1 1
Methanococcus_maripaludis_S2 1 1
Methanobacterium_sp._SWAN-1 1 1

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Others
Genome     Number   Proteins
NCBI_plasmid_sequences_(Plasmids) 2 2
Uniprot_2018_03_genome 3412 3408
NCBI_2017_08_genome 4266 4263
PDB_chains_(SCOP_1.75)_(PDB) 5 5
NCBI_viral_sequences_(Viral) 1 1
TargetDB__(Targets) 3 3
Protein_Data_Bank_(all_PDB_sequenc) 98 98
STRING_v9.0.5_(STRING) 157 156
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 235 235

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