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Domain combinations for C2 domain (Calcium/lipid-binding domain, CaLB) superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a C2 domain (Calcium/lipid-binding domain, CaLB) domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   988 626
Pan_troglodytes_76_2.1.4   (Chimpanzee)   228 144
Gorilla_gorilla_76_3.1   (Western gorilla)   373 214
Pongo_abelii_76_2   (Sumatran orangutan)   252 161
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   257 157
Papio_anubis_76   (Olive baboon)   260 168
Macaca_mulatta_76_1   (Rhesus monkey)   450 275
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   560 356
Otolemur_garnettii_76_3   (Small-eared galago)   248 153
Microcebus_murinus_76_1   (Gray mouse lemur)   188 123
Rattus_norvegicus_76_5.0   (Norway rat)   305 188
Mus_musculus_76_38   (House mouse)   607 383
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   200 126
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   253 163
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   248 146
Cavia_porcellus_76_3   (Domestic guinea pig)   246 152
Oryctolagus_cuniculus_76_2   (Rabbit)   239 147
Ochotona_princeps_76   (American pika)   194 126
Tupaia_belangeri_76   (Northern tree shrew)   162 105
Sus_scrofa_76_10.2   (Pig)   259 169
Bos_taurus_76_3.1   (Cattle)   259 160
Ovis_aries_76_3.1   (Sheep)   288 176
Vicugna_pacos_76_1   (Alpaca)   118 77
Tursiops_truncatus_76_1   (Bottlenose dolphin)   235 144
Mustela_putorius_furo_76_1.0   (Domestic ferret)   255 150
Ailuropoda_melanoleuca_76_1   (Giant panda)   280 172
Canis_familiaris_76_3.1   (Dog)   377 208
Felis_catus_76_6.2   (Domestic cat)   261 156
Equus_caballus_76_2   (Horse)   320 184
Myotis_lucifugus_76_2.0   (Little brown bat)   236 148
Pteropus_vampyrus_76_1   (Large flying fox)   231 142
Sorex_araneus_76_1   (European shrew)   133 82
Erinaceus_europaeus_76   (Western European hedgehog)   153 110
Procavia_capensis_76_1   (Cape rock hyrax)   205 134
Loxodonta_africana_76_3   (African savanna elephant)   333 204
Echinops_telfairi_76   (Small Madagascar hedgehog)   168 112
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   285 191
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   114 77
Macropus_eugenii_76_1.0   (Tammar wallaby)   193 124
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   256 169
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   235 147
Ornithorhynchus_anatinus_76_5   (Platypus)   231 170
Saccoglossus_kowalevskii_v3.0 221 155
Petromyzon_marinus_76_7.0   (Sea lamprey)   118 87
Meleagris_gallopavo_76_2   (Turkey)   235 153
Gallus_gallus_76_4   (Chicken)   230 143
Anas_platyrhynchos_76_1.0   (Mallard)   223 142
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   216 147
Ficedula_albicollis_76_1.0   (Collared flycatcher)   220 140
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   284 185
Anolis_carolinensis_76_2.0   (Green anole)   248 158
Xenopus_laevis_   (African clawed frog)   172 136
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   325 196
Latimeria_chalumnae_76_1   (Coelacanth)   305 191
Lepisosteus_oculatus_76   (Spotted gar)   385 226
Gadus_morhua_76_1   (Atlantic cod)   301 184
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   485 279
Takifugu_rubripes_76_4   (Torafugu)   1288 726
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   397 238
Oryzias_latipes_76_1   (Japanese medaka)   371 235
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   336 208
Poecilia_formosa_76   (Amazon molly)   357 211
Oreochromis_niloticus_76_1.0   (Nile tilapia)   481 299
Astyanax_mexicanus_76   (Mexican tetra)   320 208
Danio_rerio_76_9   (Zebrafish)   545 348
Oikopleura_dioica 66 47
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   359 169
Ciona_intestinalis_76   (Vase tunicate)   136 79
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   162 108
Adineta_vaga 304 211
Octopus_bimaculoides_280 175 119
Crassostrea_gigas_22   (Pacific oyster)   134 90
Lottia_gigantea_   (Owl limpet)   131 88
Helobdella_robusta_ 133 98
Capitella_sp._I_ 129 90
Danaus_plexippus_OGS1.0   (Monarch butterfly)   79 56
Heliconius_melpomene_   (Postman butterfly)   62 47
Bombyx_mori_   (Domestic silkworm)   70 55
Nasonia_vitripennis_   (Jewel wasp)   58 38
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   203 132
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   88 59
Linepithema_humile_v1.1   (Argentine ant)   86 59
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   83 56
Solenopsis_invicta_v.2.2.3   (Red fire ant)   76 54
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   87 55
Atta_cephalotes_v1.1 92 64
Camponotus_floridanus_v3.3   (Florida carpenter ant)   87 57
Lucilia_cuprina   (Australian sheep blowfly)   64 41
Drosophila_grimshawi_1.3 71 51
Drosophila_willistoni_1.3 70 49
Drosophila_pseudoobscura_2.13 68 47
Drosophila_persimilis_1.3 62 44
Drosophila_suzukii 79 50
Drosophila_yakuba_1.3 70 50
Drosophila_simulans_1.3 67 49
Drosophila_sechellia_1.3 68 48
Drosophila_melanogaster_76_5   (Fruit fly)   285 197
Drosophila_erecta_1.3 69 48
Drosophila_ananassae_1.3 68 47
Drosophila_virilis_1.2 72 52
Drosophila_mojavensis_1.3 70 49
Megaselia_scalaris_22 31 23
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   66 47
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   75 53
Anopheles_darlingi_22   (American malaria mosquito)   43 35
Anopheles_gambiae_49_3j   (African malaria mosquito)   74 54
Tribolium_castaneum_3.0   (Red flour beetle)   87 54
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   89 57
Acyrthosiphon_pisum_   (Pea aphid)   66 43
Rhodnius_prolixus_22 71 49
Daphnia_pulex_   (Common water flea)   98 76
Strigamia_maritima_22 110 69
Sarcoptes_scabiei 51 40
Tetranychus_urticae_   (Two-spotted spider mite)   69 51
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   76 54
Pristionchus_pacificus_ 68 54
Meloidogyne_incognita_   (Southern root-knot nematode)   49 39
Meloidogyne_hapla_ 48 35
Onchocerca_volvulus_22 70 52
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   68 50
Caenorhabditis_japonica_ 67 49
Caenorhabditis_brenneri_ 95 72
Caenorhabditis_remanei_ 85 61
Caenorhabditis_elegans_76_235   (Roundworm)   160 113
Caenorhabditis_briggsae_2 75 52
Trichinella_spiralis_22 51 43
Hymenolepis_microstoma_ 81 50
Echinococcus_multilocularis_ 68 42
Echinococcus_granulosus_ 76 44
Taenia_solium_   (Pork tapeworm)   66 42
Schistosoma_mansoni_ 83 55
Mnemiopsis_leidyi   (Sea walnut)   120 80
Thelohanellus_kitauei 15 11
Acropora_digitifera_v1.0 125 91
Nematostella_vectensis_1.0   (Starlet sea anemone)   186 123
Hydra_vulgaris 148 93
Amphimedon_queenslandica 103 68
Trichoplax_adhaerens_ 98 58
Proterospongia_sp._ATCC_50818_ 82 60
Monosiga_brevicollis_ 56 43
Sphaeroforma_arctica_JP610_ 56 48
Capsaspora_owczarzaki_ATCC_30864_ 83 62
Conidiobolus_coronatus_NRRL28638_v1.0 46 38
Mortierella_verticillata_NRRL_6337_ 58 39
Phycomyces_blakesleeanus_ 46 31
Rhizopus_oryzae_RA_99-880_ 52 33
Mucor_circinelloides_ 48 31
Rhizomucor_miehei_CAU432_ 41 26
Malassezia_globosa_CBS_7966_ 28 20
Sporisorium_reilianum_22 19 12
Ustilago_maydis_ 17 10
Mixia_osmundae_IAM_14324_v1.0 22 14
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 20 13
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 17 11
Melampsora_laricis-populina_ 20 14
Rhodotorula_graminis_WP1_v1.0 16 11
Sporobolomyces_roseus_IAM_13481_ 13 9
Microbotryum_violaceum_22 23 17
Wallemia_sebi_v1.0 18 11
Sphaerobolus_stellatus_v1.0 39 32
Piloderma_croceum_F_1598_v1.0 56 51
Serpula_lacrymans_var._lacrymans_S7.9_ 23 18
Coniophora_puteana 18 14
Hydnomerulius_pinastri_v2.0 20 15
Paxillus_rubicundulus_Ve08.2h10_v1.0 21 16
Pisolithus_microcarpus_441_v1.0 18 14
Pisolithus_tinctorius_Marx_270_v1.0 22 18
Scleroderma_citrinum_Foug_A_v1.0 20 16
Coprinopsis_cinerea_okayama7_130_v3 26 18
Pleurotus_ostreatus_   (Oyster mushroom)   23 19
Amanita_thiersii_Skay4041_v1.0 25 20
Amanita_muscaria_Koide_v1.0   (Fly agaric)   27 19
Galerina_marginata_v1.0 33 27
Hebeloma_cylindrosporum_h7_v2.0 25 20
Laccaria_bicolor_S238N-H82_ 22 16
Agaricus_bisporus_var._bisporus_ 20 16
Schizophyllum_commune_ 24 18
Stereum_hirsutum_FP-91666_SS1__v1.0 26 19
Heterobasidion_annosum_ 24 19
Gloeophyllum_trabeumv1.0 23 16
Punctularia_strigosozonata_v1.0 26 20
Sebacina_vermifera_MAFF_305830_v1.0 38 32
Fomitiporia_mediterranea_v1.0 39 33
Tulasnella_calospora_AL13/4D_v1.0 18 13
Postia_placenta_ 33 22
Wolfiporia_cocos_MD-104_SS10__v1.0 20 14
Fomitopsis_pinicolav1.0 19 14
Fomitopsis_pinicola_FP-58527_SS1_v3.0 20 14
Phanerochaete_chrysosporium_RP-78_2.1 24 17
Dichomitus_squalens 19 14
Trametes_versicolor_v1.0 22 15
Tremella_mesenterica_   (Witches' butter)   20 13
Daldinia_eschscholzii_EC12_v1.0 23 16
Apiospora_montagnei_NRRL_25634_v1.0 30 21
Magnaporthe_poae_ATCC_64411_22 20 14
Magnaporthe_grisea_70-15_ 25 17
Podospora_anserina_ 24 16
Sporotrichum_thermophile_ATCC_42464_ 19 12
Thielavia_terrestris_NRRL_8126_ 17 11
Chaetomium_globosum_CBS_148.51_ 20 13
Neurospora_tetrasperma_ 22 15
Neurospora_discreta_FGSC_8579_ 20 13
Neurospora_crassa_OR74A_ 23 16
Cryphonectria_parasitica_   (Chestnut blight fungus)   21 14
Verticillium_albo-atrum_VaMs.102_ 13 8
Verticillium_dahliae_VdLs.17_ 21 15
Acremonium_alcalophilumv_1.0 19 13
Glomerella_graminicola_22 23 16
Fusarium_graminearum_ 27 19
Nectria_haematococca_mpVI_ 27 20
Fusarium_oxysporum_f._sp._lycopersici_4286_ 31 24
Fusarium_verticillioides_7600_ 26 19
Trichoderma_asperellum_CBS_433.97_v1.0 22 15
Trichoderma_atroviride_ 22 15
Trichoderma_citrinoviride_v1.0 20 14
Trichoderma_reesei_1.2 21 14
Trichoderma_virens_Gv29-8_ 23 16
Trichoderma_longibrachiatum_ATCC_18648_v1.0 23 16
Trichoderma_harzianum_CBS_226.95_v1.0 22 15
Amorphotheca_resinae_v1.0   (Creosote fungus)   19 13
Botrytis_cinerea_B05.10_ 20 13
Sclerotinia_sclerotiorum_ 17 11
Blumeria_graminis_22 17 12
Didymella_exigua_CBS_183.55_v1.0 23 15
Leptosphaeria_maculans_22 23 15
Setosphaeria_turcica_v1.0 22 14
Cochliobolus_miyabeanus_ATCC_44560_v1.0 23 15
Cochliobolus_victoriae_FI3_v1.0 24 16
Cochliobolus_carbonum_26-R-13_v1.0 23 15
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   22 14
Alternaria_brassicicola_ 21 13
Cochliobolus_lunatus_m118_v2.0 23 16
Pyrenophora_teres_f._teres_22 24 16
Pyrenophora_tritici-repentis_ 23 15
Stagonospora_nodorum_ 22 15
Mycosphaerella_graminicola_IPO323_ 21 15
Zasmidium_cellare_ATCC_36951_v1.0 23 16
Dothistroma_septosporum 21 15
Septoria_musiva_v1.0 21 15
Mycosphaerella_fijiensis_CIRAD86_ 19 13
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 20 14
Paracoccidioides_brasiliensis_Pb18_ 18 13
Coccidioides_posadasii_RMSCC_3488_ 20 14
Coccidioides_immitis_RS_ 23 17
Ajellomyces_dermatitidis_SLH14081_ 19 13
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 19 13
Microsporum_canis_CBS_113480_ 17 12
Trichophyton_equinum_CBS_127.97_ 19 13
Trichophyton_verrucosum_HKI_0517_ 16 11
Arthroderma_benhamiae_CBS_112371_ 15 11
Trichophyton_tonsurans_CBS_112818_ 16 10
Trichophyton_rubrum_CBS_118892_ 17 12
Uncinocarpus_reesii_1704_ 17 12
Aspergillus_zonatus_v1.0 18 13
Penicillium_chrysogenum_Wisconsin_54-1255_ 19 13
Penicillium_chrysogenum_v1.0 19 13
Aspergillus_acidus_v1.0 19 13
Aspergillus_fumigatus_Af293 19 13
Aspergillus_brasiliensis_v1.0 19 13
Aspergillus_nidulans_FGSC_A4_ 17 12
Aspergillus_sydowii_v1.0 19 13
Aspergillus_versicolor_v1.0 19 13
Aspergillus_glaucus 19 13
Aspergillus_carbonarius_ITEM_5010_ 19 13
Neosartorya_fischeri_NRRL_181_ 19 13
Aspergillus_terreus_NIH2624_ 19 14
Aspergillus_tubingensis_v1.0 19 13
Aspergillus_wentii_v1.0 18 12
Aspergillus_oryzae_RIB40_ 18 12
Aspergillus_niger_22 17 12
Aspergillus_niger_ATCC_1015_ 14 8
Aspergillus_flavus_NRRL3357_ 19 13
Aspergillus_clavatus_NRRL_1_ 19 13
Penicillium_marneffei_ATCC_18224_ 19 13
Tuber_melanosporum_Mel28_22 18 12
Tuber_melanosporum_Vittad_   (Perigord truffle)   18 12
Hansenula_polymorpha_v2.0 19 11
Dekkera_bruxellensis_CBS_2499_v2.0 15 9
Pichia_membranifaciensv1.0 15 9
Candida_tanzawaensis_NRRL_Y-17324__v1.0 19 11
Candida_dubliniensis_CD36_ 19 11
Candida_tropicalis_MYA-3404_ 18 11
Candida_parapsilosis_ 19 11
Candida_albicans_SC5314 18 11
Lodderomyces_elongisporus_NRRL_YB-4239_ 16 10
Babjeviella_inositovora_NRRL_Y-12698_v1.0 19 11
Pichia_stipitis_CBS_6054_ 19 11
Candida_guilliermondii_ATCC_6260_ 18 11
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 19 11
Debaromyces_hansenii 18 11
Wickerhamomyces_anomalus 19 12
Pichia_pastoris_GS115_ 18 10
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 10 5
Yarrowia_lipolytica_CLIB122 13 9
Candida_lusitaniae_ATCC_42720_ 19 11
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 19 11
Vanderwaltozyma_polyspora_DSM_70294_ 15 11
Candida_glabrata_CBS138 16 11
Kluyveromyces_thermotolerans_CBS_6340 19 11
Lachancea_kluyveri_ 19 11
Kluyveromyces_waltii 19 11
Ashbya_gossypii_ATCC_10895_ 19 11
Zygosaccharomyces_rouxii_ 17 11
Saccharomyces_mikatae_MIT 21 13
Saccharomyces_paradoxus_MIT 23 12
Saccharomyces_cerevisiae_76   (Baker's yeast)   23 12
Saccharomyces_bayanus_MIT 22 13
Kluyveromyces_lactis 18 10
Schizosaccharomyces_cryophilus_OY26_22 22 16
Schizosaccharomyces_octosporus_yFS286_ 22 16
Schizosaccharomyces_japonicus_yFS275_ 21 15
Schizosaccharomyces_pombe   (Fission yeast)   22 16
Catenaria_anguillulae_PL171_v1.0 44 37
Allomyces_macrogynus_ATCC_38327_ 87 80
Spizellomyces_punctatus_DAOM_BR117_ 42 30
Dictyostelium_discoideum 65 58
Dictyostelium_purpureum_ 64 54
Entamoeba_dispar_1.2 43 39
Entamoeba_invadens_1.2 62 59
Entamoeba_histolytica_1 45 42
Selaginella_moellendorffii_ 145 111
Pinus_taeda   (Loblolly pine)   139 111
Picea_abies   (Norway spruce)   90 75
Eucalyptus_grandis_v201   (Rose gum)   225 169
Theobroma_cacao_B97-61/B2_v1   (Cacao)   133 87
Gossypium_raimondii_v221 444 305
Citrus_clementina_v165 186 133
Citrus_sinensis_v154   (Sweet orange)   237 167
Thellungiella_halophila_v173 177 119
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   246 175
Capsella_rubella_v183 185 120
Arabidopsis_lyrata_   (Lyrate rockcress)   165 111
Arabidopsis_thaliana_10   (Thale cress)   203 142
Carica_papaya_   (Papaya)   104 68
Medicago_truncatula_   (Barrel medic)   227 165
Phaseolus_vulgaris_v186   (French bean)   201 140
Glycine_max_v109   (Soybean)   320 221
Cucumis_sativus_v122   (Cucumber)   168 115
Fragaria_vesca_   (Wild strawberry)   156 101
Malus_domestica_v196   (Apple)   260 175
Prunus_persica_v139   (Peach)   157 103
Linum_usitatissimum_v200   (Flax)   220 162
Manihot_esculenta_v147   (Cassava)   191 131
Populus_trichocarpa_v156   (Black cottonwood)   242 152
Vitis_vinifera_   (Wine grape)   138 91
Mimulus_guttatus_v140   (Spotted monkey flower)   188 137
Solanum_lycopersicum_v.2.3   (Tomato)   168 117
Solanum_tuberosum_   (Potato)   218 142
Actinidia_chinensis_Hongyang_ 220 155
Aquilegia_coerulea_v195 183 127
Triticum_urartu_22 128 85
Triticum_aestivum_22   (Bread wheat)   338 261
Aegilops_tauschii_22 122 87
Brachypodium_distachyon_   (Stiff brome)   177 119
Oryza_barthii_22   (African wild rice)   179 124
Oryza_meridionalis_22 179 115
Oryza_glumaepatula_22 228 146
Oryza_glaberrima   (African rice)   118 83
Oryza_punctata_22 214 151
Oryza_nivara_22 214 145
Oryza_brachyantha_22   (Malo sina)   138 92
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   198 133
Oryza_sativa_v193   (Rice)   198 133
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   159 108
Panicum_virgatum_v202   (Switchgrass)   258 182
Setaria_italica_v164   (Foxtail millet)   170 120
Zea_mays_subsp._mays_   (Maize)   251 184
Zea_mays_v181   (Maize)   261 184
Sorghum_bicolor_   (Sorghum)   130 89
Musa_balbisiana   (Balbis banana)   192 130
Musa_acuminata_22   (Wild Malaysian banana)   177 123
Amborella_trichopoda_22 92 66
Physcomitrella_patens 112 87
Coccomyxa_subellipsoidea_sp._C-169_v2 20 14
Asterochloris_sp._Cgr/DA1pho_v1.0 20 16
Chlorella_variabilis_sp._NC64A_ 23 18
Chlorella_vulgaris_ 19 14
Volvox_carteri_f._nagariensis_ 29 25
Volvox_carteri_v199 29 25
Chlamydomonas_reinhardtii_4.0 33 30
Ostreococcus_sp._RCC809_ 19 12
Ostreococcus_lucimarinus_CCE9901_ 22 12
Ostreococcus_tauri_ 18 10
Bathycoccus_prasinos_ 18 9
Micromonas_sp._RCC299_ 28 19
Micromonas_pusilla_CCMP1545_v3.0 23 18
Cyanidioschyzon_merolae_strain_10D_22 4 2
Cyanidioschyzon_merolae 4 2
Porphyridium_purpureum_02_2012 39 28
Thecamonas_trahens_ATCC_50062_ 147 88
Bigelowiella_natans_CCMP2755_22 100 80
Giardia_lamblia_2.3 2 2
Cyanophora_paradoxa_ 118 97
Leishmania_mexicana_2.4 29 22
Leishmania_major_strain_Friedlin_ 28 20
Leishmania_infantum_JPCM5_2.4 30 22
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 24 19
Trypanosoma_vivax_ 20 15
Trypanosoma_cruzi_strain_CL_Brener 28 20
Trypanosoma_congolense_2.4 28 20
Trypanosoma_brucei_gambiense_v4.1 27 18
Trypanosoma_brucei_TREU927_v4.1 26 18
Ectocarpus_siliculosus 94 53
Aureococcus_anophagefferens_ 65 37
Albugo_laibachii_22 54 44
Pythium_iwayamai_DAOM_BR242034_22 94 63
Pythium_arrhenomanes_ATCC_12531_22 95 65
Pythium_ultimum_v1.7-2 93 64
Pythium_aphanidermatum_DAOM_BR444_22 101 63
Pythium_irregulare_DAOM_BR486_22 100 68
Pythium_vexans_DAOM_BR484_22 90 61
Phytophthora_ramorum_1.1   (Sudden oak death agent)   84 56
Phytophthora_sojae_1.1 91 65
Phytophthora_infestans_T30-4_ 105 73
Phytophthora_capsici_ 63 47
Hyaloperonospora_arabidopsidis_22 67 42
Phaeodactylum_tricornutumCCAP_1055/1 30 20
Fragilariopsis_cylindrus 34 26
Thalassiosira_pseudonana_CCMP1335 16 15
Perkinsus_marinus_ATCC_50983_ 28 25
Paramecium_tetraurelia_ 158 111
Tetrahymena_thermophila_SB210_1_ 92 55
Ichthyophthirius_multifiliis_strain_G5_ 55 31
Cryptosporidium_hominis 14 7
Cryptosporidium_muris 16 6
Cryptosporidium_parvum_Iowa_II 16 6
Neospora_caninum 23 14
Toxoplasma_gondii_VEG 22 14
Toxoplasma_gondii_ME49 23 15
Toxoplasma_gondii_GT1 23 15
Babesia_bovis_T2Bo_ 20 10
Theileria_parva__ 10 7
Theileria_annulata 10 5
Plasmodium_falciparum_3D7_ 15 7
Plasmodium_vivax_SaI-1_7.0 17 9
Plasmodium_knowlesi_strain_H_ 17 9
Plasmodium_yoelii_ssp._yoelii_1_ 14 7
Plasmodium_chabaudi_ 16 8
Plasmodium_berghei_ANKA_ 16 8
Symbiodinium_minutum_clade_B1_v1.2 136 112
Naegleria_gruberi_ 98 88
Trichomonas_vaginalis_ 134 97
Guillardia_theta_CCMP2712_v1.0_ 192 158
Emiliania_huxleyi_CCMP1516_ 77 63
Flexibacter_litoralis_DSM_6794 1 1
Isosphaera_pallida_ATCC_43644 1 1
Sorangium_cellulosum_'So_ce_56' 1 1
Corallococcus_coralloides_DSM_2259 1 1
Shewanella_violacea_DSS12 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   408 261
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   205 144
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   99 65
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   84 64
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   141 100
Cryptococcus_neoformans_var._grubii_H99_ 20 13
Cryptococcus_neoformans_B-3501A_ 20 13
Cryptococcus_neoformans_JEC21_ 19 12
Paracoccidioides_brasiliensis_Pb01_ 17 12
Paracoccidioides_brasiliensis_Pb03_ 18 13
Coccidioides_posadasii_str._Silveira_ 19 13
Coccidioides_immitis_RMSCC_3703_ 16 13
Coccidioides_immitis_RMSCC_2394_ 19 13
Coccidioides_immitis_H538.4_ 18 13
Ajellomyces_dermatitidis_ER-3_ 18 12
Histoplasma_capsulatum_H143 15 9
Histoplasma_capsulatum_H88 19 13
Histoplasma_capsulatum_G186AR 21 14
Aspergillus_fumigatus_A1163_ 19 13
Candida_albicans_WO-1_ 14 9
Saccharomyces_cerevisiae_UC5 21 10
Saccharomyces_cerevisiae_PW5 23 12
Saccharomyces_cerevisiae_CLIB324 3 3
Saccharomyces_cerevisiae_CBS7960 9 5
Saccharomyces_cerevisiae_YJM269 14 9
Saccharomyces_cerevisiae_T7 21 12
Saccharomyces_cerevisiae_FostersB 12 8
Saccharomyces_cerevisiae_FostersO 14 8
Saccharomyces_cerevisiae_VL3 16 9
Saccharomyces_cerevisiae_Vin13 18 11
Saccharomyces_cerevisiae_LalvinQA23 14 11
Saccharomyces_cerevisiae_AWRI796 17 10
Saccharomyces_cerevisiae_Sigma1278b 23 12
Saccharomyces_cerevisiae_W303 20 12
Saccharomyces_cerevisiae_JAY291 23 12
Saccharomyces_cerevisiae_AWRI1631 10 7
Saccharomyces_cerevisiae_YPS163 2 2
Saccharomyces_cerevisiae_M22 2 2
Saccharomyces_cerevisiae_T73 7 4
Saccharomyces_cerevisiae_CLIB215 10 6
Saccharomyces_cerevisiae_Y10 2 2
Saccharomyces_cerevisiae_YJM789_ 23 12
Saccharomyces_cerevisiae_YJM789 23 12
Saccharomyces_cerevisiae_RM11-1a 20 12
Saccharomyces_cerevisiae_RM11-1a_ 18 10
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   23 12
Schizosaccharomyces_pombe_972h-_ 22 16
Batrachochytrium_dendrobatidis_JEL423_ 27 18
Batrachochytrium_dendrobatidis_JAM81_ 23 16
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   132 89
Hordeum_vulgare_22   (Domesticated barley)   306 208
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   146 101
Trypanosoma_brucei_Lister_427_v4.1 27 18
Neospora_caninum_Nc-Liverpool_6.2 23 14
Plasmodium_falciparum_HB3_ 13 5
Plasmodium_falciparum_Dd2_ 8 4
Nocardia_brasiliensis_ATCC_700358 1 1
Singulisphaera_acidiphila_DSM_18658 1 1
Sorangium_cellulosum_So0157-2 1 1
Hyphomicrobium_nitrativorans_NL23 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   274 164
Pan_troglodytes_69_2.1.4   (Chimpanzee)   224 141
Gorilla_gorilla_69_3.1   (Western gorilla)   256 153
Pongo_abelii_69_2   (Sumatran orangutan)   237 150
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   242 148
Macaca_mulatta_69_1   (Rhesus monkey)   240 150
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   252 152
Otolemur_garnettii_69_3   (Small-eared galago)   242 149
Microcebus_murinus_69_1   (Gray mouse lemur)   188 123
Rattus_norvegicus_69_3.4   (Norway rat)   253 152
Mus_musculus_69_38   (House mouse)   255 150
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   198 125
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   227 147
Cavia_porcellus_69_3   (Domestic guinea pig)   243 149
Oryctolagus_cuniculus_69_2   (Rabbit)   222 136
Ochotona_princeps_69   (American pika)   194 126
Tupaia_belangeri_69   (Northern tree shrew)   162 105
Sus_scrofa_69_10.2   (Pig)   224 147
Bos_taurus_69_3.1   (Cattle)   243 148
Vicugna_pacos_69_1   (Alpaca)   116 76
Tursiops_truncatus_69_1   (Bottlenose dolphin)   232 142
Mustela_putorius_furo_69_1.0   (Domestic ferret)   254 149
Ailuropoda_melanoleuca_69_1   (Giant panda)   247 149
Canis_familiaris_69_3.1   (Dog)   259 155
Felis_catus_69   (Domestic cat)   176 111
Equus_caballus_69_2   (Horse)   241 146
Myotis_lucifugus_69_2.0   (Little brown bat)   229 143
Pteropus_vampyrus_69_1   (Large flying fox)   228 140
Sorex_araneus_69_1   (European shrew)   133 82
Erinaceus_europaeus_69   (Western European hedgehog)   153 110
Procavia_capensis_69_1   (Cape rock hyrax)   203 133
Loxodonta_africana_69_3   (African savanna elephant)   231 144
Echinops_telfairi_69   (Small Madagascar hedgehog)   168 112
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   154 106
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   112 76
Macropus_eugenii_69_1.0   (Tammar wallaby)   191 122
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   209 134
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   227 140
Ornithorhynchus_anatinus_69_5   (Platypus)   206 151
Petromyzon_marinus_69_7.0   (Sea lamprey)   101 73
Meleagris_gallopavo_69_2   (Turkey)   206 135
Gallus_gallus_69_2   (Chicken)   206 131
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   214 145
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   227 150
Anolis_carolinensis_69_2.0   (Green anole)   234 149
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   262 161
Latimeria_chalumnae_69_1   (Coelacanth)   258 162
Gadus_morhua_69_1   (Atlantic cod)   300 183
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   334 205
Takifugu_rubripes_69_4   (Torafugu)   336 205
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   323 195
Oryzias_latipes_69_1   (Japanese medaka)   299 189
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   333 206
Oreochromis_niloticus_69_1.0   (Nile tilapia)   356 215
Danio_rerio_69_9   (Zebrafish)   347 216
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   93 55
Ciona_intestinalis_69   (Vase tunicate)   102 67
Drosophila_melanogaster_69_5   (Fruit fly)   73 50
Caenorhabditis_elegans_69_215   (Roundworm)   75 52
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   23 12
Arabidopsis_thaliana_10   (Thale cress)   168 111

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   1104 696
Homo_sapiens__(NCBI_version)   (Human)   537 284
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   245 147
Heliconius_numata__(Incomplete) 8 8
Loa_loa_v3.3_(Request)   (Eye worm)   69 50
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   65 57
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   51 37
Moniliophthora_perniciosa_FA553__(Genome_survey) 10 9
Encephalitozoon_intestinalis__(endoparasite) 2 1
Encephalitozoon_cuniculi_(endoparasite) 2 1
Picea_sitchensis__(Incomplete)   (Sitka spruce)   13 13
Lotus_japonicus__(Early_assembly) 125 92
Malus_x_domestica_(Duplicate)   (Apple)   260 175
Ricinus_communis__(Early_assembly)   (Castor bean)   125 85
Nicotiana_benthamiana_0.4.4_(Early_draft) 280 202
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   163 113
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   168 117
Phoenix_dactylifera__(Early_draft)   (Date palm)   78 63
Protein_Data_Bank_(all_PDB_sequenc) 520 493
PDB_chains_(SCOP_1.75)_(PDB) 37 35
Protozoadb_2010_08_(Protozoadb) 933 661
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 991 991
STRING_v9.0.5_(STRING) 11460 7440
UniProt__viral_sequences_(Viral) 1 1
Uniprot_2018_03_genome 127967 86310
NCBI_2017_08_genome 203761 124868
TargetDB__(Targets) 336 272

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