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Domain combinations for Osmotin, thaumatin-like protein superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Osmotin, thaumatin-like protein domain in that genome.

Complete genomes
Genome     Number   Proteins
Adineta_vaga 5 5
Crassostrea_gigas_22   (Pacific oyster)   1 1
Tribolium_castaneum_3.0   (Red flour beetle)   5 5
Acyrthosiphon_pisum_   (Pea aphid)   7 7
Pristionchus_pacificus_ 5 5
Meloidogyne_incognita_   (Southern root-knot nematode)   3 3
Meloidogyne_hapla_ 2 2
Caenorhabditis_japonica_ 9 9
Caenorhabditis_brenneri_ 8 8
Caenorhabditis_remanei_ 13 13
Caenorhabditis_elegans_76_235   (Roundworm)   6 6
Caenorhabditis_briggsae_2 6 6
Phycomyces_blakesleeanus_ 5 5
Rhizopus_oryzae_RA_99-880_ 6 6
Mucor_circinelloides_ 5 5
Rhizomucor_miehei_CAU432_ 6 6
Sporisorium_reilianum_22 1 1
Ustilago_maydis_ 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 2 2
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 9 9
Melampsora_laricis-populina_ 3 3
Rhodotorula_graminis_WP1_v1.0 4 4
Sporobolomyces_roseus_IAM_13481_ 5 4
Sphaerobolus_stellatus_v1.0 16 16
Piloderma_croceum_F_1598_v1.0 3 3
Serpula_lacrymans_var._lacrymans_S7.9_ 10 10
Coniophora_puteana 18 18
Hydnomerulius_pinastri_v2.0 6 6
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 2 2
Pisolithus_tinctorius_Marx_270_v1.0 3 3
Scleroderma_citrinum_Foug_A_v1.0 2 2
Coprinopsis_cinerea_okayama7_130_v3 5 5
Pleurotus_ostreatus_   (Oyster mushroom)   5 5
Amanita_thiersii_Skay4041_v1.0 5 5
Amanita_muscaria_Koide_v1.0   (Fly agaric)   3 3
Galerina_marginata_v1.0 7 7
Hebeloma_cylindrosporum_h7_v2.0 6 6
Laccaria_bicolor_S238N-H82_ 2 2
Agaricus_bisporus_var._bisporus_ 5 5
Schizophyllum_commune_ 11 11
Stereum_hirsutum_FP-91666_SS1__v1.0 13 13
Heterobasidion_annosum_ 3 3
Gloeophyllum_trabeumv1.0 11 11
Punctularia_strigosozonata_v1.0 5 5
Sebacina_vermifera_MAFF_305830_v1.0 1 1
Fomitiporia_mediterranea_v1.0 10 10
Tulasnella_calospora_AL13/4D_v1.0 7 7
Postia_placenta_ 4 4
Wolfiporia_cocos_MD-104_SS10__v1.0 4 4
Fomitopsis_pinicolav1.0 17 17
Fomitopsis_pinicola_FP-58527_SS1_v3.0 17 17
Phanerochaete_chrysosporium_RP-78_2.1 4 4
Dichomitus_squalens 4 4
Trametes_versicolor_v1.0 9 9
Tremella_mesenterica_   (Witches' butter)   3 3
Daldinia_eschscholzii_EC12_v1.0 4 4
Apiospora_montagnei_NRRL_25634_v1.0 4 4
Magnaporthe_poae_ATCC_64411_22 2 2
Magnaporthe_grisea_70-15_ 2 2
Podospora_anserina_ 1 1
Neurospora_tetrasperma_ 1 1
Neurospora_discreta_FGSC_8579_ 1 1
Neurospora_crassa_OR74A_ 1 1
Cryphonectria_parasitica_   (Chestnut blight fungus)   4 4
Verticillium_albo-atrum_VaMs.102_ 1 1
Verticillium_dahliae_VdLs.17_ 1 1
Glomerella_graminicola_22 2 2
Fusarium_graminearum_ 1 1
Nectria_haematococca_mpVI_ 1 1
Fusarium_oxysporum_f._sp._lycopersici_4286_ 1 1
Fusarium_verticillioides_7600_ 1 1
Trichoderma_asperellum_CBS_433.97_v1.0 3 3
Trichoderma_atroviride_ 3 3
Trichoderma_reesei_1.2 1 1
Trichoderma_virens_Gv29-8_ 2 2
Trichoderma_longibrachiatum_ATCC_18648_v1.0 1 1
Trichoderma_harzianum_CBS_226.95_v1.0 3 3
Amorphotheca_resinae_v1.0   (Creosote fungus)   2 2
Botrytis_cinerea_B05.10_ 2 2
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 3 3
Cochliobolus_victoriae_FI3_v1.0 3 3
Cochliobolus_carbonum_26-R-13_v1.0 3 3
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   3 3
Alternaria_brassicicola_ 4 4
Cochliobolus_lunatus_m118_v2.0 3 3
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 4 4
Stagonospora_nodorum_ 3 3
Mycosphaerella_graminicola_IPO323_ 2 2
Zasmidium_cellare_ATCC_36951_v1.0 2 2
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 2 2
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 3 3
Paracoccidioides_brasiliensis_Pb18_ 1 1
Coccidioides_posadasii_RMSCC_3488_ 1 1
Coccidioides_immitis_RS_ 1 1
Ajellomyces_dermatitidis_SLH14081_ 1 1
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 1 1
Microsporum_canis_CBS_113480_ 1 1
Trichophyton_equinum_CBS_127.97_ 1 1
Trichophyton_verrucosum_HKI_0517_ 1 1
Arthroderma_benhamiae_CBS_112371_ 1 1
Trichophyton_tonsurans_CBS_112818_ 1 1
Trichophyton_rubrum_CBS_118892_ 1 1
Uncinocarpus_reesii_1704_ 1 1
Aspergillus_zonatus_v1.0 1 1
Aspergillus_acidus_v1.0 1 1
Aspergillus_nidulans_FGSC_A4_ 2 2
Aspergillus_sydowii_v1.0 1 1
Aspergillus_versicolor_v1.0 1 1
Aspergillus_carbonarius_ITEM_5010_ 1 1
Aspergillus_terreus_NIH2624_ 1 1
Aspergillus_tubingensis_v1.0 1 1
Aspergillus_wentii_v1.0 1 1
Aspergillus_niger_22 1 1
Penicillium_marneffei_ATCC_18224_ 2 2
Tuber_melanosporum_Vittad_   (Perigord truffle)   1 1
Spizellomyces_punctatus_DAOM_BR117_ 2 2
Dictyostelium_discoideum 2 2
Selaginella_moellendorffii_ 28 28
Pinus_taeda   (Loblolly pine)   97 87
Picea_abies   (Norway spruce)   31 28
Eucalyptus_grandis_v201   (Rose gum)   66 66
Theobroma_cacao_B97-61/B2_v1   (Cacao)   32 30
Gossypium_raimondii_v221 65 65
Citrus_clementina_v165 28 28
Citrus_sinensis_v154   (Sweet orange)   25 25
Thellungiella_halophila_v173 28 28
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   40 40
Capsella_rubella_v183 36 36
Arabidopsis_lyrata_   (Lyrate rockcress)   31 30
Arabidopsis_thaliana_10   (Thale cress)   32 31
Carica_papaya_   (Papaya)   18 18
Medicago_truncatula_   (Barrel medic)   56 56
Phaseolus_vulgaris_v186   (French bean)   30 30
Glycine_max_v109   (Soybean)   59 59
Cucumis_sativus_v122   (Cucumber)   29 29
Fragaria_vesca_   (Wild strawberry)   36 35
Malus_domestica_v196   (Apple)   66 61
Prunus_persica_v139   (Peach)   38 38
Linum_usitatissimum_v200   (Flax)   45 43
Manihot_esculenta_v147   (Cassava)   33 33
Populus_trichocarpa_v156   (Black cottonwood)   54 54
Vitis_vinifera_   (Wine grape)   24 24
Mimulus_guttatus_v140   (Spotted monkey flower)   34 34
Solanum_lycopersicum_v.2.3   (Tomato)   35 34
Solanum_tuberosum_   (Potato)   38 37
Actinidia_chinensis_Hongyang_ 30 30
Aquilegia_coerulea_v195 32 31
Triticum_urartu_22 48 47
Triticum_aestivum_22   (Bread wheat)   84 84
Aegilops_tauschii_22 43 43
Brachypodium_distachyon_   (Stiff brome)   35 35
Oryza_barthii_22   (African wild rice)   34 33
Oryza_meridionalis_22 32 31
Oryza_glumaepatula_22 39 38
Oryza_glaberrima   (African rice)   33 33
Oryza_punctata_22 41 39
Oryza_nivara_22 47 43
Oryza_brachyantha_22   (Malo sina)   33 30
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   46 46
Oryza_sativa_v193   (Rice)   46 46
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   43 43
Panicum_virgatum_v202   (Switchgrass)   65 65
Setaria_italica_v164   (Foxtail millet)   47 46
Zea_mays_subsp._mays_   (Maize)   62 62
Zea_mays_v181   (Maize)   67 67
Sorghum_bicolor_   (Sorghum)   46 46
Musa_balbisiana   (Balbis banana)   42 41
Musa_acuminata_22   (Wild Malaysian banana)   42 41
Amborella_trichopoda_22 16 16
Physcomitrella_patens 7 7
Chlamydomonas_reinhardtii_4.0 1 1
Bigelowiella_natans_CCMP2755_22 3 3
Ectocarpus_siliculosus 5 4
Albugo_laibachii_22 2 2
Pythium_iwayamai_DAOM_BR242034_22 7 7
Pythium_arrhenomanes_ATCC_12531_22 7 7
Pythium_ultimum_v1.7-2 12 12
Pythium_aphanidermatum_DAOM_BR444_22 9 9
Pythium_irregulare_DAOM_BR486_22 12 12
Pythium_vexans_DAOM_BR484_22 14 14
Phytophthora_ramorum_1.1   (Sudden oak death agent)   12 10
Phytophthora_sojae_1.1 14 14
Phytophthora_infestans_T30-4_ 10 10
Phytophthora_capsici_ 12 12
Hyaloperonospora_arabidopsidis_22 3 3
Symbiodinium_minutum_clade_B1_v1.2 12 10
Emiliania_huxleyi_CCMP1516_ 1 1
Catenulispora_acidiphila_DSM_44928 2 2
Streptomyces_violaceusniger_Tu_4113 1 1
Amycolatopsis_mediterranei_U32 1 1
Verrucosispora_maris_AB-18-032 1 1
Desulfomonile_tiedjei_DSM_6799 2 2
Syntrophobacter_fumaroxidans_MPOB 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Geobacter_lovleyi_SZ 1 1
Sorangium_cellulosum_'So_ce_56' 1 1
Stigmatella_aurantiaca_DW4/3-1 4 4
Corallococcus_coralloides_DSM_2259 1 1
Myxococcus_fulvus_HW-1 1 1
Methylocella_silvestris_BL2 1 1
Methylococcus_capsulatus_str._Bath 1 1
Halothiobacillus_neapolitanus_c2 1 1
Legionella_longbeachae_NSW150 1 1
Legionella_pneumophila_str._Corby 1 1

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Strains
Genome     Number   Proteins
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   6 6
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 2 2
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 1 1
Paracoccidioides_brasiliensis_Pb03_ 1 1
Coccidioides_posadasii_str._Silveira_ 1 1
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 1 1
Coccidioides_immitis_H538.4_ 1 1
Ajellomyces_dermatitidis_ER-3_ 1 1
Histoplasma_capsulatum_H143 1 1
Histoplasma_capsulatum_H88 1 1
Histoplasma_capsulatum_G186AR 1 1
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   27 27
Hordeum_vulgare_22   (Domesticated barley)   35 35
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   51 51
Cyanothece_sp._PCC_7425 1 1
Streptomyces_rapamycinicus_NRRL_5491 1 1
Streptomyces_davawensis_JCM_4913 1 1
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Sorangium_cellulosum_So0157-2 2 2
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 2 1
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 1 1
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 2 1
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila 2 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 2 1
Legionella_pneumophila_2300/99_Alcoy 1 1

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Longest transcript per gene
Genome     Number   Proteins
Caenorhabditis_elegans_69_215   (Roundworm)   6 6
Arabidopsis_thaliana_10   (Thale cress)   25 24

Others
Genome     Number   Proteins
Moniliophthora_perniciosa_FA553__(Genome_survey) 7 7
Picea_sitchensis__(Incomplete)   (Sitka spruce)   4 4
Lotus_japonicus__(Early_assembly) 29 29
Malus_x_domestica_(Duplicate)   (Apple)   66 61
Ricinus_communis__(Early_assembly)   (Castor bean)   26 26
Nicotiana_benthamiana_0.4.4_(Early_draft) 55 50
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   35 34
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   35 34
Phoenix_dactylifera__(Early_draft)   (Date palm)   3 3
TargetDB__(Targets) 3 3
UniProt__viral_sequences_(Viral) 3 3
Protein_Data_Bank_(all_PDB_sequenc) 153 153
NCBI_viral_sequences_(Viral) 2 2
STRING_v9.0.5_(STRING) 438 433
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 449 449
NCBI_2017_08_genome 4780 4503
Uniprot_2018_03_genome 6664 6557
PDB_chains_(SCOP_1.75)_(PDB) 7 7

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