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Domain combinations for YVTN repeat-like/Quinoprotein amine dehydrogenase superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a YVTN repeat-like/Quinoprotein amine dehydrogenase domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   19 19
Pan_troglodytes_76_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_76_3.1   (Western gorilla)   11 11
Pongo_abelii_76_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   9 9
Papio_anubis_76   (Olive baboon)   9 9
Macaca_mulatta_76_1   (Rhesus monkey)   14 14
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   13 13
Otolemur_garnettii_76_3   (Small-eared galago)   8 8
Microcebus_murinus_76_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_76_5.0   (Norway rat)   13 13
Mus_musculus_76_38   (House mouse)   18 18
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   7 7
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   6 6
Cavia_porcellus_76_3   (Domestic guinea pig)   8 8
Oryctolagus_cuniculus_76_2   (Rabbit)   5 5
Ochotona_princeps_76   (American pika)   2 2
Tupaia_belangeri_76   (Northern tree shrew)   2 2
Sus_scrofa_76_10.2   (Pig)   3 3
Bos_taurus_76_3.1   (Cattle)   6 6
Ovis_aries_76_3.1   (Sheep)   5 5
Vicugna_pacos_76_1   (Alpaca)   3 3
Tursiops_truncatus_76_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_76_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_76_1   (Giant panda)   10 10
Canis_familiaris_76_3.1   (Dog)   14 14
Felis_catus_76_6.2   (Domestic cat)   9 9
Equus_caballus_76_2   (Horse)   14 14
Myotis_lucifugus_76_2.0   (Little brown bat)   5 5
Pteropus_vampyrus_76_1   (Large flying fox)   6 6
Sorex_araneus_76_1   (European shrew)   4 4
Erinaceus_europaeus_76   (Western European hedgehog)   5 5
Procavia_capensis_76_1   (Cape rock hyrax)   5 5
Loxodonta_africana_76_3   (African savanna elephant)   12 12
Echinops_telfairi_76   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   5 5
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   5 5
Macropus_eugenii_76_1.0   (Tammar wallaby)   5 5
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   9 9
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   8 8
Ornithorhynchus_anatinus_76_5   (Platypus)   11 10
Saccoglossus_kowalevskii_v3.0 14 13
Petromyzon_marinus_76_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_76_2   (Turkey)   4 4
Gallus_gallus_76_4   (Chicken)   10 10
Anas_platyrhynchos_76_1.0   (Mallard)   6 6
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   7 7
Ficedula_albicollis_76_1.0   (Collared flycatcher)   8 8
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   7 7
Anolis_carolinensis_76_2.0   (Green anole)   5 5
Xenopus_laevis_   (African clawed frog)   11 11
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   8 8
Latimeria_chalumnae_76_1   (Coelacanth)   6 6
Lepisosteus_oculatus_76   (Spotted gar)   5 5
Gadus_morhua_76_1   (Atlantic cod)   12 12
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   14 14
Takifugu_rubripes_76_4   (Torafugu)   22 22
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   11 11
Oryzias_latipes_76_1   (Japanese medaka)   15 15
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   5 5
Poecilia_formosa_76   (Amazon molly)   8 8
Oreochromis_niloticus_76_1.0   (Nile tilapia)   11 11
Astyanax_mexicanus_76   (Mexican tetra)   11 11
Danio_rerio_76_9   (Zebrafish)   11 11
Oikopleura_dioica 4 4
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   16 16
Ciona_intestinalis_76   (Vase tunicate)   6 6
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   59 56
Adineta_vaga 22 22
Octopus_bimaculoides_280 10 8
Crassostrea_gigas_22   (Pacific oyster)   20 18
Lottia_gigantea_   (Owl limpet)   7 7
Helobdella_robusta_ 7 7
Capitella_sp._I_ 11 11
Danaus_plexippus_OGS1.0   (Monarch butterfly)   4 4
Heliconius_melpomene_   (Postman butterfly)   6 6
Bombyx_mori_   (Domestic silkworm)   8 8
Nasonia_vitripennis_   (Jewel wasp)   2 2
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   9 9
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   5 5
Linepithema_humile_v1.1   (Argentine ant)   4 4
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   4 4
Solenopsis_invicta_v.2.2.3   (Red fire ant)   6 6
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   4 4
Atta_cephalotes_v1.1 4 4
Camponotus_floridanus_v3.3   (Florida carpenter ant)   6 6
Lucilia_cuprina   (Australian sheep blowfly)   2 2
Drosophila_grimshawi_1.3 5 4
Drosophila_willistoni_1.3 3 2
Drosophila_pseudoobscura_2.13 5 4
Drosophila_persimilis_1.3 6 5
Drosophila_suzukii 5 5
Drosophila_yakuba_1.3 4 4
Drosophila_simulans_1.3 5 5
Drosophila_sechellia_1.3 5 5
Drosophila_melanogaster_76_5   (Fruit fly)   13 13
Drosophila_erecta_1.3 3 3
Drosophila_ananassae_1.3 7 7
Drosophila_virilis_1.2 5 5
Drosophila_mojavensis_1.3 7 6
Megaselia_scalaris_22 2 2
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   7 6
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   3 3
Anopheles_darlingi_22   (American malaria mosquito)   3 3
Anopheles_gambiae_49_3j   (African malaria mosquito)   2 2
Tribolium_castaneum_3.0   (Red flour beetle)   3 3
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   3 3
Acyrthosiphon_pisum_   (Pea aphid)   2 2
Rhodnius_prolixus_22 2 2
Daphnia_pulex_   (Common water flea)   2 2
Strigamia_maritima_22 6 6
Sarcoptes_scabiei 3 3
Tetranychus_urticae_   (Two-spotted spider mite)   5 5
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   3 3
Pristionchus_pacificus_ 5 5
Meloidogyne_hapla_ 1 1
Onchocerca_volvulus_22 6 5
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   3 3
Caenorhabditis_japonica_ 2 2
Caenorhabditis_brenneri_ 2 2
Caenorhabditis_remanei_ 6 6
Caenorhabditis_elegans_76_235   (Roundworm)   4 4
Trichinella_spiralis_22 1 1
Hymenolepis_microstoma_ 3 3
Echinococcus_multilocularis_ 3 3
Echinococcus_granulosus_ 2 2
Taenia_solium_   (Pork tapeworm)   5 5
Schistosoma_mansoni_ 4 4
Mnemiopsis_leidyi   (Sea walnut)   6 5
Thelohanellus_kitauei 2 2
Acropora_digitifera_v1.0 13 13
Nematostella_vectensis_1.0   (Starlet sea anemone)   7 7
Hydra_vulgaris 3 3
Amphimedon_queenslandica 5 5
Trichoplax_adhaerens_ 3 3
Proterospongia_sp._ATCC_50818_ 19 18
Monosiga_brevicollis_ 6 6
Sphaeroforma_arctica_JP610_ 3 3
Capsaspora_owczarzaki_ATCC_30864_ 3 3
Conidiobolus_coronatus_NRRL28638_v1.0 3 3
Mortierella_verticillata_NRRL_6337_ 2 2
Phycomyces_blakesleeanus_ 2 2
Rhizopus_oryzae_RA_99-880_ 3 3
Mucor_circinelloides_ 1 1
Rhizomucor_miehei_CAU432_ 1 1
Malassezia_globosa_CBS_7966_ 2 2
Sporisorium_reilianum_22 5 5
Ustilago_maydis_ 3 3
Mixia_osmundae_IAM_14324_v1.0 1 1
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 1 1
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 1 1
Melampsora_laricis-populina_ 1 1
Rhodotorula_graminis_WP1_v1.0 4 4
Microbotryum_violaceum_22 6 6
Wallemia_sebi_v1.0 1 1
Sphaerobolus_stellatus_v1.0 12 11
Piloderma_croceum_F_1598_v1.0 8 8
Serpula_lacrymans_var._lacrymans_S7.9_ 4 4
Coniophora_puteana 14 14
Hydnomerulius_pinastri_v2.0 5 4
Paxillus_rubicundulus_Ve08.2h10_v1.0 2 2
Pisolithus_microcarpus_441_v1.0 7 7
Pisolithus_tinctorius_Marx_270_v1.0 4 4
Scleroderma_citrinum_Foug_A_v1.0 1 1
Coprinopsis_cinerea_okayama7_130_v3 2 2
Pleurotus_ostreatus_   (Oyster mushroom)   2 2
Amanita_thiersii_Skay4041_v1.0 9 8
Amanita_muscaria_Koide_v1.0   (Fly agaric)   16 14
Galerina_marginata_v1.0 7 7
Hebeloma_cylindrosporum_h7_v2.0 5 5
Laccaria_bicolor_S238N-H82_ 11 11
Agaricus_bisporus_var._bisporus_ 5 5
Schizophyllum_commune_ 1 1
Stereum_hirsutum_FP-91666_SS1__v1.0 2 2
Heterobasidion_annosum_ 2 2
Gloeophyllum_trabeumv1.0 3 3
Punctularia_strigosozonata_v1.0 7 7
Sebacina_vermifera_MAFF_305830_v1.0 11 11
Fomitiporia_mediterranea_v1.0 9 9
Tulasnella_calospora_AL13/4D_v1.0 7 7
Postia_placenta_ 4 4
Wolfiporia_cocos_MD-104_SS10__v1.0 5 5
Fomitopsis_pinicolav1.0 5 5
Fomitopsis_pinicola_FP-58527_SS1_v3.0 4 4
Phanerochaete_chrysosporium_RP-78_2.1 4 4
Dichomitus_squalens 5 5
Tremella_mesenterica_   (Witches' butter)   2 2
Daldinia_eschscholzii_EC12_v1.0 4 4
Apiospora_montagnei_NRRL_25634_v1.0 2 2
Magnaporthe_poae_ATCC_64411_22 7 7
Magnaporthe_grisea_70-15_ 5 5
Podospora_anserina_ 6 6
Sporotrichum_thermophile_ATCC_42464_ 7 7
Thielavia_terrestris_NRRL_8126_ 2 2
Chaetomium_globosum_CBS_148.51_ 4 4
Neurospora_tetrasperma_ 3 3
Neurospora_discreta_FGSC_8579_ 4 4
Neurospora_crassa_OR74A_ 4 4
Cryphonectria_parasitica_   (Chestnut blight fungus)   3 3
Verticillium_albo-atrum_VaMs.102_ 2 2
Verticillium_dahliae_VdLs.17_ 2 2
Acremonium_alcalophilumv_1.0 5 5
Glomerella_graminicola_22 6 6
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 5 5
Fusarium_oxysporum_f._sp._lycopersici_4286_ 8 7
Fusarium_verticillioides_7600_ 8 8
Trichoderma_asperellum_CBS_433.97_v1.0 7 7
Trichoderma_atroviride_ 7 7
Trichoderma_citrinoviride_v1.0 4 4
Trichoderma_reesei_1.2 10 10
Trichoderma_virens_Gv29-8_ 7 7
Trichoderma_longibrachiatum_ATCC_18648_v1.0 8 8
Trichoderma_harzianum_CBS_226.95_v1.0 12 12
Amorphotheca_resinae_v1.0   (Creosote fungus)   3 3
Botrytis_cinerea_B05.10_ 6 6
Sclerotinia_sclerotiorum_ 2 2
Blumeria_graminis_22 1 1
Didymella_exigua_CBS_183.55_v1.0 3 3
Leptosphaeria_maculans_22 3 3
Setosphaeria_turcica_v1.0 3 3
Cochliobolus_miyabeanus_ATCC_44560_v1.0 4 4
Cochliobolus_victoriae_FI3_v1.0 5 5
Cochliobolus_carbonum_26-R-13_v1.0 5 5
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   4 4
Alternaria_brassicicola_ 4 4
Cochliobolus_lunatus_m118_v2.0 2 2
Pyrenophora_teres_f._teres_22 3 3
Pyrenophora_tritici-repentis_ 3 3
Stagonospora_nodorum_ 3 3
Mycosphaerella_graminicola_IPO323_ 3 3
Zasmidium_cellare_ATCC_36951_v1.0 3 3
Dothistroma_septosporum 2 2
Septoria_musiva_v1.0 2 2
Mycosphaerella_fijiensis_CIRAD86_ 3 3
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 4 4
Paracoccidioides_brasiliensis_Pb18_ 3 3
Coccidioides_posadasii_RMSCC_3488_ 2 2
Coccidioides_immitis_RS_ 2 2
Ajellomyces_dermatitidis_SLH14081_ 5 5
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 3 3
Microsporum_canis_CBS_113480_ 2 2
Trichophyton_equinum_CBS_127.97_ 4 4
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 6 6
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 4 4
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 2 2
Penicillium_chrysogenum_Wisconsin_54-1255_ 8 8
Penicillium_chrysogenum_v1.0 6 6
Aspergillus_acidus_v1.0 4 4
Aspergillus_fumigatus_Af293 6 6
Aspergillus_brasiliensis_v1.0 5 5
Aspergillus_nidulans_FGSC_A4_ 6 6
Aspergillus_sydowii_v1.0 10 10
Aspergillus_versicolor_v1.0 5 5
Aspergillus_glaucus 4 4
Aspergillus_carbonarius_ITEM_5010_ 4 4
Neosartorya_fischeri_NRRL_181_ 9 9
Aspergillus_terreus_NIH2624_ 4 4
Aspergillus_tubingensis_v1.0 6 6
Aspergillus_wentii_v1.0 11 11
Aspergillus_oryzae_RIB40_ 5 5
Aspergillus_niger_22 5 5
Aspergillus_niger_ATCC_1015_ 3 3
Aspergillus_flavus_NRRL3357_ 9 9
Aspergillus_clavatus_NRRL_1_ 6 6
Penicillium_marneffei_ATCC_18224_ 4 4
Tuber_melanosporum_Mel28_22 3 3
Tuber_melanosporum_Vittad_   (Perigord truffle)   3 3
Hansenula_polymorpha_v2.0 3 3
Dekkera_bruxellensis_CBS_2499_v2.0 2 2
Pichia_membranifaciensv1.0 4 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 4 4
Candida_dubliniensis_CD36_ 4 4
Candida_tropicalis_MYA-3404_ 4 4
Candida_parapsilosis_ 7 7
Candida_albicans_SC5314 3 3
Lodderomyces_elongisporus_NRRL_YB-4239_ 1 1
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 2 2
Candida_guilliermondii_ATCC_6260_ 6 6
Debaromyces_hansenii 5 5
Wickerhamomyces_anomalus 2 2
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 2 2
Yarrowia_lipolytica_CLIB122 1 1
Candida_lusitaniae_ATCC_42720_ 2 2
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 5 5
Vanderwaltozyma_polyspora_DSM_70294_ 4 4
Candida_glabrata_CBS138 2 2
Kluyveromyces_thermotolerans_CBS_6340 2 2
Lachancea_kluyveri_ 2 2
Kluyveromyces_waltii 4 4
Ashbya_gossypii_ATCC_10895_ 5 5
Zygosaccharomyces_rouxii_ 1 1
Saccharomyces_mikatae_MIT 3 3
Saccharomyces_paradoxus_MIT 2 2
Saccharomyces_cerevisiae_76   (Baker's yeast)   3 3
Saccharomyces_bayanus_MIT 3 3
Kluyveromyces_lactis 4 4
Schizosaccharomyces_cryophilus_OY26_22 2 2
Schizosaccharomyces_octosporus_yFS286_ 2 2
Schizosaccharomyces_japonicus_yFS275_ 1 1
Schizosaccharomyces_pombe   (Fission yeast)   3 3
Catenaria_anguillulae_PL171_v1.0 1 1
Allomyces_macrogynus_ATCC_38327_ 8 8
Spizellomyces_punctatus_DAOM_BR117_ 1 1
Dictyostelium_discoideum 3 3
Dictyostelium_purpureum_ 2 2
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 4 4
Entamoeba_histolytica_1 4 4
Selaginella_moellendorffii_ 6 6
Pinus_taeda   (Loblolly pine)   4 4
Picea_abies   (Norway spruce)   4 3
Eucalyptus_grandis_v201   (Rose gum)   5 5
Theobroma_cacao_B97-61/B2_v1   (Cacao)   4 4
Gossypium_raimondii_v221 7 6
Citrus_clementina_v165 4 4
Citrus_sinensis_v154   (Sweet orange)   13 13
Thellungiella_halophila_v173 10 10
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   7 7
Capsella_rubella_v183 7 7
Arabidopsis_lyrata_   (Lyrate rockcress)   3 3
Arabidopsis_thaliana_10   (Thale cress)   10 10
Carica_papaya_   (Papaya)   2 2
Medicago_truncatula_   (Barrel medic)   12 12
Phaseolus_vulgaris_v186   (French bean)   5 5
Glycine_max_v109   (Soybean)   13 12
Fragaria_vesca_   (Wild strawberry)   5 5
Malus_domestica_v196   (Apple)   12 12
Prunus_persica_v139   (Peach)   1 1
Linum_usitatissimum_v200   (Flax)   9 8
Manihot_esculenta_v147   (Cassava)   2 2
Populus_trichocarpa_v156   (Black cottonwood)   7 7
Vitis_vinifera_   (Wine grape)   2 2
Solanum_lycopersicum_v.2.3   (Tomato)   3 3
Solanum_tuberosum_   (Potato)   11 11
Actinidia_chinensis_Hongyang_ 9 8
Aquilegia_coerulea_v195 6 6
Triticum_urartu_22 10 10
Triticum_aestivum_22   (Bread wheat)   14 14
Aegilops_tauschii_22 14 14
Brachypodium_distachyon_   (Stiff brome)   9 9
Oryza_barthii_22   (African wild rice)   13 13
Oryza_meridionalis_22 12 12
Oryza_glumaepatula_22 7 7
Oryza_glaberrima   (African rice)   11 11
Oryza_punctata_22 8 7
Oryza_nivara_22 16 15
Oryza_brachyantha_22   (Malo sina)   6 6
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   11 11
Oryza_sativa_v193   (Rice)   10 10
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   7 7
Panicum_virgatum_v202   (Switchgrass)   21 21
Setaria_italica_v164   (Foxtail millet)   11 11
Zea_mays_subsp._mays_   (Maize)   8 8
Zea_mays_v181   (Maize)   9 9
Sorghum_bicolor_   (Sorghum)   9 9
Musa_balbisiana   (Balbis banana)   7 6
Musa_acuminata_22   (Wild Malaysian banana)   1 1
Physcomitrella_patens 6 6
Coccomyxa_subellipsoidea_sp._C-169_v2 1 1
Asterochloris_sp._Cgr/DA1pho_v1.0 4 4
Chlorella_variabilis_sp._NC64A_ 7 7
Chlorella_vulgaris_ 2 2
Volvox_carteri_f._nagariensis_ 15 15
Volvox_carteri_v199 14 14
Chlamydomonas_reinhardtii_4.0 11 10
Ostreococcus_sp._RCC809_ 3 3
Ostreococcus_tauri_ 4 4
Bathycoccus_prasinos_ 6 6
Micromonas_sp._RCC299_ 6 6
Micromonas_pusilla_CCMP1545_v3.0 9 8
Cyanidioschyzon_merolae_strain_10D_22 3 3
Cyanidioschyzon_merolae 3 3
Porphyridium_purpureum_02_2012 4 4
Thecamonas_trahens_ATCC_50062_ 12 12
Bigelowiella_natans_CCMP2755_22 8 8
Giardia_lamblia_2.3 3 3
Cyanophora_paradoxa_ 23 23
Leishmania_mexicana_2.4 6 6
Leishmania_major_strain_Friedlin_ 5 5
Leishmania_infantum_JPCM5_2.4 2 2
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 6 6
Trypanosoma_vivax_ 6 6
Trypanosoma_cruzi_strain_CL_Brener 4 4
Trypanosoma_congolense_2.4 2 2
Trypanosoma_brucei_gambiense_v4.1 5 5
Trypanosoma_brucei_TREU927_v4.1 5 5
Ectocarpus_siliculosus 5 5
Aureococcus_anophagefferens_ 9 9
Albugo_laibachii_22 3 3
Pythium_iwayamai_DAOM_BR242034_22 4 4
Pythium_arrhenomanes_ATCC_12531_22 6 6
Pythium_ultimum_v1.7-2 3 3
Pythium_aphanidermatum_DAOM_BR444_22 3 3
Pythium_irregulare_DAOM_BR486_22 2 2
Pythium_vexans_DAOM_BR484_22 2 2
Phytophthora_ramorum_1.1   (Sudden oak death agent)   3 3
Phytophthora_sojae_1.1 4 4
Phytophthora_infestans_T30-4_ 6 6
Phytophthora_capsici_ 5 5
Hyaloperonospora_arabidopsidis_22 2 2
Phaeodactylum_tricornutumCCAP_1055/1 2 2
Fragilariopsis_cylindrus 10 10
Thalassiosira_pseudonana_CCMP1335 3 3
Perkinsus_marinus_ATCC_50983_ 13 13
Paramecium_tetraurelia_ 12 11
Tetrahymena_thermophila_SB210_1_ 55 50
Ichthyophthirius_multifiliis_strain_G5_ 3 3
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 1 1
Toxoplasma_gondii_VEG 2 2
Toxoplasma_gondii_ME49 4 3
Toxoplasma_gondii_GT1 4 4
Babesia_bovis_T2Bo_ 2 2
Plasmodium_falciparum_3D7_ 1 1
Plasmodium_vivax_SaI-1_7.0 1 1
Plasmodium_knowlesi_strain_H_ 5 5
Plasmodium_yoelii_ssp._yoelii_1_ 1 1
Plasmodium_chabaudi_ 3 3
Plasmodium_berghei_ANKA_ 2 2
Symbiodinium_minutum_clade_B1_v1.2 13 13
Naegleria_gruberi_ 31 31
Trichomonas_vaginalis_ 17 17
Guillardia_theta_CCMP2712_v1.0_ 9 9
Emiliania_huxleyi_CCMP1516_ 18 18
Leptolyngbya_sp._PCC_7376 2 1
Pseudanabaena_sp._PCC_7367 1 1
Acaryochloris_marina_MBIC11017 1 1
Synechocystis_sp._PCC_6803 3 3
Thermosynechococcus_elongatus_BP-1 1 1
Synechococcus_sp._PCC_6312 1 1
Synechococcus_sp._CC9311 1 1
Synechococcus_elongatus_PCC_7942 1 1
Microcoleus_sp._PCC_7113 2 2
Trichodesmium_erythraeum_IMS101 1 1
Cyanothece_sp._PCC_8802 1 1
Gloeocapsa_sp._PCC_7428 2 2
Halothece_sp._PCC_7418 1 1
Gloeobacter_violaceus_PCC_7421 6 6
Rivularia_sp._PCC_7116 2 2
Calothrix_sp._PCC_7507 1 1
Anabaena_variabilis_ATCC_29413 4 4
'Nostoc_azollae'_0708 1 1
Nostoc_sp._PCC_7107 1 1
Nostoc_punctiforme_PCC_73102 5 5
Nostoc_sp._PCC_7120 4 4
Nostoc_sp._PCC_7524 7 6
Anabaena_sp._90 2 2
Conexibacter_woesei_DSM_14684 1 1
Ilumatobacter_coccineus 2 2
Acidimicrobium_ferrooxidans_DSM_10331 1 1
Nakamurella_multipartita_DSM_44233 2 2
Blastococcus_saxobsidens_DD2 1 1
Geodermatophilus_obscurus_DSM_43160 4 4
Kineococcus_radiotolerans_SRS30216 1 1
Catenulispora_acidiphila_DSM_44928 5 5
Stackebrandtia_nassauensis_DSM_44728 4 4
Frankia_symbiont_of_Datisca_glomerata 3 2
Frankia_sp._EAN1pec 2 2
Frankia_alni_ACN14a 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 6 6
Thermomonospora_curvata_DSM_43183 1 1
Streptosporangium_roseum_DSM_43021 12 12
Kitasatospora_setae_KM-6054 6 6
Streptomyces_coelicolor_A3(2) 5 5
Streptomyces_sp._PAMC26508 5 5
Streptomyces_flavogriseus_ATCC_33331 5 5
Streptomyces_sp._SirexAA-E 5 5
Streptomyces_bingchenggensis_BCW-1 6 6
Streptomyces_violaceusniger_Tu_4113 2 2
Streptomyces_avermitilis_MA-4680 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_scabiei_87.22 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 6 6
Actinosynnema_mirum_DSM_43827 2 2
Saccharomonospora_viridis_DSM_43017 2 2
Pseudonocardia_dioxanivorans_CB1190 4 4
Saccharopolyspora_erythraea_NRRL_2338 5 5
Amycolatopsis_mediterranei_U32 1 1
Kribbella_flavida_DSM_17836 5 5
Nocardioides_sp._JS614 1 1
Microlunatus_phosphovorus_NM-1 2 2
Salinispora_arenicola_CNS-205 2 2
Salinispora_tropica_CNB-440 1 1
Verrucosispora_maris_AB-18-032 5 5
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 2 2
Actinoplanes_sp._N902-109 4 4
Actinoplanes_sp._SE50/110 11 11
Actinoplanes_missouriensis_431 11 11
Segniliparus_rotundus_DSM_44985 1 1
Tsukamurella_paurometabola_DSM_20162 1 1
Gordonia_sp._KTR9 2 2
Gordonia_polyisoprenivorans_VH2 4 4
Gordonia_bronchialis_DSM_43247 3 3
Rhodococcus_jostii_RHA1 5 5
Rhodococcus_equi_103S 3 3
Rhodococcus_opacus_B4 5 5
Rhodococcus_erythropolis_PR4 6 6
Nocardia_cyriacigeorgica_GUH-2 2 2
Nocardia_farcinica_IFM_10152 5 5
Amycolicicoccus_subflavus_DQS3-9A1 2 2
Mycobacterium_sp._JLS 2 2
Mycobacterium_vanbaalenii_PYR-1 4 4
Mycobacterium_rhodesiae_NBB3 1 1
Mycobacterium_ulcerans_Agy99 2 2
Mycobacterium_gilvum_PYR-GCK 6 6
Mycobacterium_chubuense_NBB4 4 3
Mycobacterium_marinum_M 1 1
Mycobacterium_smegmatis_str._MC2_155 3 3
Corynebacterium_resistens_DSM_45100 2 2
Corynebacterium_aurimucosum_ATCC_700975 2 2
Corynebacterium_kroppenstedtii_DSM_44385 1 1
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_ulcerans_0102 1 1
Corynebacterium_jeikeium_K411 1 1
Corynebacterium_variabile_DSM_44702 1 1
Corynebacterium_pseudotuberculosis_316 2 2
Corynebacterium_glutamicum_R 2 2
Corynebacterium_diphtheriae_NCTC_13129 1 1
Sanguibacter_keddieii_DSM_10542 1 1
Kytococcus_sedentarius_DSM_20547 1 1
Beutenbergia_cavernae_DSM_12333 2 2
Microbacterium_testaceum_StLB037 3 3
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 3 3
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 5 4
Brachybacterium_faecium_DSM_4810 1 1
Isoptericola_variabilis_225 1 1
Cellulomonas_flavigena_DSM_20109 2 2
Cellulomonas_fimi_ATCC_484 4 3
[Cellvibrio]_gilvus_ATCC_13127 2 2
Arthrobacter_chlorophenolicus_A6 2 2
Arthrobacter_aurescens_TC1 2 2
Kocuria_rhizophila_DC2201 1 1
Rothia_mucilaginosa_DY-18 4 4
Rothia_dentocariosa_ATCC_17931 5 5
Arthrobacter_sp._Rue61a 4 3
Arthrobacter_sp._FB24 1 1
Renibacterium_salmoninarum_ATCC_33209 2 2
Micrococcus_luteus_NCTC_2665 1 1
Actinomyces_sp._F0330 1 1
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 3 3
Dehalococcoides_sp._BAV1 1 1
Dehalogenimonas_lykanthroporepellens_BL-DC-9 1 1
Anaerolinea_thermophila_UNI-1 2 2
Thermomicrobium_roseum_DSM_5159 5 5
Sphaerobacter_thermophilus_DSM_20745 1 1
Herpetosiphon_aurantiacus_DSM_785 6 6
Roseiflexus_sp._RS-1 1 1
Chloroflexus_sp._MS-G 2 2
Chloroflexus_sp._Y-400-fl 2 2
Chloroflexus_aggregans_DSM_9485 2 2
Chloroflexus_aurantiacus_J-10-fl 2 2
Truepera_radiovictrix_DSM_17093 3 3
Deinococcus_gobiensis_I-0 6 6
Deinococcus_deserti_VCD115 1 1
Deinococcus_maricopensis_DSM_21211 2 2
Deinococcus_geothermalis_DSM_11300 4 4
Deinococcus_proteolyticus_MRP 2 2
Deinococcus_radiodurans_R1 8 8
Oceanithermus_profundus_DSM_14977 1 1
Meiothermus_silvanus_DSM_9946 1 1
Meiothermus_ruber_DSM_1279 1 1
Symbiobacterium_thermophilum_IAM_14863 2 2
Clostridium_clariflavum_DSM_19732 3 2
Clostridium_cellulolyticum_H10 2 2
Clostridium_thermocellum_ATCC_27405 1 1
Faecalibacterium_prausnitzii 1 1
Sulfobacillus_acidophilus_DSM_10332 2 2
Candidatus_Desulforudis_audaxviator_MP104C 1 1
Pelotomaculum_thermopropionicum_SI 1 1
Desulfosporosinus_acidiphilus_SJ4 2 2
Desulfosporosinus_orientis_DSM_765 2 2
Desulfitobacterium_hafniense_Y51 1 1
Desulfitobacterium_dehalogenans_ATCC_51507 2 2
Desulfotomaculum_acetoxidans_DSM_771 1 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Desulfotomaculum_ruminis_DSM_2154 1 1
Eubacterium_eligens_ATCC_27750 2 2
Clostridium_lentocellum_DSM_5427 1 1
Butyrivibrio_proteoclasticus_B316 1 1
Clostridium_sp._BNL1100 2 2
Clostridium_novyi_NT 1 1
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_botulinum_A_str._ATCC_3502 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Caldicellulosiruptor_obsidiansis_OB47 1 1
Caldicellulosiruptor_kristjanssonii_177R1B 1 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 2 2
Thermodesulfobium_narugense_DSM_14796 1 1
Halothermothrix_orenii_H_168 1 1
Halanaerobium_hydrogeniformans 1 1
Halanaerobium_praevalens_DSM_2228 1 1
Aerococcus_urinae_ACS-120-V-Col10a 1 1
Lactobacillus_kefiranofaciens_ZW3 1 1
Streptococcus_pyogenes_str._Manfredo 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_DSM_446 1 1
Paenibacillus_sp._JDR-2 1 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_polymyxa_M1 2 2
Listeria_ivanovii_subsp._ivanovii_PAM_55 1 1
Lysinibacillus_sphaericus_C3-41 1 1
Geobacillus_kaustophilus_HTA426 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_atrophaeus_1942 1 1
Bacillus_clausii_KSM-K16 2 2
Candidatus_Cloacamonas_acidaminovorans 3 3
Gemmatimonas_aurantiaca_T-27 3 3
Melioribacter_roseus_P3M 1 1
Ignavibacterium_album_JCM_16511 2 2
Chlorobium_chlorochromatii_CaD3 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Haliscomenobacter_hydrossis_DSM_1100 7 7
Niastella_koreensis_GR20-10 10 10
Chitinophaga_pinensis_DSM_2588 3 3
Rhodothermus_marinus_DSM_4252 1 1
Flexibacter_litoralis_DSM_6794 2 2
Belliella_baltica_DSM_15883 6 6
Cyclobacterium_marinum_DSM_745 8 8
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 2 2
Leadbetterella_byssophila_DSM_17132 3 3
Dyadobacter_fermentans_DSM_18053 8 8
Cytophaga_hutchinsonii_ATCC_33406 2 2
Spirosoma_linguale_DSM_74 4 4
Runella_slithyformis_DSM_19594 2 2
Parabacteroides_distasonis_ATCC_8503 6 6
Tannerella_forsythia_ATCC_43037 6 6
Paludibacter_propionicigenes_WB4 2 2
Odoribacter_splanchnicus_DSM_20712 12 12
Bacteroides_sp._CF50 4 4
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_intermedia_17 1 1
Prevotella_denticola_F0289 2 2
Porphyromonas_asaccharolytica_DSM_20707 1 1
Porphyromonas_gingivalis_ATCC_33277 3 3
Alistipes_finegoldii_DSM_17242 2 2
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_helcogenes_P_36-108 2 2
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 3 3
Bacteroides_fragilis_YCH46 11 11
Pedobacter_saltans_DSM_12145 4 4
Solitalea_canadensis_DSM_3403 1 1
Pedobacter_heparinus_DSM_2366 3 3
Sphingobacterium_sp._21 4 4
Fluviicola_taffensis_DSM_16823 5 5
Owenweeksia_hongkongensis_DSM_17368 1 1
Zunongwangia_profunda_SM-A87 3 3
Krokinobacter_sp._4H-3-7-5 2 2
Gramella_forsetii_KT0803 2 2
Lacinutrix_sp._5H-3-7-4 2 2
Maribacter_sp._HTCC2170 2 2
Robiginitalea_biformata_HTCC2501 2 2
Croceibacter_atlanticus_HTCC2559 2 2
Aequorivita_sublithincola_DSM_14238 3 2
Zobellia_galactanivorans 2 2
Muricauda_ruestringensis_DSM_13258 2 2
Cellulophaga_algicola_DSM_14237 3 3
Cellulophaga_lytica_DSM_7489 3 3
Polaribacter_sp._MED152 2 2
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Capnocytophaga_ochracea_DSM_7271 1 1
Weeksella_virosa_DSM_16922 1 1
Flavobacterium_indicum_GPTSA100-9 1 1
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 2 2
Flavobacterium_columnare_ATCC_49512 1 1
Flavobacterium_johnsoniae_UW101 3 3
Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2
Candidatus_Protochlamydia_amoebophila_UWE25 2 2
Simkania_negevensis_Z 1 1
Phycisphaera_mikurensis_NBRC_102666 3 3
Isosphaera_pallida_ATCC_43644 3 3
Planctomyces_brasiliensis_DSM_5305 1 1
Planctomyces_limnophilus_DSM_3776 3 3
Rhodopirellula_baltica_SH_1 6 5
Pirellula_staleyi_DSM_6068 5 5
Methylacidiphilum_infernorum_V4 1 1
Opitutus_terrae_PB90-1 2 2
Fretibacterium_fastidiosum 1 1
Thermovirga_lienii_DSM_17291 1 1
Thermanaerovibrio_acidaminovorans_DSM_6589 1 1
Turneriella_parva_DSM_21527 3 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Brachyspira_murdochii_DSM_12563 1 1
Spirochaeta_smaragdinae_DSM_11293 1 1
Sphaerochaeta_pleomorpha_str._Grapes 1 1
Treponema_azotonutricium_ZAS-9 1 1
Treponema_brennaborense_DSM_12168 1 1
Treponema_succinifaciens_DSM_2489 1 1
Treponema_pallidum_subsp._pallidum_SS14 2 2
Treponema_denticola_ATCC_35405 1 1
Spirochaeta_africana_DSM_8902 2 1
Thermodesulfatator_indicus_DSM_15286 1 1
Calditerrivibrio_nitroreducens_DSM_19672 1 1
Marinitoga_piezophila_KA3 6 6
Mesotoga_prima_MesG1.Ag.4.2 3 3
Kosmotoga_olearia_TBF_19.5.1 1 1
Fervidobacterium_pennivorans_DSM_9078 2 2
Fervidobacterium_nodosum_Rt17-B1 2 2
Thermosipho_melanesiensis_BI429 1 1
Thermosipho_africanus_TCF52B 2 2
Thermotoga_thermarum_DSM_5069 1 1
Thermotoga_sp._RQ2 2 2
Thermotoga_neapolitana_DSM_4359 2 2
Thermotoga_maritima_MSB8 1 1
Aquifex_aeolicus_VF5 1 1
Candidatus_Solibacter_usitatus_Ellin6076 13 13
Granulicella_tundricola_MP5ACTX9 2 2
Granulicella_mallensis_MP5ACTX8 6 6
Candidatus_Koribacter_versatilis_Ellin345 8 7
Terriglobus_saanensis_SP1PR4 2 2
Terriglobus_roseus_DSM_18391 7 6
Acidobacterium_capsulatum_ATCC_51196 4 4
Candidatus_Nitrospira_defluvii 1 1
Leptospirillum_ferrooxidans_C2-3 1 1
Sebaldella_termitidis_ATCC_33386 1 1
Candidatus_Methylomirabilis_oxyfera 3 3
Bdellovibrio_bacteriovorus_HD100 2 2
Nautilia_profundicola_AmH 1 1
Nitratifractor_salsuginis_DSM_16511 1 1
Arcobacter_sp._L 1 1
Arcobacter_butzleri_RM4018 1 1
uncultured_Sulfuricurvum_sp._RIFRC-1 1 1
Helicobacter_cinaedi_PAGU611 1 1
Desulfomonile_tiedjei_DSM_6799 1 1
Syntrophobacter_fumaroxidans_MPOB 2 2
Desulfurivibrio_alkaliphilus_AHT2 2 2
Desulfotalea_psychrophila_LSv54 1 1
Desulfobulbus_propionicus_DSM_2032 1 1
Desulfatibacillum_alkenivorans_AK-01 6 6
Desulfohalobium_retbaense_DSM_5692 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Desulfovibrio_magneticus_RS-1 1 1
Desulfovibrio_salexigens_DSM_2638 1 1
Desulfovibrio_africanus_str._Walvis_Bay 2 2
Hippea_maritima_DSM_10411 1 1
Geobacter_daltonii_FRC-32 1 1
Geobacter_metallireducens_GS-15 1 1
Pelobacter_propionicus_DSM_2379 1 1
Haliangium_ochraceum_DSM_14365 10 10
Sorangium_cellulosum_'So_ce_56' 20 19
Anaeromyxobacter_sp._Fw109-5 4 2
Anaeromyxobacter_dehalogenans_2CP-1 1 1
Stigmatella_aurantiaca_DW4/3-1 5 5
Corallococcus_coralloides_DSM_2259 11 10
Myxococcus_xanthus_DK_1622 5 5
Myxococcus_fulvus_HW-1 4 4
Thauera_sp._MZ1T 3 3
Azoarcus_sp._KH32C 1 1
Azoarcus_sp._BH72 3 3
Aromatoleum_aromaticum_EbN1 2 2
Pseudogulbenkiania_sp._NH8B 1 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 2 2
Thiomonas_arsenitoxydans 1 1
Thiomonas_intermedia_K12 1 1
Rubrivivax_gelatinosus_IL144 1 1
Leptothrix_cholodnii_SP-6 1 1
Burkholderia_phytofirmans_PsJN 2 2
Burkholderia_phymatum_STM815 2 2
Burkholderia_xenovorans_LB400 2 2
Ralstonia_eutropha_JMP134 2 2
Cupriavidus_metallidurans_CH34 2 2
Ralstonia_pickettii_12D 1 1
Burkholderia_sp._RPE64 2 2
Burkholderia_sp._CCGE1002 2 2
Burkholderia_pseudomallei_1106a 1 1
Burkholderia_ambifaria_AMMD 4 4
Burkholderia_cenocepacia_HI2424 3 3
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_vietnamiensis_G4 1 1
Burkholderia_gladioli_BSR3 1 1
Ramlibacter_tataouinensis_TTB310 2 2
Delftia_sp._Cs1-4 4 4
Delftia_acidovorans_SPH-1 3 3
Polaromonas_sp._JS666 1 1
Polaromonas_naphthalenivorans_CJ2 2 2
Variovorax_paradoxus_S110 1 1
Acidovorax_ebreus_TPSY 1 1
Acidovorax_sp._KKS102 1 1
Acidovorax_sp._JS42 1 1
Acidovorax_citrulli_AAC00-1 1 1
Acidovorax_avenae_subsp._avenae_ATCC_19860 1 1
Comamonas_testosteroni_CNB-2 1 1
Collimonas_fungivorans_Ter331 2 2
Pusillimonas_sp._T7-7 1 1
Advenella_kashmirensis_WT001 2 2
Taylorella_asinigenitalis_MCE3 2 2
Taylorella_equigenitalis_MCE9 2 2
Bordetella_petrii_DSM_12804 1 1
Bordetella_pertussis_Tohama_I 1 1
Bordetella_parapertussis_12822 3 3
Bordetella_bronchiseptica_RB50 4 4
Achromobacter_xylosoxidans_A8 2 2
Achromobacter_xylosoxidans 3 3
Nitrosospira_multiformis_ATCC_25196 1 1
Nitrosomonas_sp._Is79A3 1 1
Methylotenera_versatilis_301 1 1
Methylotenera_mobilis_JLW8 1 1
Methylovorus_glucosetrophus_SIP3-4 1 1
Methylobacillus_flagellatus_KT 1 1
Asticcacaulis_excentricus_CB_48 1 1
Brevundimonas_subvibrioides_ATCC_15264 2 2
Caulobacter_sp._K31 2 2
Caulobacter_crescentus_NA1000 1 1
Caulobacter_segnis_ATCC_21756 5 5
Phenylobacterium_zucineum_HLK1 1 1
Sphingopyxis_alaskensis_RB2256 1 1
Novosphingobium_sp._PP1Y 1 1
Novosphingobium_aromaticivorans_DSM_12444 3 3
Sphingobium_sp._SYK-6 1 1
Sphingobium_japonicum_UT26S 1 1
Sphingobium_chlorophenolicum_L-1 1 1
Sphingomonas_sp._MM-1 2 2
Sphingomonas_wittichii_RW1 3 3
Zymomonas_mobilis_subsp._mobilis_NCIMB_11163 1 1
Maricaulis_maris_MCS10 1 1
Hirschia_baltica_ATCC_49814 2 2
Hyphomonas_neptunium_ATCC_15444 1 1
Dinoroseobacter_shibae_DFL_12 3 3
Phaeobacter_gallaeciensis_2.10 3 3
Jannaschia_sp._CCS1 2 2
Ruegeria_sp._TM1040 4 4
Ruegeria_pomeroyi_DSS-3 2 2
Ketogulonicigenium_vulgare_Y25 1 1
Ketogulonigenium_vulgarum_WSH-001 1 1
Roseobacter_litoralis_Och_149 1 1
Rhodobacter_sphaeroides_ATCC_17029 2 2
Paracoccus_denitrificans_PD1222 5 5
Tistrella_mobilis_KA081020-065 4 4
Rhodospirillum_rubrum_F11 1 1
Azospirillum_lipoferum_4B 2 2
Azospirillum_sp._B510 1 1
Azospirillum_brasilense_Sp245 2 2
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Acidiphilium_multivorum_AIU301 1 1
Acidiphilium_cryptum_JF-5 1 1
Acetobacter_pasteurianus_IFO_3283-01 1 1
Polymorphum_gilvum_SL003B-26A1 3 3
Micavibrio_aeruginosavorus_ARL-13 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 2 2
Candidatus_Pelagibacter_sp._IMCC9063 1 1
Starkeya_novella_DSM_506 1 1
Xanthobacter_autotrophicus_Py2 1 1
Azorhizobium_caulinodans_ORS_571 1 1
Methylobacterium_chloromethanicum_CM4 2 2
Methylobacterium_extorquens_AM1 1 1
Methylobacterium_sp._4-46 2 2
Methylobacterium_populi_BJ001 1 1
Methylobacterium_nodulans_ORS_2060 1 1
Ochrobactrum_anthropi_ATCC_49188 2 2
Brucella_microti_CCM_4915 1 1
Brucella_pinnipedialis_B2/94 1 1
Brucella_canis_ATCC_23365 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 1 1
Sinorhizobium_medicae_WSM419 2 2
Sinorhizobium_meliloti_AK83 1 1
Genome_sequence_of_Rhizobium_sp._strain_IRBG74 3 3
Rhizobium_etli_CIAT_652 2 2
Agrobacterium_tumefaciens_str._C58 3 3
Agrobacterium_sp._H13-3 3 3
Agrobacterium_vitis_S4 3 3
Mesorhizobium_sp._BNC1 3 3
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 2 2
Mesorhizobium_loti_MAFF303099 1 1
Pelagibacterium_halotolerans_B2 4 4
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Nitrobacter_hamburgensis_X14 1 1
Bradyrhizobium_sp._ORS_278 3 3
Methylocystis_sp._SC2 1 1
Saccharophagus_degradans_2-40 5 4
Teredinibacter_turnerae_T7901 4 4
Cellvibrio_japonicus_Ueda107 4 3
Oceanimonas_sp._GK1 1 1
Aeromonas_veronii_B565 1 1
Vibrio_sp._Ex25 1 1
Vibrio_harveyi_ATCC_BAA-1116 1 1
Vibrio_parahaemolyticus_RIMD_2210633 1 1
Vibrio_splendidus_LGP32 1 1
Vibrio_furnissii_NCTC_11218 2 2
Vibrio_vulnificus_MO6-24/O 2 2
Vibrio_cholerae_O395 2 2
Ferrimonas_balearica_DSM_9799 2 2
Shewanella_loihica_PV-4 2 2
Shewanella_sediminis_HAW-EB3 1 1
Shewanella_denitrificans_OS217 1 1
Shewanella_pealeana_ATCC_700345 2 2
Shewanella_oneidensis_MR-1 1 1
Shewanella_baltica_OS185 1 1
Shewanella_woodyi_ATCC_51908 2 2
Shewanella_sp._MR-4 1 1
Shewanella_amazonensis_SB2B 1 1
Shewanella_violacea_DSS12 1 1
Shewanella_putrefaciens_CN-32 1 1
Colwellia_psychrerythraea_34H 1 1
Pseudoalteromonas_atlantica_T6c 2 2
Glaciecola_sp._4H-3-7+YE-5 3 3
Marinobacter_adhaerens_HP15 1 1
Marinobacter_hydrocarbonoclasticus_ATCC_49840 2 2
Marinobacter_aquaeolei_VT8 1 1
Alteromonas_sp._SN2 2 2
Hahella_chejuensis_KCTC_2396 1 1
Alcanivorax_borkumensis_SK2 2 2
Marinomonas_mediterranea_MMB-1 2 2
Halomonas_elongata_DSM_2581 3 3
Methylomicrobium_alcaliphilum 2 1
Methylomonas_methanica_MC09 2 1
Methylococcus_capsulatus_str._Bath 1 1
Rhodanobacter_denitrificans 3 3
Frateuria_aurantia_DSM_6220 1 1
Stenotrophomonas_maltophilia_K279a 1 1
Xanthomonas_axonopodis_pv._citri_str._306 2 2
Xanthomonas_oryzae_pv._oryzae_PXO99A 1 1
Xanthomonas_campestris_pv._campestris_str._B100 2 2
Halothiobacillus_neapolitanus_c2 1 1
Thioalkalivibrio_sp._K90mix 2 2
Allochromatium_vinosum_DSM_180 1 1
Thiocystis_violascens_DSM_198 2 2
Nitrosococcus_watsonii_C-113 3 3
Nitrosococcus_halophilus_Nc4 3 3
Nitrosococcus_oceani_ATCC_19707 2 2
gamma_proteobacterium_HdN1 1 1
Photorhabdus_asymbiotica 1 1
Photorhabdus_luminescens_subsp._laumondii_TTO1 1 1
Rahnella_sp._Y9602 1 1
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 2 2
Yersinia_pseudotuberculosis_IP_31758 1 1
Yersinia_pestis_Pestoides_F 1 1
Serratia_sp._AS12 2 2
Serratia_plymuthica_AS9 2 2
Serratia_proteamaculans_568 2 2
Dickeya_dadantii_Ech703 2 2
Dickeya_zeae_Ech1591 4 4
Pectobacterium_wasabiae_WPP163 3 2
Pectobacterium_sp._SCC3193 4 2
Pectobacterium_atrosepticum_SCRI1043 4 3
Pectobacterium_carotovorum_subsp._carotovorum_PC1 3 3
Pantoea_sp._At-9b 2 2
Pantoea_vagans_C9-1 1 1
Pantoea_ananatis_LMG_20103 1 1
Erwinia_tasmaniensis_Et1/99 1 1
Erwinia_sp._Ejp617 1 1
Erwinia_billingiae_Eb661 1 1
Erwinia_pyrifoliae_Ep1/96 1 1
Erwinia_amylovora_ATCC_49946 2 2
Cronobacter_turicensis_z3032 1 1
Cronobacter_sakazakii_ES15 1 1
Shigella_flexneri_5_str._8401 1 1
Klebsiella_oxytoca_E718 1 1
Klebsiella_variicola_At-22 1 1
Klebsiella_pneumoniae_NTUH-K2044 1 1
Enterobacter_sp._R4-368 1 1
Enterobacter_sp._638 1 1
Enterobacter_asburiae_LF7a 1 1
Enterobacter_cloacae_subsp._dissolvens_SDM 1 1
Citrobacter_rodentium_ICC168 1 1
Citrobacter_koseri_ATCC_BAA-895 1 1
Azotobacter_vinelandii_DJ 1 1
Pseudomonas_sp._TKP 1 1
Pseudomonas_sp._UW4 2 2
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 1 1
Pseudomonas_entomophila_L48 3 3
Pseudomonas_syringae_pv._tomato_str._DC3000 2 2
Pseudomonas_stutzeri_A1501 1 1
Pseudomonas_fulva_12-X 2 2
Pseudomonas_putida_F1 3 3
Pseudomonas_protegens_Pf-5 4 4
Pseudomonas_fluorescens_SBW25 1 1
Pseudomonas_mendocina_ymp 2 2
Pseudomonas_aeruginosa_UCBPP-PA14 1 1
Pseudomonas_sp._VLB120 2 2
Psychrobacter_sp._G 1 1
Psychrobacter_arcticus_273-4 1 1
Psychrobacter_cryohalolentis_K5 1 1
Moraxella_catarrhalis_RH4 1 1
Francisella_cf._novicida_3523 1 1
Candidatus_Caldiarchaeum_subterraneum 1 1
Cenarchaeum_symbiosum_A 32 18
Pyrolobus_fumarii_1A 2 2
Ignisphaera_aggregans_DSM_17230 5 5
Ignicoccus_hospitalis_KIN4/I 2 2
Thermosphaera_aggregans_DSM_11486 1 1
Metallosphaera_cuprina_Ar-4 1 1
Metallosphaera_sedula_DSM_5348 2 2
Sulfolobus_tokodaii_str._7 2 2
Sulfolobus_islandicus_Y.N.15.51 1 1
Sulfolobus_solfataricus_P2 1 1
Thermofilum_sp._1910b 1 1
Thermofilum_pendens_Hrk_5 1 1
Pyrobaculum_sp._1860 4 4
Pyrobaculum_calidifontis_JCM_11548 1 1
Pyrobaculum_aerophilum_str._IM2 2 2
Thermoproteus_uzoniensis_768-20 1 1
Methanocella_arvoryzae_MRE50 3 3
Methanocella_paludicola_SANAE 1 1
Methanosaeta_harundinacea_6Ac 1 1
Methanosaeta_concilii_GP6 1 1
Methanosarcina_acetivorans_C2A 5 5
Methanosarcina_mazei_Go1 1 1
Methanosarcina_barkeri_str._Fusaro 4 3
Methanospirillum_hungatei_JF-1 1 1
Methanoplanus_petrolearius_DSM_11571 2 2
Methanoculleus_marisnigri_JR1 1 1
Thermococcus_barophilus_MP 1 1
Natrinema_sp._J7-2 1 1
Haloquadratum_walsbyi_DSM_16790 1 1
Halogeometricum_borinquense_DSM_11551 1 1
Haloferax_mediterranei_ATCC_33500 1 1
Haloferax_volcanii_DS2 1 1
Halomicrobium_mukohataei_DSM_12286 1 1
Haloarcula_hispanica_ATCC_33960 1 1
Haloarcula_marismortui_ATCC_43049 2 2
Methanocaldococcus_jannaschii_DSM_2661 1 1

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   13 13
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   7 7
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   2 2
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   4 4
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   4 4
Cryptococcus_neoformans_var._grubii_H99_ 2 2
Cryptococcus_neoformans_B-3501A_ 4 4
Cryptococcus_neoformans_JEC21_ 2 2
Paracoccidioides_brasiliensis_Pb01_ 2 2
Paracoccidioides_brasiliensis_Pb03_ 4 4
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 1 1
Coccidioides_immitis_RMSCC_2394_ 2 2
Coccidioides_immitis_H538.4_ 2 2
Ajellomyces_dermatitidis_ER-3_ 5 5
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 5 5
Histoplasma_capsulatum_G186AR 4 4
Aspergillus_fumigatus_A1163_ 6 6
Candida_albicans_WO-1_ 2 2
Saccharomyces_cerevisiae_UC5 2 2
Saccharomyces_cerevisiae_PW5 2 2
Saccharomyces_cerevisiae_FL100 1 1
Saccharomyces_cerevisiae_CLIB324 1 1
Saccharomyces_cerevisiae_CBS7960 3 3
Saccharomyces_cerevisiae_YJM269 2 2
Saccharomyces_cerevisiae_T7 3 3
Saccharomyces_cerevisiae_FostersB 3 3
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 2 2
Saccharomyces_cerevisiae_Vin13 2 2
Saccharomyces_cerevisiae_LalvinQA23 3 3
Saccharomyces_cerevisiae_AWRI796 1 1
Saccharomyces_cerevisiae_Sigma1278b 3 3
Saccharomyces_cerevisiae_W303 3 3
Saccharomyces_cerevisiae_JAY291 3 3
Saccharomyces_cerevisiae_AWRI1631 3 3
Saccharomyces_cerevisiae_T73 1 1
Saccharomyces_cerevisiae_CLIB215 3 3
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 4 4
Saccharomyces_cerevisiae_YJM789 4 4
Saccharomyces_cerevisiae_RM11-1a 4 4
Saccharomyces_cerevisiae_RM11-1a_ 4 4
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   3 3
Schizosaccharomyces_pombe_972h-_ 3 3
Batrachochytrium_dendrobatidis_JEL423_ 3 3
Batrachochytrium_dendrobatidis_JAM81_ 5 4
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   5 5
Hordeum_vulgare_22   (Domesticated barley)   17 17
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   15 15
Trypanosoma_brucei_Lister_427_v4.1 4 4
Neospora_caninum_Nc-Liverpool_6.2 1 1
Plasmodium_falciparum_HB3_ 1 1
Chamaesiphon_minutus_PCC_6605 6 6
Synechocystis_sp._PCC_6803_substr._PCC-P 3 3
Synechocystis_sp._PCC_6803_substr._PCC-N 3 3
Synechocystis_sp._PCC_6803_substr._GT-I 3 3
Synechocystis_sp._PCC_6803 3 3
Synechococcus_sp._JA-2-3B'a(2-13) 1 1
Synechococcus_sp._JA-3-3Ab 1 1
Synechococcus_sp._PCC_7002 1 1
Prochlorococcus_marinus_str._NATL1A 1 1
Prochlorococcus_marinus_str._NATL2A 1 1
Crinalium_epipsammum_PCC_9333 2 2
Oscillatoria_nigro-viridis_PCC_7112 7 7
Oscillatoria_acuminata_PCC_6304 1 1
Arthrospira_platensis_NIES-39 1 1
Cyanothece_sp._PCC_7822 4 4
Cyanothece_sp._PCC_7425 2 2
Cyanothece_sp._PCC_7424 3 3
Cyanothece_sp._ATCC_51142 1 1
Cyanothece_sp._PCC_8801 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 1 1
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 2 2
Stanieria_cyanosphaera_PCC_7437 2 2
Calothrix_parietina_Calothrix_sp._PCC_6303 2 2
Cylindrospermum_stagnale_PCC_7417 4 4
Anabaena_cylindrica_PCC_7122 2 2
Candidatus_Phytoplasma_australiense_Strawberry_lethal_yellows_phytoplasma_(CPA)_str._NZSb11 3 3
Candidatus_Phytoplasma_australiense 1 1
Adlercreutzia_equolifaciens_DSM_19450 1 1
Frankia_sp._EuI1c 1 1
Nocardiopsis_alba_ATCC_BAA-2165 2 2
Streptomyces_albus_J1074 4 4
Streptomyces_rapamycinicus_NRRL_5491 2 2
Streptomyces_davawensis_JCM_4913 6 5
Streptomyces_fulvissimus_DSM_40593 3 3
Streptomyces_venezuelae_ATCC_10712 6 6
Streptomyces_collinus_Tu_365 1 1
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 2 2
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 6 6
Saccharothrix_espanaensis_DSM_44229 10 10
Amycolatopsis_mediterranei_RB 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_mediterranei_S699 1 1
Amycolatopsis_orientalis_HCCB10007 4 4
Propionibacterium_avidum_44067 1 1
Propionibacterium_acidipropionici_ATCC_4875 1 1
Actinoplanes_friuliensis_DSM_7358 5 5
Rhodococcus_pyridinivorans_SB3094 2 2
Rhodococcus_erythropolis_CCM2595 6 6
Nocardia_brasiliensis_ATCC_700358 5 5
Mycobacterium_sp._MOTT36Y 1 1
Mycobacterium_sp._JDM601 2 2
Mycobacterium_abscessus_subsp._bolletii_50594 1 1
Mycobacterium_liflandii_128FXT 2 2
Mycobacterium_sp._KMS 2 2
Mycobacterium_sp._MCS 2 2
Mycobacterium_yongonense_05-1390 1 1
Mycobacterium_indicus_pranii_MTCC_9506 1 1
Mycobacterium_intracellulare_MOTT-02 1 1
Mycobacterium_gilvum_Spyr1 6 6
Mycobacterium_smegmatis_str._MC2_155 3 3
Mycobacterium_kansasii_ATCC_12478 2 2
Corynebacterium_maris_DSM_45190 1 1
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 1 1
Corynebacterium_terpenotabidum_Y-11 1 1
Corynebacterium_ulcerans_BR-AD22 1 1
Corynebacterium_ulcerans_809 1 1
Corynebacterium_argentoratense_DSM_44202 1 1
Corynebacterium_callunae_DSM_20147 2 2
Corynebacterium_pseudotuberculosis_258 1 1
Corynebacterium_pseudotuberculosis_Cp162 1 1
Corynebacterium_pseudotuberculosis_P54B96 1 1
Corynebacterium_pseudotuberculosis_267 1 1
Corynebacterium_pseudotuberculosis_1/06-A 1 1
Corynebacterium_pseudotuberculosis_42/02-A 1 1
Corynebacterium_pseudotuberculosis_3/99-5 1 1
Corynebacterium_pseudotuberculosis_31 2 2
Corynebacterium_pseudotuberculosis_CIP_52.97 2 2
Corynebacterium_pseudotuberculosis_I19 1 1
Corynebacterium_pseudotuberculosis_FRC41 1 1
Corynebacterium_pseudotuberculosis_C231 1 1
Corynebacterium_pseudotuberculosis_1002 1 1
Corynebacterium_glutamicum_MB001 2 2
Corynebacterium_glutamicum_SCgG2 2 2
Corynebacterium_glutamicum_SCgG1 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_glutamicum_ATCC_13032 2 2
Corynebacterium_diphtheriae_BH8 1 1
Corynebacterium_diphtheriae_INCA_402 1 1
Corynebacterium_diphtheriae_VA01 2 2
Corynebacterium_diphtheriae_HC04 1 1
Corynebacterium_diphtheriae_HC03 1 1
Corynebacterium_diphtheriae_HC02 1 1
Corynebacterium_diphtheriae_HC01 1 1
Corynebacterium_diphtheriae_241 1 1
Corynebacterium_diphtheriae_CDCE_8392 1 1
Corynebacterium_diphtheriae_PW8 1 1
Corynebacterium_diphtheriae_C7_(beta) 1 1
Corynebacterium_diphtheriae_31A 1 1
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 1 1
Gardnerella_vaginalis_HMP9231 1 1
Actinomyces_viscosus_C505 1 1
Dehalococcoides_mccartyi_GY50 1 1
Dehalococcoides_mccartyi_DCMB5 1 1
Dehalococcoides_mccartyi_BTF08 1 1
Dehalococcoides_sp._GT 1 1
Dehalococcoides_sp._VS 1 1
Dehalococcoides_sp._CBDB1 1 1
Chthonomonas_calidirosea_T49 5 5
Deinococcus_peraridilitoris_DSM_19664 4 4
Thermus_oshimai_JL-2 2 2
Thermus_thermophilus_HB8 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Faecalibacterium_prausnitzii_L2-6 1 1
Sulfobacillus_acidophilus_TPY 2 2
Desulfosporosinus_meridiei_DSM_13257 1 1
Desulfitobacterium_dichloroeliminans_LMG_P-21439 1 1
Clostridium_difficile_BI1 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Candidatus_Arthromitus_sp._SFB-rat-Yit 1 1
Clostridium_sp._SY8519 2 2
Clostridium_pasteurianum_BC1 1 1
Clostridium_botulinum_H04402_065 1 1
Clostridium_botulinum_F_str._230613 1 1
Clostridium_botulinum_F_str._Langeland 1 1
Clostridium_botulinum_B1_str._Okra 1 1
Clostridium_botulinum_A2_str._Kyoto 1 1
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_botulinum_A_str._Hall 1 1
Clostridium_botulinum_A_str._ATCC_19397 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Thermoanaerobacterium_saccharolyticum_JW/SL-YS485 1 1
Thermoanaerobacterium_thermosaccharolyticum_M0795 1 1
Halobacteroides_halobius_DSM_5150 1 1
Enterococcus_faecium_NRRL_B-2354 2 2
Lactobacillus_helveticus_H10 1 1
Streptococcus_iniae_SF1 1 1
Streptococcus_pyogenes_HSC5 1 1
Streptococcus_pyogenes_A20 1 1
Streptococcus_pyogenes_MGAS1882 1 1
Streptococcus_pyogenes_MGAS15252 1 1
Streptococcus_pyogenes_Alab49 1 1
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS10270 1 1
Streptococcus_pyogenes_MGAS2096 1 1
Streptococcus_pyogenes_MGAS9429 1 1
Streptococcus_pyogenes_MGAS6180 1 1
Streptococcus_pyogenes_NZ131 1 1
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pyogenes_MGAS10394 1 1
Streptococcus_pyogenes_MGAS315 1 1
Streptococcus_pyogenes_SSI-1 1 1
Streptococcus_pyogenes_M1_476 1 1
Streptococcus_pyogenes_MGAS5005 1 1
Streptococcus_pyogenes_M1_GAS 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_D12 1 1
Alicyclobacillus_acidocaldarius_subsp._acidocaldarius_Tc-4-1 3 3
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 3 3
Paenibacillus_mucilaginosus_KNP414 2 1
Paenibacillus_mucilaginosus_K02 3 2
Paenibacillus_larvae_subsp._larvae_DSM_25430 1 1
Paenibacillus_polymyxa_CR1 2 2
Paenibacillus_polymyxa_SC2 2 2
Geobacillus_sp._C56-T3 1 1
Geobacillus_sp._Y412MC52 2 2
Geobacillus_sp._Y412MC61 2 2
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_XH7 1 1
Bacillus_amyloliquefaciens_LL3 1 1
Bacillus_amyloliquefaciens_TA208 1 1
Bacillus_infantis_NRRL_B-14911 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_cereus_AH187 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_NC7401 1 1
Bacillus_cereus_ATCC_10987 1 1
Chlorobium_phaeobacteroides_BS1 1 1
Echinicola_vietnamensis_DSM_17526 4 4
Emticicia_oligotrophica_DSM_17448 1 1
Prevotella_sp._oral_taxon_299_str._F0039 2 2
Prevotella_dentalis_DSM_3688 2 2
Porphyromonas_gingivalis_TDC60 3 3
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 1 1
Bacteroides_fragilis_638R 11 11
Bacteroides_fragilis_NCTC_9343 10 10
Nonlabens_dokdonensis_DSW-6 5 5
Psychroflexus_torquis_ATCC_700755 3 3
Riemerella_anatipestifer_RA-CH-2 1 1
Riemerella_anatipestifer_RA-CH-1 3 3
Riemerella_anatipestifer_RA-GD 1 1
Riemerella_anatipestifer_ATCC_11845_=_DSM_15868 1 1
Fibrobacter_succinogenes_subsp._succinogenes_S85 2 2
Singulisphaera_acidiphila_DSM_18658 13 12
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 1 1
Treponema_pedis_str._T_A4 3 3
Treponema_pallidum_str._Fribourg-Blanc 1 1
Treponema_pallidum_subsp._pertenue_str._Gauthier 1 1
Treponema_pallidum_subsp._pertenue_str._CDC2 1 1
Treponema_pallidum_subsp._pertenue_str._SamoaD 1 1
Treponema_pallidum_subsp._pallidum_str._Mexico_A 1 1
Treponema_pallidum_subsp._pallidum_str._Chicago 1 1
Treponema_pallidum_subsp._pallidum_DAL-1 1 1
Treponema_pallidum_subsp._pallidum_str._Nichols 1 1
Thermotoga_maritima_MSB8 1 1
Leptospirillum_ferriphilum_ML-04 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 1 1
Arcobacter_butzleri_7h1h 1 1
Arcobacter_butzleri_ED-1 1 1
Desulfocapsa_sulfexigens_DSM_10523 2 2
Desulfobacula_toluolica_Tol2 3 3
Desulfovibrio_gigas_DSM_1382_=_ATCC_19364 3 3
Desulfovibrio_desulfuricans_ND132 1 1
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 1 1
Sorangium_cellulosum_So0157-2 15 15
Anaeromyxobacter_sp._K 2 2
Anaeromyxobacter_dehalogenans_2CP-C 4 4
Myxococcus_stipitatus_DSM_14675 8 8
Pandoraea_pnomenusa_3kgm 1 1
Ralstonia_pickettii_12J 1 1
Burkholderia_sp._YI23 3 3
Burkholderia_sp._CCGE1003 4 4
Burkholderia_sp._CCGE1001 2 2
Burkholderia_sp._KJ006 1 1
Burkholderia_thailandensis_MSMB121 2 2
Burkholderia_pseudomallei_BPC006 1 1
Burkholderia_pseudomallei_1710b 1 1
Burkholderia_lata 3 3
Burkholderia_ambifaria_MC40-6 2 2
Burkholderia_cenocepacia_MC0-3 3 3
Burkholderia_cenocepacia_AU_1054 3 3
Burkholderia_cenocepacia_J2315 3 3
Burkholderia_multivorans_ATCC_17616 1 1
Burkholderia_cepacia_GG4 2 2
Variovorax_paradoxus_B4 2 2
Variovorax_paradoxus_EPS 2 2
Taylorella_asinigenitalis_14/45 1 1
Taylorella_equigenitalis_14/56 2 2
Taylorella_equigenitalis_ATCC_35865 2 2
Bordetella_pertussis_CS 1 1
Bordetella_parapertussis_18323 1 1
Bordetella_parapertussis_Bpp5 2 2
Bordetella_bronchiseptica_MO149 3 3
Bordetella_bronchiseptica_253 5 4
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 3 3
Caulobacter_crescentus_CB15 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_29191 1 1
Zymomonas_mobilis_subsp._mobilis_CP4 1 1
Zymomonas_mobilis_subsp._mobilis_ATCC_10988 1 1
Zymomonas_mobilis_subsp._mobilis_ZM4 1 1
Zymomonas_mobilis_subsp._pomaceae_ATCC_29192 1 1
Phaeobacter_gallaeciensis_DSM_17395 4 4
Phaeobacter_gallaeciensis_DSM_26640 4 4
Leisingera_methylohalidivorans_DSM_14336 2 2
Octadecabacter_antarcticus_307 2 2
Octadecabacter_arcticus_238 1 1
Rhodobacter_sphaeroides_KD131 1 1
Rhodobacter_sphaeroides_ATCC_17025 2 2
Rhodobacter_sphaeroides_2.4.1 1 1
Paracoccus_aminophilus_JCM_7686 1 1
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Rhodospirillum_rubrum_ATCC_11170 1 1
Gluconacetobacter_diazotrophicus_PAl_5 2 2
Acetobacter_pasteurianus_386B 1 1
Acetobacter_pasteurianus_IFO_3283-12 1 1
Acetobacter_pasteurianus_IFO_3283-01-42C 1 1
Acetobacter_pasteurianus_IFO_3283-32 1 1
Acetobacter_pasteurianus_IFO_3283-26 1 1
Acetobacter_pasteurianus_IFO_3283-22 1 1
Acetobacter_pasteurianus_IFO_3283-07 1 1
Acetobacter_pasteurianus_IFO_3283-03 1 1
Micavibrio_aeruginosavorus_EPB 7 5
Orientia_tsutsugamushi_str._Ikeda 1 1
Methylobacterium_extorquens_DM4 1 1
Methylobacterium_extorquens_PA1 1 1
Brucella_ceti_TE10759-12 1 1
Brucella_ceti_TE28753-12 1 1
Brucella_canis_HSK_A52141 1 1
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 1 1
Brucella_melitensis_M5-90 1 1
Brucella_melitensis_M28 1 1
Brucella_melitensis_bv._1_str._16M 1 1
Brucella_abortus_A13334 1 1
Brucella_melitensis_biovar_Abortus_2308 1 1
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 3 3
Sinorhizobium_fredii_HH103 1 1
Sinorhizobium_meliloti_GR4 1 1
Sinorhizobium_meliloti_Rm41 2 2
Sinorhizobium_meliloti_SM11 2 2
Sinorhizobium_meliloti_BL225C 1 1
Rhizobium_etli_CFN_42 1 1
Rhizobium_etli_bv._mimosae_str._Mim1 1 1
Rhizobium_tropici_CIAT_899 1 1
Rhizobium_leguminosarum_bv._trifolii_WSM2304 2 2
Hyphomicrobium_nitrativorans_NL23 2 2
Hyphomicrobium_denitrificans_1NES1 1 1
Rhodopseudomonas_palustris_TIE-1 1 1
Rhodopseudomonas_palustris_BisB5 1 1
Rhodopseudomonas_palustris_CGA009 1 1
Bradyrhizobium_sp._S23321 1 1
Bradyrhizobium_oligotrophicum_S58 1 1
Bradyrhizobium_japonicum_USDA_6 1 1
Aeromonas_hydrophila_ML09-119 1 1
Vibrio_sp._EJY3 1 1
Vibrio_parahaemolyticus_BB22OP 2 2
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 1 1
Vibrio_nigripulchritudo_VibrioScope 4 4
Vibrio_vulnificus_CMCP6 2 2
Vibrio_vulnificus_YJ016 2 2
Vibrio_cholerae_LMA3984-4 3 3
Vibrio_cholerae_M66-2 2 2
Vibrio_cholerae_O395 2 2
Vibrio_cholerae_IEC224 2 2
Vibrio_cholerae_O1_str._2010EL-1786 2 2
Vibrio_cholerae_MJ-1236 2 2
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 2 2
Shewanella_sp._W3-18-1 1 1
Shewanella_sp._ANA-3 1 1
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 1 1
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 1 1
Shewanella_sp._MR-7 1 1
Shewanella_putrefaciens_200 1 1
Glaciecola_psychrophila_170 2 2
Alteromonas_macleodii_str._'English_Channel_673' 2 2
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 1 1
Alteromonas_macleodii_ATCC_27126 1 1
Alcanivorax_dieselolei_B5 5 5
Thalassolituus_oleivorans_MIL-1 2 2
Stenotrophomonas_maltophilia_D457 1 1
Stenotrophomonas_maltophilia_JV3 1 1
Xanthomonas_citri_subsp._citri_Aw12879 2 2
Xanthomonas_campestris_pv._vesicatoria_str._85-10 2 2
Xanthomonas_axonopodis_pv._citrumelo_F1 3 3
Xanthomonas_axonopodis_Xac29-1 2 2
Xanthomonas_oryzae_pv._oryzicola_BLS256 1 1
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 1 1
Xanthomonas_oryzae_pv._oryzae_KACC_10331 1 1
Xanthomonas_campestris_pv._raphani_756C 2 2
Xanthomonas_campestris_pv._campestris_str._8004 2 2
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 2 2
Thioalkalivibrio_nitratireducens_DSM_14787 1 1
Thioflavicoccus_mobilis_8321 4 3
Rahnella_aquatilis_HX2 1 1
Yersinia_pseudotuberculosis_PB1/+ 1 1
Yersinia_pseudotuberculosis_YPIII 1 1
Yersinia_pseudotuberculosis_IP_32953 1 1
Yersinia_pestis_biovar_Microtus_str._91001 1 1
Yersinia_pestis_A1122 1 1
Yersinia_pestis_Z176003 1 1
Yersinia_pestis_D182038 1 1
Yersinia_pestis_D106004 1 1
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 1 1
Yersinia_pestis_Nepal516 1 1
Yersinia_pestis_Antiqua 1 1
Yersinia_pestis_Angola 1 1
Yersinia_pestis_CO92 1 1
Yersinia_pestis_KIM10+ 1 1
Serratia_sp._AS13 2 2
Serratia_plymuthica_S13 2 2
Serratia_plymuthica_4Rx13 1 1
Serratia_marcescens_FGI94 1 1
Serratia_marcescens_WW4 1 1
Serratia_liquefaciens_ATCC_27592 2 2
Dickeya_dadantii_3937 2 2
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 3 3
Pantoea_ananatis_LMG_5342 1 1
Pantoea_ananatis_PA13 1 1
Pantoea_ananatis_AJ13355 1 1
Erwinia_pyrifoliae_DSM_12163 1 1
Erwinia_amylovora_CFBP1430 2 2
Cronobacter_sakazakii_CMCC_45402 1 1
Cronobacter_sakazakii_SP291 1 1
Cronobacter_sakazakii_ATCC_BAA-894 1 1
Raoultella_ornithinolytica_B6 1 1
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 1 1
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 1 1
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 1 1
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 1 1
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 1 1
Klebsiella_oxytoca_KCTC_1686 1 1
Klebsiella_pneumoniae_JM45 1 1
Klebsiella_pneumoniae_CG43 1 1
Klebsiella_pneumoniae_KCTC_2242 1 1
Klebsiella_pneumoniae_342 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_1084 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 1 1
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 1 1
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 1 1
Enterobacter_cloacae_EcWSU1 1 1
Enterobacter_cloacae_subsp._cloacae_ENHKU01 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 1 1
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 1 1
Azotobacter_vinelandii_CA6 1 1
Azotobacter_vinelandii_CA 1 1
Pseudomonas_denitrificans_ATCC_13867 4 4
Pseudomonas_syringae_pv._phaseolicola_1448A 2 2
Pseudomonas_syringae_pv._syringae_B728a 1 1
Pseudomonas_stutzeri_CCUG_29243 1 1
Pseudomonas_stutzeri_DSM_10701 1 1
Pseudomonas_stutzeri_DSM_4166 1 1
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 1 1
Pseudomonas_monteilii_SB3101 3 3
Pseudomonas_monteilii_SB3078 3 3
Pseudomonas_putida_H8234 3 3
Pseudomonas_putida_HB3267 2 2
Pseudomonas_putida_NBRC_14164 3 3
Pseudomonas_putida_DOT-T1E 3 3
Pseudomonas_putida_S16 1 1
Pseudomonas_putida_BIRD-1 3 3
Pseudomonas_putida_W619 2 2
Pseudomonas_putida_ND6 3 3
Pseudomonas_putida_KT2440 3 3
Pseudomonas_putida_GB-1 4 4
Pseudomonas_protegens_CHA0 4 4
Pseudomonas_poae_RE*1-1-14 1 1
Pseudomonas_fluorescens_F113 1 1
Pseudomonas_fluorescens_A506 2 2
Pseudomonas_fluorescens_R124 2 2
Pseudomonas_fluorescens_Pf0-1 2 2
Pseudomonas_resinovorans_NBRC_106553 4 4
Pseudomonas_mendocina_NK-01 4 4
Pseudomonas_aeruginosa_SCV20265 1 1
Pseudomonas_aeruginosa_MTB-1 1 1
Pseudomonas_aeruginosa_LES431 1 1
Pseudomonas_aeruginosa_RP73 1 1
Pseudomonas_aeruginosa_B136-33 1 1
Pseudomonas_aeruginosa_PA1R 1 1
Pseudomonas_aeruginosa_PA1 1 1
Pseudomonas_aeruginosa_DK2 1 1
Pseudomonas_aeruginosa_NCGM2.S1 1 1
Pseudomonas_aeruginosa_M18 1 1
Pseudomonas_aeruginosa_LESB58 1 1
Pseudomonas_aeruginosa_PA7 1 1
Pseudomonas_aeruginosa_PAO1 1 1
Candidatus_Nitrososphaera_gargensis_Ga9.2 1 1
Sulfolobus_islandicus_Y.G.57.14 1 1
Sulfolobus_islandicus_L.S.2.15 1 1
Sulfolobus_islandicus_L.D.8.5 1 1
Sulfolobus_solfataricus_98/2 1 1
Methanomethylovorans_hollandica_DSM_15978 5 5
Methanosarcina_mazei_Tuc01 2 2
Methanoregula_formicica_Methanoregula_formicicum_SMSP 2 2
Thermococcus_sp._CL1 1 1
Natrinema_pellirubrum_DSM_15624 2 2
Natronococcus_occultus_SP4 3 3
Haloquadratum_walsbyi_C23 1 1
Haloarcula_hispanica_N601 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   8 8
Pan_troglodytes_69_2.1.4   (Chimpanzee)   7 7
Gorilla_gorilla_69_3.1   (Western gorilla)   8 8
Pongo_abelii_69_2   (Sumatran orangutan)   9 9
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   10 10
Macaca_mulatta_69_1   (Rhesus monkey)   9 9
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   8 8
Otolemur_garnettii_69_3   (Small-eared galago)   6 6
Microcebus_murinus_69_1   (Gray mouse lemur)   2 2
Rattus_norvegicus_69_3.4   (Norway rat)   8 8
Mus_musculus_69_38   (House mouse)   9 9
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   3 3
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   5 5
Cavia_porcellus_69_3   (Domestic guinea pig)   7 7
Oryctolagus_cuniculus_69_2   (Rabbit)   6 6
Ochotona_princeps_69   (American pika)   2 2
Tupaia_belangeri_69   (Northern tree shrew)   2 2
Sus_scrofa_69_10.2   (Pig)   2 2
Bos_taurus_69_3.1   (Cattle)   6 6
Vicugna_pacos_69_1   (Alpaca)   3 3
Tursiops_truncatus_69_1   (Bottlenose dolphin)   7 7
Mustela_putorius_furo_69_1.0   (Domestic ferret)   9 9
Ailuropoda_melanoleuca_69_1   (Giant panda)   8 8
Canis_familiaris_69_3.1   (Dog)   9 9
Felis_catus_69   (Domestic cat)   3 3
Equus_caballus_69_2   (Horse)   10 10
Myotis_lucifugus_69_2.0   (Little brown bat)   5 5
Pteropus_vampyrus_69_1   (Large flying fox)   6 6
Sorex_araneus_69_1   (European shrew)   4 4
Erinaceus_europaeus_69   (Western European hedgehog)   5 5
Procavia_capensis_69_1   (Cape rock hyrax)   5 5
Loxodonta_africana_69_3   (African savanna elephant)   9 9
Echinops_telfairi_69   (Small Madagascar hedgehog)   8 8
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   1 1
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   5 5
Macropus_eugenii_69_1.0   (Tammar wallaby)   5 5
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   7 7
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   7 7
Ornithorhynchus_anatinus_69_5   (Platypus)   9 8
Petromyzon_marinus_69_7.0   (Sea lamprey)   4 4
Meleagris_gallopavo_69_2   (Turkey)   3 3
Gallus_gallus_69_2   (Chicken)   6 6
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   7 7
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   5 5
Anolis_carolinensis_69_2.0   (Green anole)   6 6
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   6 6
Latimeria_chalumnae_69_1   (Coelacanth)   6 6
Gadus_morhua_69_1   (Atlantic cod)   12 12
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   10 10
Takifugu_rubripes_69_4   (Torafugu)   7 7
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   8 8
Oryzias_latipes_69_1   (Japanese medaka)   8 8
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   5 5
Oreochromis_niloticus_69_1.0   (Nile tilapia)   9 9
Danio_rerio_69_9   (Zebrafish)   8 8
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   4 4
Ciona_intestinalis_69   (Vase tunicate)   5 5
Drosophila_melanogaster_69_5   (Fruit fly)   4 4
Caenorhabditis_elegans_69_215   (Roundworm)   2 2
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   3 3
Arabidopsis_thaliana_10   (Thale cress)   7 7

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   21 21
Homo_sapiens__(NCBI_version)   (Human)   9 9
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   9 9
Heliconius_numata__(Incomplete) 1 1
Loa_loa_v3.3_(Request)   (Eye worm)   1 1
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   2 2
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   2 2
Moniliophthora_perniciosa_FA553__(Genome_survey) 1 1
Encephalitozoon_intestinalis__(endoparasite) 2 2
Encephalitozoon_cuniculi_(endoparasite) 3 3
Lotus_japonicus__(Early_assembly) 3 3
Malus_x_domestica_(Duplicate)   (Apple)   12 12
Ricinus_communis__(Early_assembly)   (Castor bean)   2 2
Nicotiana_benthamiana_0.4.4_(Early_draft) 12 11
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   3 3
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   3 3
Phoenix_dactylifera__(Early_draft)   (Date palm)   2 2
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 1 1
NCBI_plasmid_sequences_(Plasmids) 77 76
NCBI_viral_sequences_(Viral) 7 7
Protozoadb_2010_08_(Protozoadb) 123 121
UniProt__viral_sequences_(Viral) 4 4
Protein_Data_Bank_(all_PDB_sequenc) 167 167
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 394 394
PDB_chains_(SCOP_1.75)_(PDB) 8 8
STRING_v9.0.5_(STRING) 1465 1439
Uniprot_2018_03_genome 32923 32483
Core_Eukaryotic_Genes_458_(CEGMA) 3 3
NCBI_2017_08_genome 57229 56746
TargetDB__(Targets) 106 105

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