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Domain combinations for RCC1/BLIP-II superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a RCC1/BLIP-II domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   94 90
Pan_troglodytes_76_2.1.4   (Chimpanzee)   24 20
Gorilla_gorilla_76_3.1   (Western gorilla)   37 33
Pongo_abelii_76_2   (Sumatran orangutan)   24 23
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   25 23
Papio_anubis_76   (Olive baboon)   28 22
Macaca_mulatta_76_1   (Rhesus monkey)   37 33
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   55 50
Otolemur_garnettii_76_3   (Small-eared galago)   28 23
Microcebus_murinus_76_1   (Gray mouse lemur)   26 17
Rattus_norvegicus_76_5.0   (Norway rat)   30 27
Mus_musculus_76_38   (House mouse)   62 55
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   31 21
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   20 19
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   27 22
Cavia_porcellus_76_3   (Domestic guinea pig)   23 20
Oryctolagus_cuniculus_76_2   (Rabbit)   25 21
Ochotona_princeps_76   (American pika)   26 20
Tupaia_belangeri_76   (Northern tree shrew)   25 17
Sus_scrofa_76_10.2   (Pig)   27 25
Bos_taurus_76_3.1   (Cattle)   33 25
Ovis_aries_76_3.1   (Sheep)   30 25
Vicugna_pacos_76_1   (Alpaca)   21 17
Tursiops_truncatus_76_1   (Bottlenose dolphin)   27 22
Mustela_putorius_furo_76_1.0   (Domestic ferret)   25 21
Ailuropoda_melanoleuca_76_1   (Giant panda)   24 21
Canis_familiaris_76_3.1   (Dog)   35 30
Felis_catus_76_6.2   (Domestic cat)   27 23
Equus_caballus_76_2   (Horse)   32 27
Myotis_lucifugus_76_2.0   (Little brown bat)   27 24
Pteropus_vampyrus_76_1   (Large flying fox)   29 21
Sorex_araneus_76_1   (European shrew)   24 17
Erinaceus_europaeus_76   (Western European hedgehog)   27 20
Procavia_capensis_76_1   (Cape rock hyrax)   25 21
Loxodonta_africana_76_3   (African savanna elephant)   35 28
Echinops_telfairi_76   (Small Madagascar hedgehog)   29 22
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   37 33
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   22 15
Macropus_eugenii_76_1.0   (Tammar wallaby)   24 17
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   38 28
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   23 18
Ornithorhynchus_anatinus_76_5   (Platypus)   27 23
Saccoglossus_kowalevskii_v3.0 53 38
Petromyzon_marinus_76_7.0   (Sea lamprey)   19 16
Meleagris_gallopavo_76_2   (Turkey)   22 18
Gallus_gallus_76_4   (Chicken)   24 19
Anas_platyrhynchos_76_1.0   (Mallard)   25 20
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   25 21
Ficedula_albicollis_76_1.0   (Collared flycatcher)   25 20
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   27 24
Anolis_carolinensis_76_2.0   (Green anole)   27 23
Xenopus_laevis_   (African clawed frog)   47 47
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   34 28
Latimeria_chalumnae_76_1   (Coelacanth)   36 29
Lepisosteus_oculatus_76   (Spotted gar)   53 40
Gadus_morhua_76_1   (Atlantic cod)   39 36
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   32 26
Takifugu_rubripes_76_4   (Torafugu)   63 51
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   34 30
Oryzias_latipes_76_1   (Japanese medaka)   29 25
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   34 26
Poecilia_formosa_76   (Amazon molly)   33 24
Oreochromis_niloticus_76_1.0   (Nile tilapia)   37 30
Astyanax_mexicanus_76   (Mexican tetra)   35 28
Danio_rerio_76_9   (Zebrafish)   53 44
Oikopleura_dioica 11 10
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   15 13
Ciona_intestinalis_76   (Vase tunicate)   14 13
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   48 43
Adineta_vaga 28 26
Octopus_bimaculoides_280 43 33
Crassostrea_gigas_22   (Pacific oyster)   28 22
Lottia_gigantea_   (Owl limpet)   27 21
Helobdella_robusta_ 17 16
Capitella_sp._I_ 27 22
Danaus_plexippus_OGS1.0   (Monarch butterfly)   18 13
Heliconius_melpomene_   (Postman butterfly)   18 14
Bombyx_mori_   (Domestic silkworm)   14 14
Nasonia_vitripennis_   (Jewel wasp)   12 9
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   41 37
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   17 14
Linepithema_humile_v1.1   (Argentine ant)   26 23
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   18 14
Solenopsis_invicta_v.2.2.3   (Red fire ant)   17 13
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   29 25
Atta_cephalotes_v1.1 27 23
Camponotus_floridanus_v3.3   (Florida carpenter ant)   44 31
Lucilia_cuprina   (Australian sheep blowfly)   20 16
Drosophila_grimshawi_1.3 17 14
Drosophila_willistoni_1.3 18 16
Drosophila_pseudoobscura_2.13 23 20
Drosophila_persimilis_1.3 23 22
Drosophila_suzukii 17 15
Drosophila_yakuba_1.3 16 15
Drosophila_simulans_1.3 13 12
Drosophila_sechellia_1.3 20 17
Drosophila_melanogaster_76_5   (Fruit fly)   22 19
Drosophila_erecta_1.3 17 14
Drosophila_ananassae_1.3 16 14
Drosophila_virilis_1.2 17 14
Drosophila_mojavensis_1.3 18 14
Megaselia_scalaris_22 13 12
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   24 19
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   20 18
Anopheles_darlingi_22   (American malaria mosquito)   12 10
Anopheles_gambiae_49_3j   (African malaria mosquito)   18 15
Tribolium_castaneum_3.0   (Red flour beetle)   20 17
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   16 14
Acyrthosiphon_pisum_   (Pea aphid)   13 10
Rhodnius_prolixus_22 29 24
Daphnia_pulex_   (Common water flea)   14 12
Strigamia_maritima_22 23 16
Sarcoptes_scabiei 14 14
Tetranychus_urticae_   (Two-spotted spider mite)   7 7
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   7 7
Pristionchus_pacificus_ 10 10
Meloidogyne_incognita_   (Southern root-knot nematode)   8 8
Meloidogyne_hapla_ 6 6
Onchocerca_volvulus_22 11 9
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   19 14
Caenorhabditis_japonica_ 11 10
Caenorhabditis_brenneri_ 15 15
Caenorhabditis_remanei_ 20 19
Caenorhabditis_elegans_76_235   (Roundworm)   13 13
Caenorhabditis_briggsae_2 12 12
Trichinella_spiralis_22 11 9
Hymenolepis_microstoma_ 9 8
Echinococcus_multilocularis_ 8 7
Echinococcus_granulosus_ 8 6
Taenia_solium_   (Pork tapeworm)   7 5
Schistosoma_mansoni_ 10 9
Mnemiopsis_leidyi   (Sea walnut)   22 19
Thelohanellus_kitauei 4 4
Acropora_digitifera_v1.0 31 25
Nematostella_vectensis_1.0   (Starlet sea anemone)   35 30
Hydra_vulgaris 26 21
Amphimedon_queenslandica 36 30
Trichoplax_adhaerens_ 27 21
Proterospongia_sp._ATCC_50818_ 19 16
Monosiga_brevicollis_ 13 11
Sphaeroforma_arctica_JP610_ 17 13
Capsaspora_owczarzaki_ATCC_30864_ 17 11
Conidiobolus_coronatus_NRRL28638_v1.0 5 5
Mortierella_verticillata_NRRL_6337_ 12 12
Phycomyces_blakesleeanus_ 8 8
Rhizopus_oryzae_RA_99-880_ 9 9
Mucor_circinelloides_ 6 6
Rhizomucor_miehei_CAU432_ 9 9
Malassezia_globosa_CBS_7966_ 8 8
Sporisorium_reilianum_22 8 8
Ustilago_maydis_ 8 8
Mixia_osmundae_IAM_14324_v1.0 8 8
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 6 5
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 6 6
Melampsora_laricis-populina_ 6 6
Rhodotorula_graminis_WP1_v1.0 8 8
Sporobolomyces_roseus_IAM_13481_ 6 6
Microbotryum_violaceum_22 8 8
Wallemia_sebi_v1.0 5 5
Sphaerobolus_stellatus_v1.0 12 12
Piloderma_croceum_F_1598_v1.0 7 7
Serpula_lacrymans_var._lacrymans_S7.9_ 6 6
Coniophora_puteana 10 8
Hydnomerulius_pinastri_v2.0 6 6
Paxillus_rubicundulus_Ve08.2h10_v1.0 6 6
Pisolithus_microcarpus_441_v1.0 6 6
Pisolithus_tinctorius_Marx_270_v1.0 7 6
Scleroderma_citrinum_Foug_A_v1.0 6 6
Coprinopsis_cinerea_okayama7_130_v3 6 6
Pleurotus_ostreatus_   (Oyster mushroom)   6 6
Amanita_thiersii_Skay4041_v1.0 6 6
Amanita_muscaria_Koide_v1.0   (Fly agaric)   7 7
Galerina_marginata_v1.0 6 6
Hebeloma_cylindrosporum_h7_v2.0 7 6
Laccaria_bicolor_S238N-H82_ 7 6
Agaricus_bisporus_var._bisporus_ 8 7
Schizophyllum_commune_ 7 7
Stereum_hirsutum_FP-91666_SS1__v1.0 9 8
Heterobasidion_annosum_ 7 7
Gloeophyllum_trabeumv1.0 8 6
Punctularia_strigosozonata_v1.0 7 5
Sebacina_vermifera_MAFF_305830_v1.0 8 7
Fomitiporia_mediterranea_v1.0 7 7
Tulasnella_calospora_AL13/4D_v1.0 6 6
Postia_placenta_ 16 15
Wolfiporia_cocos_MD-104_SS10__v1.0 8 8
Fomitopsis_pinicolav1.0 6 6
Fomitopsis_pinicola_FP-58527_SS1_v3.0 6 6
Phanerochaete_chrysosporium_RP-78_2.1 7 7
Dichomitus_squalens 7 6
Trametes_versicolor_v1.0 5 5
Tremella_mesenterica_   (Witches' butter)   6 6
Daldinia_eschscholzii_EC12_v1.0 5 5
Apiospora_montagnei_NRRL_25634_v1.0 5 5
Magnaporthe_poae_ATCC_64411_22 6 6
Magnaporthe_grisea_70-15_ 8 8
Podospora_anserina_ 6 6
Sporotrichum_thermophile_ATCC_42464_ 6 6
Thielavia_terrestris_NRRL_8126_ 8 7
Chaetomium_globosum_CBS_148.51_ 5 5
Neurospora_tetrasperma_ 6 6
Neurospora_discreta_FGSC_8579_ 6 6
Neurospora_crassa_OR74A_ 6 6
Cryphonectria_parasitica_   (Chestnut blight fungus)   5 5
Verticillium_albo-atrum_VaMs.102_ 6 6
Verticillium_dahliae_VdLs.17_ 5 5
Acremonium_alcalophilumv_1.0 4 4
Glomerella_graminicola_22 5 5
Fusarium_graminearum_ 5 5
Nectria_haematococca_mpVI_ 5 5
Fusarium_oxysporum_f._sp._lycopersici_4286_ 7 7
Fusarium_verticillioides_7600_ 5 5
Trichoderma_asperellum_CBS_433.97_v1.0 4 4
Trichoderma_atroviride_ 5 5
Trichoderma_citrinoviride_v1.0 5 5
Trichoderma_reesei_1.2 5 5
Trichoderma_virens_Gv29-8_ 6 6
Trichoderma_longibrachiatum_ATCC_18648_v1.0 5 5
Trichoderma_harzianum_CBS_226.95_v1.0 5 5
Amorphotheca_resinae_v1.0   (Creosote fungus)   6 6
Botrytis_cinerea_B05.10_ 6 6
Sclerotinia_sclerotiorum_ 6 6
Blumeria_graminis_22 5 5
Didymella_exigua_CBS_183.55_v1.0 6 6
Leptosphaeria_maculans_22 6 6
Setosphaeria_turcica_v1.0 6 6
Cochliobolus_miyabeanus_ATCC_44560_v1.0 6 6
Cochliobolus_victoriae_FI3_v1.0 6 6
Cochliobolus_carbonum_26-R-13_v1.0 7 6
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   6 5
Alternaria_brassicicola_ 5 5
Cochliobolus_lunatus_m118_v2.0 6 5
Pyrenophora_teres_f._teres_22 7 6
Pyrenophora_tritici-repentis_ 6 6
Stagonospora_nodorum_ 7 7
Mycosphaerella_graminicola_IPO323_ 7 6
Zasmidium_cellare_ATCC_36951_v1.0 6 6
Dothistroma_septosporum 6 6
Septoria_musiva_v1.0 7 6
Mycosphaerella_fijiensis_CIRAD86_ 5 5
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 6 6
Paracoccidioides_brasiliensis_Pb18_ 4 4
Coccidioides_posadasii_RMSCC_3488_ 3 3
Coccidioides_immitis_RS_ 3 3
Ajellomyces_dermatitidis_SLH14081_ 4 4
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 4 4
Microsporum_canis_CBS_113480_ 4 4
Trichophyton_equinum_CBS_127.97_ 5 5
Trichophyton_verrucosum_HKI_0517_ 5 5
Arthroderma_benhamiae_CBS_112371_ 5 5
Trichophyton_tonsurans_CBS_112818_ 5 5
Trichophyton_rubrum_CBS_118892_ 5 5
Uncinocarpus_reesii_1704_ 3 3
Aspergillus_zonatus_v1.0 4 4
Penicillium_chrysogenum_Wisconsin_54-1255_ 3 3
Penicillium_chrysogenum_v1.0 4 4
Aspergillus_acidus_v1.0 5 5
Aspergillus_fumigatus_Af293 4 4
Aspergillus_brasiliensis_v1.0 5 5
Aspergillus_nidulans_FGSC_A4_ 5 5
Aspergillus_sydowii_v1.0 6 6
Aspergillus_versicolor_v1.0 6 6
Aspergillus_glaucus 4 4
Aspergillus_carbonarius_ITEM_5010_ 5 5
Neosartorya_fischeri_NRRL_181_ 4 4
Aspergillus_terreus_NIH2624_ 4 4
Aspergillus_tubingensis_v1.0 5 5
Aspergillus_wentii_v1.0 6 6
Aspergillus_oryzae_RIB40_ 4 4
Aspergillus_niger_22 4 4
Aspergillus_niger_ATCC_1015_ 4 4
Aspergillus_flavus_NRRL3357_ 5 5
Aspergillus_clavatus_NRRL_1_ 4 4
Penicillium_marneffei_ATCC_18224_ 5 5
Tuber_melanosporum_Mel28_22 8 8
Tuber_melanosporum_Vittad_   (Perigord truffle)   9 9
Hansenula_polymorpha_v2.0 5 5
Dekkera_bruxellensis_CBS_2499_v2.0 5 5
Pichia_membranifaciensv1.0 4 4
Candida_tanzawaensis_NRRL_Y-17324__v1.0 5 5
Candida_dubliniensis_CD36_ 5 5
Candida_tropicalis_MYA-3404_ 5 5
Candida_parapsilosis_ 5 5
Candida_albicans_SC5314 6 6
Lodderomyces_elongisporus_NRRL_YB-4239_ 6 5
Babjeviella_inositovora_NRRL_Y-12698_v1.0 5 5
Pichia_stipitis_CBS_6054_ 5 5
Candida_guilliermondii_ATCC_6260_ 5 5
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 5 5
Debaromyces_hansenii 5 5
Wickerhamomyces_anomalus 5 5
Pichia_pastoris_GS115_ 4 4
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 7 7
Yarrowia_lipolytica_CLIB122 5 5
Candida_lusitaniae_ATCC_42720_ 5 5
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 4 4
Vanderwaltozyma_polyspora_DSM_70294_ 5 5
Candida_glabrata_CBS138 5 5
Kluyveromyces_thermotolerans_CBS_6340 5 5
Lachancea_kluyveri_ 5 5
Kluyveromyces_waltii 4 4
Ashbya_gossypii_ATCC_10895_ 5 5
Zygosaccharomyces_rouxii_ 5 5
Saccharomyces_mikatae_MIT 4 4
Saccharomyces_paradoxus_MIT 4 4
Saccharomyces_cerevisiae_76   (Baker's yeast)   4 4
Saccharomyces_bayanus_MIT 4 4
Kluyveromyces_lactis 5 5
Schizosaccharomyces_cryophilus_OY26_22 4 4
Schizosaccharomyces_octosporus_yFS286_ 4 4
Schizosaccharomyces_japonicus_yFS275_ 3 3
Schizosaccharomyces_pombe   (Fission yeast)   4 4
Catenaria_anguillulae_PL171_v1.0 6 6
Allomyces_macrogynus_ATCC_38327_ 10 10
Spizellomyces_punctatus_DAOM_BR117_ 8 7
Dictyostelium_discoideum 37 27
Dictyostelium_purpureum_ 33 26
Entamoeba_dispar_1.2 3 3
Entamoeba_invadens_1.2 3 3
Entamoeba_histolytica_1 3 3
Selaginella_moellendorffii_ 74 59
Pinus_taeda   (Loblolly pine)   24 22
Picea_abies   (Norway spruce)   19 18
Eucalyptus_grandis_v201   (Rose gum)   60 48
Theobroma_cacao_B97-61/B2_v1   (Cacao)   35 28
Gossypium_raimondii_v221 130 116
Citrus_clementina_v165 63 54
Citrus_sinensis_v154   (Sweet orange)   84 69
Thellungiella_halophila_v173 47 41
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   48 41
Capsella_rubella_v183 38 32
Arabidopsis_lyrata_   (Lyrate rockcress)   35 31
Arabidopsis_thaliana_10   (Thale cress)   50 38
Carica_papaya_   (Papaya)   33 27
Medicago_truncatula_   (Barrel medic)   66 56
Phaseolus_vulgaris_v186   (French bean)   51 42
Glycine_max_v109   (Soybean)   84 74
Cucumis_sativus_v122   (Cucumber)   55 47
Fragaria_vesca_   (Wild strawberry)   31 26
Malus_domestica_v196   (Apple)   68 54
Prunus_persica_v139   (Peach)   35 27
Linum_usitatissimum_v200   (Flax)   67 54
Manihot_esculenta_v147   (Cassava)   49 40
Populus_trichocarpa_v156   (Black cottonwood)   56 42
Vitis_vinifera_   (Wine grape)   30 25
Mimulus_guttatus_v140   (Spotted monkey flower)   34 29
Solanum_lycopersicum_v.2.3   (Tomato)   31 28
Solanum_tuberosum_   (Potato)   54 47
Actinidia_chinensis_Hongyang_ 37 34
Aquilegia_coerulea_v195 70 57
Triticum_urartu_22 30 24
Triticum_aestivum_22   (Bread wheat)   104 95
Aegilops_tauschii_22 31 28
Brachypodium_distachyon_   (Stiff brome)   40 36
Oryza_barthii_22   (African wild rice)   49 41
Oryza_meridionalis_22 43 39
Oryza_glumaepatula_22 63 53
Oryza_glaberrima   (African rice)   34 27
Oryza_punctata_22 54 47
Oryza_nivara_22 59 51
Oryza_brachyantha_22   (Malo sina)   32 27
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   66 53
Oryza_sativa_v193   (Rice)   66 53
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   58 50
Panicum_virgatum_v202   (Switchgrass)   70 59
Setaria_italica_v164   (Foxtail millet)   43 37
Zea_mays_subsp._mays_   (Maize)   57 53
Zea_mays_v181   (Maize)   61 57
Sorghum_bicolor_   (Sorghum)   36 28
Musa_balbisiana   (Balbis banana)   47 40
Musa_acuminata_22   (Wild Malaysian banana)   48 39
Amborella_trichopoda_22 32 28
Physcomitrella_patens 34 24
Coccomyxa_subellipsoidea_sp._C-169_v2 17 12
Asterochloris_sp._Cgr/DA1pho_v1.0 15 10
Chlorella_variabilis_sp._NC64A_ 20 17
Chlorella_vulgaris_ 20 13
Volvox_carteri_f._nagariensis_ 24 23
Volvox_carteri_v199 25 21
Chlamydomonas_reinhardtii_4.0 23 19
Ostreococcus_sp._RCC809_ 13 11
Ostreococcus_lucimarinus_CCE9901_ 15 14
Ostreococcus_tauri_ 13 11
Bathycoccus_prasinos_ 16 10
Micromonas_sp._RCC299_ 35 26
Micromonas_pusilla_CCMP1545_v3.0 28 21
Cyanidioschyzon_merolae_strain_10D_22 5 5
Cyanidioschyzon_merolae 5 5
Porphyridium_purpureum_02_2012 11 9
Thecamonas_trahens_ATCC_50062_ 29 19
Bigelowiella_natans_CCMP2755_22 74 53
Cyanophora_paradoxa_ 35 31
Leishmania_mexicana_2.4 13 8
Leishmania_major_strain_Friedlin_ 13 8
Leishmania_infantum_JPCM5_2.4 13 8
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 12 8
Trypanosoma_vivax_ 11 8
Trypanosoma_cruzi_strain_CL_Brener 12 9
Trypanosoma_congolense_2.4 16 12
Trypanosoma_brucei_gambiense_v4.1 13 8
Trypanosoma_brucei_TREU927_v4.1 13 8
Ectocarpus_siliculosus 51 39
Aureococcus_anophagefferens_ 34 30
Albugo_laibachii_22 33 23
Pythium_iwayamai_DAOM_BR242034_22 33 25
Pythium_arrhenomanes_ATCC_12531_22 37 29
Pythium_ultimum_v1.7-2 48 35
Pythium_aphanidermatum_DAOM_BR444_22 36 26
Pythium_irregulare_DAOM_BR486_22 40 31
Pythium_vexans_DAOM_BR484_22 33 24
Phytophthora_ramorum_1.1   (Sudden oak death agent)   30 23
Phytophthora_sojae_1.1 35 24
Phytophthora_infestans_T30-4_ 55 39
Phytophthora_capsici_ 28 19
Hyaloperonospora_arabidopsidis_22 20 15
Phaeodactylum_tricornutumCCAP_1055/1 14 12
Fragilariopsis_cylindrus 27 22
Thalassiosira_pseudonana_CCMP1335 31 23
Perkinsus_marinus_ATCC_50983_ 35 33
Paramecium_tetraurelia_ 79 66
Tetrahymena_thermophila_SB210_1_ 66 46
Ichthyophthirius_multifiliis_strain_G5_ 30 25
Cryptosporidium_hominis 12 9
Cryptosporidium_muris 15 9
Cryptosporidium_parvum_Iowa_II 13 9
Neospora_caninum 25 17
Toxoplasma_gondii_VEG 26 16
Toxoplasma_gondii_ME49 25 16
Toxoplasma_gondii_GT1 22 15
Babesia_bovis_T2Bo_ 18 14
Theileria_parva__ 7 6
Theileria_annulata 8 6
Plasmodium_falciparum_3D7_ 16 10
Plasmodium_vivax_SaI-1_7.0 17 11
Plasmodium_knowlesi_strain_H_ 15 11
Plasmodium_yoelii_ssp._yoelii_1_ 16 12
Plasmodium_chabaudi_ 16 11
Plasmodium_berghei_ANKA_ 17 11
Symbiodinium_minutum_clade_B1_v1.2 456 373
Naegleria_gruberi_ 224 184
Trichomonas_vaginalis_ 17 17
Guillardia_theta_CCMP2712_v1.0_ 114 95
Emiliania_huxleyi_CCMP1516_ 98 83
Rivularia_sp._PCC_7116 1 1
Conexibacter_woesei_DSM_14684 2 1
Ilumatobacter_coccineus 20 8
Nakamurella_multipartita_DSM_44233 1 1
Acidothermus_cellulolyticus_11B 1 1
Frankia_symbiont_of_Datisca_glomerata 1 1
Frankia_alni_ACN14a 4 3
Thermomonospora_curvata_DSM_43183 1 1
Kitasatospora_setae_KM-6054 3 2
Streptomyces_sp._PAMC26508 1 1
Streptomyces_flavogriseus_ATCC_33331 1 1
Streptomyces_scabiei_87.22 1 1
Amycolatopsis_mediterranei_U32 2 2
Kribbella_flavida_DSM_17836 2 2
Microlunatus_phosphovorus_NM-1 4 3
Propionibacterium_freudenreichii_subsp._shermanii_CIRM-BIA1 2 1
Salinispora_arenicola_CNS-205 26 16
Salinispora_tropica_CNB-440 9 7
Verrucosispora_maris_AB-18-032 1 1
Micromonospora_sp._L5 2 2
Micromonospora_aurantiaca_ATCC_27029 1 1
Actinoplanes_sp._N902-109 2 1
Actinoplanes_sp._SE50/110 6 3
Actinoplanes_missouriensis_431 1 1
Gordonia_sp._KTR9 5 3
Gordonia_polyisoprenivorans_VH2 8 5
Gordonia_bronchialis_DSM_43247 4 2
Mycobacterium_gilvum_PYR-GCK 2 1
Sanguibacter_keddieii_DSM_10542 5 3
Kytococcus_sedentarius_DSM_20547 1 1
Leifsonia_xyli_subsp._xyli_str._CTCB07 2 2
Microbacterium_testaceum_StLB037 13 3
Xylanimonas_cellulosilytica_DSM_15894 2 1
Arthrobacter_chlorophenolicus_A6 3 2
Arthrobacter_aurescens_TC1 2 2
Arthrobacter_arilaitensis_Re117 1 1
Kocuria_rhizophila_DC2201 1 1
Arthrobacter_sp._Rue61a 4 3
Arthrobacter_sp._FB24 2 1
Micrococcus_luteus_NCTC_2665 1 1
Mobiluncus_curtisii_ATCC_43063 3 2
Actinomyces_sp._F0330 2 2
Anaerolinea_thermophila_UNI-1 1 1
Roseiflexus_sp._RS-1 4 2
Roseiflexus_castenholzii_DSM_13941 2 1
Chloroflexus_sp._Y-400-fl 3 1
Chloroflexus_aggregans_DSM_9485 8 4
Chloroflexus_aurantiacus_J-10-fl 3 1
Deinococcus_maricopensis_DSM_21211 1 1
Deinococcus_proteolyticus_MRP 2 1
Meiothermus_ruber_DSM_1279 1 1
Anaerococcus_prevotii_DSM_20548 2 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Clostridiales_genomosp._BVAB3_str._UPII9-5 2 1
Clostridium_clariflavum_DSM_19732 8 4
Clostridium_thermocellum_ATCC_27405 2 1
Ethanoligenens_harbinense_YUAN-3 2 1
Oscillibacter_valericigenes_Sjm18-20 3 3
Candidatus_Desulforudis_audaxviator_MP104C 2 1
Thermincola_potens_JR 2 1
Desulfosporosinus_acidiphilus_SJ4 3 2
Desulfosporosinus_orientis_DSM_765 2 1
Desulfotomaculum_acetoxidans_DSM_771 3 1
Desulfotomaculum_kuznetsovii_DSM_6115 1 1
Clostridium_difficile_630 5 1
Clostridium_phytofermentans_ISDg 2 2
Clostridium_lentocellum_DSM_5427 1 1
Roseburia_intestinalis 2 2
Syntrophomonas_wolfei_subsp._wolfei_str._Goettingen 1 1
Clostridium_sp._BNL1100 4 3
Clostridium_ljungdahlii_DSM_13528 2 1
Clostridium_cellulovorans_743B 6 4
Clostridium_acetobutylicum_ATCC_824 1 1
Caldicellulosiruptor_kronotskyensis_2002 3 1
Caldicellulosiruptor_lactoaceticus_6A 2 2
Caldicellulosiruptor_kristjanssonii_177R1B 3 1
Caldicellulosiruptor_saccharolyticus_DSM_8903 5 3
Caldicellulosiruptor_bescii_DSM_6725 7 4
Thermoanaerobacterium_thermosaccharolyticum_DSM_571 1 1
Tetragenococcus_halophilus_NBRC_12172 1 1
Kyrpidia_tusciae_DSM_2912 1 1
Brevibacillus_brevis_NBRC_100599 4 4
Paenibacillus_sp._JDR-2 2 1
Paenibacillus_terrae_HPL-003 1 1
Paenibacillus_mucilaginosus_3016 10 8
Paenibacillus_polymyxa_M1 2 2
Bacillus_selenitireducens_MLS10 1 1
Solibacillus_silvestris_StLB046 1 1
Geobacillus_thermoglucosidasius_C56-YS93 1 1
Bacillus_sp._1NLA3E 1 1
Bacillus_weihenstephanensis_KBAB4 2 1
Bacillus_thuringiensis_str._Al_Hakam 1 1
Bacillus_cereus_03BB102 1 1
Bacillus_anthracis_str._A0248 1 1
Gemmatimonas_aurantiaca_T-27 4 2
Chloroherpeton_thalassium_ATCC_35110 2 2
Niastella_koreensis_GR20-10 2 1
Dyadobacter_fermentans_DSM_18053 1 1
Cytophaga_hutchinsonii_ATCC_33406 11 6
Fluviicola_taffensis_DSM_16823 1 1
Owenweeksia_hongkongensis_DSM_17368 5 3
Muricauda_ruestringensis_DSM_13258 1 1
Flavobacterium_indicum_GPTSA100-9 4 3
Flavobacterium_psychrophilum_JIP02/86 3 2
Flavobacterium_branchiophilum_FL-15 2 1
Flavobacterium_johnsoniae_UW101 2 2
Coraliomargarita_akajimensis_DSM_45221 1 1
Opitutus_terrae_PB90-1 6 3
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 2 1
Leptospira_interrogans_serovar_Lai_str._IPAV 2 1
Sphaerochaeta_coccoides_DSM_17374 58 39
Treponema_azotonutricium_ZAS-9 2 1
Treponema_primitia_ZAS-2 1 1
Treponema_succinifaciens_DSM_2489 2 1
Spirochaeta_thermophila_DSM_6192 1 1
Candidatus_Saccharibacteria_bacterium_RAAC3_TM7_1 2 1
Bdellovibrio_bacteriovorus_HD100 23 9
Arcobacter_sp._L 3 3
Helicobacter_hepaticus_ATCC_51449 1 1
Sulfurovum_sp._NBC37-1 1 1
Desulfatibacillum_alkenivorans_AK-01 12 8
Geobacter_sp._M21 2 1
Geobacter_uraniireducens_Rf4 5 4
Geobacter_bemidjiensis_Bem 6 2
Geobacter_sulfurreducens_KN400 3 2
Haliangium_ochraceum_DSM_14365 23 16
Sorangium_cellulosum_'So_ce_56' 18 10
Anaeromyxobacter_sp._Fw109-5 1 1
Anaeromyxobacter_dehalogenans_2CP-1 2 1
Stigmatella_aurantiaca_DW4/3-1 20 14
Corallococcus_coralloides_DSM_2259 20 13
Myxococcus_xanthus_DK_1622 8 4
Myxococcus_fulvus_HW-1 19 7
Dechloromonas_aromatica_RCB 2 1
Candidatus_Accumulibacter_phosphatis_clade_IIA_str._UW-1 1 1
Rubrivivax_gelatinosus_IL144 1 1
Burkholderia_vietnamiensis_G4 3 2
Delftia_sp._Cs1-4 1 1
Delftia_acidovorans_SPH-1 1 1
Rhodoferax_ferrireducens_T118 1 1
Herminiimonas_arsenicoxydans 1 1
Micavibrio_aeruginosavorus_ARL-13 2 2
Methylobacterium_extorquens_AM1 3 1
Sinorhizobium_meliloti_AK83 1 1
Saccharophagus_degradans_2-40 4 1
Cellvibrio_japonicus_Ueda107 5 1
Vibrio_fischeri_MJ11 3 3
Psychromonas_ingrahamii_37 2 1
Psychromonas_sp._CNPT3 1 1
Shewanella_oneidensis_MR-1 10 6
Shewanella_baltica_OS185 1 1
Shewanella_sp._MR-4 2 2
Shewanella_putrefaciens_CN-32 2 2
Hahella_chejuensis_KCTC_2396 1 1
Alkalilimnicola_ehrlichii_MLHE-1 4 2
Thiocystis_violascens_DSM_198 1 1
Legionella_pneumophila_str._Corby 1 1
Photorhabdus_asymbiotica 5 3
Photorhabdus_luminescens_subsp._laumondii_TTO1 4 3
Xenorhabdus_bovienii_SS-2004 1 1
Citrobacter_rodentium_ICC168 1 1
Psychrobacter_sp._G 1 1
Psychrobacter_cryohalolentis_K5 1 1
Francisella_noatunensis_subsp._orientalis_str._Toba_04 1 1
Francisella_sp._TX077308 1 1
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 1 1
Francisella_tularensis_subsp._tularensis_WY96-3418 1 1
Francisella_cf._novicida_3523 1 1
Francisella_novicida_U112 1 1
Methanocella_arvoryzae_MRE50 10 7
Methanocella_conradii_HZ254 26 18
Methanocella_paludicola_SANAE 4 3

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   42 38
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   21 18
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   20 17
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   16 13
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   13 13
Cryptococcus_neoformans_var._grubii_H99_ 8 7
Cryptococcus_neoformans_B-3501A_ 7 7
Cryptococcus_neoformans_JEC21_ 8 8
Paracoccidioides_brasiliensis_Pb01_ 4 4
Paracoccidioides_brasiliensis_Pb03_ 3 3
Coccidioides_posadasii_str._Silveira_ 3 3
Coccidioides_immitis_RMSCC_3703_ 3 3
Coccidioides_immitis_RMSCC_2394_ 3 3
Coccidioides_immitis_H538.4_ 3 3
Ajellomyces_dermatitidis_ER-3_ 4 4
Histoplasma_capsulatum_H143 4 4
Histoplasma_capsulatum_H88 5 5
Histoplasma_capsulatum_G186AR 5 5
Aspergillus_fumigatus_A1163_ 4 4
Candida_albicans_WO-1_ 5 5
Saccharomyces_cerevisiae_UC5 3 3
Saccharomyces_cerevisiae_PW5 4 4
Saccharomyces_cerevisiae_FL100 3 3
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 4 4
Saccharomyces_cerevisiae_YJM269 2 2
Saccharomyces_cerevisiae_T7 4 4
Saccharomyces_cerevisiae_FostersB 4 4
Saccharomyces_cerevisiae_FostersO 3 3
Saccharomyces_cerevisiae_VL3 4 4
Saccharomyces_cerevisiae_Vin13 4 4
Saccharomyces_cerevisiae_LalvinQA23 4 4
Saccharomyces_cerevisiae_AWRI796 4 4
Saccharomyces_cerevisiae_Sigma1278b 4 4
Saccharomyces_cerevisiae_W303 4 4
Saccharomyces_cerevisiae_JAY291 4 4
Saccharomyces_cerevisiae_AWRI1631 1 1
Saccharomyces_cerevisiae_M22 2 2
Saccharomyces_cerevisiae_CLIB215 1 1
Saccharomyces_cerevisiae_Y10 1 1
Saccharomyces_cerevisiae_YJM789_ 4 4
Saccharomyces_cerevisiae_YJM789 4 4
Saccharomyces_cerevisiae_RM11-1a 4 4
Saccharomyces_cerevisiae_RM11-1a_ 4 4
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   4 4
Schizosaccharomyces_pombe_972h-_ 4 4
Batrachochytrium_dendrobatidis_JEL423_ 8 8
Batrachochytrium_dendrobatidis_JAM81_ 8 8
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   30 28
Hordeum_vulgare_22   (Domesticated barley)   110 104
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   39 32
Trypanosoma_brucei_Lister_427_v4.1 11 7
Neospora_caninum_Nc-Liverpool_6.2 25 17
Plasmodium_falciparum_HB3_ 17 10
Plasmodium_falciparum_Dd2_ 12 7
Dactylococcopsis_salina_PCC_8305 1 1
Synechococcus_sp._WH_8102 7 3
Prochlorococcus_marinus_str._NATL2A 2 1
Frankia_sp._EuI1c 2 1
Streptomyces_davawensis_JCM_4913 2 1
Streptomyces_venezuelae_ATCC_10712 4 3
Saccharothrix_espanaensis_DSM_44229 1 1
Amycolatopsis_mediterranei_RB 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_mediterranei_S699 2 2
Amycolatopsis_orientalis_HCCB10007 2 2
Actinoplanes_friuliensis_DSM_7358 6 3
Mycobacterium_gilvum_Spyr1 2 1
Leifsonia_xyli_subsp._cynodontis_DSM_46306 5 5
Bifidobacterium_asteroides_PRL2011 54 21
Actinomyces_viscosus_C505 2 2
Thermus_oshimai_JL-2 1 1
Thermus_thermophilus_JL-18 1 1
Thermus_thermophilus_HB8 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
Clostridium_thermocellum_DSM_1313 2 1
Clostridium_acidurici_9a 2 1
Desulfosporosinus_meridiei_DSM_13257 4 2
Desulfitobacterium_hafniense_DCB-2 4 2
Clostridium_difficile_BI1 5 1
Clostridium_difficile_R20291 5 1
Clostridium_difficile_CD196 5 1
Roseburia_intestinalis_XB6B4 2 2
Clostridium_botulinum_A3_str._Loch_Maree 1 1
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Streptococcus_salivarius_JIM8777 1 1
Thermobacillus_composti_KWC4 1 1
Paenibacillus_sp._Y412MC10 7 5
Paenibacillus_mucilaginosus_KNP414 12 10
Paenibacillus_mucilaginosus_K02 10 8
Paenibacillus_polymyxa_CR1 2 2
Paenibacillus_polymyxa_SC2 2 2
Paenibacillus_polymyxa_E681 2 2
Geobacillus_sp._Y4.1MC1 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_HD-771 1 1
Bacillus_thuringiensis_HD-789 2 1
Bacillus_thuringiensis_MC28 2 1
Bacillus_thuringiensis_serovar_chinensis_CT-43 1 1
Bacillus_thuringiensis_YBT-1518 1 1
Bacillus_thuringiensis_Bt407 1 1
Bacillus_thuringiensis_serovar_kurstaki_str._HD73 1 1
Bacillus_thuringiensis_BMB171 1 1
Bacillus_thuringiensis_serovar_finitimus_YBT-020 1 1
Bacillus_thuringiensis_serovar_thuringiensis_str._IS5056 1 1
Bacillus_cereus_FRI-35 1 1
Bacillus_cereus_B4264 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_F837/76 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_cereus_ATCC_10987 1 1
Bacillus_anthracis_str._H9401 1 1
Bacillus_anthracis_str._CDC_684 1 1
Bacillus_anthracis_str._'Ames_Ancestor' 1 1
Bacillus_anthracis_str._Sterne 1 1
Bacillus_anthracis_str._Ames 1 1
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 2 1
Leptospira_interrogans_serovar_Lai_str._56601 2 1
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 1
Spirochaeta_thermophila_DSM_6578 1 1
Bdellovibrio_bacteriovorus_str._Tiberius 31 13
Geobacter_sp._M18 1 1
Geobacter_sulfurreducens_PCA 3 2
Sorangium_cellulosum_So0157-2 13 7
Anaeromyxobacter_sp._K 3 1
Myxococcus_stipitatus_DSM_14675 25 11
Magnetospirillum_gryphiswaldense_MSR-1_v2 1 1
Micavibrio_aeruginosavorus_EPB 7 5
Vibrio_fischeri_ES114 3 3
Vibrio_sp._EJY3 2 1
Vibrio_nigripulchritudo_VibrioScope 3 2
Shewanella_sp._W3-18-1 2 2
Shewanella_sp._ANA-3 3 2
Shewanella_baltica_BA175 1 1
Shewanella_baltica_OS678 1 1
Shewanella_baltica_OS117 3 2
Shewanella_baltica_OS223 1 1
Shewanella_baltica_OS195 1 1
Shewanella_baltica_OS155 3 2
Shewanella_sp._MR-7 3 2
Shewanella_putrefaciens_200 2 2
Coxiella_burnetii_CbuK_Q154 3 2
Coxiella_burnetii_RSA_331 1 1
Coxiella_burnetii_RSA_493 2 1
Legionella_pneumophila_str._Paris 1 1
Legionella_pneumophila_str._Lens 1 1
Legionella_pneumophila_subsp._pneumophila_LPE509 3 2
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 3 2
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 3 2
Legionella_pneumophila_subsp._pneumophila 3 3
Legionella_pneumophila_subsp._pneumophila 1 1
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 3 2
Legionella_pneumophila_2300/99_Alcoy 1 1
Serratia_marcescens_FGI94 1 1
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 2 1
Pseudomonas_fluorescens_Pf0-1 4 4
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   30 24
Pan_troglodytes_69_2.1.4   (Chimpanzee)   24 20
Gorilla_gorilla_69_3.1   (Western gorilla)   28 24
Pongo_abelii_69_2   (Sumatran orangutan)   22 21
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   23 21
Macaca_mulatta_69_1   (Rhesus monkey)   27 23
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   30 25
Otolemur_garnettii_69_3   (Small-eared galago)   27 22
Microcebus_murinus_69_1   (Gray mouse lemur)   26 17
Rattus_norvegicus_69_3.4   (Norway rat)   27 23
Mus_musculus_69_38   (House mouse)   24 20
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   31 21
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   19 18
Cavia_porcellus_69_3   (Domestic guinea pig)   22 19
Oryctolagus_cuniculus_69_2   (Rabbit)   25 21
Ochotona_princeps_69   (American pika)   26 20
Tupaia_belangeri_69   (Northern tree shrew)   25 17
Sus_scrofa_69_10.2   (Pig)   23 21
Bos_taurus_69_3.1   (Cattle)   28 23
Vicugna_pacos_69_1   (Alpaca)   21 17
Tursiops_truncatus_69_1   (Bottlenose dolphin)   27 22
Mustela_putorius_furo_69_1.0   (Domestic ferret)   25 21
Ailuropoda_melanoleuca_69_1   (Giant panda)   23 20
Canis_familiaris_69_3.1   (Dog)   25 21
Felis_catus_69   (Domestic cat)   20 17
Equus_caballus_69_2   (Horse)   26 22
Myotis_lucifugus_69_2.0   (Little brown bat)   26 23
Pteropus_vampyrus_69_1   (Large flying fox)   29 21
Sorex_araneus_69_1   (European shrew)   24 17
Erinaceus_europaeus_69   (Western European hedgehog)   27 20
Procavia_capensis_69_1   (Cape rock hyrax)   25 21
Loxodonta_africana_69_3   (African savanna elephant)   26 20
Echinops_telfairi_69   (Small Madagascar hedgehog)   29 22
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   23 17
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   22 15
Macropus_eugenii_69_1.0   (Tammar wallaby)   24 17
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   26 21
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   23 18
Ornithorhynchus_anatinus_69_5   (Platypus)   25 21
Petromyzon_marinus_69_7.0   (Sea lamprey)   17 15
Meleagris_gallopavo_69_2   (Turkey)   21 17
Gallus_gallus_69_2   (Chicken)   28 20
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   25 21
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   21 18
Anolis_carolinensis_69_2.0   (Green anole)   26 22
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   25 20
Latimeria_chalumnae_69_1   (Coelacanth)   31 25
Gadus_morhua_69_1   (Atlantic cod)   28 25
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   27 21
Takifugu_rubripes_69_4   (Torafugu)   29 21
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   29 25
Oryzias_latipes_69_1   (Japanese medaka)   25 21
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   34 26
Oreochromis_niloticus_69_1.0   (Nile tilapia)   31 25
Danio_rerio_69_9   (Zebrafish)   32 25
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   11 9
Ciona_intestinalis_69   (Vase tunicate)   14 13
Drosophila_melanogaster_69_5   (Fruit fly)   17 14
Caenorhabditis_elegans_69_215   (Roundworm)   12 12
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   4 4
Arabidopsis_thaliana_10   (Thale cress)   37 29

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   103 97
Homo_sapiens__(NCBI_version)   (Human)   40 36
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   24 20
Heliconius_numata__(Incomplete) 5 5
Loa_loa_v3.3_(Request)   (Eye worm)   12 11
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   14 12
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   12 10
Moniliophthora_perniciosa_FA553__(Genome_survey) 5 5
Encephalitozoon_intestinalis__(endoparasite) 1 1
Encephalitozoon_cuniculi_(endoparasite) 1 1
Lotus_japonicus__(Early_assembly) 39 35
Malus_x_domestica_(Duplicate)   (Apple)   68 54
Ricinus_communis__(Early_assembly)   (Castor bean)   33 27
Nicotiana_benthamiana_0.4.4_(Early_draft) 65 51
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   31 28
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   31 28
Phoenix_dactylifera__(Early_draft)   (Date palm)   27 26
NCBI_plasmid_sequences_(Plasmids) 16 9
NCBI_viral_sequences_(Viral) 35 30
TargetDB__(Targets) 72 61
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 118 117
UniProt__viral_sequences_(Viral) 14 13
Protozoadb_2010_08_(Protozoadb) 415 306
Protein_Data_Bank_(all_PDB_sequenc) 82 82
STRING_v9.0.5_(STRING) 2509 2018
Uniprot_2018_03_genome 39574 30744
PDB_chains_(SCOP_1.75)_(PDB) 3 3
NCBI_2017_08_genome 47085 34139

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