SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain combinations for WW domain superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

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Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a WW domain domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   367 217
Pan_troglodytes_76_2.1.4   (Chimpanzee)   80 45
Gorilla_gorilla_76_3.1   (Western gorilla)   115 66
Pongo_abelii_76_2   (Sumatran orangutan)   93 50
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   77 45
Papio_anubis_76   (Olive baboon)   99 54
Macaca_mulatta_76_1   (Rhesus monkey)   183 108
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   215 112
Otolemur_garnettii_76_3   (Small-eared galago)   80 45
Microcebus_murinus_76_1   (Gray mouse lemur)   50 34
Rattus_norvegicus_76_5.0   (Norway rat)   91 52
Mus_musculus_76_38   (House mouse)   214 135
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   56 36
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   60 37
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   84 47
Cavia_porcellus_76_3   (Domestic guinea pig)   73 40
Oryctolagus_cuniculus_76_2   (Rabbit)   81 45
Ochotona_princeps_76   (American pika)   63 37
Tupaia_belangeri_76   (Northern tree shrew)   57 37
Sus_scrofa_76_10.2   (Pig)   79 53
Bos_taurus_76_3.1   (Cattle)   79 45
Ovis_aries_76_3.1   (Sheep)   88 48
Vicugna_pacos_76_1   (Alpaca)   55 32
Tursiops_truncatus_76_1   (Bottlenose dolphin)   74 47
Mustela_putorius_furo_76_1.0   (Domestic ferret)   77 42
Ailuropoda_melanoleuca_76_1   (Giant panda)   89 49
Canis_familiaris_76_3.1   (Dog)   125 72
Felis_catus_76_6.2   (Domestic cat)   82 49
Equus_caballus_76_2   (Horse)   95 54
Myotis_lucifugus_76_2.0   (Little brown bat)   82 46
Pteropus_vampyrus_76_1   (Large flying fox)   76 41
Sorex_araneus_76_1   (European shrew)   54 34
Erinaceus_europaeus_76   (Western European hedgehog)   58 32
Procavia_capensis_76_1   (Cape rock hyrax)   63 39
Loxodonta_africana_76_3   (African savanna elephant)   113 63
Echinops_telfairi_76   (Small Madagascar hedgehog)   59 36
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   95 53
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   46 28
Macropus_eugenii_76_1.0   (Tammar wallaby)   61 39
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   86 48
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   94 53
Ornithorhynchus_anatinus_76_5   (Platypus)   54 28
Saccoglossus_kowalevskii_v3.0 78 48
Petromyzon_marinus_76_7.0   (Sea lamprey)   45 31
Meleagris_gallopavo_76_2   (Turkey)   86 48
Gallus_gallus_76_4   (Chicken)   74 42
Anas_platyrhynchos_76_1.0   (Mallard)   75 40
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   72 40
Ficedula_albicollis_76_1.0   (Collared flycatcher)   74 40
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   76 42
Anolis_carolinensis_76_2.0   (Green anole)   88 46
Xenopus_laevis_   (African clawed frog)   106 60
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   105 55
Latimeria_chalumnae_76_1   (Coelacanth)   110 57
Lepisosteus_oculatus_76   (Spotted gar)   133 72
Gadus_morhua_76_1   (Atlantic cod)   82 48
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   119 67
Takifugu_rubripes_76_4   (Torafugu)   406 218
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   119 65
Oryzias_latipes_76_1   (Japanese medaka)   100 54
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   99 52
Poecilia_formosa_76   (Amazon molly)   95 50
Oreochromis_niloticus_76_1.0   (Nile tilapia)   149 79
Astyanax_mexicanus_76   (Mexican tetra)   86 55
Danio_rerio_76_9   (Zebrafish)   172 95
Oikopleura_dioica 26 18
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   74 41
Ciona_intestinalis_76   (Vase tunicate)   40 22
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   53 33
Adineta_vaga 83 50
Octopus_bimaculoides_280 63 41
Crassostrea_gigas_22   (Pacific oyster)   46 29
Lottia_gigantea_   (Owl limpet)   38 27
Helobdella_robusta_ 32 21
Capitella_sp._I_ 41 27
Danaus_plexippus_OGS1.0   (Monarch butterfly)   44 28
Heliconius_melpomene_   (Postman butterfly)   34 21
Bombyx_mori_   (Domestic silkworm)   33 24
Nasonia_vitripennis_   (Jewel wasp)   34 21
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   72 38
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   35 21
Linepithema_humile_v1.1   (Argentine ant)   37 25
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   41 26
Solenopsis_invicta_v.2.2.3   (Red fire ant)   31 20
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   38 25
Atta_cephalotes_v1.1 39 26
Camponotus_floridanus_v3.3   (Florida carpenter ant)   38 22
Lucilia_cuprina   (Australian sheep blowfly)   38 21
Drosophila_grimshawi_1.3 42 25
Drosophila_willistoni_1.3 36 21
Drosophila_pseudoobscura_2.13 34 20
Drosophila_persimilis_1.3 31 21
Drosophila_suzukii 41 23
Drosophila_yakuba_1.3 39 23
Drosophila_simulans_1.3 40 25
Drosophila_sechellia_1.3 38 24
Drosophila_melanogaster_76_5   (Fruit fly)   113 61
Drosophila_erecta_1.3 39 23
Drosophila_ananassae_1.3 37 22
Drosophila_virilis_1.2 39 23
Drosophila_mojavensis_1.3 39 23
Megaselia_scalaris_22 14 9
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   48 31
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   50 38
Anopheles_darlingi_22   (American malaria mosquito)   25 16
Anopheles_gambiae_49_3j   (African malaria mosquito)   38 22
Tribolium_castaneum_3.0   (Red flour beetle)   41 25
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   36 22
Acyrthosiphon_pisum_   (Pea aphid)   35 21
Rhodnius_prolixus_22 31 20
Daphnia_pulex_   (Common water flea)   36 22
Strigamia_maritima_22 39 26
Sarcoptes_scabiei 28 17
Tetranychus_urticae_   (Two-spotted spider mite)   34 22
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   21 14
Pristionchus_pacificus_ 22 15
Meloidogyne_incognita_   (Southern root-knot nematode)   17 10
Meloidogyne_hapla_ 17 12
Onchocerca_volvulus_22 26 16
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   35 23
Caenorhabditis_japonica_ 26 16
Caenorhabditis_brenneri_ 36 21
Caenorhabditis_remanei_ 27 16
Caenorhabditis_elegans_76_235   (Roundworm)   56 33
Caenorhabditis_briggsae_2 27 17
Trichinella_spiralis_22 25 18
Hymenolepis_microstoma_ 26 19
Echinococcus_multilocularis_ 26 16
Echinococcus_granulosus_ 26 16
Taenia_solium_   (Pork tapeworm)   26 16
Schistosoma_mansoni_ 28 19
Mnemiopsis_leidyi   (Sea walnut)   28 15
Thelohanellus_kitauei 5 4
Acropora_digitifera_v1.0 31 20
Nematostella_vectensis_1.0   (Starlet sea anemone)   37 25
Hydra_vulgaris 36 23
Amphimedon_queenslandica 39 23
Trichoplax_adhaerens_ 30 20
Proterospongia_sp._ATCC_50818_ 53 38
Monosiga_brevicollis_ 40 29
Sphaeroforma_arctica_JP610_ 17 11
Capsaspora_owczarzaki_ATCC_30864_ 42 23
Conidiobolus_coronatus_NRRL28638_v1.0 12 8
Mortierella_verticillata_NRRL_6337_ 28 20
Phycomyces_blakesleeanus_ 20 14
Rhizopus_oryzae_RA_99-880_ 27 19
Mucor_circinelloides_ 17 11
Rhizomucor_miehei_CAU432_ 23 16
Malassezia_globosa_CBS_7966_ 12 8
Sporisorium_reilianum_22 13 9
Ustilago_maydis_ 13 9
Mixia_osmundae_IAM_14324_v1.0 12 9
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 17 13
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 13 9
Melampsora_laricis-populina_ 15 11
Rhodotorula_graminis_WP1_v1.0 11 7
Sporobolomyces_roseus_IAM_13481_ 10 7
Microbotryum_violaceum_22 12 8
Wallemia_sebi_v1.0 10 7
Sphaerobolus_stellatus_v1.0 18 14
Piloderma_croceum_F_1598_v1.0 20 13
Serpula_lacrymans_var._lacrymans_S7.9_ 12 7
Coniophora_puteana 16 10
Hydnomerulius_pinastri_v2.0 14 8
Paxillus_rubicundulus_Ve08.2h10_v1.0 15 10
Pisolithus_microcarpus_441_v1.0 13 8
Pisolithus_tinctorius_Marx_270_v1.0 17 10
Scleroderma_citrinum_Foug_A_v1.0 18 10
Coprinopsis_cinerea_okayama7_130_v3 23 14
Pleurotus_ostreatus_   (Oyster mushroom)   18 12
Amanita_thiersii_Skay4041_v1.0 15 10
Amanita_muscaria_Koide_v1.0   (Fly agaric)   13 7
Galerina_marginata_v1.0 23 15
Hebeloma_cylindrosporum_h7_v2.0 19 11
Laccaria_bicolor_S238N-H82_ 13 8
Agaricus_bisporus_var._bisporus_ 15 10
Schizophyllum_commune_ 17 11
Stereum_hirsutum_FP-91666_SS1__v1.0 17 12
Heterobasidion_annosum_ 16 10
Gloeophyllum_trabeumv1.0 18 12
Punctularia_strigosozonata_v1.0 13 9
Sebacina_vermifera_MAFF_305830_v1.0 37 23
Fomitiporia_mediterranea_v1.0 15 10
Tulasnella_calospora_AL13/4D_v1.0 24 21
Postia_placenta_ 14 10
Wolfiporia_cocos_MD-104_SS10__v1.0 13 9
Fomitopsis_pinicolav1.0 13 9
Fomitopsis_pinicola_FP-58527_SS1_v3.0 13 9
Phanerochaete_chrysosporium_RP-78_2.1 11 7
Dichomitus_squalens 11 7
Trametes_versicolor_v1.0 12 8
Tremella_mesenterica_   (Witches' butter)   13 9
Daldinia_eschscholzii_EC12_v1.0 14 11
Apiospora_montagnei_NRRL_25634_v1.0 15 11
Magnaporthe_poae_ATCC_64411_22 19 13
Magnaporthe_grisea_70-15_ 15 12
Podospora_anserina_ 12 9
Sporotrichum_thermophile_ATCC_42464_ 13 9
Thielavia_terrestris_NRRL_8126_ 14 10
Chaetomium_globosum_CBS_148.51_ 13 10
Neurospora_tetrasperma_ 11 8
Neurospora_discreta_FGSC_8579_ 12 9
Neurospora_crassa_OR74A_ 13 10
Cryphonectria_parasitica_   (Chestnut blight fungus)   17 12
Verticillium_albo-atrum_VaMs.102_ 14 11
Verticillium_dahliae_VdLs.17_ 13 10
Acremonium_alcalophilumv_1.0 16 12
Glomerella_graminicola_22 14 11
Fusarium_graminearum_ 14 11
Nectria_haematococca_mpVI_ 18 12
Fusarium_oxysporum_f._sp._lycopersici_4286_ 13 9
Fusarium_verticillioides_7600_ 16 11
Trichoderma_asperellum_CBS_433.97_v1.0 18 12
Trichoderma_atroviride_ 15 11
Trichoderma_citrinoviride_v1.0 14 11
Trichoderma_reesei_1.2 13 10
Trichoderma_virens_Gv29-8_ 12 9
Trichoderma_longibrachiatum_ATCC_18648_v1.0 10 7
Trichoderma_harzianum_CBS_226.95_v1.0 13 10
Amorphotheca_resinae_v1.0   (Creosote fungus)   16 11
Botrytis_cinerea_B05.10_ 15 10
Sclerotinia_sclerotiorum_ 13 9
Blumeria_graminis_22 11 8
Didymella_exigua_CBS_183.55_v1.0 16 12
Leptosphaeria_maculans_22 15 11
Setosphaeria_turcica_v1.0 15 11
Cochliobolus_miyabeanus_ATCC_44560_v1.0 15 11
Cochliobolus_victoriae_FI3_v1.0 15 11
Cochliobolus_carbonum_26-R-13_v1.0 15 11
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   13 10
Alternaria_brassicicola_ 13 9
Cochliobolus_lunatus_m118_v2.0 15 11
Pyrenophora_teres_f._teres_22 13 11
Pyrenophora_tritici-repentis_ 12 10
Stagonospora_nodorum_ 15 11
Mycosphaerella_graminicola_IPO323_ 15 10
Zasmidium_cellare_ATCC_36951_v1.0 16 12
Dothistroma_septosporum 11 8
Septoria_musiva_v1.0 12 9
Mycosphaerella_fijiensis_CIRAD86_ 8 7
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 14 11
Paracoccidioides_brasiliensis_Pb18_ 11 8
Coccidioides_posadasii_RMSCC_3488_ 13 10
Coccidioides_immitis_RS_ 13 10
Ajellomyces_dermatitidis_SLH14081_ 10 7
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 11 8
Microsporum_canis_CBS_113480_ 12 8
Trichophyton_equinum_CBS_127.97_ 13 9
Trichophyton_verrucosum_HKI_0517_ 10 8
Arthroderma_benhamiae_CBS_112371_ 10 8
Trichophyton_tonsurans_CBS_112818_ 13 9
Trichophyton_rubrum_CBS_118892_ 13 9
Uncinocarpus_reesii_1704_ 11 7
Aspergillus_zonatus_v1.0 15 11
Penicillium_chrysogenum_Wisconsin_54-1255_ 13 10
Penicillium_chrysogenum_v1.0 14 10
Aspergillus_acidus_v1.0 14 10
Aspergillus_fumigatus_Af293 13 10
Aspergillus_brasiliensis_v1.0 15 11
Aspergillus_nidulans_FGSC_A4_ 16 12
Aspergillus_sydowii_v1.0 16 12
Aspergillus_versicolor_v1.0 14 10
Aspergillus_glaucus 13 10
Aspergillus_carbonarius_ITEM_5010_ 12 9
Neosartorya_fischeri_NRRL_181_ 12 9
Aspergillus_terreus_NIH2624_ 11 9
Aspergillus_tubingensis_v1.0 15 11
Aspergillus_wentii_v1.0 13 9
Aspergillus_oryzae_RIB40_ 10 8
Aspergillus_niger_22 14 10
Aspergillus_niger_ATCC_1015_ 7 5
Aspergillus_flavus_NRRL3357_ 16 11
Aspergillus_clavatus_NRRL_1_ 13 10
Penicillium_marneffei_ATCC_18224_ 15 11
Tuber_melanosporum_Mel28_22 10 7
Tuber_melanosporum_Vittad_   (Perigord truffle)   11 8
Hansenula_polymorpha_v2.0 9 6
Dekkera_bruxellensis_CBS_2499_v2.0 9 6
Pichia_membranifaciensv1.0 8 6
Candida_tanzawaensis_NRRL_Y-17324__v1.0 10 7
Candida_dubliniensis_CD36_ 9 6
Candida_tropicalis_MYA-3404_ 9 6
Candida_parapsilosis_ 8 5
Candida_albicans_SC5314 9 6
Lodderomyces_elongisporus_NRRL_YB-4239_ 9 6
Babjeviella_inositovora_NRRL_Y-12698_v1.0 10 7
Pichia_stipitis_CBS_6054_ 10 7
Candida_guilliermondii_ATCC_6260_ 8 5
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 10 7
Debaromyces_hansenii 9 6
Wickerhamomyces_anomalus 11 8
Pichia_pastoris_GS115_ 10 7
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 4 2
Yarrowia_lipolytica_CLIB122 9 6
Candida_lusitaniae_ATCC_42720_ 8 5
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 8 5
Vanderwaltozyma_polyspora_DSM_70294_ 9 6
Candida_glabrata_CBS138 9 6
Kluyveromyces_thermotolerans_CBS_6340 9 6
Lachancea_kluyveri_ 9 5
Kluyveromyces_waltii 8 5
Ashbya_gossypii_ATCC_10895_ 9 6
Zygosaccharomyces_rouxii_ 10 6
Saccharomyces_mikatae_MIT 9 6
Saccharomyces_paradoxus_MIT 9 6
Saccharomyces_cerevisiae_76   (Baker's yeast)   9 6
Saccharomyces_bayanus_MIT 9 6
Kluyveromyces_lactis 9 6
Schizosaccharomyces_cryophilus_OY26_22 14 8
Schizosaccharomyces_octosporus_yFS286_ 14 8
Schizosaccharomyces_japonicus_yFS275_ 12 7
Schizosaccharomyces_pombe   (Fission yeast)   15 9
Catenaria_anguillulae_PL171_v1.0 9 7
Allomyces_macrogynus_ATCC_38327_ 28 21
Spizellomyces_punctatus_DAOM_BR117_ 20 14
Dictyostelium_discoideum 10 7
Dictyostelium_purpureum_ 9 6
Entamoeba_dispar_1.2 5 5
Entamoeba_invadens_1.2 6 6
Entamoeba_histolytica_1 5 5
Selaginella_moellendorffii_ 30 24
Pinus_taeda   (Loblolly pine)   9 7
Picea_abies   (Norway spruce)   12 10
Eucalyptus_grandis_v201   (Rose gum)   29 21
Theobroma_cacao_B97-61/B2_v1   (Cacao)   18 13
Gossypium_raimondii_v221 76 56
Citrus_clementina_v165 27 18
Citrus_sinensis_v154   (Sweet orange)   31 21
Thellungiella_halophila_v173 23 17
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   21 16
Capsella_rubella_v183 21 15
Arabidopsis_lyrata_   (Lyrate rockcress)   18 13
Arabidopsis_thaliana_10   (Thale cress)   32 24
Carica_papaya_   (Papaya)   7 7
Medicago_truncatula_   (Barrel medic)   27 18
Phaseolus_vulgaris_v186   (French bean)   24 17
Glycine_max_v109   (Soybean)   30 23
Cucumis_sativus_v122   (Cucumber)   37 26
Fragaria_vesca_   (Wild strawberry)   23 18
Malus_domestica_v196   (Apple)   33 27
Prunus_persica_v139   (Peach)   20 15
Linum_usitatissimum_v200   (Flax)   36 27
Manihot_esculenta_v147   (Cassava)   20 17
Populus_trichocarpa_v156   (Black cottonwood)   30 24
Vitis_vinifera_   (Wine grape)   15 11
Mimulus_guttatus_v140   (Spotted monkey flower)   14 11
Solanum_lycopersicum_v.2.3   (Tomato)   19 15
Solanum_tuberosum_   (Potato)   15 12
Actinidia_chinensis_Hongyang_ 17 14
Aquilegia_coerulea_v195 41 29
Triticum_urartu_22 13 9
Triticum_aestivum_22   (Bread wheat)   43 33
Aegilops_tauschii_22 14 9
Brachypodium_distachyon_   (Stiff brome)   26 20
Oryza_barthii_22   (African wild rice)   19 15
Oryza_meridionalis_22 23 18
Oryza_glumaepatula_22 25 18
Oryza_glaberrima   (African rice)   12 11
Oryza_punctata_22 32 23
Oryza_nivara_22 34 25
Oryza_brachyantha_22   (Malo sina)   14 11
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   24 20
Oryza_sativa_v193   (Rice)   24 20
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   14 13
Panicum_virgatum_v202   (Switchgrass)   39 32
Setaria_italica_v164   (Foxtail millet)   31 24
Zea_mays_subsp._mays_   (Maize)   29 24
Zea_mays_v181   (Maize)   31 26
Sorghum_bicolor_   (Sorghum)   16 11
Musa_balbisiana   (Balbis banana)   20 17
Musa_acuminata_22   (Wild Malaysian banana)   24 22
Amborella_trichopoda_22 12 8
Physcomitrella_patens 26 21
Coccomyxa_subellipsoidea_sp._C-169_v2 13 12
Asterochloris_sp._Cgr/DA1pho_v1.0 13 12
Chlorella_variabilis_sp._NC64A_ 11 9
Chlorella_vulgaris_ 13 10
Volvox_carteri_f._nagariensis_ 20 18
Volvox_carteri_v199 24 21
Chlamydomonas_reinhardtii_4.0 20 18
Ostreococcus_sp._RCC809_ 17 14
Ostreococcus_lucimarinus_CCE9901_ 15 12
Ostreococcus_tauri_ 15 14
Bathycoccus_prasinos_ 18 16
Micromonas_sp._RCC299_ 27 23
Micromonas_pusilla_CCMP1545_v3.0 28 25
Cyanidioschyzon_merolae_strain_10D_22 1 1
Cyanidioschyzon_merolae 1 1
Porphyridium_purpureum_02_2012 5 2
Thecamonas_trahens_ATCC_50062_ 71 43
Bigelowiella_natans_CCMP2755_22 77 66
Giardia_lamblia_2.3 2 2
Cyanophora_paradoxa_ 34 32
Leishmania_mexicana_2.4 11 8
Leishmania_major_strain_Friedlin_ 11 8
Leishmania_infantum_JPCM5_2.4 11 8
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 10 8
Trypanosoma_vivax_ 10 8
Trypanosoma_cruzi_strain_CL_Brener 18 14
Trypanosoma_congolense_2.4 11 8
Trypanosoma_brucei_gambiense_v4.1 10 8
Trypanosoma_brucei_TREU927_v4.1 10 8
Ectocarpus_siliculosus 95 56
Aureococcus_anophagefferens_ 59 43
Albugo_laibachii_22 54 42
Pythium_iwayamai_DAOM_BR242034_22 73 53
Pythium_arrhenomanes_ATCC_12531_22 57 48
Pythium_ultimum_v1.7-2 76 59
Pythium_aphanidermatum_DAOM_BR444_22 71 54
Pythium_irregulare_DAOM_BR486_22 79 62
Pythium_vexans_DAOM_BR484_22 56 46
Phytophthora_ramorum_1.1   (Sudden oak death agent)   67 48
Phytophthora_sojae_1.1 66 49
Phytophthora_infestans_T30-4_ 72 55
Phytophthora_capsici_ 49 38
Hyaloperonospora_arabidopsidis_22 26 19
Phaeodactylum_tricornutumCCAP_1055/1 30 16
Fragilariopsis_cylindrus 35 26
Thalassiosira_pseudonana_CCMP1335 36 21
Perkinsus_marinus_ATCC_50983_ 45 27
Paramecium_tetraurelia_ 6 4
Tetrahymena_thermophila_SB210_1_ 7 6
Cryptosporidium_hominis 1 1
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 1 1
Neospora_caninum 9 8
Toxoplasma_gondii_VEG 9 8
Toxoplasma_gondii_ME49 10 9
Toxoplasma_gondii_GT1 9 8
Babesia_bovis_T2Bo_ 12 10
Theileria_parva__ 6 5
Theileria_annulata 6 6
Plasmodium_falciparum_3D7_ 6 5
Plasmodium_vivax_SaI-1_7.0 7 6
Plasmodium_knowlesi_strain_H_ 7 6
Plasmodium_yoelii_ssp._yoelii_1_ 8 7
Plasmodium_chabaudi_ 7 6
Plasmodium_berghei_ANKA_ 7 6
Symbiodinium_minutum_clade_B1_v1.2 152 107
Naegleria_gruberi_ 13 9
Trichomonas_vaginalis_ 9 8
Guillardia_theta_CCMP2712_v1.0_ 90 83
Emiliania_huxleyi_CCMP1516_ 117 98

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Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   146 83
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   95 50
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   47 27
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   26 16
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   50 29
Cryptococcus_neoformans_var._grubii_H99_ 11 8
Cryptococcus_neoformans_B-3501A_ 19 14
Cryptococcus_neoformans_JEC21_ 14 11
Paracoccidioides_brasiliensis_Pb01_ 12 8
Paracoccidioides_brasiliensis_Pb03_ 10 7
Coccidioides_posadasii_str._Silveira_ 12 9
Coccidioides_immitis_RMSCC_3703_ 10 7
Coccidioides_immitis_RMSCC_2394_ 13 10
Coccidioides_immitis_H538.4_ 10 8
Ajellomyces_dermatitidis_ER-3_ 10 7
Histoplasma_capsulatum_H143 11 8
Histoplasma_capsulatum_H88 12 9
Histoplasma_capsulatum_G186AR 12 9
Aspergillus_fumigatus_A1163_ 13 10
Candida_albicans_WO-1_ 9 6
Saccharomyces_cerevisiae_UC5 9 6
Saccharomyces_cerevisiae_PW5 6 4
Saccharomyces_cerevisiae_FL100 4 3
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 5 3
Saccharomyces_cerevisiae_CBS7960 9 6
Saccharomyces_cerevisiae_YJM269 9 6
Saccharomyces_cerevisiae_T7 9 6
Saccharomyces_cerevisiae_FostersB 9 6
Saccharomyces_cerevisiae_FostersO 5 4
Saccharomyces_cerevisiae_VL3 9 6
Saccharomyces_cerevisiae_Vin13 8 5
Saccharomyces_cerevisiae_LalvinQA23 8 5
Saccharomyces_cerevisiae_AWRI796 9 6
Saccharomyces_cerevisiae_Sigma1278b 9 6
Saccharomyces_cerevisiae_W303 9 6
Saccharomyces_cerevisiae_JAY291 9 6
Saccharomyces_cerevisiae_AWRI1631 2 2
Saccharomyces_cerevisiae_YPS163 1 1
Saccharomyces_cerevisiae_M22 1 1
Saccharomyces_cerevisiae_T73 5 4
Saccharomyces_cerevisiae_CLIB215 4 4
Saccharomyces_cerevisiae_Y10 6 5
Saccharomyces_cerevisiae_YJM789_ 9 6
Saccharomyces_cerevisiae_YJM789 9 6
Saccharomyces_cerevisiae_RM11-1a 9 6
Saccharomyces_cerevisiae_RM11-1a_ 9 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   9 6
Schizosaccharomyces_pombe_972h-_ 15 9
Batrachochytrium_dendrobatidis_JEL423_ 12 9
Batrachochytrium_dendrobatidis_JAM81_ 9 6
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   17 14
Hordeum_vulgare_22   (Domesticated barley)   32 23
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   19 15
Trypanosoma_brucei_Lister_427_v4.1 9 7
Neospora_caninum_Nc-Liverpool_6.2 9 8
Plasmodium_falciparum_HB3_ 6 5

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Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   89 48
Pan_troglodytes_69_2.1.4   (Chimpanzee)   79 44
Gorilla_gorilla_69_3.1   (Western gorilla)   78 45
Pongo_abelii_69_2   (Sumatran orangutan)   81 45
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   73 41
Macaca_mulatta_69_1   (Rhesus monkey)   82 47
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   82 47
Otolemur_garnettii_69_3   (Small-eared galago)   77 43
Microcebus_murinus_69_1   (Gray mouse lemur)   50 34
Rattus_norvegicus_69_3.4   (Norway rat)   84 47
Mus_musculus_69_38   (House mouse)   81 46
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   54 35
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   58 35
Cavia_porcellus_69_3   (Domestic guinea pig)   71 39
Oryctolagus_cuniculus_69_2   (Rabbit)   74 40
Ochotona_princeps_69   (American pika)   63 37
Tupaia_belangeri_69   (Northern tree shrew)   57 37
Sus_scrofa_69_10.2   (Pig)   67 45
Bos_taurus_69_3.1   (Cattle)   72 41
Vicugna_pacos_69_1   (Alpaca)   54 31
Tursiops_truncatus_69_1   (Bottlenose dolphin)   73 46
Mustela_putorius_furo_69_1.0   (Domestic ferret)   77 42
Ailuropoda_melanoleuca_69_1   (Giant panda)   76 43
Canis_familiaris_69_3.1   (Dog)   80 47
Felis_catus_69   (Domestic cat)   52 34
Equus_caballus_69_2   (Horse)   75 42
Myotis_lucifugus_69_2.0   (Little brown bat)   77 44
Pteropus_vampyrus_69_1   (Large flying fox)   74 40
Sorex_araneus_69_1   (European shrew)   54 34
Erinaceus_europaeus_69   (Western European hedgehog)   58 32
Procavia_capensis_69_1   (Cape rock hyrax)   61 38
Loxodonta_africana_69_3   (African savanna elephant)   75 42
Echinops_telfairi_69   (Small Madagascar hedgehog)   59 36
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   48 30
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   45 27
Macropus_eugenii_69_1.0   (Tammar wallaby)   60 38
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   68 38
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   83 48
Ornithorhynchus_anatinus_69_5   (Platypus)   49 26
Petromyzon_marinus_69_7.0   (Sea lamprey)   37 25
Meleagris_gallopavo_69_2   (Turkey)   69 37
Gallus_gallus_69_2   (Chicken)   73 37
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   69 37
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   64 35
Anolis_carolinensis_69_2.0   (Green anole)   74 40
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   70 39
Latimeria_chalumnae_69_1   (Coelacanth)   74 42
Gadus_morhua_69_1   (Atlantic cod)   82 48
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   91 52
Takifugu_rubripes_69_4   (Torafugu)   106 57
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   97 54
Oryzias_latipes_69_1   (Japanese medaka)   87 48
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   99 52
Oreochromis_niloticus_69_1.0   (Nile tilapia)   101 55
Danio_rerio_69_9   (Zebrafish)   99 54
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   33 19
Ciona_intestinalis_69   (Vase tunicate)   35 20
Drosophila_melanogaster_69_5   (Fruit fly)   40 23
Caenorhabditis_elegans_69_215   (Roundworm)   30 19
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   9 6
Arabidopsis_thaliana_10   (Thale cress)   17 12

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Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   396 231
Homo_sapiens__(NCBI_version)   (Human)   185 106
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   83 47
Heliconius_numata__(Incomplete) 13 8
Loa_loa_v3.3_(Request)   (Eye worm)   27 17
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   25 16
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   29 19
Moniliophthora_perniciosa_FA553__(Genome_survey) 5 2
Encephalitozoon_intestinalis__(endoparasite) 2 1
Encephalitozoon_cuniculi_(endoparasite) 2 1
Lotus_japonicus__(Early_assembly) 7 7
Malus_x_domestica_(Duplicate)   (Apple)   33 27
Ricinus_communis__(Early_assembly)   (Castor bean)   19 14
Nicotiana_benthamiana_0.4.4_(Early_draft) 30 24
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   18 14
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   19 15
Phoenix_dactylifera__(Early_draft)   (Date palm)   12 10
Protozoadb_2010_08_(Protozoadb) 240 201
PDB_chains_(SCOP_1.75)_(PDB) 31 29
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 388 388
TargetDB__(Targets) 142 91
STRING_v9.0.5_(STRING) 3851 2398
Uniprot_2018_03_genome 49108 31173
NCBI_2017_08_genome 75970 43196
Protein_Data_Bank_(all_PDB_sequenc) 213 203

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