SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain combinations for Clavaminate synthase-like superfamily in groups of genomes

Domain combinations in groups of genomes

Click on a group of genomes below to view all sequences containing the chosen domain combination in that group of genomes.

Groups of genomes may be slower than individual genomes.


Jump to [ Top of page · Domain combinations in groups of genomes ]

Domain combinations in individual genomes

Click on a genome below to view all domain combinations containing a Clavaminate synthase-like domain in that genome.

Complete genomes
Genome     Number   Proteins
Homo_sapiens_76_38   (Human)   174 174
Pan_troglodytes_76_2.1.4   (Chimpanzee)   50 50
Gorilla_gorilla_76_3.1   (Western gorilla)   73 72
Pongo_abelii_76_2   (Sumatran orangutan)   43 42
Nomascus_leucogenys_76_1.0   (Northern white-cheeked gibbon)   42 42
Papio_anubis_76   (Olive baboon)   51 51
Macaca_mulatta_76_1   (Rhesus monkey)   79 79
Callithrix_jacchus_76_3.2.1   (White-tufted-ear marmoset)   91 91
Otolemur_garnettii_76_3   (Small-eared galago)   41 41
Microcebus_murinus_76_1   (Gray mouse lemur)   43 41
Rattus_norvegicus_76_5.0   (Norway rat)   55 55
Mus_musculus_76_38   (House mouse)   131 131
Dipodomys_ordii_76_1   (Ord's kangaroo rat)   42 39
Ictidomys_tridecemlineatus_76_2   (Thirteen-lined ground squirrel)   42 42
Heterocephalus_glaber_v1.7-2   (Naked mole-rat)   52 52
Cavia_porcellus_76_3   (Domestic guinea pig)   47 47
Oryctolagus_cuniculus_76_2   (Rabbit)   44 44
Ochotona_princeps_76   (American pika)   38 35
Tupaia_belangeri_76   (Northern tree shrew)   39 32
Sus_scrofa_76_10.2   (Pig)   65 65
Bos_taurus_76_3.1   (Cattle)   45 45
Ovis_aries_76_3.1   (Sheep)   51 50
Vicugna_pacos_76_1   (Alpaca)   31 30
Tursiops_truncatus_76_1   (Bottlenose dolphin)   43 41
Mustela_putorius_furo_76_1.0   (Domestic ferret)   48 48
Ailuropoda_melanoleuca_76_1   (Giant panda)   49 49
Canis_familiaris_76_3.1   (Dog)   63 62
Felis_catus_76_6.2   (Domestic cat)   43 43
Equus_caballus_76_2   (Horse)   47 47
Myotis_lucifugus_76_2.0   (Little brown bat)   50 50
Pteropus_vampyrus_76_1   (Large flying fox)   42 40
Sorex_araneus_76_1   (European shrew)   26 25
Erinaceus_europaeus_76   (Western European hedgehog)   36 34
Procavia_capensis_76_1   (Cape rock hyrax)   38 35
Loxodonta_africana_76_3   (African savanna elephant)   66 65
Echinops_telfairi_76   (Small Madagascar hedgehog)   37 36
Dasypus_novemcinctus_76_2   (Nine-banded armadillo)   53 53
Choloepus_hoffmanni_76_1   (Hoffmann's two-fingered sloth)   33 29
Macropus_eugenii_76_1.0   (Tammar wallaby)   40 35
Sarcophilus_harrisii_76_7.0   (Tasmanian devil)   49 49
Monodelphis_domestica_76_5   (Gray short-tailed opossum)   43 43
Ornithorhynchus_anatinus_76_5   (Platypus)   40 40
Saccoglossus_kowalevskii_v3.0 128 128
Petromyzon_marinus_76_7.0   (Sea lamprey)   30 30
Meleagris_gallopavo_76_2   (Turkey)   36 36
Gallus_gallus_76_4   (Chicken)   36 36
Anas_platyrhynchos_76_1.0   (Mallard)   40 40
Taeniopygia_guttata_76_3.2.4   (Zebra finch)   41 41
Ficedula_albicollis_76_1.0   (Collared flycatcher)   37 37
Pelodiscus_sinensis_76_1.0   (Chinese soft-shelled turtle)   47 47
Anolis_carolinensis_76_2.0   (Green anole)   41 40
Xenopus_laevis_   (African clawed frog)   52 52
Xenopus_tropicalis_76_4.2   (Tropical clawed frog)   54 54
Latimeria_chalumnae_76_1   (Coelacanth)   48 48
Lepisosteus_oculatus_76   (Spotted gar)   52 52
Gadus_morhua_76_1   (Atlantic cod)   44 44
Tetraodon_nigroviridis_76_8   (Spotted green pufferfish)   50 50
Takifugu_rubripes_76_4   (Torafugu)   120 120
Gasterosteus_aculeatus_76_1   (Three-spined stickleback)   50 50
Oryzias_latipes_76_1   (Japanese medaka)   57 57
Xiphophorus_maculatus_76_4.4.2   (Southern platyfish)   48 48
Poecilia_formosa_76   (Amazon molly)   48 48
Oreochromis_niloticus_76_1.0   (Nile tilapia)   66 66
Astyanax_mexicanus_76   (Mexican tetra)   52 51
Danio_rerio_76_9   (Zebrafish)   80 80
Oikopleura_dioica 46 46
Ciona_savignyi_76_2.0   (Pacific transparent sea squirt)   98 98
Ciona_intestinalis_76   (Vase tunicate)   70 70
Strongylocentrotus_purpuratus_v3.1   (Purple sea urchin)   73 70
Adineta_vaga 158 157
Octopus_bimaculoides_280 49 49
Crassostrea_gigas_22   (Pacific oyster)   73 70
Lottia_gigantea_   (Owl limpet)   66 66
Helobdella_robusta_ 39 37
Capitella_sp._I_ 66 66
Danaus_plexippus_OGS1.0   (Monarch butterfly)   29 29
Heliconius_melpomene_   (Postman butterfly)   28 26
Bombyx_mori_   (Domestic silkworm)   25 24
Nasonia_vitripennis_   (Jewel wasp)   22 22
Apis_mellifera_38.2d_(Not_maintained)   (Honey bee)   29 29
Harpegnathos_saltator_v3.3   (Jerdon's jumping ant)   24 24
Linepithema_humile_v1.1   (Argentine ant)   25 25
Pogonomyrmex_barbatus_v1.2   (Red harvester ant)   24 24
Solenopsis_invicta_v.2.2.3   (Red fire ant)   19 19
Acromyrmex_echinatior_v3.8   (Panamanian leafcutter ant)   25 25
Atta_cephalotes_v1.1 25 25
Camponotus_floridanus_v3.3   (Florida carpenter ant)   26 25
Lucilia_cuprina   (Australian sheep blowfly)   26 26
Drosophila_grimshawi_1.3 28 28
Drosophila_willistoni_1.3 30 30
Drosophila_pseudoobscura_2.13 32 32
Drosophila_persimilis_1.3 31 31
Drosophila_suzukii 32 30
Drosophila_yakuba_1.3 32 32
Drosophila_simulans_1.3 27 27
Drosophila_sechellia_1.3 30 30
Drosophila_melanogaster_76_5   (Fruit fly)   50 50
Drosophila_erecta_1.3 29 29
Drosophila_ananassae_1.3 30 30
Drosophila_virilis_1.2 27 27
Drosophila_mojavensis_1.3 27 27
Megaselia_scalaris_22 12 12
Aedes_aegypti_55_(Not_maintained)   (Yellow fever mosquito)   29 29
Culex_pipiens_quinquefasciatus_   (Southern house mosquito)   27 26
Anopheles_darlingi_22   (American malaria mosquito)   21 21
Anopheles_gambiae_49_3j   (African malaria mosquito)   24 24
Tribolium_castaneum_3.0   (Red flour beetle)   25 25
Pediculus_humanus_corporis__(Early_assembly)   (Human body louse)   27 27
Acyrthosiphon_pisum_   (Pea aphid)   33 32
Rhodnius_prolixus_22 23 23
Daphnia_pulex_   (Common water flea)   67 66
Strigamia_maritima_22 32 32
Sarcoptes_scabiei 17 16
Tetranychus_urticae_   (Two-spotted spider mite)   25 25
Ixodes_scapularis__(Preliminary)   (Black-legged tick)   30 30
Pristionchus_pacificus_ 41 41
Meloidogyne_incognita_   (Southern root-knot nematode)   21 21
Meloidogyne_hapla_ 19 19
Onchocerca_volvulus_22 14 14
Brugia_malayi_WS250   (Agent of lymphatic filariasis)   19 19
Caenorhabditis_japonica_ 24 24
Caenorhabditis_brenneri_ 66 66
Caenorhabditis_remanei_ 51 51
Caenorhabditis_elegans_76_235   (Roundworm)   37 37
Caenorhabditis_briggsae_2 36 36
Trichinella_spiralis_22 16 16
Hymenolepis_microstoma_ 16 16
Echinococcus_multilocularis_ 11 11
Echinococcus_granulosus_ 11 11
Taenia_solium_   (Pork tapeworm)   13 13
Schistosoma_mansoni_ 18 18
Mnemiopsis_leidyi   (Sea walnut)   147 143
Thelohanellus_kitauei 3 3
Acropora_digitifera_v1.0 65 61
Nematostella_vectensis_1.0   (Starlet sea anemone)   87 87
Hydra_vulgaris 42 42
Amphimedon_queenslandica 71 71
Trichoplax_adhaerens_ 65 65
Proterospongia_sp._ATCC_50818_ 91 90
Monosiga_brevicollis_ 83 83
Sphaeroforma_arctica_JP610_ 56 55
Capsaspora_owczarzaki_ATCC_30864_ 37 37
Conidiobolus_coronatus_NRRL28638_v1.0 29 29
Mortierella_verticillata_NRRL_6337_ 42 42
Phycomyces_blakesleeanus_ 32 32
Rhizopus_oryzae_RA_99-880_ 23 23
Mucor_circinelloides_ 31 31
Rhizomucor_miehei_CAU432_ 23 23
Malassezia_globosa_CBS_7966_ 16 16
Sporisorium_reilianum_22 32 31
Ustilago_maydis_ 27 26
Mixia_osmundae_IAM_14324_v1.0 24 24
Cronartium_quercuum_f._sp._fusiforme_G11_v1.0 24 24
Puccinia_graminis_f._sp._tritici_CRL_75-36-700-3_ 22 22
Melampsora_laricis-populina_ 34 34
Rhodotorula_graminis_WP1_v1.0 48 48
Sporobolomyces_roseus_IAM_13481_ 29 29
Microbotryum_violaceum_22 36 36
Wallemia_sebi_v1.0 25 25
Sphaerobolus_stellatus_v1.0 120 120
Piloderma_croceum_F_1598_v1.0 62 62
Serpula_lacrymans_var._lacrymans_S7.9_ 41 41
Coniophora_puteana 51 51
Hydnomerulius_pinastri_v2.0 49 49
Paxillus_rubicundulus_Ve08.2h10_v1.0 37 37
Pisolithus_microcarpus_441_v1.0 43 43
Pisolithus_tinctorius_Marx_270_v1.0 66 65
Scleroderma_citrinum_Foug_A_v1.0 55 55
Coprinopsis_cinerea_okayama7_130_v3 43 43
Pleurotus_ostreatus_   (Oyster mushroom)   58 57
Amanita_thiersii_Skay4041_v1.0 34 34
Amanita_muscaria_Koide_v1.0   (Fly agaric)   38 38
Galerina_marginata_v1.0 63 62
Hebeloma_cylindrosporum_h7_v2.0 47 47
Laccaria_bicolor_S238N-H82_ 54 54
Agaricus_bisporus_var._bisporus_ 36 36
Schizophyllum_commune_ 37 37
Stereum_hirsutum_FP-91666_SS1__v1.0 58 58
Heterobasidion_annosum_ 45 44
Gloeophyllum_trabeumv1.0 64 63
Punctularia_strigosozonata_v1.0 48 47
Sebacina_vermifera_MAFF_305830_v1.0 36 36
Fomitiporia_mediterranea_v1.0 51 51
Tulasnella_calospora_AL13/4D_v1.0 38 38
Postia_placenta_ 91 91
Wolfiporia_cocos_MD-104_SS10__v1.0 59 59
Fomitopsis_pinicolav1.0 57 57
Fomitopsis_pinicola_FP-58527_SS1_v3.0 59 59
Phanerochaete_chrysosporium_RP-78_2.1 52 51
Dichomitus_squalens 63 63
Trametes_versicolor_v1.0 50 50
Tremella_mesenterica_   (Witches' butter)   36 36
Daldinia_eschscholzii_EC12_v1.0 68 68
Apiospora_montagnei_NRRL_25634_v1.0 75 75
Magnaporthe_poae_ATCC_64411_22 42 41
Magnaporthe_grisea_70-15_ 55 55
Podospora_anserina_ 58 58
Sporotrichum_thermophile_ATCC_42464_ 40 40
Thielavia_terrestris_NRRL_8126_ 42 42
Chaetomium_globosum_CBS_148.51_ 41 41
Neurospora_tetrasperma_ 39 39
Neurospora_discreta_FGSC_8579_ 37 37
Neurospora_crassa_OR74A_ 42 41
Cryphonectria_parasitica_   (Chestnut blight fungus)   65 65
Verticillium_albo-atrum_VaMs.102_ 51 51
Verticillium_dahliae_VdLs.17_ 51 50
Acremonium_alcalophilumv_1.0 35 35
Glomerella_graminicola_22 68 68
Fusarium_graminearum_ 56 56
Nectria_haematococca_mpVI_ 87 87
Fusarium_oxysporum_f._sp._lycopersici_4286_ 73 73
Fusarium_verticillioides_7600_ 67 67
Trichoderma_asperellum_CBS_433.97_v1.0 59 59
Trichoderma_atroviride_ 54 54
Trichoderma_citrinoviride_v1.0 49 49
Trichoderma_reesei_1.2 47 47
Trichoderma_virens_Gv29-8_ 59 59
Trichoderma_longibrachiatum_ATCC_18648_v1.0 47 47
Trichoderma_harzianum_CBS_226.95_v1.0 59 59
Amorphotheca_resinae_v1.0   (Creosote fungus)   60 60
Botrytis_cinerea_B05.10_ 52 52
Sclerotinia_sclerotiorum_ 48 48
Blumeria_graminis_22 13 13
Didymella_exigua_CBS_183.55_v1.0 55 55
Leptosphaeria_maculans_22 39 39
Setosphaeria_turcica_v1.0 57 57
Cochliobolus_miyabeanus_ATCC_44560_v1.0 65 65
Cochliobolus_victoriae_FI3_v1.0 62 62
Cochliobolus_carbonum_26-R-13_v1.0 58 58
Cochliobolus_heterostrophus_   (Southern corn leaf blight pathogen)   57 57
Alternaria_brassicicola_ 39 39
Cochliobolus_lunatus_m118_v2.0 58 58
Pyrenophora_teres_f._teres_22 58 58
Pyrenophora_tritici-repentis_ 58 58
Stagonospora_nodorum_ 62 62
Mycosphaerella_graminicola_IPO323_ 47 47
Zasmidium_cellare_ATCC_36951_v1.0 101 101
Dothistroma_septosporum 55 55
Septoria_musiva_v1.0 45 45
Mycosphaerella_fijiensis_CIRAD86_ 59 59
Aureobasidium_pullulans_var._subglaciale_EXF-2481_v1.0 58 56
Paracoccidioides_brasiliensis_Pb18_ 28 28
Coccidioides_posadasii_RMSCC_3488_ 34 34
Coccidioides_immitis_RS_ 40 40
Ajellomyces_dermatitidis_SLH14081_ 32 32
Histoplasma_capsulatum_class_NAmI_strain_WU24_ 23 23
Microsporum_canis_CBS_113480_ 30 30
Trichophyton_equinum_CBS_127.97_ 28 28
Trichophyton_verrucosum_HKI_0517_ 31 30
Arthroderma_benhamiae_CBS_112371_ 32 31
Trichophyton_tonsurans_CBS_112818_ 31 31
Trichophyton_rubrum_CBS_118892_ 29 29
Uncinocarpus_reesii_1704_ 33 33
Aspergillus_zonatus_v1.0 44 44
Penicillium_chrysogenum_Wisconsin_54-1255_ 62 62
Penicillium_chrysogenum_v1.0 65 65
Aspergillus_acidus_v1.0 81 81
Aspergillus_fumigatus_Af293 53 53
Aspergillus_brasiliensis_v1.0 74 74
Aspergillus_nidulans_FGSC_A4_ 76 76
Aspergillus_sydowii_v1.0 92 92
Aspergillus_versicolor_v1.0 95 95
Aspergillus_glaucus 58 58
Aspergillus_carbonarius_ITEM_5010_ 71 71
Neosartorya_fischeri_NRRL_181_ 58 58
Aspergillus_terreus_NIH2624_ 52 52
Aspergillus_tubingensis_v1.0 81 81
Aspergillus_wentii_v1.0 81 81
Aspergillus_oryzae_RIB40_ 92 91
Aspergillus_niger_22 78 78
Aspergillus_niger_ATCC_1015_ 68 68
Aspergillus_flavus_NRRL3357_ 96 96
Aspergillus_clavatus_NRRL_1_ 50 50
Penicillium_marneffei_ATCC_18224_ 68 68
Tuber_melanosporum_Mel28_22 30 30
Tuber_melanosporum_Vittad_   (Perigord truffle)   32 32
Hansenula_polymorpha_v2.0 24 24
Dekkera_bruxellensis_CBS_2499_v2.0 14 14
Pichia_membranifaciensv1.0 24 24
Candida_tanzawaensis_NRRL_Y-17324__v1.0 20 20
Candida_dubliniensis_CD36_ 21 21
Candida_tropicalis_MYA-3404_ 19 19
Candida_parapsilosis_ 19 19
Candida_albicans_SC5314 20 20
Lodderomyces_elongisporus_NRRL_YB-4239_ 19 19
Babjeviella_inositovora_NRRL_Y-12698_v1.0 29 29
Pichia_stipitis_CBS_6054_ 29 29
Candida_guilliermondii_ATCC_6260_ 19 19
Hyphopichia_burtonii_NRRL_Y-1933_v1.0 29 29
Debaromyces_hansenii 26 26
Wickerhamomyces_anomalus 26 26
Pichia_pastoris_GS115_ 17 17
Hanseniaspora_valbyensis_NRRL_Y-1626_v1.1 9 9
Yarrowia_lipolytica_CLIB122 25 25
Candida_lusitaniae_ATCC_42720_ 19 19
Metschnikowia_bicuspidata_NRRL_YB-4993_v1.0 14 14
Vanderwaltozyma_polyspora_DSM_70294_ 3 3
Candida_glabrata_CBS138 4 4
Kluyveromyces_thermotolerans_CBS_6340 13 13
Lachancea_kluyveri_ 16 16
Kluyveromyces_waltii 13 13
Ashbya_gossypii_ATCC_10895_ 9 9
Zygosaccharomyces_rouxii_ 11 11
Saccharomyces_mikatae_MIT 7 7
Saccharomyces_paradoxus_MIT 8 8
Saccharomyces_cerevisiae_76   (Baker's yeast)   7 7
Saccharomyces_bayanus_MIT 8 8
Kluyveromyces_lactis 17 17
Schizosaccharomyces_cryophilus_OY26_22 20 20
Schizosaccharomyces_octosporus_yFS286_ 16 16
Schizosaccharomyces_japonicus_yFS275_ 8 8
Schizosaccharomyces_pombe   (Fission yeast)   12 12
Catenaria_anguillulae_PL171_v1.0 26 26
Allomyces_macrogynus_ATCC_38327_ 41 41
Spizellomyces_punctatus_DAOM_BR117_ 39 39
Dictyostelium_discoideum 37 37
Dictyostelium_purpureum_ 34 34
Selaginella_moellendorffii_ 197 196
Pinus_taeda   (Loblolly pine)   354 306
Picea_abies   (Norway spruce)   191 184
Eucalyptus_grandis_v201   (Rose gum)   352 351
Theobroma_cacao_B97-61/B2_v1   (Cacao)   183 181
Gossypium_raimondii_v221 525 524
Citrus_clementina_v165 259 259
Citrus_sinensis_v154   (Sweet orange)   284 283
Thellungiella_halophila_v173 143 142
Brassica_rapa_Chiifu-401_1.2   (Field mustard)   238 235
Capsella_rubella_v183 165 163
Arabidopsis_lyrata_   (Lyrate rockcress)   148 147
Arabidopsis_thaliana_10   (Thale cress)   192 192
Carica_papaya_   (Papaya)   117 117
Medicago_truncatula_   (Barrel medic)   362 359
Phaseolus_vulgaris_v186   (French bean)   194 194
Glycine_max_v109   (Soybean)   381 376
Cucumis_sativus_v122   (Cucumber)   147 147
Fragaria_vesca_   (Wild strawberry)   214 203
Malus_domestica_v196   (Apple)   431 410
Prunus_persica_v139   (Peach)   190 190
Linum_usitatissimum_v200   (Flax)   284 279
Manihot_esculenta_v147   (Cassava)   207 205
Populus_trichocarpa_v156   (Black cottonwood)   233 231
Vitis_vinifera_   (Wine grape)   203 193
Mimulus_guttatus_v140   (Spotted monkey flower)   170 170
Solanum_lycopersicum_v.2.3   (Tomato)   236 236
Solanum_tuberosum_   (Potato)   397 393
Actinidia_chinensis_Hongyang_ 234 219
Aquilegia_coerulea_v195 247 244
Triticum_urartu_22 181 171
Triticum_aestivum_22   (Bread wheat)   492 490
Aegilops_tauschii_22 212 201
Brachypodium_distachyon_   (Stiff brome)   144 144
Oryza_barthii_22   (African wild rice)   185 170
Oryza_meridionalis_22 201 178
Oryza_glumaepatula_22 202 179
Oryza_glaberrima   (African rice)   125 125
Oryza_punctata_22 223 196
Oryza_nivara_22 205 186
Oryza_brachyantha_22   (Malo sina)   123 122
Oryza_sativa_ssp._japonica_5.0   (Japanese rice)   206 205
Oryza_sativa_v193   (Rice)   206 205
Phyllostachys_heterocyclavar._pubescens   (Kikko-chiku)   118 115
Panicum_virgatum_v202   (Switchgrass)   340 339
Setaria_italica_v164   (Foxtail millet)   196 195
Zea_mays_subsp._mays_   (Maize)   230 229
Zea_mays_v181   (Maize)   246 245
Sorghum_bicolor_   (Sorghum)   163 158
Musa_balbisiana   (Balbis banana)   142 139
Musa_acuminata_22   (Wild Malaysian banana)   151 150
Amborella_trichopoda_22 170 168
Physcomitrella_patens 90 90
Coccomyxa_subellipsoidea_sp._C-169_v2 58 57
Asterochloris_sp._Cgr/DA1pho_v1.0 42 42
Chlorella_variabilis_sp._NC64A_ 52 52
Chlorella_vulgaris_ 55 55
Volvox_carteri_f._nagariensis_ 36 35
Volvox_carteri_v199 29 29
Chlamydomonas_reinhardtii_4.0 38 37
Ostreococcus_sp._RCC809_ 54 54
Ostreococcus_lucimarinus_CCE9901_ 60 60
Ostreococcus_tauri_ 55 55
Bathycoccus_prasinos_ 56 56
Micromonas_sp._RCC299_ 87 85
Micromonas_pusilla_CCMP1545_v3.0 82 82
Cyanidioschyzon_merolae_strain_10D_22 10 9
Cyanidioschyzon_merolae 10 9
Porphyridium_purpureum_02_2012 35 35
Thecamonas_trahens_ATCC_50062_ 64 64
Bigelowiella_natans_CCMP2755_22 178 173
Cyanophora_paradoxa_ 23 23
Leishmania_mexicana_2.4 20 20
Leishmania_major_strain_Friedlin_ 20 20
Leishmania_infantum_JPCM5_2.4 20 20
Leishmania_braziliensis_MHOM/BR/75/M2904_2.4 20 20
Trypanosoma_vivax_ 20 20
Trypanosoma_cruzi_strain_CL_Brener 14 14
Trypanosoma_congolense_2.4 23 23
Trypanosoma_brucei_gambiense_v4.1 23 23
Trypanosoma_brucei_TREU927_v4.1 27 27
Ectocarpus_siliculosus 60 59
Aureococcus_anophagefferens_ 166 162
Albugo_laibachii_22 67 67
Pythium_iwayamai_DAOM_BR242034_22 61 61
Pythium_arrhenomanes_ATCC_12531_22 51 51
Pythium_ultimum_v1.7-2 60 60
Pythium_aphanidermatum_DAOM_BR444_22 55 55
Pythium_irregulare_DAOM_BR486_22 58 58
Pythium_vexans_DAOM_BR484_22 57 57
Phytophthora_ramorum_1.1   (Sudden oak death agent)   62 61
Phytophthora_sojae_1.1 63 62
Phytophthora_infestans_T30-4_ 55 55
Phytophthora_capsici_ 62 62
Hyaloperonospora_arabidopsidis_22 40 40
Phaeodactylum_tricornutumCCAP_1055/1 77 77
Fragilariopsis_cylindrus 164 164
Thalassiosira_pseudonana_CCMP1335 74 74
Perkinsus_marinus_ATCC_50983_ 54 54
Paramecium_tetraurelia_ 38 38
Tetrahymena_thermophila_SB210_1_ 28 28
Ichthyophthirius_multifiliis_strain_G5_ 17 17
Cryptosporidium_hominis 2 2
Cryptosporidium_muris 1 1
Cryptosporidium_parvum_Iowa_II 3 3
Neospora_caninum 14 13
Toxoplasma_gondii_VEG 13 12
Toxoplasma_gondii_ME49 14 13
Toxoplasma_gondii_GT1 13 12
Babesia_bovis_T2Bo_ 6 6
Theileria_parva__ 4 4
Theileria_annulata 4 4
Plasmodium_falciparum_3D7_ 4 4
Plasmodium_vivax_SaI-1_7.0 5 4
Plasmodium_knowlesi_strain_H_ 5 4
Plasmodium_yoelii_ssp._yoelii_1_ 3 3
Plasmodium_chabaudi_ 3 3
Plasmodium_berghei_ANKA_ 3 3
Symbiodinium_minutum_clade_B1_v1.2 410 403
Naegleria_gruberi_ 64 56
Guillardia_theta_CCMP2712_v1.0_ 97 95
Emiliania_huxleyi_CCMP1516_ 378 370
Thermobaculum_terrenum_ATCC_BAA-798 3 3
Leptolyngbya_sp._PCC_7376 4 4
Pseudanabaena_sp._PCC_7367 8 8
Acaryochloris_marina_MBIC11017 18 18
Synechocystis_sp._PCC_6803 3 3
Synechococcus_sp._PCC_7502 4 4
Synechococcus_sp._PCC_6312 1 1
Synechococcus_sp._CC9311 1 1
Synechococcus_elongatus_PCC_7942 2 2
Microcoleus_sp._PCC_7113 12 12
Trichodesmium_erythraeum_IMS101 12 12
Cyanothece_sp._PCC_8802 6 6
Gloeocapsa_sp._PCC_7428 6 6
Halothece_sp._PCC_7418 2 2
Microcystis_aeruginosa_NIES-843 2 2
Gloeobacter_violaceus_PCC_7421 10 10
Rivularia_sp._PCC_7116 16 16
Calothrix_sp._PCC_7507 14 13
Anabaena_variabilis_ATCC_29413 11 11
'Nostoc_azollae'_0708 2 2
Nostoc_sp._PCC_7107 7 7
Nostoc_punctiforme_PCC_73102 19 19
Nostoc_sp._PCC_7120 7 7
Nostoc_sp._PCC_7524 4 4
Anabaena_sp._90 9 9
Mycoplasma_leachii_99/014/6 1 1
Mycoplasma_mycoides_subsp._capri_LC_str._95010 1 1
Mycoplasma_capricolum_subsp._capricolum_ATCC_27343 1 1
Mycoplasma_crocodyli_MP145 1 1
Mycoplasma_synoviae_53 1 1
Mycoplasma_pulmonis_UAB_CTIP 1 1
Mycoplasma_hyorhinis_GDL-1 2 2
Mycoplasma_hyopneumoniae_168 1 1
Mycoplasma_gallisepticum_str._F 1 1
Conexibacter_woesei_DSM_14684 3 3
Eggerthella_lenta_DSM_2243 1 1
Atopobium_parvulum_DSM_20469 1 1
Rubrobacter_xylanophilus_DSM_9941 1 1
Ilumatobacter_coccineus 30 30
Nakamurella_multipartita_DSM_44233 3 3
Acidothermus_cellulolyticus_11B 1 1
Modestobacter_marinus 6 6
Blastococcus_saxobsidens_DD2 3 3
Geodermatophilus_obscurus_DSM_43160 5 5
Kineococcus_radiotolerans_SRS30216 5 5
Catenulispora_acidiphila_DSM_44928 15 15
Stackebrandtia_nassauensis_DSM_44728 12 12
Frankia_symbiont_of_Datisca_glomerata 12 11
Frankia_sp._EAN1pec 23 23
Frankia_alni_ACN14a 22 22
Thermobifida_fusca_YX 2 2
Nocardiopsis_dassonvillei_subsp._dassonvillei_DSM_43111 6 6
Thermomonospora_curvata_DSM_43183 2 2
Streptosporangium_roseum_DSM_43021 13 13
Kitasatospora_setae_KM-6054 15 15
Streptomyces_coelicolor_A3(2) 9 9
Streptomyces_sp._PAMC26508 20 20
Streptomyces_flavogriseus_ATCC_33331 19 19
Streptomyces_sp._SirexAA-E 7 7
Streptomyces_griseus_subsp._griseus_NBRC_13350 15 15
Streptomyces_bingchenggensis_BCW-1 19 19
Streptomyces_violaceusniger_Tu_4113 8 8
Streptomyces_avermitilis_MA-4680 17 17
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 26 25
Streptomyces_scabiei_87.22 21 21
Streptomyces_hygroscopicus_subsp._jinggangensis_5008 27 27
Actinosynnema_mirum_DSM_43827 9 9
Saccharomonospora_viridis_DSM_43017 4 4
Pseudonocardia_dioxanivorans_CB1190 8 8
Saccharopolyspora_erythraea_NRRL_2338 11 11
Amycolatopsis_mediterranei_U32 13 13
Kribbella_flavida_DSM_17836 13 13
Nocardioides_sp._JS614 4 4
Microlunatus_phosphovorus_NM-1 7 7
Salinispora_arenicola_CNS-205 5 5
Salinispora_tropica_CNB-440 6 6
Verrucosispora_maris_AB-18-032 10 10
Micromonospora_sp._L5 8 8
Micromonospora_aurantiaca_ATCC_27029 9 9
Actinoplanes_sp._N902-109 13 13
Actinoplanes_sp._SE50/110 8 8
Actinoplanes_missouriensis_431 5 5
Segniliparus_rotundus_DSM_44985 4 4
Tsukamurella_paurometabola_DSM_20162 8 8
Gordonia_sp._KTR9 9 9
Gordonia_polyisoprenivorans_VH2 15 15
Gordonia_bronchialis_DSM_43247 8 8
Rhodococcus_jostii_RHA1 18 18
Rhodococcus_equi_103S 9 9
Rhodococcus_opacus_B4 12 12
Rhodococcus_erythropolis_PR4 14 14
Nocardia_cyriacigeorgica_GUH-2 5 5
Nocardia_farcinica_IFM_10152 10 10
Amycolicicoccus_subflavus_DQS3-9A1 3 3
Mycobacterium_massiliense_str._GO_06 7 7
Mycobacterium_abscessus_ATCC_19977 11 11
Mycobacterium_sp._JLS 9 9
Mycobacterium_intracellulare_ATCC_13950 9 9
Mycobacterium_avium_104 7 7
Mycobacterium_vanbaalenii_PYR-1 7 7
Mycobacterium_canettii_CIPT_140010059 6 6
Mycobacterium_africanum_GM041182 6 6
Mycobacterium_tuberculosis_KZN_1435 6 6
Mycobacterium_tuberculosis 6 6
Mycobacterium_bovis_BCG_str._Pasteur_1173P2 6 6
Mycobacterium_rhodesiae_NBB3 14 14
Mycobacterium_ulcerans_Agy99 5 5
Mycobacterium_gilvum_PYR-GCK 8 8
Mycobacterium_chubuense_NBB4 8 8
Mycobacterium_marinum_M 7 7
Mycobacterium_smegmatis_str._MC2_155 13 13
Mycobacterium_leprae_Br4923 2 2
Corynebacterium_efficiens_YS-314 1 1
Corynebacterium_ulcerans_0102 2 2
Corynebacterium_urealyticum_DSM_7109 1 1
Corynebacterium_variabile_DSM_44702 5 5
Corynebacterium_pseudotuberculosis_316 2 2
Corynebacterium_glutamicum_R 1 1
Corynebacterium_diphtheriae_NCTC_13129 2 2
Kytococcus_sedentarius_DSM_20547 5 5
Beutenbergia_cavernae_DSM_12333 5 5
Microbacterium_testaceum_StLB037 2 2
Clavibacter_michiganensis_subsp._michiganensis_NCPPB_382 1 1
Jonesia_denitrificans_DSM_20603 1 1
Intrasporangium_calvum_DSM_43043 2 2
Brachybacterium_faecium_DSM_4810 4 4
Arthrobacter_phenanthrenivorans_Sphe3 2 2
Arthrobacter_chlorophenolicus_A6 2 2
Arthrobacter_aurescens_TC1 3 3
Arthrobacter_arilaitensis_Re117 2 2
Kocuria_rhizophila_DC2201 1 1
Arthrobacter_sp._Rue61a 5 5
Arthrobacter_sp._FB24 1 1
Renibacterium_salmoninarum_ATCC_33209 2 2
Caldilinea_aerophila_DSM_14535_=_NBRC_104270 1 1
Herpetosiphon_aurantiacus_DSM_785 2 2
Deinococcus_deserti_VCD115 2 2
Deinococcus_maricopensis_DSM_21211 1 1
Veillonella_parvula_DSM_2008 1 1
Megasphaera_elsdenii_DSM_20460 1 1
Acidaminococcus_intestini_RyC-MR95 1 1
Acidaminococcus_fermentans_DSM_20731 1 1
Megamonas_hypermegale 2 2
Selenomonas_sputigena_ATCC_35185 1 1
Selenomonas_ruminantium_subsp._lactilytica_TAM6421 1 1
Erysipelothrix_rhusiopathiae_str._Fujisawa 1 1
Faecalibacterium_prausnitzii 2 2
Oscillibacter_valericigenes_Sjm18-20 1 1
Eubacterium_eligens_ATCC_27750 1 1
Eubacterium_limosum_KIST612 1 1
Clostridium_difficile_630 1 1
Clostridium_saccharolyticum_WM1 1 1
Eubacterium_rectale_M104/1 1 1
Clostridium_sp._BNL1100 1 1
Clostridium_perfringens_ATCC_13124 1 1
Clostridium_acetobutylicum_ATCC_824 1 1
Carnobacterium_sp._WN1359 1 1
Streptococcus_sp._I-P16 2 2
Streptococcus_sp._I-G2 2 2
Streptococcus_intermedius_JTH08 1 1
Streptococcus_pseudopneumoniae_IS7493 2 2
Streptococcus_equi_subsp._equi_4047 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_GGS_124 1 1
Streptococcus_macedonicus_ACA-DC_198 1 1
Streptococcus_mitis_B6 3 3
Streptococcus_uberis_0140J 1 1
Streptococcus_parasanguinis_ATCC_15912 2 2
Streptococcus_pneumoniae_P1031 3 3
Streptococcus_agalactiae_A909 2 2
Streptococcus_mutans_NN2025 1 1
Streptococcus_thermophilus_LMD-9 1 1
Streptococcus_suis_P1/7 1 1
Streptococcus_sanguinis_SK36 2 2
Streptococcus_oralis_Uo5 2 2
Streptococcus_gordonii_str._Challis_substr._CH1 2 2
Kyrpidia_tusciae_DSM_2912 1 1
Paenibacillus_sp._JDR-2 12 12
Paenibacillus_terrae_HPL-003 2 2
Paenibacillus_mucilaginosus_3016 8 8
Paenibacillus_polymyxa_M1 1 1
Halobacillus_halophilus_DSM_2266 2 2
Bacillus_sp._1NLA3E 2 2
Bacillus_amyloliquefaciens_FZB42 1 1
Bacillus_atrophaeus_1942 2 2
Bacillus_subtilis_subsp._subtilis_str._168 1 1
Bacillus_halodurans_C-125 1 1
Bacillus_weihenstephanensis_KBAB4 1 1
Bacillus_pseudofirmus_OF4 1 1
Bacillus_clausii_KSM-K16 1 1
Bacillus_megaterium_DSM_319 1 1
Staphylococcus_pseudintermedius_HKU10-03 1 1
Gemmatimonas_aurantiaca_T-27 1 1
Melioribacter_roseus_P3M 1 1
Ignavibacterium_album_JCM_16511 3 3
Chlorobium_limicola_DSM_245 1 1
Chloroherpeton_thalassium_ATCC_35110 1 1
Haliscomenobacter_hydrossis_DSM_1100 4 4
Saprospira_grandis_str._Lewin 5 5
Niastella_koreensis_GR20-10 8 8
Chitinophaga_pinensis_DSM_2588 16 16
Salinibacter_ruber_M8 1 1
Rhodothermus_marinus_DSM_4252 1 1
Flexibacter_litoralis_DSM_6794 6 6
Belliella_baltica_DSM_15883 2 2
Cyclobacterium_marinum_DSM_745 9 9
Marivirga_tractuosa_DSM_4126 2 2
Fibrella_aestuarina 10 10
Leadbetterella_byssophila_DSM_17132 5 5
Dyadobacter_fermentans_DSM_18053 13 13
Cytophaga_hutchinsonii_ATCC_33406 5 5
Spirosoma_linguale_DSM_74 11 11
Runella_slithyformis_DSM_19594 8 8
Parabacteroides_distasonis_ATCC_8503 1 1
Tannerella_forsythia_ATCC_43037 1 1
Paludibacter_propionicigenes_WB4 1 1
Odoribacter_splanchnicus_DSM_20712 1 1
Bacteroides_sp._CF50 1 1
Prevotella_melaninogenica_ATCC_25845 1 1
Prevotella_denticola_F0289 1 1
Prevotella_ruminicola_23 1 1
Alistipes_finegoldii_DSM_17242 1 1
Bacteroides_salanitronis_DSM_18170 1 1
Bacteroides_helcogenes_P_36-108 2 2
Bacteroides_vulgatus_ATCC_8482 1 1
Bacteroides_thetaiotaomicron_VPI-5482 1 1
Bacteroides_fragilis_YCH46 1 1
Pedobacter_saltans_DSM_12145 6 6
Solitalea_canadensis_DSM_3403 7 7
Pedobacter_heparinus_DSM_2366 13 13
Sphingobacterium_sp._21 5 5
Fluviicola_taffensis_DSM_16823 3 3
Owenweeksia_hongkongensis_DSM_17368 3 3
Zunongwangia_profunda_SM-A87 5 5
Krokinobacter_sp._4H-3-7-5 3 3
Gramella_forsetii_KT0803 5 5
Lacinutrix_sp._5H-3-7-4 5 5
Maribacter_sp._HTCC2170 9 9
Robiginitalea_biformata_HTCC2501 5 5
Croceibacter_atlanticus_HTCC2559 4 4
Aequorivita_sublithincola_DSM_14238 4 4
Zobellia_galactanivorans 7 7
Muricauda_ruestringensis_DSM_13258 4 4
Cellulophaga_algicola_DSM_14237 4 4
Cellulophaga_lytica_DSM_7489 5 5
Flavobacteriaceae_bacterium_3519-10 4 4
Polaribacter_sp._MED152 3 3
Ornithobacterium_rhinotracheale_DSM_15997 1 1
Capnocytophaga_canimorsus_Cc5 1 1
Weeksella_virosa_DSM_16922 2 2
Flavobacterium_indicum_GPTSA100-9 4 4
Flavobacterium_psychrophilum_JIP02/86 1 1
Flavobacterium_branchiophilum_FL-15 3 3
Flavobacterium_columnare_ATCC_49512 2 2
Flavobacterium_johnsoniae_UW101 11 11
Waddlia_chondrophila_WSU_86-1044 2 2
Candidatus_Protochlamydia_amoebophila_UWE25 5 5
Parachlamydia_acanthamoebae_UV-7 2 2
Simkania_negevensis_Z 4 4
Phycisphaera_mikurensis_NBRC_102666 8 8
Isosphaera_pallida_ATCC_43644 1 1
Planctomyces_brasiliensis_DSM_5305 11 11
Planctomyces_limnophilus_DSM_3776 4 4
Rhodopirellula_baltica_SH_1 4 4
Pirellula_staleyi_DSM_6068 4 4
Opitutus_terrae_PB90-1 1 1
Akkermansia_muciniphila_ATCC_BAA-835 1 1
Aminobacterium_colombiense_DSM_12261 1 1
Turneriella_parva_DSM_21527 2 2
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._L550 1 1
Leptospira_interrogans_serovar_Lai_str._IPAV 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Paris)' 4 4
Brachyspira_murdochii_DSM_12563 1 1
Brachyspira_intermedia_PWS/A 1 1
Brachyspira_pilosicoli_95/1000 1 1
Brachyspira_hyodysenteriae_WA1 1 1
Spirochaeta_smaragdinae_DSM_11293 1 1
Sphaerochaeta_pleomorpha_str._Grapes 3 3
Sphaerochaeta_globus_str._Buddy 3 3
Sphaerochaeta_coccoides_DSM_17374 1 1
Treponema_brennaborense_DSM_12168 1 1
Candidatus_Chloracidobacterium_thermophilum_B 2 2
Candidatus_Solibacter_usitatus_Ellin6076 4 4
Granulicella_tundricola_MP5ACTX9 1 1
Granulicella_mallensis_MP5ACTX8 5 5
Candidatus_Koribacter_versatilis_Ellin345 4 4
Terriglobus_saanensis_SP1PR4 6 6
Terriglobus_roseus_DSM_18391 2 2
Acidobacterium_capsulatum_ATCC_51196 1 1
Candidatus_Nitrospira_defluvii 8 8
Leptotrichia_buccalis_C-1013-b 1 1
Ilyobacter_polytropus_DSM_2926 1 1
Fusobacterium_nucleatum_subsp._nucleatum_ATCC_25586 1 1
Acidithiobacillus_ferrivorans_SS3 1 1
Acidithiobacillus_ferrooxidans_ATCC_53993 1 1
Bacteriovorax_marinus_SJ 6 6
Bdellovibrio_bacteriovorus_HD100 6 6
Nitratifractor_salsuginis_DSM_16511 1 1
Arcobacter_sp._L 4 4
Arcobacter_nitrofigilis_DSM_7299 2 2
Arcobacter_butzleri_RM4018 2 2
Campylobacter_jejuni_subsp._doylei_269.97 1 1
Sulfurimonas_denitrificans_DSM_1251 1 1
Wolinella_succinogenes_DSM_1740 1 1
Helicobacter_cetorum_MIT_00-7128 2 2
Helicobacter_bizzozeronii_CIII-1 2 2
Helicobacter_hepaticus_ATCC_51449 1 1
Helicobacter_mustelae_12198 1 1
Helicobacter_felis_ATCC_49179 2 2
Helicobacter_cinaedi_PAGU611 2 1
Helicobacter_acinonychis_str._Sheeba 1 1
Helicobacter_pylori_B38 1 1
Sulfurovum_sp._NBC37-1 1 1
Desulfotalea_psychrophila_LSv54 1 1
Desulfovibrio_piezophilus 1 1
Desulfovibrio_aespoeensis_Aspo-2 1 1
Lawsonia_intracellularis_PHE/MN1-00 1 1
Desulfovibrio_vulgaris_subsp._vulgaris_DP4 1 1
Desulfovibrio_africanus_str._Walvis_Bay 1 1
Geobacter_sulfurreducens_KN400 1 1
Haliangium_ochraceum_DSM_14365 19 19
Sorangium_cellulosum_'So_ce_56' 17 17
Anaeromyxobacter_sp._Fw109-5 1 1
Anaeromyxobacter_dehalogenans_2CP-1 2 2
Stigmatella_aurantiaca_DW4/3-1 25 25
Corallococcus_coralloides_DSM_2259 19 19
Myxococcus_xanthus_DK_1622 21 21
Myxococcus_fulvus_HW-1 18 18
Azoarcus_sp._KH32C 3 3
Azoarcus_sp._BH72 4 4
Dechlorosoma_suillum_PS 2 2
Pseudogulbenkiania_sp._NH8B 9 9
Laribacter_hongkongensis_HLHK9 2 2
Chromobacterium_violaceum_ATCC_12472 6 6
Neisseria_meningitidis_alpha14 3 3
Neisseria_meningitidis_FAM18 3 3
Neisseria_lactamica_020-06 1 1
Neisseria_gonorrhoeae_NCCP11945 2 2
beta_proteobacterium_CB 3 3
Methylibium_petroleiphilum_PM1 6 6
Thiomonas_arsenitoxydans 7 7
Thiomonas_intermedia_K12 4 4
Rubrivivax_gelatinosus_IL144 4 4
Leptothrix_cholodnii_SP-6 5 5
Burkholderia_rhizoxinica_HKI_454 8 8
Burkholderia_phytofirmans_PsJN 15 15
Burkholderia_phymatum_STM815 16 16
Burkholderia_xenovorans_LB400 28 28
Ralstonia_eutropha_JMP134 22 22
Cupriavidus_taiwanensis_LMG_19424 13 13
Cupriavidus_metallidurans_CH34 17 17
Cupriavidus_necator_N-1 22 22
Ralstonia_eutropha_H16 22 22
Ralstonia_pickettii_12D 12 12
Ralstonia_solanacearum_CFBP2957 7 7
Polynucleobacter_necessarius_subsp._asymbioticus_QLW-P1DMWA-1 4 4
Burkholderia_sp._RPE64 18 18
Burkholderia_sp._CCGE1002 11 11
Burkholderia_thailandensis_E264 18 18
Burkholderia_pseudomallei_1106a 26 26
Burkholderia_mallei_SAVP1 12 12
Burkholderia_ambifaria_AMMD 21 21
Burkholderia_cenocepacia_HI2424 22 22
Burkholderia_multivorans_ATCC_17616 16 16
Burkholderia_vietnamiensis_G4 15 15
Burkholderia_gladioli_BSR3 18 18
Burkholderia_glumae_BGR1 22 22
Verminephrobacter_eiseniae_EF01-2 4 4
Alicycliphilus_denitrificans_K601 4 4
Ramlibacter_tataouinensis_TTB310 6 6
Delftia_sp._Cs1-4 12 12
Delftia_acidovorans_SPH-1 12 12
Polaromonas_sp._JS666 5 5
Polaromonas_naphthalenivorans_CJ2 2 2
Variovorax_paradoxus_S110 12 12
Rhodoferax_ferrireducens_T118 2 2
Acidovorax_ebreus_TPSY 4 4
Acidovorax_sp._KKS102 6 6
Acidovorax_sp._JS42 3 3
Acidovorax_citrulli_AAC00-1 7 7
Acidovorax_avenae_subsp._avenae_ATCC_19860 12 12
Comamonas_testosteroni_CNB-2 14 14
Herminiimonas_arsenicoxydans 5 5
Collimonas_fungivorans_Ter331 22 21
Janthinobacterium_sp._Marseille 8 8
Herbaspirillum_seropedicae_SmR1 11 11
Pusillimonas_sp._T7-7 4 4
Advenella_kashmirensis_WT001 11 11
Taylorella_asinigenitalis_MCE3 1 1
Taylorella_equigenitalis_MCE9 1 1
Bordetella_petrii_DSM_12804 11 11
Bordetella_avium_197N 9 9
Bordetella_pertussis_Tohama_I 8 8
Bordetella_parapertussis_12822 9 9
Bordetella_bronchiseptica_RB50 10 10
Achromobacter_xylosoxidans_A8 16 16
Achromobacter_xylosoxidans 12 12
Thiobacillus_denitrificans_ATCC_25259 5 5
Nitrosospira_multiformis_ATCC_25196 3 3
Nitrosomonas_sp._Is79A3 1 1
Nitrosomonas_eutropha_C91 1 1
Sideroxydans_lithotrophicus_ES-1 4 4
Gallionella_capsiferriformans_ES-2 2 2
Methylotenera_versatilis_301 5 5
Methylotenera_mobilis_JLW8 4 4
Methylovorus_sp._MP688 4 4
Methylovorus_glucosetrophus_SIP3-4 4 4
Methylobacillus_flagellatus_KT 5 5
Magnetococcus_marinus_MC-1 1 1
Parvularcula_bermudensis_HTCC2503 3 3
Asticcacaulis_excentricus_CB_48 11 11
Brevundimonas_subvibrioides_ATCC_15264 6 6
Caulobacter_sp._K31 22 22
Caulobacter_crescentus_NA1000 5 5
Caulobacter_segnis_ATCC_21756 11 11
Phenylobacterium_zucineum_HLK1 13 13
Erythrobacter_litoralis_HTCC2594 9 9
Sphingopyxis_alaskensis_RB2256 13 13
Novosphingobium_sp._PP1Y 14 14
Novosphingobium_aromaticivorans_DSM_12444 9 9
Sphingobium_sp._SYK-6 23 23
Sphingobium_japonicum_UT26S 12 12
Sphingobium_chlorophenolicum_L-1 15 15
Sphingomonas_sp._MM-1 15 15
Sphingomonas_wittichii_RW1 22 22
Maricaulis_maris_MCS10 5 5
Hirschia_baltica_ATCC_49814 10 10
Hyphomonas_neptunium_ATCC_15444 7 7
Dinoroseobacter_shibae_DFL_12 5 5
Phaeobacter_gallaeciensis_2.10 7 7
Pseudovibrio_sp._FO-BEG1 10 10
Jannaschia_sp._CCS1 9 9
Ruegeria_sp._TM1040 7 7
Ruegeria_pomeroyi_DSS-3 9 9
Ketogulonicigenium_vulgare_Y25 1 1
Ketogulonigenium_vulgarum_WSH-001 1 1
Roseobacter_litoralis_Och_149 7 7
Roseobacter_denitrificans_OCh_114 9 9
Rhodobacter_capsulatus_SB_1003 1 1
Paracoccus_denitrificans_PD1222 4 4
Tistrella_mobilis_KA081020-065 12 12
Magnetospirillum_magneticum_AMB-1 4 4
Rhodospirillum_centenum_SW 1 1
Rhodospirillum_rubrum_F11 2 2
Azospirillum_lipoferum_4B 7 7
Azospirillum_sp._B510 9 9
Azospirillum_brasilense_Sp245 8 8
Gluconacetobacter_xylinus_NBRC_3288 4 4
Gluconacetobacter_diazotrophicus_PAl_5 4 4
Acidiphilium_multivorum_AIU301 2 2
Acidiphilium_cryptum_JF-5 2 2
Gluconobacter_oxydans_621H 3 3
Acetobacter_pasteurianus_IFO_3283-01 6 6
Polymorphum_gilvum_SL003B-26A1 7 7
Micavibrio_aeruginosavorus_ARL-13 1 1
Candidatus_Puniceispirillum_marinum_IMCC1322 11 11
alpha_proteobacterium_HIMB5 8 8
alpha_proteobacterium_HIMB59 4 4
Candidatus_Pelagibacter_sp._IMCC9063 5 5
Wolbachia_sp._wRi 2 2
Rickettsia_bellii_OSU_85-389 2 2
Rickettsia_felis_URRWXCal2 2 2
Rickettsia_akari_str._Hartford 1 1
Starkeya_novella_DSM_506 2 2
Xanthobacter_autotrophicus_Py2 4 4
Azorhizobium_caulinodans_ORS_571 2 2
Methylobacterium_chloromethanicum_CM4 2 2
Methylobacterium_extorquens_AM1 2 2
Methylobacterium_sp._4-46 6 6
Methylobacterium_populi_BJ001 3 3
Methylobacterium_nodulans_ORS_2060 9 9
Methylobacterium_radiotolerans_JCM_2831 5 5
Parvibaculum_lavamentivorans_DS-1 18 18
Ochrobactrum_anthropi_ATCC_49188 3 3
Brucella_microti_CCM_4915 2 2
Brucella_pinnipedialis_B2/94 1 1
Brucella_canis_ATCC_23365 1 1
Brucella_suis_ATCC_23445 1 1
Brucella_melitensis_ATCC_23457 1 1
Brucella_ovis_ATCC_25840 1 1
Brucella_abortus_S19 2 2
Sinorhizobium_fredii_NGR234 2 2
Sinorhizobium_medicae_WSM419 4 4
Sinorhizobium_meliloti_AK83 4 4
Rhizobium_etli_CIAT_652 5 5
Rhizobium_leguminosarum_bv._viciae_3841 7 7
Agrobacterium_tumefaciens_str._C58 1 1
Agrobacterium_radiobacter_K84 10 10
Agrobacterium_vitis_S4 9 9
Mesorhizobium_sp._BNC1 2 2
Mesorhizobium_opportunistum_WSM2075 10 10
Mesorhizobium_ciceri_biovar_biserrulae_WSM1271 11 11
Mesorhizobium_loti_MAFF303099 14 14
Methylocella_silvestris_BL2 6 6
Beijerinckia_indica_subsp._indica_ATCC_9039 6 6
Pelagibacterium_halotolerans_B2 2 2
Rhodomicrobium_vannielii_ATCC_17100 1 1
Hyphomicrobium_sp._MC1 3 3
Hyphomicrobium_denitrificans_ATCC_51888 1 1
Oligotropha_carboxidovorans_OM4 3 3
Rhodopseudomonas_palustris_BisA53 1 1
Nitrobacter_winogradskyi_Nb-255 2 2
Nitrobacter_hamburgensis_X14 5 5
Bradyrhizobium_japonicum_USDA_110 10 10
Bradyrhizobium_sp._ORS_278 11 11
Methylocystis_sp._SC2 2 2
Bartonella_tribocorum_CIP_105476 1 1
Bartonella_bacilliformis_KC583 1 1
Saccharophagus_degradans_2-40 9 9
Teredinibacter_turnerae_T7901 13 13
Cellvibrio_japonicus_Ueda107 11 11
Aggregatibacter_aphrophilus_NJ8700 3 3
Aggregatibacter_actinomycetemcomitans_D7S-1 3 3
Haemophilus_somnus_129PT 1 1
Gallibacterium_anatis_UMN179 4 4
Pasteurella_multocida_subsp._multocida_str._3480 4 4
Haemophilus_parasuis_SH0165 3 3
Haemophilus_ducreyi_35000HP 2 2
Haemophilus_parainfluenzae_T3T1 3 3
Haemophilus_influenzae_PittEE 3 3
Actinobacillus_succinogenes_130Z 4 4
Actinobacillus_pleuropneumoniae_serovar_5b_str._L20 3 3
Oceanimonas_sp._GK1 6 6
Tolumonas_auensis_DSM_9187 4 4
Aeromonas_veronii_B565 5 5
Aeromonas_salmonicida_subsp._salmonicida_A449 6 6
Aeromonas_hydrophila_subsp._hydrophila_ATCC_7966 9 9
Aliivibrio_salmonicida_LFI1238 8 8
Vibrio_fischeri_MJ11 6 6
Vibrio_sp._Ex25 4 4
Vibrio_harveyi_ATCC_BAA-1116 4 4
Vibrio_parahaemolyticus_RIMD_2210633 4 4
Vibrio_splendidus_LGP32 6 6
Vibrio_anguillarum_775 2 2
Vibrio_furnissii_NCTC_11218 6 6
Vibrio_vulnificus_MO6-24/O 5 5
Vibrio_cholerae_O395 4 4
Photobacterium_profundum_SS9 8 8
Psychromonas_ingrahamii_37 5 5
Psychromonas_sp._CNPT3 5 5
Idiomarina_loihiensis_L2TR 4 4
Ferrimonas_balearica_DSM_9799 3 3
Shewanella_piezotolerans_WP3 8 8
Shewanella_loihica_PV-4 6 6
Shewanella_halifaxensis_HAW-EB4 6 6
Shewanella_sediminis_HAW-EB3 6 6
Shewanella_denitrificans_OS217 4 4
Shewanella_pealeana_ATCC_700345 7 7
Shewanella_oneidensis_MR-1 7 7
Shewanella_baltica_OS185 10 10
Shewanella_woodyi_ATCC_51908 8 8
Shewanella_sp._MR-4 5 5
Shewanella_amazonensis_SB2B 5 5
Shewanella_violacea_DSS12 8 8
Shewanella_frigidimarina_NCIMB_400 7 7
Shewanella_putrefaciens_CN-32 8 8
Colwellia_psychrerythraea_34H 9 9
Pseudoalteromonas_sp._SM9913 4 4
Pseudoalteromonas_atlantica_T6c 12 12
Pseudoalteromonas_haloplanktis_TAC125 5 5
Glaciecola_sp._4H-3-7+YE-5 16 16
Glaciecola_nitratireducens_FR1064 9 9
Marinobacter_adhaerens_HP15 6 6
Marinobacter_sp._BSs20148 8 8
Marinobacter_hydrocarbonoclasticus_ATCC_49840 4 4
Marinobacter_aquaeolei_VT8 5 5
Alteromonas_sp._SN2 9 9
Alteromonas_macleodii_str._'Deep_ecotype' 4 4
Kangiella_koreensis_DSM_16069 2 2
Hahella_chejuensis_KCTC_2396 21 21
Alcanivorax_borkumensis_SK2 4 4
Marinomonas_posidonica_IVIA-Po-181 9 9
Marinomonas_sp._MWYL1 10 10
Marinomonas_mediterranea_MMB-1 18 18
Chromohalobacter_salexigens_DSM_3043 11 11
Halomonas_elongata_DSM_2581 10 10
Methylomicrobium_alcaliphilum 3 3
Methylomonas_methanica_MC09 4 4
Methylococcus_capsulatus_str._Bath 1 1
Dichelobacter_nodosus_VCS1703A 1 1
Rhodanobacter_denitrificans 8 8
Frateuria_aurantia_DSM_6220 8 8
Pseudoxanthomonas_spadix_BD-a59 6 6
Pseudoxanthomonas_suwonensis_11-1 5 5
Stenotrophomonas_maltophilia_K279a 5 5
Xylella_fastidiosa_M23 5 5
Xanthomonas_axonopodis_pv._citri_str._306 10 10
Xanthomonas_albilineans_GPE_PC73 7 7
Xanthomonas_oryzae_pv._oryzae_PXO99A 7 7
Xanthomonas_campestris_pv._campestris_str._B100 11 11
Halothiobacillus_neapolitanus_c2 5 5
Alkalilimnicola_ehrlichii_MLHE-1 2 2
Thioalkalivibrio_sulfidophilus_HL-EbGr7 2 2
Thioalkalivibrio_sp._K90mix 1 1
Allochromatium_vinosum_DSM_180 1 1
Thiocystis_violascens_DSM_198 1 1
Nitrosococcus_watsonii_C-113 2 2
Nitrosococcus_halophilus_Nc4 3 3
Nitrosococcus_oceani_ATCC_19707 2 2
Legionella_longbeachae_NSW150 13 13
Legionella_pneumophila_str._Corby 10 10
gamma_proteobacterium_HdN1 3 3
Candidatus_Ruthia_magnifica_str._Cm_(Calyptogena_magnifica) 1 1
Candidatus_Vesicomyosocius_okutanii_HA 1 1
Photorhabdus_asymbiotica 11 11
Photorhabdus_luminescens_subsp._laumondii_TTO1 18 18
Xenorhabdus_bovienii_SS-2004 9 9
Xenorhabdus_nematophila_ATCC_19061 13 13
Providencia_stuartii_MRSN_2154 3 3
Proteus_mirabilis_HI4320 4 4
Edwardsiella_ictaluri_93-146 3 3
Edwardsiella_tarda_EIB202 4 4
Rahnella_sp._Y9602 11 11
Rahnella_aquatilis_CIP_78.65_=_ATCC_33071 7 7
Yersinia_pseudotuberculosis_IP_31758 9 9
Yersinia_pestis_Pestoides_F 8 8
Yersinia_enterocolitica_subsp._enterocolitica_8081 11 11
Serratia_sp._AS12 15 15
Serratia_sp._ATCC_39006 14 14
Serratia_plymuthica_AS9 15 15
Serratia_proteamaculans_568 16 16
Dickeya_dadantii_Ech703 9 9
Dickeya_zeae_Ech1591 10 10
Pectobacterium_wasabiae_WPP163 10 10
Pectobacterium_sp._SCC3193 10 10
Pectobacterium_atrosepticum_SCRI1043 8 8
Pectobacterium_carotovorum_subsp._carotovorum_PC1 11 11
Sodalis_glossinidius_str._'morsitans' 2 2
Halyomorpha_halys_symbiont 1 1
Pantoea_sp._At-9b 14 14
Pantoea_vagans_C9-1 8 8
Pantoea_ananatis_LMG_20103 11 11
Erwinia_tasmaniensis_Et1/99 6 6
Erwinia_sp._Ejp617 6 6
Erwinia_billingiae_Eb661 10 10
Erwinia_pyrifoliae_Ep1/96 4 4
Erwinia_amylovora_ATCC_49946 6 6
Escherichia_blattae_DSM_4481 13 13
Cronobacter_turicensis_z3032 8 8
Cronobacter_sakazakii_ES15 8 8
Candidatus_Hamiltonella_defensa_5AT_(Acyrthosiphon_pisum) 4 4
Enterobacteriaceae_bacterium_strain_FGI_57 15 15
Shigella_sonnei_Ss046 9 9
Shigella_flexneri_5_str._8401 9 9
Shigella_dysenteriae_Sd197 8 8
Shigella_boydii_CDC_3083-94 9 9
Salmonella_bongori_NCTC_12419 9 9
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_C_strain_RKS4594 10 10
Klebsiella_oxytoca_E718 18 18
Klebsiella_variicola_At-22 18 18
Klebsiella_pneumoniae_NTUH-K2044 14 14
Enterobacter_aerogenes_KCTC_2190 15 15
Escherichia_fergusonii_ATCC_35469 9 9
Escherichia_coli_'BL21-Gold(DE3)pLysS_AG' 11 11
Enterobacter_sp._R4-368 8 8
Enterobacter_sp._638 9 9
Enterobacter_asburiae_LF7a 13 13
Enterobacter_cloacae_subsp._dissolvens_SDM 9 9
Citrobacter_rodentium_ICC168 8 8
Citrobacter_koseri_ATCC_BAA-895 9 9
Azotobacter_vinelandii_DJ 20 20
Pseudomonas_sp._TKP 13 13
Pseudomonas_sp._UW4 16 16
Pseudomonas_brassicacearum_subsp._brassicacearum_NFM421 18 18
Pseudomonas_entomophila_L48 15 15
Pseudomonas_syringae_pv._tomato_str._DC3000 10 10
Pseudomonas_stutzeri_A1501 8 8
Pseudomonas_fulva_12-X 5 5
Pseudomonas_putida_F1 13 13
Pseudomonas_protegens_Pf-5 16 16
Pseudomonas_fluorescens_SBW25 15 15
Pseudomonas_mendocina_ymp 6 6
Pseudomonas_aeruginosa_UCBPP-PA14 15 15
Pseudomonas_sp._VLB120 14 14
Psychrobacter_sp._G 3 3
Psychrobacter_sp._PRwf-1 5 5
Psychrobacter_arcticus_273-4 3 3
Psychrobacter_cryohalolentis_K5 3 3
Moraxella_catarrhalis_RH4 4 4
Acinetobacter_oleivorans_DR1 12 12
Acinetobacter_calcoaceticus_PHEA-2 11 11
Acinetobacter_baumannii_ATCC_17978 5 5
Acinetobacter_sp._ADP1 13 13
Methylophaga_sp._JAM1 4 4
Cycloclasticus_sp._P1 2 2
Thiomicrospira_crunogena_XCL-2 1 1
Thioalkalimicrobium_cyclicum_ALM1 2 2
Francisella_noatunensis_subsp._orientalis_str._Toba_04 2 2
Francisella_sp._TX077308 2 2
Francisella_philomiragia_subsp._philomiragia_ATCC_25017 3 3
Francisella_tularensis_subsp._tularensis_WY96-3418 2 2
Francisella_cf._novicida_3523 4 3
Francisella_novicida_U112 1 1
Candidatus_Nitrosopumilus_sp._AR2 1 1
Nitrosopumilus_maritimus_SCM1 1 1
Halomicrobium_mukohataei_DSM_12286 1 1
Halalkalicoccus_jeotgali_B3 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Strains
Genome     Number   Proteins
Xenopus_(Silurana)_tropicalis_v7.1_(annotation_v7.2)   (Tropical clawed frog)   72 71
Drosophila_melanogaster_FlyBase_5.12_(FlyBase)   (Fruit fly)   40 40
Anopheles_gambiae_VectorBase_AgamP3.6__(VectorBase)   (African malaria mosquito)   28 28
Ascaris_suum_Victoria/Ghent_   (Pig roundworm)   21 20
Caenorhabditis_elegans_WormBase_WS218__(WormBase)   (Roundworm)   34 34
Cryptococcus_neoformans_var._grubii_H99_ 44 44
Cryptococcus_neoformans_B-3501A_ 43 43
Cryptococcus_neoformans_JEC21_ 33 33
Paracoccidioides_brasiliensis_Pb01_ 29 29
Paracoccidioides_brasiliensis_Pb03_ 28 28
Coccidioides_posadasii_str._Silveira_ 40 40
Coccidioides_immitis_RMSCC_3703_ 34 33
Coccidioides_immitis_RMSCC_2394_ 34 34
Coccidioides_immitis_H538.4_ 35 35
Ajellomyces_dermatitidis_ER-3_ 31 31
Histoplasma_capsulatum_H143 25 25
Histoplasma_capsulatum_H88 26 26
Histoplasma_capsulatum_G186AR 29 29
Aspergillus_fumigatus_A1163_ 53 53
Candida_albicans_WO-1_ 22 22
Saccharomyces_cerevisiae_UC5 6 6
Saccharomyces_cerevisiae_PW5 7 7
Saccharomyces_cerevisiae_FL100 4 4
Saccharomyces_cerevisiae_CLIB382 1 1
Saccharomyces_cerevisiae_CLIB324 2 2
Saccharomyces_cerevisiae_CBS7960 6 6
Saccharomyces_cerevisiae_YJM269 6 6
Saccharomyces_cerevisiae_T7 7 7
Saccharomyces_cerevisiae_FostersB 6 6
Saccharomyces_cerevisiae_FostersO 6 6
Saccharomyces_cerevisiae_VL3 6 6
Saccharomyces_cerevisiae_Vin13 6 6
Saccharomyces_cerevisiae_LalvinQA23 4 4
Saccharomyces_cerevisiae_AWRI796 6 6
Saccharomyces_cerevisiae_Sigma1278b 7 7
Saccharomyces_cerevisiae_W303 7 7
Saccharomyces_cerevisiae_JAY291 7 7
Saccharomyces_cerevisiae_AWRI1631 5 5
Saccharomyces_cerevisiae_YPS163 3 3
Saccharomyces_cerevisiae_T73 4 4
Saccharomyces_cerevisiae_CLIB215 3 3
Saccharomyces_cerevisiae_Y10 3 3
Saccharomyces_cerevisiae_YJM789_ 7 7
Saccharomyces_cerevisiae_YJM789 7 7
Saccharomyces_cerevisiae_RM11-1a 7 7
Saccharomyces_cerevisiae_RM11-1a_ 6 6
Saccharomyces_cerevisiae_SGD_(SGD)   (Baker's yeast)   7 7
Schizosaccharomyces_pombe_972h-_ 12 12
Batrachochytrium_dendrobatidis_JEL423_ 20 20
Batrachochytrium_dendrobatidis_JAM81_ 23 23
Theobroma_cacao_Matina_1-6_v0.9   (Cacao)   180 176
Hordeum_vulgare_22   (Domesticated barley)   315 315
Oryza_sativa_ssp._Indica_(Subspecies)   (Long-grained rice)   172 166
Trypanosoma_brucei_Lister_427_v4.1 22 22
Neospora_caninum_Nc-Liverpool_6.2 14 13
Plasmodium_falciparum_HB3_ 4 4
Plasmodium_falciparum_Dd2_ 3 3
Chroococcidiopsis_thermalis_PCC_7203 10 10
Chamaesiphon_minutus_PCC_6605 9 9
Synechocystis_sp._PCC_6803 3 3
Cyanobium_gracile_PCC_6307 5 5
Dactylococcopsis_salina_PCC_8305 2 2
Synechococcus_sp._JA-2-3B'a(2-13) 3 3
Synechococcus_sp._JA-3-3Ab 2 2
Synechococcus_sp._CC9902 5 5
Synechococcus_sp._RCC307 2 2
Synechococcus_sp._CC9605 4 4
Synechococcus_sp._WH_8102 5 5
Synechococcus_sp._WH_7803 2 2
Synechococcus_sp._PCC_7002 2 2
Synechococcus_elongatus_PCC_6301 2 2
Prochlorococcus_marinus_str._MIT_9301 3 3
Prochlorococcus_marinus_str._AS9601 1 1
Prochlorococcus_marinus_subsp._marinus_str._CCMP1375 2 2
Prochlorococcus_marinus_str._MIT_9215 3 3
Prochlorococcus_marinus_str._MIT_9211 1 1
Prochlorococcus_marinus_str._MIT_9313 3 3
Prochlorococcus_marinus_str._MIT_9312 1 1
Prochlorococcus_marinus_str._MIT_9303 9 9
Crinalium_epipsammum_PCC_9333 6 6
Oscillatoria_nigro-viridis_PCC_7112 6 6
Oscillatoria_acuminata_PCC_6304 9 9
Arthrospira_platensis_NIES-39 6 6
Cyanothece_sp._PCC_7822 9 9
Cyanothece_sp._PCC_7425 9 9
Cyanothece_sp._PCC_7424 5 5
Cyanothece_sp._PCC_8801 6 6
Cyanobacterium_aponinum_PCC_10605 2 2
Cyanobacterium_stanieri_PCC_7202 1 1
Gloeobacter_kilaueensis_Gloeobacter_sp._JS 9 9
Pleurocapsa_minor_Pleurocapsa_sp._PCC_7327 3 3
Stanieria_cyanosphaera_PCC_7437 5 5
Calothrix_parietina_Calothrix_sp._PCC_6303 8 8
Cylindrospermum_stagnale_PCC_7417 18 18
Anabaena_cylindrica_PCC_7122 7 7
Mycoplasma_leachii_PG50 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._Gladysdale 1 1
Mycoplasma_mycoides_subsp._mycoides_SC_str._PG1 1 1
Mycoplasma_hyorhinis_SK76 2 2
Mycoplasma_hyorhinis_MCLD 2 2
Mycoplasma_hyorhinis_HUB-1 2 2
Mycoplasma_hyorhinis_DBS_1050 2 2
Mycoplasma_hyopneumoniae_168-L 1 1
Mycoplasma_hyopneumoniae_7422 1 1
Mycoplasma_hyopneumoniae_232 1 1
Mycoplasma_hyopneumoniae_7448 1 1
Mycoplasma_hyopneumoniae_J 1 1
Mycoplasma_gallisepticum_NC08_2008.031-4-3P 1 1
Mycoplasma_gallisepticum_CA06_2006.052-5-2P 1 1
Mycoplasma_gallisepticum_NC06_2006.080-5-2P 1 1
Mycoplasma_gallisepticum_WI01_2001.043-13-2P 1 1
Mycoplasma_gallisepticum_NY01_2001.047-5-1P 1 1
Mycoplasma_gallisepticum_NC96_1596-4-2P 1 1
Mycoplasma_gallisepticum_NC95_13295-2-2P 1 1
Mycoplasma_gallisepticum_VA94_7994-1-7P 1 1
Mycoplasma_gallisepticum_S6 1 1
Mycoplasma_gallisepticum_str._R(high) 1 1
Mycoplasma_gallisepticum_str._R(low) 1 1
Gordonibacter_pamelaeae_7-10-1-b 1 1
Frankia_sp._EuI1c 34 34
Frankia_sp._CcI3 11 11
Nocardiopsis_alba_ATCC_BAA-2165 7 7
Streptomyces_albus_J1074 8 8
Streptomyces_rapamycinicus_NRRL_5491 13 13
Streptomyces_davawensis_JCM_4913 21 21
Streptomyces_fulvissimus_DSM_40593 7 7
Streptomyces_venezuelae_ATCC_10712 9 9
Streptomyces_collinus_Tu_365 17 17
Streptomyces_cattleya_NRRL_8057_=_DSM_46488 26 25
Streptomyces_hygroscopicus_subsp._jinggangensis_TL01 27 27
Saccharothrix_espanaensis_DSM_44229 10 10
Amycolatopsis_mediterranei_RB 13 13
Amycolatopsis_mediterranei_S699 13 13
Amycolatopsis_mediterranei_S699 13 13
Amycolatopsis_orientalis_HCCB10007 12 12
Actinoplanes_friuliensis_DSM_7358 9 9
Rhodococcus_pyridinivorans_SB3094 8 8
Rhodococcus_erythropolis_CCM2595 15 15
Nocardia_brasiliensis_ATCC_700358 16 16
Mycobacterium_sp._MOTT36Y 9 9
Mycobacterium_sp._JDM601 6 6
Mycobacterium_abscessus_subsp._bolletii_50594 9 9
Mycobacterium_liflandii_128FXT 6 6
Mycobacterium_sp._KMS 9 9
Mycobacterium_sp._MCS 9 9
Mycobacterium_yongonense_05-1390 10 10
Mycobacterium_intracellulare_MOTT-64 9 9
Mycobacterium_indicus_pranii_MTCC_9506 10 10
Mycobacterium_intracellulare_MOTT-02 9 9
Mycobacterium_avium_subsp._paratuberculosis_MAP4 7 7
Mycobacterium_avium_subsp._paratuberculosis_K-10 6 6
Mycobacterium_canettii_CIPT_140070017 6 6
Mycobacterium_canettii_CIPT_140060008 6 6
Mycobacterium_canettii_CIPT_140070008 6 6
Mycobacterium_canettii_CIPT_140070010 6 6
Mycobacterium_tuberculosis_EAI5/NITR206 6 6
Mycobacterium_tuberculosis_EAI5 6 6
Mycobacterium_tuberculosis_CAS/NITR204 5 5
Mycobacterium_tuberculosis_str._Beijing/NITR203 6 6
Mycobacterium_tuberculosis_UT205 6 6
Mycobacterium_tuberculosis_RGTB423 5 5
Mycobacterium_tuberculosis_RGTB327 6 6
Mycobacterium_tuberculosis_CTRI-2 6 6
Mycobacterium_tuberculosis_str._Erdman_=_ATCC_35801 6 6
Mycobacterium_tuberculosis_KZN_605 6 6
Mycobacterium_tuberculosis_KZN_4207 6 6
Mycobacterium_tuberculosis_CCDC5180 6 6
Mycobacterium_tuberculosis_CCDC5079 6 6
Mycobacterium_tuberculosis_CCDC5079 6 6
Mycobacterium_tuberculosis_H37Ra 6 6
Mycobacterium_tuberculosis_str._Haarlem/NITR202 3 3
Mycobacterium_tuberculosis_str._Haarlem 6 6
Mycobacterium_tuberculosis_F11 6 6
Mycobacterium_tuberculosis_H37Rv 6 6
Mycobacterium_tuberculosis_CDC1551 6 6
Mycobacterium_bovis_AF2122/97 6 6
Mycobacterium_bovis_BCG_str._Korea_1168P 6 6
Mycobacterium_bovis_BCG_str._Mexico 6 6
Mycobacterium_bovis_BCG_str._Tokyo_172 6 6
Mycobacterium_gilvum_Spyr1 6 6
Mycobacterium_smegmatis_str._MC2_155 13 13
Mycobacterium_leprae_TN 2 2
Mycobacterium_kansasii_ATCC_12478 7 7
Corynebacterium_maris_DSM_45190 2 2
Corynebacterium_halotolerans_YIM_70093_=_DSM_44683 2 2
Corynebacterium_terpenotabidum_Y-11 2 2
Corynebacterium_ulcerans_BR-AD22 2 2
Corynebacterium_ulcerans_809 2 2
Corynebacterium_urealyticum_DSM_7111 1 1
Corynebacterium_callunae_DSM_20147 1 1
Corynebacterium_pseudotuberculosis_258 2 2
Corynebacterium_pseudotuberculosis_Cp162 2 2
Corynebacterium_pseudotuberculosis_P54B96 2 2
Corynebacterium_pseudotuberculosis_267 2 2
Corynebacterium_pseudotuberculosis_1/06-A 2 2
Corynebacterium_pseudotuberculosis_42/02-A 2 2
Corynebacterium_pseudotuberculosis_3/99-5 2 2
Corynebacterium_pseudotuberculosis_31 2 2
Corynebacterium_pseudotuberculosis_CIP_52.97 2 2
Corynebacterium_pseudotuberculosis_PAT10 2 2
Corynebacterium_pseudotuberculosis_I19 2 2
Corynebacterium_pseudotuberculosis_FRC41 2 2
Corynebacterium_pseudotuberculosis_C231 2 2
Corynebacterium_pseudotuberculosis_1002 2 2
Corynebacterium_glutamicum_MB001 1 1
Corynebacterium_glutamicum_SCgG2 1 1
Corynebacterium_glutamicum_SCgG1 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_glutamicum_ATCC_13032 1 1
Corynebacterium_diphtheriae_BH8 2 2
Corynebacterium_diphtheriae_INCA_402 2 2
Corynebacterium_diphtheriae_VA01 2 2
Corynebacterium_diphtheriae_HC04 2 2
Corynebacterium_diphtheriae_HC03 2 2
Corynebacterium_diphtheriae_HC02 2 2
Corynebacterium_diphtheriae_HC01 2 2
Corynebacterium_diphtheriae_241 2 2
Corynebacterium_diphtheriae_CDCE_8392 2 2
Corynebacterium_diphtheriae_PW8 2 2
Corynebacterium_diphtheriae_C7_(beta) 2 2
Corynebacterium_diphtheriae_31A 2 2
Clavibacter_michiganensis_subsp._sepedonicus 1 1
Clavibacter_michiganensis_subsp._nebraskensis_NCPPB_2581 2 2
Chthonomonas_calidirosea_T49 24 24
Deinococcus_peraridilitoris_DSM_19664 1 1
Erysipelothrix_rhusiopathiae_SY1027 1 1
[Clostridium]_stercorarium_Clostridiu_subsp._stercorarium_DSM_8532 1 1
Faecalibacterium_prausnitzii_L2-6 2 2
Clostridium_difficile_BI1 1 1
Clostridium_difficile_R20291 1 1
Clostridium_difficile_CD196 1 1
Clostridium_saccharolyticum_Clostridium_cf._saccharolyticum_K10 1 1
Coprococcus_catus_GD/7 1 1
Clostridium_saccharoperbutylacetonicum_N1-4(HMT) 2 2
Clostridium_perfringens_SM101 1 1
Clostridium_perfringens_str._13 1 1
Clostridium_pasteurianum_BC1 3 3
Clostridium_botulinum_BKT015925 2 2
Clostridium_acetobutylicum_DSM_1731 1 1
Clostridium_acetobutylicum_EA_2018 1 1
Halobacteroides_halobius_DSM_5150 1 1
Lactobacillus_salivarius_UCC118 1 1
Lactobacillus_brevis_KB290 2 2
Streptococcus_constellatus_subsp._pharyngis_C1050 1 1
Streptococcus_constellatus_subsp._pharyngis_C818 1 1
Streptococcus_constellatus_subsp._pharyngis_C232 1 1
Streptococcus_intermedius_B196 1 1
Streptococcus_intermedius_C270 1 1
Streptococcus_anginosus_C1051 1 1
Streptococcus_equi_subsp._zooepidemicus_ATCC_35246 1 1
Streptococcus_equi_subsp._zooepidemicus_MGCS10565 1 1
Streptococcus_equi_subsp._zooepidemicus 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_167 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_AC-2713 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_ATCC_12394 1 1
Streptococcus_dysgalactiae_subsp._equisimilis_RE378 1 1
Streptococcus_oligofermentans_AS_1.3089 2 2
Streptococcus_iniae_SF1 1 1
Streptococcus_parasanguinis_FW213 2 2
Streptococcus_pyogenes_MGAS10750 1 1
Streptococcus_pyogenes_MGAS8232 1 1
Streptococcus_pneumoniae_A026 3 3
Streptococcus_pneumoniae_ST556 3 3
Streptococcus_pneumoniae_SPNA45 3 3
Streptococcus_pneumoniae_SPN994039 3 3
Streptococcus_pneumoniae_SPN994038 3 3
Streptococcus_pneumoniae_SPN034183 3 3
Streptococcus_pneumoniae_SPN034156 3 3
Streptococcus_pneumoniae_INV104 4 4
Streptococcus_pneumoniae_INV200 4 4
Streptococcus_pneumoniae_OXC141 3 3
Streptococcus_pneumoniae_gamPNI0373 3 3
Streptococcus_pneumoniae_AP200 4 4
Streptococcus_pneumoniae_ATCC_700669 4 4
Streptococcus_pneumoniae_TCH8431/19A 3 3
Streptococcus_pneumoniae_CGSP14 4 4
Streptococcus_pneumoniae_G54 4 4
Streptococcus_pneumoniae_JJA 4 4
Streptococcus_pneumoniae_70585 3 3
Streptococcus_pneumoniae_Hungary19A-6 5 5
Streptococcus_pneumoniae_Taiwan19F-14 3 3
Streptococcus_pneumoniae_D39 3 3
Streptococcus_pneumoniae_670-6B 4 4
Streptococcus_pneumoniae_R6 3 3
Streptococcus_pneumoniae_TIGR4 4 4
Streptococcus_agalactiae_ILRI112 2 2
Streptococcus_agalactiae_ILRI005 2 2
Streptococcus_agalactiae_09mas018883 2 2
Streptococcus_agalactiae_2-22 2 2
Streptococcus_agalactiae_SA20-06 1 1
Streptococcus_agalactiae_GD201008-001 2 2
Streptococcus_agalactiae_NEM316 2 2
Streptococcus_agalactiae_2603V/R 2 2
Streptococcus_mutans_GS-5 1 1
Streptococcus_mutans_LJ23 1 1
Streptococcus_mutans_UA159 1 1
Streptococcus_thermophilus_MN-ZLW-002 1 1
Streptococcus_thermophilus_JIM_8232 1 1
Streptococcus_thermophilus_ND03 1 1
Streptococcus_thermophilus_CNRZ1066 1 1
Streptococcus_thermophilus_LMG_18311 1 1
Streptococcus_suis_T15 1 1
Streptococcus_suis_TL13 1 1
Streptococcus_suis_SC070731 1 1
Streptococcus_suis_S735 1 1
Streptococcus_suis_ST3 1 1
Streptococcus_suis_D9 1 1
Streptococcus_suis_SS12 1 1
Streptococcus_suis_D12 1 1
Streptococcus_suis_ST1 1 1
Streptococcus_suis_A7 2 2
Streptococcus_suis_BM407 1 1
Streptococcus_suis_SC84 1 1
Streptococcus_suis_GZ1 1 1
Streptococcus_suis_98HAH33 1 1
Streptococcus_suis_05ZYH33 1 1
Streptococcus_salivarius_CCHSS3 1 1
Streptococcus_salivarius_JIM8777 1 1
Paenibacillus_sp._Y412MC10 10 10
Paenibacillus_mucilaginosus_KNP414 8 8
Paenibacillus_mucilaginosus_K02 9 9
Paenibacillus_larvae_subsp._larvae_DSM_25430 2 2
Paenibacillus_polymyxa_SC2 1 1
Geobacillus_sp._Y4.1MC1 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_sequencing 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5033 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_AS43.3 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_YAU_B9601-Y2 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5113 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_UCMB5036 1 1
Bacillus_amyloliquefaciens_subsp._plantarum_CAU_B946 1 1
Bacillus_amyloliquefaciens_LFB112 1 1
Bacillus_amyloliquefaciens_CC178 1 1
Bacillus_amyloliquefaciens_Y2 1 1
Bacillus_amyloliquefaciens_IT-45 1 1
Bacillus_subtilis_PY79 1 1
Bacillus_subtilis_QB928 1 1
Bacillus_subtilis_subsp._subtilis_6051-HGW 1 1
Bacillus_toyonensis_BCT-7112 1 1
Bacillus_thuringiensis_MC28 1 1
Bacillus_cereus_G9842 1 1
Bacillus_cereus_E33L 1 1
Bacillus_cereus_ATCC_14579 1 1
Bacillus_megaterium_QM_B1551 2 2
Staphylococcus_pseudintermedius_ED99 1 1
Salinibacter_ruber_DSM_13855 1 1
Rhodothermus_marinus_SG0.5JP17-172 1 1
Echinicola_vietnamensis_DSM_17526 4 4
Emticicia_oligotrophica_DSM_17448 7 7
Prevotella_dentalis_DSM_3688 2 2
Alistipes_shahii_WAL_8301 1 1
Bacteroides_xylanisolvens_XB1A 3 3
Bacteroides_fragilis_638R 1 1
Bacteroides_fragilis_NCTC_9343 1 1
Nonlabens_dokdonensis_DSW-6 11 11
Psychroflexus_torquis_ATCC_700755 3 3
Singulisphaera_acidiphila_DSM_18658 5 5
Leptospira_borgpetersenii_serovar_Hardjo-bovis_str._JB197 1 1
Leptospira_interrogans_serovar_Lai_str._56601 2 2
Leptospira_interrogans_serovar_Copenhageni_str._Fiocruz_L1-130 2 2
Leptospira_biflexa_serovar_Patoc_strain_'Patoc_1_(Ames)' 4 4
Brachyspira_pilosicoli_WesB 1 1
Brachyspira_pilosicoli_B2904 1 1
Brachyspira_pilosicoli_P43/6/78 1 1
Leptospirillum_ferriphilum_ML-04 1 1
Fusobacterium_nucleatum_subsp._vincentii_3_1_36A2 1 1
Fusobacterium_nucleatum_subsp._animalis_4_8 1 1
Acidithiobacillus_ferrooxidans_ATCC_23270 1 1
Bdellovibrio_exovorus_JSS 8 8
Bdellovibrio_bacteriovorus_str._Tiberius 6 6
Arcobacter_butzleri_7h1h 3 3
Arcobacter_butzleri_ED-1 2 2
Campylobacter_jejuni_Waterborne_C.jejuni_Outbreak 1 1
Campylobacter_jejuni_RM1221 1 1
Campylobacter_jejuni_subsp._jejuni_00-2544 1 1
Campylobacter_jejuni_subsp._jejuni_00-2538 1 1
Campylobacter_jejuni_subsp._jejuni_00-2426 1 1
Campylobacter_jejuni_subsp._jejuni_00-2425 1 1
Campylobacter_jejuni_subsp._jejuni_PT14 1 1
Campylobacter_jejuni_subsp._jejuni_ICDCCJ07001 1 1
Campylobacter_jejuni_subsp._jejuni_S3 1 1
Campylobacter_jejuni_subsp._jejuni_M1 1 1
Campylobacter_jejuni_subsp._jejuni_IA3902 1 1
Campylobacter_jejuni_subsp._jejuni_81116 1 1
Campylobacter_jejuni_subsp._jejuni_81-176 1 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168-BN148 1 1
Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 1 1
Campylobacter_coli_76339 1 1
Campylobacter_coli_15-537360 1 1
Campylobacter_coli_CVM_N29710 2 2
Helicobacter_cetorum_MIT_99-5656 1 1
Helicobacter_pylori_BM012S 1 1
Helicobacter_pylori_BM012A 1 1
Helicobacter_pylori_SouthAfrica20 1 1
Helicobacter_pylori_UM298 1 1
Helicobacter_pylori_UM066 1 1
Helicobacter_pylori_UM037 1 1
Helicobacter_pylori_UM299 1 1
Helicobacter_pylori_UM032 1 1
Helicobacter_pylori_OK310 2 2
Helicobacter_pylori_OK113 1 1
Helicobacter_pylori_Rif2 1 1
Helicobacter_pylori_Rif1 1 1
Helicobacter_pylori_HUP-B14 1 1
Helicobacter_pylori_PeCan18 1 1
Helicobacter_pylori_Shi169 1 1
Helicobacter_pylori_Shi112 1 1
Helicobacter_pylori_Shi417 1 1
Helicobacter_pylori_XZ274 2 2
Helicobacter_pylori_Aklavik86 1 1
Helicobacter_pylori_Aklavik117 2 2
Helicobacter_pylori_SNT49 1 1
Helicobacter_pylori_Puno135 2 2
Helicobacter_pylori_Puno120 2 2
Helicobacter_pylori_ELS37 1 1
Helicobacter_pylori_Gambia94/24 1 1
Helicobacter_pylori_SouthAfrica7 1 1
Helicobacter_pylori_India7 1 1
Helicobacter_pylori_Lithuania75 2 2
Helicobacter_pylori_2017 1 1
Helicobacter_pylori_2018 1 1
Helicobacter_pylori_908 1 1
Helicobacter_pylori_F57 1 1
Helicobacter_pylori_F30 1 1
Helicobacter_pylori_F16 1 1
Helicobacter_pylori_Sat464 1 1
Helicobacter_pylori_Cuz20 1 1
Helicobacter_pylori_PeCan4 1 1
Helicobacter_pylori_SJM180 1 1
Helicobacter_pylori_B8 1 1
Helicobacter_pylori_52 1 1
Helicobacter_pylori_v225d 1 1
Helicobacter_pylori_83 3 3
Helicobacter_pylori_35A 2 2
Helicobacter_pylori_P12 1 1
Helicobacter_pylori_G27 1 1
Helicobacter_pylori_Shi470 1 1
Helicobacter_pylori_HPAG1 1 1
Helicobacter_pylori_51 1 1
Helicobacter_pylori_F32 1 1
Helicobacter_pylori_J99 1 1
Helicobacter_pylori_26695 1 1
Helicobacter_pylori_26695 1 1
Lawsonia_intracellularis_N343 1 1
Desulfovibrio_vulgaris_RCH1 1 1
Desulfovibrio_vulgaris_str._'Miyazaki_F' 1 1
Desulfovibrio_vulgaris_str._Hildenborough 1 1
Desulfovibrio_desulfuricans_ND132 1 1
Sorangium_cellulosum_So0157-2 26 26
Anaeromyxobacter_sp._K 2 2
Anaeromyxobacter_dehalogenans_2CP-C 2 2
Myxococcus_stipitatus_DSM_14675 17 17
Neisseria_meningitidis_WUE_2594 2 2
Neisseria_meningitidis_G2136 3 3
Neisseria_meningitidis_M04-240196 2 2
Neisseria_meningitidis_M01-240149 2 2
Neisseria_meningitidis_NZ-05/33 2 2
Neisseria_meningitidis_M01-240355 4 4
Neisseria_meningitidis_8013 4 4
Neisseria_meningitidis_053442 4 4
Neisseria_meningitidis_Z2491 2 2
Neisseria_meningitidis_H44/76 2 2
Neisseria_meningitidis_alpha710 2 2
Neisseria_meningitidis_MC58 2 2
Neisseria_gonorrhoeae_TCDC-NG08107 2 2
Neisseria_gonorrhoeae_FA_1090 2 2
Burkholderia_phenoliruptrix_BR3459a 13 13
Pandoraea_pnomenusa_3kgm 9 9
Ralstonia_pickettii_12J 10 10
Ralstonia_solanacearum_FQY_4 7 7
Ralstonia_solanacearum_Po82 7 7
Ralstonia_solanacearum_PSI07 12 12
Ralstonia_solanacearum_CMR15 9 9
Ralstonia_solanacearum_GMI1000 8 8
Polynucleobacter_necessarius_subsp._necessarius_STIR1 1 1
Burkholderia_sp._YI23 18 18
Burkholderia_sp._CCGE1003 13 13
Burkholderia_sp._CCGE1001 11 11
Burkholderia_sp._KJ006 13 13
Burkholderia_thailandensis_MSMB121 20 20
Burkholderia_pseudomallei_MSHR305 27 27
Burkholderia_pseudomallei_NCTC_13179 27 27
Burkholderia_pseudomallei_BPC006 26 26
Burkholderia_pseudomallei_1026b 27 27
Burkholderia_pseudomallei_MSHR346 6 6
Burkholderia_pseudomallei_668 26 26
Burkholderia_pseudomallei_1710b 27 27
Burkholderia_pseudomallei_K96243 28 28
Burkholderia_mallei_NCTC_10229 18 18
Burkholderia_mallei_NCTC_10247 17 17
Burkholderia_mallei_ATCC_23344 17 17
Burkholderia_lata 22 22
Burkholderia_ambifaria_MC40-6 16 16
Burkholderia_cenocepacia_MC0-3 21 21
Burkholderia_cenocepacia_AU_1054 20 20
Burkholderia_cenocepacia_J2315 20 20
Burkholderia_multivorans_ATCC_17616 16 16
Burkholderia_cepacia_GG4 15 15
Alicycliphilus_denitrificans_BC 3 3
Variovorax_paradoxus_B4 20 20
Variovorax_paradoxus_EPS 12 12
Taylorella_asinigenitalis_14/45 1 1
Taylorella_equigenitalis_14/56 1 1
Taylorella_equigenitalis_ATCC_35865 1 1
Bordetella_pertussis_CS 8 8
Bordetella_parapertussis_18323 7 7
Bordetella_parapertussis_Bpp5 8 8
Bordetella_bronchiseptica_MO149 10 10
Bordetella_bronchiseptica_253 10 10
Achromobacter_xylosoxidans_NBRC_15126_=_ATCC_27061 11 11
Nitrosomonas_sp._AL212 1 1
Sulfuricella_denitrificans_skB26 2 2
Caulobacter_crescentus_CB15 4 4
Phaeobacter_gallaeciensis_DSM_17395 6 6
Phaeobacter_gallaeciensis_DSM_26640 8 8
Leisingera_methylohalidivorans_DSM_14336 8 8
Octadecabacter_antarcticus_307 11 11
Octadecabacter_arcticus_238 12 12
Rhodobacter_sphaeroides_ATCC_17025 1 1
Paracoccus_aminophilus_JCM_7686 3 3
Magnetospirillum_gryphiswaldense_MSR-1_v2 2 2
Rhodospirillum_rubrum_ATCC_11170 2 2
Gluconacetobacter_diazotrophicus_PAl_5 4 4
Gluconobacter_oxydans_H24 6 6
Acetobacter_pasteurianus_386B 6 6
Acetobacter_pasteurianus_IFO_3283-12 6 6
Acetobacter_pasteurianus_IFO_3283-01-42C 6 6
Acetobacter_pasteurianus_IFO_3283-32 6 6
Acetobacter_pasteurianus_IFO_3283-26 6 6
Acetobacter_pasteurianus_IFO_3283-22 6 6
Acetobacter_pasteurianus_IFO_3283-07 6 6
Acetobacter_pasteurianus_IFO_3283-03 6 6
Micavibrio_aeruginosavorus_EPB 1 1
Candidatus_Pelagibacter_ubique_HTCC1062 3 3
Wolbachia_endosymbiont_of_Drosophila_melanogaster 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wHa 1 1
Wolbachia_endosymbiont_of_Drosophila_simulans_wNo 1 1
Rickettsia_bellii_RML369-C 2 2
Methylobacterium_extorquens_DM4 4 4
Methylobacterium_extorquens_PA1 2 2
Brucella_ceti_TE10759-12 2 2
Brucella_ceti_TE28753-12 2 2
Brucella_canis_HSK_A52141 3 3
Brucella_suis_VBI22 1 1
Brucella_suis_1330 1 1
Brucella_suis_1330 1 1
Brucella_melitensis_NI 3 3
Brucella_melitensis_M5-90 3 3
Brucella_melitensis_M28 3 3
Brucella_melitensis_bv._1_str._16M 3 3
Brucella_abortus_A13334 3 3
Brucella_melitensis_biovar_Abortus_2308 1 1
Brucella_abortus_bv._1_str._9-941 1 1
Sinorhizobium_fredii_USDA_257 2 2
Sinorhizobium_fredii_HH103 2 2
Sinorhizobium_meliloti_2011 6 6
Sinorhizobium_meliloti_GR4 4 4
Sinorhizobium_meliloti_Rm41 4 4
Sinorhizobium_meliloti_SM11 5 5
Sinorhizobium_meliloti_BL225C 4 4
Sinorhizobium_meliloti_1021 5 5
Rhizobium_etli_CFN_42 5 5
Rhizobium_etli_bv._mimosae_str._Mim1 6 6
Rhizobium_tropici_CIAT_899 10 10
Rhizobium_leguminosarum_bv._trifolii_WSM2304 6 6
Rhizobium_leguminosarum_bv._trifolii_WSM1325 9 9
Mesorhizobium_australicum_WSM2073 12 12
Hyphomicrobium_nitrativorans_NL23 1 1
Oligotropha_carboxidovorans_OM5 3 3
Oligotropha_carboxidovorans_OM5 3 3
Rhodopseudomonas_palustris_DX-1 4 4
Rhodopseudomonas_palustris_TIE-1 5 5
Rhodopseudomonas_palustris_HaA2 3 3
Rhodopseudomonas_palustris_BisB5 2 2
Rhodopseudomonas_palustris_BisB18 4 4
Rhodopseudomonas_palustris_CGA009 5 5
Bradyrhizobium_sp._S23321 5 5
Bradyrhizobium_sp._BTAi1 16 16
Bradyrhizobium_oligotrophicum_S58 15 15
Bradyrhizobium_japonicum_USDA_6 12 12
Simiduia_agarivorans_SA1_=_DSM_21679 6 6
Mannheimia_succiniciproducens_MBEL55E 4 4
Bibersteinia_trehalosi_USDA-ARS-USMARC-192 3 3
Aggregatibacter_actinomycetemcomitans_ANH9381 3 3
Aggregatibacter_actinomycetemcomitans_D11S-1 3 3
Haemophilus_somnus_2336 1 1
Mannheimia_haemolytica_USMARC_2286 6 6
Mannheimia_haemolytica_M42548 6 6
Mannheimia_haemolytica_D174 4 4
Mannheimia_haemolytica_D171 4 4
Mannheimia_haemolytica_D153 4 4
Mannheimia_haemolytica_USDA-ARS-USMARC-183 6 6
Mannheimia_haemolytica_USDA-ARS-USMARC-185 6 6
Pasteurella_multocida_36950 4 4
Pasteurella_multocida_subsp._multocida_str._HN06 4 4
Pasteurella_multocida_subsp._multocida_str._Pm70 4 4
Haemophilus_parasuis_ZJ0906 3 3
Haemophilus_influenzae_KR494 3 3
Haemophilus_influenzae_F3047 4 4
Haemophilus_influenzae_F3031 4 4
Haemophilus_influenzae_10810 3 3
Haemophilus_influenzae_PittGG 2 2
Haemophilus_influenzae_86-028NP 3 3
Haemophilus_influenzae_R2866 3 3
Haemophilus_influenzae_R2846 3 3
Haemophilus_influenzae_Rd_KW20 3 3
Actinobacillus_suis_H91-0380 3 3
Actinobacillus_pleuropneumoniae_serovar_3_str._JL03 4 4
Actinobacillus_pleuropneumoniae_serovar_7_str._AP76 5 5
Aeromonas_hydrophila_ML09-119 8 8
Vibrio_fischeri_ES114 6 6
Vibrio_sp._EJY3 8 8
Vibrio_parahaemolyticus_BB22OP 4 4
Vibrio_alginolyticus_NBRC_15630_=_ATCC_17749 4 4
Vibrio_anguillarum_Listonella_anguillarum_M3 2 2
Vibrio_nigripulchritudo_VibrioScope 12 12
Vibrio_vulnificus_CMCP6 6 6
Vibrio_vulnificus_YJ016 6 6
Vibrio_cholerae_LMA3984-4 4 4
Vibrio_cholerae_M66-2 4 4
Vibrio_cholerae_O395 4 4
Vibrio_cholerae_IEC224 4 4
Vibrio_cholerae_O1_str._2010EL-1786 4 4
Vibrio_cholerae_MJ-1236 4 4
Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 4 4
Idiomarina_loihiensis_GSL_199 4 4
Shewanella_sp._W3-18-1 8 8
Shewanella_sp._ANA-3 8 8
Shewanella_baltica_BA175 11 11
Shewanella_baltica_OS678 11 11
Shewanella_baltica_OS117 11 11
Shewanella_baltica_OS223 9 9
Shewanella_baltica_OS195 11 11
Shewanella_baltica_OS155 11 11
Shewanella_sp._MR-7 5 5
Shewanella_putrefaciens_200 9 9
Glaciecola_psychrophila_170 11 11
Alteromonas_macleodii_str._'Ionian_Sea_UM4b' 6 6
Alteromonas_macleodii_str._'Ionian_Sea_UM7' 11 11
Alteromonas_macleodii_str._'Ionian_Sea_U8' 10 10
Alteromonas_macleodii_str._'Ionian_Sea_U7' 10 10
Alteromonas_macleodii_str._'Ionian_Sea_U4' 10 10
Alteromonas_macleodii_str._'Aegean_Sea_MED64' 5 5
Alteromonas_macleodii_str._'English_Channel_615' 7 7
Alteromonas_macleodii_AltDE1 11 11
Alteromonas_macleodii_str._'English_Channel_673' 5 5
Alteromonas_macleodii_str._'Balearic_Sea_AD45' 5 5
Alteromonas_macleodii_str._'Black_Sea_11' 6 6
Alteromonas_macleodii_ATCC_27126 7 7
Alcanivorax_dieselolei_B5 9 9
Thalassolituus_oleivorans_MIL-1 5 5
Stenotrophomonas_maltophilia_D457 6 6
Stenotrophomonas_maltophilia_JV3 4 4
Stenotrophomonas_maltophilia_R551-3 6 6
Xylella_fastidiosa_subsp._fastidiosa_GB514 4 4
Xylella_fastidiosa_M12 6 6
Xylella_fastidiosa_Temecula1 5 5
Xylella_fastidiosa_9a5c 5 5
Xanthomonas_citri_subsp._citri_Aw12879 9 9
Xanthomonas_campestris_pv._vesicatoria_str._85-10 9 9
Xanthomonas_axonopodis_pv._citrumelo_F1 9 9
Xanthomonas_axonopodis_Xac29-1 10 10
Xanthomonas_oryzae_pv._oryzicola_BLS256 8 8
Xanthomonas_oryzae_pv._oryzae_MAFF_311018 7 7
Xanthomonas_oryzae_pv._oryzae_KACC_10331 7 7
Xanthomonas_campestris_pv._raphani_756C 9 9
Xanthomonas_campestris_pv._campestris_str._8004 9 9
Xanthomonas_campestris_pv._campestris_str._ATCC_33913 9 9
Thioalkalivibrio_nitratireducens_DSM_14787 3 3
Thioflavicoccus_mobilis_8321 4 4
Legionella_pneumophila_str._Paris 11 11
Legionella_pneumophila_str._Lens 10 10
Legionella_pneumophila_subsp._pneumophila_LPE509 11 11
Legionella_pneumophila_subsp._pneumophila_str._Thunder_Bay 11 11
Legionella_pneumophila_subsp._pneumophila_str._Philadelphia_1 11 11
Legionella_pneumophila_subsp._pneumophila 12 12
Legionella_pneumophila_subsp._pneumophila 12 12
Legionella_pneumophila_subsp._pneumophila_ATCC_43290 11 11
Legionella_pneumophila_2300/99_Alcoy 10 10
Proteus_mirabilis_BB2000 4 4
Morganella_morganii_subsp._morganii_KT 8 8
Edwardsiella_tarda_C07-087 4 4
Edwardsiella_tarda_FL6-60 4 4
Rahnella_aquatilis_HX2 11 11
Yersinia_pseudotuberculosis_PB1/+ 9 9
Yersinia_pseudotuberculosis_YPIII 9 9
Yersinia_pseudotuberculosis_IP_32953 9 9
Yersinia_pestis_biovar_Microtus_str._91001 8 8
Yersinia_pestis_A1122 7 7
Yersinia_pestis_Z176003 7 7
Yersinia_pestis_D182038 8 8
Yersinia_pestis_D106004 8 8
Yersinia_pestis_biovar_Medievalis_str._Harbin_35 7 7
Yersinia_pestis_Nepal516 7 7
Yersinia_pestis_Antiqua 8 8
Yersinia_pestis_Angola 8 8
Yersinia_pestis_CO92 8 8
Yersinia_pestis_KIM10+ 9 9
Yersinia_enterocolitica_subsp._palearctica_105.5R(r) 11 11
Yersinia_enterocolitica_subsp._palearctica_Y11 11 11
Serratia_sp._AS13 15 15
Serratia_plymuthica_S13 15 15
Serratia_plymuthica_4Rx13 18 18
Serratia_marcescens_FGI94 9 9
Serratia_marcescens_WW4 15 15
Serratia_liquefaciens_ATCC_27592 16 16
Dickeya_dadantii_Ech586 12 12
Dickeya_dadantii_3937 12 12
Pectobacterium_carotovorum_subsp._carotovorum_PCC21 10 10
Pantoea_ananatis_LMG_5342 10 10
Pantoea_ananatis_PA13 11 11
Pantoea_ananatis_AJ13355 10 10
Erwinia_pyrifoliae_DSM_12163 4 4
Erwinia_amylovora_CFBP1430 6 6
Cronobacter_sakazakii_CMCC_45402 8 8
Cronobacter_sakazakii_SP291 9 9
Cronobacter_sakazakii_ATCC_BAA-894 10 10
Raoultella_ornithinolytica_B6 19 19
Shigella_sonnei_53G 11 11
Shigella_flexneri_2002017 10 10
Shigella_flexneri_2a_str._2457T 9 9
Shigella_flexneri_2a_str._301 9 9
Shigella_dysenteriae_1617 8 8
Shigella_boydii_Sb227 11 11
Salmonella_bongori_N268-08 9 9
Salmonella_enterica_subsp._arizonae_serovar_62:z4,z23:--_str._RSK2980 11 11
Salmonella_enterica_subsp._enterica_serovar_4,[5],12:i:-_str._08-1736 11 11
Salmonella_enterica_subsp._enterica_serovar_Javiana_str._CFSAN001992 10 10
Salmonella_enterica_subsp._enterica_serovar_Schwarzengrund_str._CVM19633 10 10
Salmonella_enterica_subsp._enterica_Serovar_Cubana_str._CFSAN002050 11 11
Salmonella_enterica_subsp._enterica_serovar_Enteritidis_str._P125109 11 11
Salmonella_enterica_subsp._enterica_serovar_Choleraesuis_str._SC-B67 10 10
Salmonella_enterica_subsp._enterica_serovar_Newport_str._USMARC-S3124.1 11 11
Salmonella_enterica_subsp._enterica_serovar_Newport_str._SL254 11 11
Salmonella_enterica_subsp._enterica_serovar_Dublin_str._CT_02021853 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_var._5-_str._CFSAN001921 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._U288 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._798 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._UK-1 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._ST4/74 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._T000240 11 11
Salmonella_enterica_The_genome_of__subsp._enterica_serovar_Typhimurium_str._DT2 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._D23580 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._SL1344 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhimurium_Definitive_Type_104 11 11
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._P-stx-12 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty21a 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._CT18 10 10
Salmonella_enterica_subsp._enterica_serovar_Typhi_str._Ty2 10 10
Salmonella_enterica_serovar_Bovismorbificans_genomics 11 11
Salmonella_enterica_subsp._enterica_serovar_Bareilly_str._CFSAN000189 11 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._24249 11 11
Salmonella_enterica_subsp._enterica_serovar_Agona_str._SL483 10 10
Salmonella_enterica_subsp._enterica_serovar_Weltevreden_str._2007-60-3289-1 10 10
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_B_str._SPB7 11 11
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._AKU_12601 10 10
Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A_str._ATCC_9150 10 10
Salmonella_enterica_subsp._enterica_Serovar_Heidelberg_str._CFSAN002069 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._B182 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._41578 11 11
Salmonella_enterica_subsp._enterica_serovar_Heidelberg_str._SL476 11 11
Salmonella_enterica_subsp._enterica_serovar_Pullorum_str._S06004 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._CDC1983-67 10 10
Salmonella_enterica_subsp._enterica_serovar_Gallinarum/pullorum_str._RKS5078 10 10
Salmonella_enterica_subsp._enterica_serovar_Thompson_str._RM6836 11 11
Salmonella_enterica_subsp._enterica_serovar_Gallinarum_str._287/91 11 11
Klebsiella_oxytoca_KCTC_1686 17 17
Klebsiella_pneumoniae_JM45 14 14
Klebsiella_pneumoniae_CG43 13 13
Klebsiella_pneumoniae_KCTC_2242 18 18
Klebsiella_pneumoniae_342 19 19
Klebsiella_pneumoniae_subsp._pneumoniae_1084 14 14
Klebsiella_pneumoniae_subsp._pneumoniae_HS11286 13 13
Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 15 15
Klebsiella_pneumoniae_subsp._rhinoscleromatis_SB3432 14 14
Enterobacter_aerogenes_EA1509E 15 15
Escherichia_coli_E24377A 10 10
Escherichia_coli_E._coli_PMV-1 11 11
Escherichia_coli_JJ1886 11 11
Escherichia_coli_LY180 11 11
Escherichia_coli_APEC_O78 11 11
Escherichia_coli_O7:K1_str._CE10 12 12
Escherichia_coli_O104:H4_str._2009EL-2050 11 11
Escherichia_coli_O104:H4_str._2009EL-2071 11 11
Escherichia_coli_O104:H4_str._2011C-3493 11 11
Escherichia_coli_NA114 11 11
Escherichia_coli_P12b 10 10
Escherichia_coli_str._'clone_D_i2' 11 11
Escherichia_coli_str._'clone_D_i14' 11 11
Escherichia_coli_UM146 11 11
Escherichia_coli_042 11 11
Escherichia_coli_Xuzhou21 10 10
Escherichia_coli_IHE3034 11 11
Escherichia_coli_UMNK88 11 11
Escherichia_coli_O83:H1_str._NRG_857C 11 11
Escherichia_coli_ABU_83972 10 10
Escherichia_coli_KO11FL 11 11
Escherichia_coli_KO11FL 11 11
Escherichia_coli_LF82 11 11
Escherichia_coli_ED1a 10 10
Escherichia_coli_IAI39 12 12
Escherichia_coli_UMN026 11 11
Escherichia_coli_55989 11 11
Escherichia_coli_S88 11 11
Escherichia_coli_IAI1 11 11
Escherichia_coli_W 11 11
Escherichia_coli_W 11 11
Escherichia_coli_DH1 11 11
Escherichia_coli_DH1 11 11
Escherichia_coli_ATCC_8739 10 10
Escherichia_coli_BL21(DE3) 10 10
Escherichia_coli_BL21(DE3) 10 10
Escherichia_coli_SMS-3-5 12 12
Escherichia_coli_SE15 11 11
Escherichia_coli_SE11 11 11
Escherichia_coli_APEC_O1 9 9
Escherichia_coli_O103:H2_str._12009 11 11
Escherichia_coli_UTI89 11 11
Escherichia_coli_536 10 10
Escherichia_coli_HS 11 11
Escherichia_coli_ETEC_H10407 11 11
Escherichia_coli_O55:H7_str._RM12579 10 10
Escherichia_coli_O55:H7_str._CB9615 10 10
Escherichia_coli_O26:H11_str._11368 11 11
Escherichia_coli_CFT073 11 11
Escherichia_coli_O111:H-_str._11128 11 11
Escherichia_coli_O127:H6_str._E2348/69 11 11
Escherichia_coli_O157:H7_str._TW14359 10 10
Escherichia_coli_O157:H7_str._EC4115 10 10
Escherichia_coli_O157:H7_str._Sakai 10 10
Escherichia_coli_O157:H7_str._EDL933 10 10
Escherichia_coli_str._K-12_substr._MDS42 9 9
Escherichia_coli_BW2952 11 11
Escherichia_coli_str._K-12_substr._MG1655 11 11
Escherichia_coli_str._K-12_substr._W3110 11 11
Escherichia_coli_str._K-12_substr._DH10B 11 11
Escherichia_coli_B_str._REL606 11 11
Enterobacter_cloacae_SCF1 12 12
Enterobacter_cloacae_EcWSU1 7 7
Enterobacter_cloacae_subsp._cloacae_ENHKU01 7 7
Enterobacter_cloacae_subsp._cloacae_NCTC_9394 10 10
Enterobacter_cloacae_subsp._cloacae_ATCC_13047 11 11
Azotobacter_vinelandii_CA6 20 20
Azotobacter_vinelandii_CA 20 20
Pseudomonas_denitrificans_ATCC_13867 13 13
Pseudomonas_syringae_pv._phaseolicola_1448A 12 12
Pseudomonas_syringae_pv._syringae_B728a 13 13
Pseudomonas_stutzeri_CCUG_29243 9 9
Pseudomonas_stutzeri_DSM_10701 8 8
Pseudomonas_stutzeri_DSM_4166 8 8
Pseudomonas_stutzeri_RCH2 7 7
Pseudomonas_stutzeri_ATCC_17588_=_LMG_11199 9 9
Pseudomonas_monteilii_SB3101 13 13
Pseudomonas_monteilii_SB3078 13 13
Pseudomonas_putida_H8234 12 12
Pseudomonas_putida_HB3267 17 17
Pseudomonas_putida_NBRC_14164 14 14
Pseudomonas_putida_DOT-T1E 12 12
Pseudomonas_putida_S16 13 13
Pseudomonas_putida_BIRD-1 12 12
Pseudomonas_putida_W619 17 17
Pseudomonas_putida_ND6 11 11
Pseudomonas_putida_KT2440 13 13
Pseudomonas_putida_GB-1 17 17
Pseudomonas_protegens_CHA0 16 16
Pseudomonas_poae_RE*1-1-14 9 9
Pseudomonas_fluorescens_F113 17 17
Pseudomonas_fluorescens_A506 9 9
Pseudomonas_fluorescens_R124 14 14
Pseudomonas_fluorescens_Pf0-1 16 16
Pseudomonas_resinovorans_NBRC_106553 12 12
Pseudomonas_mendocina_NK-01 10 10
Pseudomonas_aeruginosa_SCV20265 24 24
Pseudomonas_aeruginosa_MTB-1 18 18
Pseudomonas_aeruginosa_LES431 19 19
Pseudomonas_aeruginosa_RP73 17 17
Pseudomonas_aeruginosa_B136-33 18 18
Pseudomonas_aeruginosa_PA1R 23 23
Pseudomonas_aeruginosa_PA1 23 23
Pseudomonas_aeruginosa_DK2 16 16
Pseudomonas_aeruginosa_NCGM2.S1 18 18
Pseudomonas_aeruginosa_M18 22 22
Pseudomonas_aeruginosa_LESB58 19 19
Pseudomonas_aeruginosa_PA7 11 11
Pseudomonas_aeruginosa_PAO1 17 17
Acinetobacter_genomosp._13TU__RUH2624 6 6
Acinetobacter_sp.__SH024 9 9
Acinetobacter_calcoaceticus_ruh2202 10 10
Acinetobacter_baumannii_ZW85-1 5 5
Acinetobacter_baumannii_TYTH-1 4 4
Acinetobacter_baumannii_BJAB0868 5 5
Acinetobacter_baumannii_BJAB0715 5 5
Acinetobacter_baumannii_BJAB07104 5 5
Acinetobacter_baumannii_TCDC-AB0715 5 5
Acinetobacter_baumannii_D1279779 5 5
Acinetobacter_baumannii_MDR-TJ 5 5
Acinetobacter_baumannii_1656-2 4 4
Acinetobacter_baumannii__ATCC_19606 5 5
Acinetobacter_baumannii_AB307-0294 6 6
Acinetobacter_baumannii_AYE 6 6
Acinetobacter_baumannii_SDF 4 4
Acinetobacter_baumannii_MDR-ZJ06 5 5
Acinetobacter_baumannii_AB0057 6 6
Acinetobacter_baumannii_ACICU 5 5
Acinetobacter_radioresistens__SH164 7 7
Acinetobacter_junii__SH205 11 11
Acinetobacter_johnsonii__SH046 9 9
Acinetobacter_lwoffii__SH145 8 8
Methylophaga_sp._JAM7 4 4
Cycloclasticus_zancles_7-ME 2 2
Francisella_noatunensis_subsp._orientalis_LADL--07-285A 2 2
Francisella_tularensis_subsp._mediasiatica_FSC147 1 1
Francisella_tularensis_subsp._holarctica_F92 1 1
Francisella_tularensis_subsp._holarctica_FTNF002-00 1 1
Francisella_tularensis_subsp._holarctica_OSU18 1 1
Francisella_tularensis_subsp._holarctica_LVS 1 1
Francisella_tularensis_subsp._holarctica_FSC200 1 1
Francisella_tularensis_subsp._tularensis_TIGB03 1 1
Francisella_tularensis_subsp._tularensis_TI0902 1 1
Francisella_tularensis_subsp._tularensis_NE061598 1 1
Francisella_tularensis_subsp._tularensis_FSC198 1 1
Francisella_tularensis_subsp._tularensis_SCHU_S4 1 1
Francisella_cf._novicida_Fx1 1 1
Candidatus_Nitrosoarchaeum_koreensis_Candidatus_Nitrosopumilus_koreensis_AR1 1 1
Natronomonas_moolapensis_8.8.11 1 1

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Longest transcript per gene
Genome     Number   Proteins
Homo_sapiens_69_37   (Human)   49 49
Pan_troglodytes_69_2.1.4   (Chimpanzee)   47 47
Gorilla_gorilla_69_3.1   (Western gorilla)   44 44
Pongo_abelii_69_2   (Sumatran orangutan)   41 40
Nomascus_leucogenys_69_1.0   (Northern white-cheeked gibbon)   39 39
Macaca_mulatta_69_1   (Rhesus monkey)   44 44
Callithrix_jacchus_69_3.2.1   (White-tufted-ear marmoset)   44 44
Otolemur_garnettii_69_3   (Small-eared galago)   41 41
Microcebus_murinus_69_1   (Gray mouse lemur)   43 41
Rattus_norvegicus_69_3.4   (Norway rat)   43 42
Mus_musculus_69_38   (House mouse)   47 47
Dipodomys_ordii_69_1   (Ord's kangaroo rat)   42 39
Ictidomys_tridecemlineatus_69_2   (Thirteen-lined ground squirrel)   40 40
Cavia_porcellus_69_3   (Domestic guinea pig)   47 47
Oryctolagus_cuniculus_69_2   (Rabbit)   40 40
Ochotona_princeps_69   (American pika)   38 35
Tupaia_belangeri_69   (Northern tree shrew)   39 32
Sus_scrofa_69_10.2   (Pig)   53 53
Bos_taurus_69_3.1   (Cattle)   45 45
Vicugna_pacos_69_1   (Alpaca)   31 30
Tursiops_truncatus_69_1   (Bottlenose dolphin)   43 41
Mustela_putorius_furo_69_1.0   (Domestic ferret)   46 46
Ailuropoda_melanoleuca_69_1   (Giant panda)   46 46
Canis_familiaris_69_3.1   (Dog)   47 46
Felis_catus_69   (Domestic cat)   39 37
Equus_caballus_69_2   (Horse)   45 45
Myotis_lucifugus_69_2.0   (Little brown bat)   50 50
Pteropus_vampyrus_69_1   (Large flying fox)   42 40
Sorex_araneus_69_1   (European shrew)   26 25
Erinaceus_europaeus_69   (Western European hedgehog)   36 34
Procavia_capensis_69_1   (Cape rock hyrax)   38 35
Loxodonta_africana_69_3   (African savanna elephant)   45 44
Echinops_telfairi_69   (Small Madagascar hedgehog)   37 36
Dasypus_novemcinctus_69_2   (Nine-banded armadillo)   34 31
Choloepus_hoffmanni_69_1   (Hoffmann's two-fingered sloth)   33 29
Macropus_eugenii_69_1.0   (Tammar wallaby)   40 35
Sarcophilus_harrisii_69_7.0   (Tasmanian devil)   43 43
Monodelphis_domestica_69_5   (Gray short-tailed opossum)   40 40
Ornithorhynchus_anatinus_69_5   (Platypus)   38 38
Petromyzon_marinus_69_7.0   (Sea lamprey)   28 28
Meleagris_gallopavo_69_2   (Turkey)   34 34
Gallus_gallus_69_2   (Chicken)   36 36
Taeniopygia_guttata_69_3.2.4   (Zebra finch)   39 39
Pelodiscus_sinensis_69_1.0   (Chinese soft-shelled turtle)   40 40
Anolis_carolinensis_69_2.0   (Green anole)   37 36
Xenopus_tropicalis_69_4.2   (Tropical clawed frog)   46 46
Latimeria_chalumnae_69_1   (Coelacanth)   40 40
Gadus_morhua_69_1   (Atlantic cod)   43 43
Tetraodon_nigroviridis_69_8   (Spotted green pufferfish)   43 43
Takifugu_rubripes_69_4   (Torafugu)   46 46
Gasterosteus_aculeatus_69_1   (Three-spined stickleback)   45 45
Oryzias_latipes_69_1   (Japanese medaka)   46 46
Xiphophorus_maculatus_69_4.4.2   (Southern platyfish)   48 48
Oreochromis_niloticus_69_1.0   (Nile tilapia)   48 48
Danio_rerio_69_9   (Zebrafish)   51 51
Ciona_savignyi_69_2.0   (Pacific transparent sea squirt)   58 58
Ciona_intestinalis_69   (Vase tunicate)   69 69
Drosophila_melanogaster_69_5   (Fruit fly)   29 29
Caenorhabditis_elegans_69_215   (Roundworm)   26 26
Saccharomyces_cerevisiae_69_4   (Baker's yeast)   7 7
Arabidopsis_thaliana_10   (Thale cress)   145 145

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]

Others
Genome     Number   Proteins
Homo_sapiens_75_37_(old_version_GRC)   (Human)   199 199
Homo_sapiens__(NCBI_version)   (Human)   76 76
Mus_musculus_63_37__(longest_transcript_per_gene)_(Duplicate)   (House mouse)   47 47
Heliconius_numata__(Incomplete) 17 17
Loa_loa_v3.3_(Request)   (Eye worm)   16 16
Wuchereria_bancrofti_v1.0_(Request)   (Agent of lymphatic filariasis)   16 16
Brugia_malayi_v1.0_(Duplicate)   (Agent of lymphatic filariasis)   16 16
Moniliophthora_perniciosa_FA553__(Genome_survey) 45 45
Picea_sitchensis__(Incomplete)   (Sitka spruce)   37 37
Lotus_japonicus__(Early_assembly) 221 220
Malus_x_domestica_(Duplicate)   (Apple)   431 410
Ricinus_communis__(Early_assembly)   (Castor bean)   168 165
Nicotiana_benthamiana_0.4.4_(Early_draft) 306 287
Solanum_pimpinellifolium_A-1.0_(Early_draft)   (Currant tomato)   234 234
Solanum_lycopersicum_v2.3_(Early_assembly)   (Tomato)   236 236
Phoenix_dactylifera__(Early_draft)   (Date palm)   91 89
Mycobacterium_tuberculosis_H37Rv_(Duplicate_of_ex) 6 6
Vibrio_campbellii_ATCC_BAA-1116_(Duplicate_of_NC) 4 4
NCBI_plasmid_sequences_(Plasmids) 333 331
PDB_chains_(SCOP_1.75)_(PDB) 31 31
TargetDB__(Targets) 643 641
Protein_Data_Bank_(all_PDB_sequenc) 1463 1448
UniProt__viral_sequences_(Viral) 158 157
Protozoadb_2010_08_(Protozoadb) 219 214
SCOP2_SCOPe_CATH_ECOD_(all_domain_sequ) 2262 2262
STRING_v9.0.5_(STRING) 9627 9582
Uniprot_2018_03_genome 193323 192391
NCBI_viral_sequences_(Viral) 231 230
NCBI_2017_08_genome 623522 623189

Jump to [ Top of page · Domain combinations in groups of genomes · Domain combinations in individual genomes ]